Miyakogusa Predicted Gene
- Lj4g3v2249050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2249050.1 tr|Q6PP98|Q6PP98_SOYBN Mitochondrial pyruvate
dehydrogenase kinase isoform 2 OS=Glycine max GN=Gma.5,86.47,0,ATPase
domain of HSP90 chaperone/DNA topoisomerase II/histidine
kinase,ATPase-like, ATP-binding doma,CUFF.50554.1
(260 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g21410.2 477 e-135
Glyma15g21410.1 477 e-135
Glyma09g09270.2 476 e-134
Glyma09g09270.1 476 e-134
Glyma17g04470.1 468 e-132
Glyma13g18020.1 450 e-127
Glyma17g04470.2 318 5e-87
Glyma14g15320.1 248 3e-66
>Glyma15g21410.2
Length = 369
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/266 (86%), Positives = 246/266 (92%), Gaps = 6/266 (2%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLK------IVYEDPDEIDQFLDRFYMSRI 54
+NDE++FTEMIKAIKVRHNNV+PTMA GVQQLK IVYED EI QFLDRFYMSRI
Sbjct: 104 VNDEQDFTEMIKAIKVRHNNVVPTMALGVQQLKKRMDPKIVYEDLVEIHQFLDRFYMSRI 163
Query: 55 GIRMRIGQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYG 114
GIRM IGQHVELHNP+P P+ VGYIHT +SPV+VA+NASEDARA+CCREYGSAPDVHIYG
Sbjct: 164 GIRMLIGQHVELHNPNPPPHVVGYIHTKMSPVEVARNASEDARAICCREYGSAPDVHIYG 223
Query: 115 DPDFTFPYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSDE 174
DPDFTFPYVPAHLHLMVFELVKNSLRAV+ERFMDSDKVAPP+RI+VADGIEDVTIKVSDE
Sbjct: 224 DPDFTFPYVPAHLHLMVFELVKNSLRAVQERFMDSDKVAPPIRIIVADGIEDVTIKVSDE 283
Query: 175 GGGIPRSGLPKIFTYVYSTAENPLDEHSEFGTADNVTMAGYGYGLPISRLYARYFGGDLQ 234
GGGI RSGLPKIFTY+YSTA NPLDEHS+ G DNVTMAGYGYGLPISRLYARYFGGDLQ
Sbjct: 284 GGGIARSGLPKIFTYLYSTARNPLDEHSDLGIGDNVTMAGYGYGLPISRLYARYFGGDLQ 343
Query: 235 VISMEGYGTDAYLHLCRLGDSQEPLP 260
+ISMEGYGTDAYLHL RLGDSQEPLP
Sbjct: 344 IISMEGYGTDAYLHLSRLGDSQEPLP 369
>Glyma15g21410.1
Length = 369
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/266 (86%), Positives = 246/266 (92%), Gaps = 6/266 (2%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLK------IVYEDPDEIDQFLDRFYMSRI 54
+NDE++FTEMIKAIKVRHNNV+PTMA GVQQLK IVYED EI QFLDRFYMSRI
Sbjct: 104 VNDEQDFTEMIKAIKVRHNNVVPTMALGVQQLKKRMDPKIVYEDLVEIHQFLDRFYMSRI 163
Query: 55 GIRMRIGQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYG 114
GIRM IGQHVELHNP+P P+ VGYIHT +SPV+VA+NASEDARA+CCREYGSAPDVHIYG
Sbjct: 164 GIRMLIGQHVELHNPNPPPHVVGYIHTKMSPVEVARNASEDARAICCREYGSAPDVHIYG 223
Query: 115 DPDFTFPYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSDE 174
DPDFTFPYVPAHLHLMVFELVKNSLRAV+ERFMDSDKVAPP+RI+VADGIEDVTIKVSDE
Sbjct: 224 DPDFTFPYVPAHLHLMVFELVKNSLRAVQERFMDSDKVAPPIRIIVADGIEDVTIKVSDE 283
Query: 175 GGGIPRSGLPKIFTYVYSTAENPLDEHSEFGTADNVTMAGYGYGLPISRLYARYFGGDLQ 234
GGGI RSGLPKIFTY+YSTA NPLDEHS+ G DNVTMAGYGYGLPISRLYARYFGGDLQ
Sbjct: 284 GGGIARSGLPKIFTYLYSTARNPLDEHSDLGIGDNVTMAGYGYGLPISRLYARYFGGDLQ 343
Query: 235 VISMEGYGTDAYLHLCRLGDSQEPLP 260
+ISMEGYGTDAYLHL RLGDSQEPLP
Sbjct: 344 IISMEGYGTDAYLHLSRLGDSQEPLP 369
>Glyma09g09270.2
Length = 369
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/266 (85%), Positives = 246/266 (92%), Gaps = 6/266 (2%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLK------IVYEDPDEIDQFLDRFYMSRI 54
+NDE+EFTEMIKAIKVRHNNV+PTMA GVQQLK IVYED EI QFLDRFYMSRI
Sbjct: 104 VNDEREFTEMIKAIKVRHNNVVPTMAMGVQQLKKGMDPKIVYEDLVEIHQFLDRFYMSRI 163
Query: 55 GIRMRIGQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYG 114
GIRM IGQHVELHNP+P P+ VGYIHT +SPV+VA+NASEDAR++CCREYGSAPDVHIYG
Sbjct: 164 GIRMLIGQHVELHNPNPPPHVVGYIHTKMSPVEVARNASEDARSICCREYGSAPDVHIYG 223
Query: 115 DPDFTFPYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSDE 174
DP+FTFPYVPAHLHLMVFELVKNSLRAV+ERFM+SDKVAPP+RI+VADGIEDVTIKVSDE
Sbjct: 224 DPNFTFPYVPAHLHLMVFELVKNSLRAVQERFMNSDKVAPPIRIIVADGIEDVTIKVSDE 283
Query: 175 GGGIPRSGLPKIFTYVYSTAENPLDEHSEFGTADNVTMAGYGYGLPISRLYARYFGGDLQ 234
GGGI RSGLPKIFTY+YSTA NPLDEHS+ G DNVTMAGYGYGLPISRLYARYFGGDLQ
Sbjct: 284 GGGIARSGLPKIFTYLYSTARNPLDEHSDLGIGDNVTMAGYGYGLPISRLYARYFGGDLQ 343
Query: 235 VISMEGYGTDAYLHLCRLGDSQEPLP 260
+ISMEGYGTDAYLHL RLGDSQEPLP
Sbjct: 344 IISMEGYGTDAYLHLSRLGDSQEPLP 369
>Glyma09g09270.1
Length = 369
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/266 (85%), Positives = 246/266 (92%), Gaps = 6/266 (2%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLK------IVYEDPDEIDQFLDRFYMSRI 54
+NDE+EFTEMIKAIKVRHNNV+PTMA GVQQLK IVYED EI QFLDRFYMSRI
Sbjct: 104 VNDEREFTEMIKAIKVRHNNVVPTMAMGVQQLKKGMDPKIVYEDLVEIHQFLDRFYMSRI 163
Query: 55 GIRMRIGQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYG 114
GIRM IGQHVELHNP+P P+ VGYIHT +SPV+VA+NASEDAR++CCREYGSAPDVHIYG
Sbjct: 164 GIRMLIGQHVELHNPNPPPHVVGYIHTKMSPVEVARNASEDARSICCREYGSAPDVHIYG 223
Query: 115 DPDFTFPYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSDE 174
DP+FTFPYVPAHLHLMVFELVKNSLRAV+ERFM+SDKVAPP+RI+VADGIEDVTIKVSDE
Sbjct: 224 DPNFTFPYVPAHLHLMVFELVKNSLRAVQERFMNSDKVAPPIRIIVADGIEDVTIKVSDE 283
Query: 175 GGGIPRSGLPKIFTYVYSTAENPLDEHSEFGTADNVTMAGYGYGLPISRLYARYFGGDLQ 234
GGGI RSGLPKIFTY+YSTA NPLDEHS+ G DNVTMAGYGYGLPISRLYARYFGGDLQ
Sbjct: 284 GGGIARSGLPKIFTYLYSTARNPLDEHSDLGIGDNVTMAGYGYGLPISRLYARYFGGDLQ 343
Query: 235 VISMEGYGTDAYLHLCRLGDSQEPLP 260
+ISMEGYGTDAYLHL RLGDSQEPLP
Sbjct: 344 IISMEGYGTDAYLHLSRLGDSQEPLP 369
>Glyma17g04470.1
Length = 367
Score = 468 bits (1203), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/263 (85%), Positives = 245/263 (93%), Gaps = 3/263 (1%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLKIVYEDPDEIDQFLDRFYMSRIGIRMRI 60
MNDEKEFTE+IKAIKVRHNNV+PTMA GVQQLK V+EDPDEID+FLDRFYMSRIGIRM I
Sbjct: 105 MNDEKEFTELIKAIKVRHNNVVPTMALGVQQLKNVFEDPDEIDEFLDRFYMSRIGIRMLI 164
Query: 61 GQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYGDPDFTF 120
GQHVELHNP+P PNCVGYIHT++SPV+VA+NASEDAR+MC REYGSA +V IYGDPDFTF
Sbjct: 165 GQHVELHNPNPPPNCVGYIHTNMSPVNVARNASEDARSMCYREYGSAAEVRIYGDPDFTF 224
Query: 121 PYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSDEGGGIPR 180
PYVPAHLHLMVFELVKNSLRAV+ERFMDSD+VAPP+RI++ADGIEDVTIKVSDEGGGIPR
Sbjct: 225 PYVPAHLHLMVFELVKNSLRAVQERFMDSDEVAPPIRIIIADGIEDVTIKVSDEGGGIPR 284
Query: 181 SGLPKIFTYVYSTAENPLD---EHSEFGTADNVTMAGYGYGLPISRLYARYFGGDLQVIS 237
SGLP+IFTY+YSTA+N E S+ GT +NVTMAGYGYGLPI RLYARYFGGDLQVIS
Sbjct: 285 SGLPRIFTYLYSTAKNSSSVEHEPSDIGTMENVTMAGYGYGLPICRLYARYFGGDLQVIS 344
Query: 238 MEGYGTDAYLHLCRLGDSQEPLP 260
MEGYGTDAYLHL RLGDSQEPLP
Sbjct: 345 MEGYGTDAYLHLSRLGDSQEPLP 367
>Glyma13g18020.1
Length = 394
Score = 450 bits (1157), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/265 (82%), Positives = 240/265 (90%), Gaps = 5/265 (1%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLKIVYEDPDEIDQFLDRFYMSRIGIRMRI 60
MNDEKEFTE+IK+IKVRHNNV+PTMA GVQQLK V+EDPDEID+FLDR YMSRIGIRM I
Sbjct: 130 MNDEKEFTELIKSIKVRHNNVVPTMALGVQQLKNVFEDPDEIDEFLDRIYMSRIGIRMLI 189
Query: 61 GQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYGDPDFTF 120
GQHVELHNP+P PNCVGYIHT++SPV+VA+NASEDAR+MC EYGSA DV IYGDPDFTF
Sbjct: 190 GQHVELHNPNPPPNCVGYIHTNMSPVNVARNASEDARSMCYGEYGSAADVRIYGDPDFTF 249
Query: 121 PYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSDEGGGIPR 180
PYVPAHLHLM FELVKNSLRAV++ FMDSD+VAPP+RI++ADGIEDVTIKVSDEGGGIPR
Sbjct: 250 PYVPAHLHLMFFELVKNSLRAVQDHFMDSDEVAPPIRIIIADGIEDVTIKVSDEGGGIPR 309
Query: 181 SGLPKIFTYVYSTAENPL---DEHSEFGTADNVT--MAGYGYGLPISRLYARYFGGDLQV 235
SGLPKIFTY+YSTA N +E S+ GT DN++ MAG GYGLPI RLYARYFGGDLQV
Sbjct: 310 SGLPKIFTYLYSTARNASWDENEPSDLGTTDNISVKMAGNGYGLPICRLYARYFGGDLQV 369
Query: 236 ISMEGYGTDAYLHLCRLGDSQEPLP 260
ISMEGYGTDAYLHL RLGDSQEPLP
Sbjct: 370 ISMEGYGTDAYLHLSRLGDSQEPLP 394
>Glyma17g04470.2
Length = 280
Score = 318 bits (814), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 149/172 (86%), Positives = 165/172 (95%)
Query: 1 MNDEKEFTEMIKAIKVRHNNVIPTMASGVQQLKIVYEDPDEIDQFLDRFYMSRIGIRMRI 60
MNDEKEFTE+IKAIKVRHNNV+PTMA GVQQLK V+EDPDEID+FLDRFYMSRIGIRM I
Sbjct: 105 MNDEKEFTELIKAIKVRHNNVVPTMALGVQQLKNVFEDPDEIDEFLDRFYMSRIGIRMLI 164
Query: 61 GQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIYGDPDFTF 120
GQHVELHNP+P PNCVGYIHT++SPV+VA+NASEDAR+MC REYGSA +V IYGDPDFTF
Sbjct: 165 GQHVELHNPNPPPNCVGYIHTNMSPVNVARNASEDARSMCYREYGSAAEVRIYGDPDFTF 224
Query: 121 PYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVS 172
PYVPAHLHLMVFELVKNSLRAV+ERFMDSD+VAPP+RI++ADGIEDVTIKVS
Sbjct: 225 PYVPAHLHLMVFELVKNSLRAVQERFMDSDEVAPPIRIIIADGIEDVTIKVS 276
>Glyma14g15320.1
Length = 195
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/189 (68%), Positives = 146/189 (77%), Gaps = 20/189 (10%)
Query: 54 IGIRMRIGQHVELHNPHPLPNCVGYIHTHLSPVDVAKNASEDARAMCCREYGSAPDVHIY 113
+GIRM I QHVEL+NP+P PNCVGYIHT++SP++VA+NA A
Sbjct: 24 LGIRMLIWQHVELYNPNPPPNCVGYIHTNMSPMNVARNAMPQMFAFT------------- 70
Query: 114 GDPDFTFPYVPAHLHLMVFELVKNSLRAVEERFMDSDKVAPPVRIVVADGIEDVTIKVSD 173
G FP HLHLMVFELVKNSLRAV+ERFMDSD+VAPP+RI++ADGIEDVTIKVSD
Sbjct: 71 GILILLFP----HLHLMVFELVKNSLRAVQERFMDSDEVAPPIRIIIADGIEDVTIKVSD 126
Query: 174 EGGGIPRSGLPKIFTYVYSTAENPLD---EHSEFGTADNVTMAGYGYGLPISRLYARYFG 230
EGGGIPRSGLP+IFTY+YSTA L E S+ GT +NVTMAGYGYGLPI RLYARYFG
Sbjct: 127 EGGGIPRSGLPRIFTYLYSTAGISLSVEHELSDIGTMENVTMAGYGYGLPICRLYARYFG 186
Query: 231 GDLQVISME 239
GDLQVISME
Sbjct: 187 GDLQVISME 195