Miyakogusa Predicted Gene

Lj4g3v2313680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2313680.1 Non Chatacterized Hit- tr|I1LPC6|I1LPC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56017
PE,53,2e-17,Porphobil_deam,Tetrapyrrole biosynthesis,
hydroxymethylbilane synthase;
PORPHOBILINOGEN_DEAM,Porphob,CUFF.50771.1
         (359 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08280.1 | Symbols: HEMC | hydroxymethylbilane synthase | chr...   508   e-144

>AT5G08280.1 | Symbols: HEMC | hydroxymethylbilane synthase |
           chr5:2663763-2665596 REVERSE LENGTH=382
          Length = 382

 Score =  508 bits (1307), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/321 (77%), Positives = 280/321 (87%), Gaps = 4/321 (1%)

Query: 37  VAVEQPQPTKEKVALLKIGTRGSLLALAQAYETRNKLMSAHSELAEDGAIQIVIIKTTGD 96
           VAVEQ    K + A+++IGTRGS LALAQAYETR KL   H EL EDGAI I IIKTTGD
Sbjct: 64  VAVEQ----KTRTAIIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 119

Query: 97  RIRTQPLADIGGKGLFTKEIDEALLNGQIDIAVHSMKDVPTYLPDKTILPCNLPREDVRD 156
           +I +QPLADIGGKGLFTKEIDEAL+NG IDIAVHSMKDVPTYLP+KTILPCNLPREDVRD
Sbjct: 120 KILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRD 179

Query: 157 AFISFTAPSLAHLPHGSLVGTASLRRKSQILHKCPYLNVLENFRGNVDTRLTKLNEGVVQ 216
           AFI  TA +LA LP GS+VGTASLRRKSQILHK P L+V ENFRGNV TRL+KL  G VQ
Sbjct: 180 AFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQ 239

Query: 217 ATILALAGLKRLNMTENVTSILSIEDMLPAVAQGAIGIACRSNDHKMVEYIAALNHEETR 276
           AT+LALAGLKRL+MTENV SILS+++MLPAVAQGAIGIACR++D KM  Y+A+LNHEETR
Sbjct: 240 ATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETR 299

Query: 277 LAVVCERAFLHILNGSCRTPIAGYASRNEDGDCLFRGLVASPDGTCVLETSRVGPYTVED 336
           LA+ CERAFL  L+GSCRTPIAGYAS++E+G+C+FRGLVASPDGT VLETSR GPY  ED
Sbjct: 300 LAISCERAFLETLDGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYED 359

Query: 337 MIEMGKDAGKELLSQAGPNFF 357
           M++MGKDAG+ELLS+AGP FF
Sbjct: 360 MVKMGKDAGQELLSRAGPGFF 380