Miyakogusa Predicted Gene
- Lj4g3v2313680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2313680.1 Non Chatacterized Hit- tr|I1LPC6|I1LPC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56017
PE,53,2e-17,Porphobil_deam,Tetrapyrrole biosynthesis,
hydroxymethylbilane synthase;
PORPHOBILINOGEN_DEAM,Porphob,CUFF.50771.1
(1083 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72216 similar to UniRef100_Q43082 Cluster: Porphobili... 2123 0.0
gnl|LJGI|TC64001 homologue to UniRef100_Q43082 Cluster: Porphobi... 963 0.0
gnl|LJGI|BW629120 similar to UniRef100_Q43082 Cluster: Porphobil... 690 0.0
gnl|LJGI|DC594099 homologue to UniRef100_Q43082 Cluster: Porphob... 174 7e-43
gnl|LJGI|AV775945 UniRef100_Q43082 Cluster: Porphobilinogen deam... 98 1e-19
>gnl|LJGI|TC72216 similar to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (84%)
Length = 1478
Score = 2123 bits (1071), Expect = 0.0
Identities = 1080/1083 (99%)
Strand = Plus / Plus
Query: 1 atggagaccgcggcggcattagcgttggcgttgccatatcctcctttctccacaaccaga 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggagaccgcggcggcaatagcgttggcgttgccatatcctcctttctccacaaccaga 144
Query: 61 agaaggagacttgaacgcgtttgcctcaccaagggtgaggcgggttctgttgctgttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agaaggagacttgaacgcgtttgcctcaccaagggtgaggcgggttctgttgctgttgag 204
Query: 121 caaccgcaaccaactaaggagaaggttgctctgctcaaaattggtaccagagggagtcta 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 caaccgcaaccaactaaggagaagattgctctgctcaaaattggtaccagagggagtcta 264
Query: 181 ttagctctagctcaggcttatgagactagaaacaaactcatgtcggcacactcggagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagctctagctcaggcttatgagactagaaacaaactcatgtcggcacactcggagctt 324
Query: 241 gctgaagatggggctattcagattgtcataataaaaacaacaggtgacaggatccgaacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctgaagatggggctattcagattgtcataataaaaacaacaggtgacaggatccgaacg 384
Query: 301 cagccacttgcagacattggcggcaaaggcttatttaccaaagaaatagatgaggccctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagccacttgcagacattggcggcaaaggcttatttaccaaagaaatagatgaggccctc 444
Query: 361 ttaaacggtcaaattgacattgctgtccattctatgaaggatgttcctacttatttacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaaacggtcaaattgacattgctgtccattctatgaaggatgttcctacttatttacct 504
Query: 421 gataaaacaattctaccatgcaaccttccgcgcgaggatgtaagagatgcatttatatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gataaaacaattctaccatgcaaccttccgcgcgaggatgtaagagatgcatttatatcc 564
Query: 481 ttcactgcaccttcgcttgctcatcttcctcatggaagtcttgttggtactgcttcacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcactgcaccttcgcttgctcatcttcctcatggaagtcttgttggtactgcttcacta 624
Query: 541 agacgaaagtctcagatactccacaaatgtccatacctaaatgtgctggaaaacttccgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agacgaaagtctcagatactccacaaatgtccatacctaaatgtgctggaaaacttccgt 684
Query: 601 ggcaatgtcgatacaaggttgacaaaactgaacgagggagttgtccaagctacaatattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggcaatgtcgatacaaggttgacaaaactgaacgagggagttgtccaagctacaatattg 744
Query: 661 gcattagctggtctaaaacgcttaaatatgacagaaaatgtgacttcgatcctctcaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcattagctggtctaaaacgcttaaatatgacagaaaatgtgacttcgatcctctcaatt 804
Query: 721 gaagatatgctgccagctgttgcccaaggcgcgattggaatagcatgtagaagtaatgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaagatatgctgccagctgttgcccaaggcgcgattggaatagcatgtagaagtaatgac 864
Query: 781 cataaaatggtggaatacattgctgcactgaatcatgaagaaacaaggctagcagtggtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 cataaaatggtggaatacattgctgcactgaatcatgaagaaacaaggctagcagtggtt 924
Query: 841 tgtgaaagggcattccttcatattttgaatgggtcttgccgcacccctattgcagggtat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 tgtgaaagggcattccttcatattttgaatgggtcttgccgcacccctattgcagggtat 984
Query: 901 gcttccagaaatgaagacggagattgcttgtttagaggattagttgcttctcctgatgga 960
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 985 gcttccagaaatgaagacggagattgcttgtttagaggattagttacttctcctgatgga 1044
Query: 961 acctgcgtgctggagacatctagggttggtccatacactgttgaagatatgattgagatg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 acctgcgtgctggagacatctagggttggtccatacactgttgaagatatgattgagatg 1104
Query: 1021 ggtaaggatgctggcaaagagcttctttctcaggctggacctaactttttcagcatttag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 ggtaaggatgctggcaaagagcttctttctcaggctggacctaactttttcagcatttag 1164
Query: 1081 caa 1083
|||
Sbjct: 1165 caa 1167
>gnl|LJGI|TC64001 homologue to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (85%)
Length = 1570
Score = 963 bits (486), Expect = 0.0
Identities = 825/938 (87%)
Strand = Plus / Plus
Query: 146 ttgctctgctcaaaattggtaccagagggagtctattagctctagctcaggcttatgaga 205
||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 245 ttgctctcatcaaaattggtaccagaggaagtccactagctctagctcaggcttatgaga 304
Query: 206 ctagaaacaaactcatgtcggcacactcggagcttgctgaagatggggctattcagattg 265
| ||| |||||||||| | ||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 305 ccagagacaaactcattgcatcacactcagagctagcggaagaaggggctattcagattg 364
Query: 266 tcataataaaaacaacaggtgacaggatccgaacgcagccacttgcagacattggcggca 325
| ||||| |||||||||||||||| || | |||| || |||||||| |||||||| |
Sbjct: 365 tgataattaaaacaacaggtgacaaaatactctcgcaaccgcttgcagatattggcggga 424
Query: 326 aaggcttatttaccaaagaaatagatgaggccctcttaaacggtcaaattgacattgctg 385
| ||||| || |||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 425 agggcttgttcaccaaagaaatagatgaggcgctcttaaacggtgaaattgacattgctg 484
Query: 386 tccattctatgaaggatgttcctacttatttacctgataaaacaattctaccatgcaacc 445
||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 485 tccattccatgaaggacgttcctacttacttacctgataaaacaattctaccgtgcaacc 544
Query: 446 ttccgcgcgaggatgtaagagatgcatttatatccttcactgcaccttcgcttgctcatc 505
||||||| |||||||| |||||||||||||||||||| | |||| ||||||| ||| |||
Sbjct: 545 ttccgcgtgaggatgttagagatgcatttatatccttgagtgcagcttcgctagctgatc 604
Query: 506 ttcctcatggaagtcttgttggtactgcttcactaagacgaaagtctcagatactccaca 565
|||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 605 ttcccgctggaagtgtcattggtactgcttcactaagacggaagtctcagatactccaca 664
Query: 566 aatgtccatacctaaatgtgctggaaaacttccgtggcaatgtcgatacaaggttgacaa 625
|| ||||| |||||||||| || || ||||| ||||||||| | || ||||||| ||
Sbjct: 665 gatatccatctctaaatgtgcaagataatttccggggcaatgtccaaaccaggttgaaaa 724
Query: 626 aactgaacgagggagttgtccaagctacaatattggcattagctggtctaaaacgcttaa 685
|||| || |||||||||||| |||||||| ||||||||||||| || || ||||| ||||
Sbjct: 725 aactcaatgagggagttgtcaaagctacactattggcattagccggactcaaacggttaa 784
Query: 686 atatgacagaaaatgtgacttcgatcctctcaattgaagatatgctgccagctgttgccc 745
|||||||||||||||| ||||| | |||||| |||||||| ||||| |||||||| ||||
Sbjct: 785 atatgacagaaaatgttacttcaaccctctcgattgaagaaatgcttccagctgtggccc 844
Query: 746 aaggcgcgattggaatagcatgtagaagtaatgaccataaaatggtggaatacattgctg 805
||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||
Sbjct: 845 aaggcgcgattggaatagcatgtagaagtgatgatgataaaatggcagaatacattgcat 904
Query: 806 cactgaatcatgaagaaacaaggctagcagtggtttgtgaaagggcattccttcatattt 865
|| |||| ||||||||||||||||| || ||||| ||||||||||| || |||| | ||
Sbjct: 905 cattgaaccatgaagaaacaaggctggctgtggtatgtgaaagggcctttcttctgactt 964
Query: 866 tgaatgggtcttgccgcacccctattgcagggtatgcttccagaaatgaagacggagatt 925
|| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||
Sbjct: 965 tggatgggtcttgccgcacccctattgcaggctatgcttccagaaacgaagacggaaatt 1024
Query: 926 gcttgtttagaggattagttgcttctcctgatggaacctgcgtgctggagacatctaggg 985
|||| ||||||||||| |||||||| || |||||||| | |||||||||||||||||||
Sbjct: 1025 gcttatttagaggattggttgcttccccggatggaactcgtgtgctggagacatctaggg 1084
Query: 986 ttggtccatacactgttgaagatatgattgagatgggtaaggatgctggcaaagagcttc 1045
|||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1085 ttggtccatatgctgttgaagatatgattgagatgggtaaggatgctggcaaggagcttc 1144
Query: 1046 tttctcaggctggacctaactttttcagcatttagcaa 1083
|||||| |||||||||||||||||||| | |||||||
Sbjct: 1145 tttctcgagctggacctaactttttcagtagttagcaa 1182
>gnl|LJGI|BW629120 similar to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (20%)
Length = 479
Score = 690 bits (348), Expect = 0.0
Identities = 357/360 (99%)
Strand = Plus / Plus
Query: 1 atggagaccgcggcggcattagcgttggcgttgccatatcctcctttctccacaaccaga 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atggagaccgcggcggcaatagcgttggcgttgccatatcctcctttctccacaaccaga 179
Query: 61 agaaggagacttgaacgcgtttgcctcaccaagggtgaggcgggttctgttgctgttgag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 180 agaaggagacttgaacgcgtttgcctcaccaagggtgaggcgggttctgttgctgttggg 239
Query: 121 caaccgcaaccaactaaggagaaggttgctctgctcaaaattggtaccagagggagtcta 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 240 caaccgcaaccaactaaggagaagattgctctgctcaaaattggtaccagagggagtcta 299
Query: 181 ttagctctagctcaggcttatgagactagaaacaaactcatgtcggcacactcggagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttagctctagctcaggcttatgagactagaaacaaactcatgtcggcacactcggagctt 359
Query: 241 gctgaagatggggctattcagattgtcataataaaaacaacaggtgacaggatccgaacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gctgaagatggggctattcagattgtcataataaaaacaacaggtgacaggatccgaacg 419
Query: 301 cagccacttgcagacattggcggcaaaggcttatttaccaaagaaatagatgaggccctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cagccacttgcagacattggcggcaaaggcttatttaccaaagaaatagatgaggccctc 479
>gnl|LJGI|DC594099 homologue to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (16%)
Length = 595
Score = 174 bits (88), Expect = 7e-43
Identities = 148/168 (88%)
Strand = Plus / Plus
Query: 595 ttccgtggcaatgtcgatacaaggttgacaaaactgaacgagggagttgtccaagctaca 654
||||| ||||||||| | || ||||||| |||||| || |||||||||||| ||||||||
Sbjct: 428 ttccggggcaatgtccaaaccaggttgaaaaaactcaatgagggagttgtcaaagctaca 487
Query: 655 atattggcattagctggtctaaaacgcttaaatatgacagaaaatgtgacttcgatcctc 714
||||||||||||| || || ||||| |||||||||||||||||||| ||||| | ||||
Sbjct: 488 ctattggcattagccggactcaaacggttaaatatgacagaaaatgttacttcaaccctc 547
Query: 715 tcaattgaagatatgctgccagctgttgcccaaggcgcgattggaata 762
|| |||||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 548 tcgattgaagaaatgcttccagctgtggcccaaggcgcgattggaata 595
>gnl|LJGI|AV775945 UniRef100_Q43082 Cluster: Porphobilinogen deaminase chloroplast
precursor; n=1; Pisum sativum|Rep: Porphobilinogen,
partial (2%)
Length = 383
Score = 97.6 bits (49), Expect = 1e-19
Identities = 99/113 (87%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 925 tgcttgtttagaggattagttgcttctcctga-tggaacctgcgtgctggagacatctag 983
||||| ||||||||||| |||||||| || || ||| || | ||||||||||||| |||
Sbjct: 383 tgcttatttagaggattggttgcttcccccgactgggactcgtgtgctggagacatttag 324
Query: 984 ggttggtcca-tacactgttgaagatatgattgagatgggtaaggatgctggc 1035
|||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct: 323 ggttggtccactatccttttgaagatatgattgagatgggtaaggatgctggc 271