Miyakogusa Predicted Gene

Lj4g3v2313680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2313680.1 Non Characterized Hit- tr|I1LPC6|I1LPC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56017
PE,53,2e-17,Porphobil_deam,Tetrapyrrole biosynthesis,
hydroxymethylbilane synthase;
PORPHOBILINOGEN_DEAM,Porphob,CUFF.50771.1
         (359 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g076600.1 | porphobilinogen deaminase | HC | chr4:29299820...   535   e-152

>Medtr4g076600.1 | porphobilinogen deaminase | HC |
           chr4:29299820-29303409 | 20130731
          Length = 369

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/345 (76%), Positives = 302/345 (87%), Gaps = 13/345 (3%)

Query: 14  PPFSTTRRRRLERVCLTKGEAGSVAVEQPQPTKEKVALLKIGTRGSLLALAQAYETRNKL 73
           PPFS  R R             SVAVEQ Q  + K A+++IGTRGS LALAQA+ETR+KL
Sbjct: 37  PPFSKCRIR------------ASVAVEQ-QTQQTKTAIIRIGTRGSPLALAQAHETRDKL 83

Query: 74  MSAHSELAEDGAIQIVIIKTTGDRIRTQPLADIGGKGLFTKEIDEALLNGQIDIAVHSMK 133
           +++H+ELAE+GAIQIVIIKTTGD+I +QPLADIGGKGLFTKEIDEAL+NG IDIAVHSMK
Sbjct: 84  IASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMK 143

Query: 134 DVPTYLPDKTILPCNLPREDVRDAFISFTAPSLAHLPHGSLVGTASLRRKSQILHKCPYL 193
           DVPTYLP+KTILPCNLPREDVRDAFIS +A SLA LP GS++GTASLRRKSQILH+ P L
Sbjct: 144 DVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYPSL 203

Query: 194 NVLENFRGNVDTRLTKLNEGVVQATILALAGLKRLNMTENVTSILSIEDMLPAVAQGAIG 253
           +V +NFRGNV TRL KL+EGVV+AT+LALAGLKRLNMTENVTS LSI+DMLPAVAQGAIG
Sbjct: 204 SVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMTENVTSTLSIDDMLPAVAQGAIG 263

Query: 254 IACRSNDHKMVEYIAALNHEETRLAVVCERAFLHILNGSCRTPIAGYASRNEDGDCLFRG 313
           IACRSND KM EY+A+LNHEETRLA+ CERAFL  L+GSCRTPIAGYASR++DG+CLFRG
Sbjct: 264 IACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSCRTPIAGYASRDKDGNCLFRG 323

Query: 314 LVASPDGTCVLETSRVGPYTVEDMIEMGKDAGKELLSQAGPNFFS 358
           LVASPDGT VLETSR+GPY  EDM++MG+DAG+ELLS+AGP FF+
Sbjct: 324 LVASPDGTRVLETSRIGPYAYEDMMKMGRDAGEELLSRAGPGFFN 368