Miyakogusa Predicted Gene
- Lj4g3v2289250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2289250.1 gene.g56609.t1.1
(115 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06778.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 64 3e-11
>AT3G06778.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr3:2140249-2141437 REVERSE LENGTH=229
Length = 229
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 12/88 (13%)
Query: 1 MRERFKEEAKVVENCMRTNS---MSRK--ESPLSNPVAYLQRSKSMHRFDKETPVFNPSD 55
+R++F+EE V+E C++TNS M + E+P PV + + +R +KE+PVFNPSD
Sbjct: 140 IRDKFREENMVIERCLKTNSAFFMGNRTNETP---PVYGIPK---QNRINKESPVFNPSD 193
Query: 56 YLYQGYPHLREHVFK-NSSTFWYLQTTS 82
Y GYPH+R VF N S+ W + T S
Sbjct: 194 YRLWGYPHVRNRVFDYNLSSDWNMFTRS 221