Miyakogusa Predicted Gene

Lj4g3v2289250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2289250.1 gene.g56609.t1.1
         (115 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g120450.1 | DnaJ heat shock amine-terminal domain protein ...   177   2e-45
Medtr2g435450.1 | DnaJ heat shock amine-terminal domain protein ...   127   3e-30

>Medtr4g120450.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr4:49928235-49929352 | 20130731
          Length = 265

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 96/115 (83%), Gaps = 1/115 (0%)

Query: 1   MRERFKEEAKVVENCMRTNSMSRKESPLSNPVAYLQRSKSMHRFDKETPVFNPSDYLYQG 60
           +RERF EEAKVVENCMR NSMSR ESPL NP +YL RSKS HRF+KETPVFNPSDYLYQG
Sbjct: 150 IRERFNEEAKVVENCMRVNSMSRNESPLYNPDSYLHRSKS-HRFEKETPVFNPSDYLYQG 208

Query: 61  YPHLREHVFKNSSTFWYLQTTSMLHRHNRGAQHASPVFEGRARSTFASIYAFVPS 115
           YPH+R  + KN S FWYLQT+SMLH   RGAQH+SPVFE ++RS F + +AFVPS
Sbjct: 209 YPHMRGLINKNPSAFWYLQTSSMLHNEKRGAQHSSPVFEVKSRSMFTNQFAFVPS 263


>Medtr2g435450.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr2:13696496-13694958 | 20130731
          Length = 270

 Score =  127 bits (318), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 84/119 (70%), Gaps = 5/119 (4%)

Query: 1   MRERFKEEAKVVENCMRTNSMSRKESPLSNPVAY-LQRSKSMHRFDKETPVFNPSDYLYQ 59
           MRER KEEAKV+ENC+R NS+S++ESPL NP  Y L   KS HR +KE PVFNPS+Y YQ
Sbjct: 151 MRERLKEEAKVIENCLRKNSVSKRESPLYNPPMYHLHGDKSEHRVEKEIPVFNPSNYKYQ 210

Query: 60  GYPHLREHVFKNSSTFWYLQTTSMLHRHNRG---AQHASPVFEGRARSTFASIYAFVPS 115
            YP  R+H +KNS TFWYLQ  +M+ R+++G   A++ SPVFE ++ S     +  V S
Sbjct: 211 SYPRPRDHAYKNSKTFWYLQKENMV-RNDKGDAKAKYTSPVFEVKSSSMDTRKFTCVSS 268