Miyakogusa Predicted Gene
- Lj4g3v2227920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2227920.1 tr|G7ILW7|G7ILW7_MEDTR ABC transporter B family
member OS=Medicago truncatula GN=MTR_2g018350 PE=3
S,32.89,0.00000000008,ABC transporter transmembrane region,ABC
transporter, transmembrane domain, type 1; ABC_TM1F,ABC
tra,CUFF.50724.1
(164 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 | chr1:524134-5... 203 5e-53
AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 | chr1:529836-5... 202 1e-52
AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding c... 197 4e-51
AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 | chr4:7807... 196 5e-51
AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755... 196 7e-51
AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790... 192 8e-50
AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-... 167 2e-42
AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192-... 166 7e-42
AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPG... 104 3e-23
AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 | chr3:10611071... 97 4e-21
AT3G28345.1 | Symbols: | ABC transporter family protein | chr3:... 96 8e-21
AT3G28415.1 | Symbols: | ABC transporter family protein | chr3:... 94 4e-20
AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 | chr3:10629425... 94 5e-20
AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 | chr3:10623742... 93 6e-20
AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 | chr1:9733597-... 92 2e-19
AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein ... 89 1e-18
AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassett... 86 1e-17
AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-1... 84 3e-17
AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 | chr2:16478249-1... 80 4e-16
AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 | chr3:2050739... 80 6e-16
AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 | chr1:3538470-... 75 2e-14
AT1G70610.1 | Symbols: ATTAP1, TAP1 | transporter associated wit... 48 3e-06
>AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 |
chr1:524134-528745 FORWARD LENGTH=1278
Length = 1278
Score = 203 bits (516), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 121/163 (74%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
P+FG+L+S++I F++P HEL++DS+ WA++F+ LGV SLI P++ Y F VAGGKLI+R
Sbjct: 725 PLFGILISRVIEAFFKPAHELKRDSRFWAIIFVALGVTSLIVSPTQMYLFAVAGGKLIRR 784
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
IR MCFEKAVHME++WFDE ++SSG +GARLS DA +R LVGDAL L V+N+++A +GL
Sbjct: 785 IRSMCFEKAVHMEVAWFDEPQNSSGTMGARLSADATLIRALVGDALSLAVQNVASAASGL 844
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF ASW+ NG+ KF+KGF+ DAK Y
Sbjct: 845 IIAFTASWELALIILVMLPLIGINGFVQVKFMKGFSADAKSKY 887
>AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 |
chr1:529836-534542 FORWARD LENGTH=1273
Length = 1273
Score = 202 bits (513), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 121/163 (74%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
P+FG+L+S++I F++P +L+KDS+ WA++F+ LGV SLI PS+ Y F VAGGKLI+R
Sbjct: 720 PLFGILISRVIEAFFKPADQLKKDSRFWAIIFVALGVTSLIVSPSQMYLFAVAGGKLIRR 779
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
I+ MCFEKAVHME+SWFDE E+SSG +GARLSTDAA +R LVGDAL L V+N ++A +GL
Sbjct: 780 IQSMCFEKAVHMEVSWFDEPENSSGTMGARLSTDAALIRALVGDALSLAVQNAASAASGL 839
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF ASW+ NG+ KF+KGF+ DAK Y
Sbjct: 840 IIAFTASWELALIILVMLPLIGINGFLQVKFMKGFSADAKSKY 882
>AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding
cassette subfamily B4 | chr2:19310008-19314750 REVERSE
LENGTH=1286
Length = 1286
Score = 197 bits (500), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 121/164 (73%)
Query: 1 MPIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
+PIFG+L+S +I F++PP +L++D+ WA++F+ LG AS+IA P++ +FF +AG KL++
Sbjct: 734 LPIFGILISSVIKAFFQPPKKLKEDTSFWAIIFMVLGFASIIAYPAQTFFFAIAGCKLVQ 793
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR MCFEK VHME+ WFDE E+SSG IGARLS DAA++RGLVGD+L V+N+S+ +AG
Sbjct: 794 RIRSMCFEKVVHMEVGWFDEPENSSGTIGARLSADAATIRGLVGDSLAQTVQNLSSILAG 853
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
L+IAF A WQ NG+ + KF+KGF+ DAK Y
Sbjct: 854 LIIAFLACWQLAFVVLAMLPLIALNGFLYMKFMKGFSADAKKMY 897
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 2 PIFGLLLSKMITIFYE-PPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
P+ LL +I F E + K SKV AL F+ LG+ + A + + ++G +
Sbjct: 78 PLMTLLFGDLIDAFGENQTNTTDKVSKV-ALKFVWLGIGTFAAAFLQLSGWMISGERQAA 136
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR + + + +I++FD + ++G + R+S D ++ +G+ +G ++ ++ + G
Sbjct: 137 RIRSLYLKTILRQDIAFFD-IDTNTGEVVGRMSGDTVLIQDAMGEKVGKAIQLLATFVGG 195
Query: 121 LVIAFQASW 129
VIAF W
Sbjct: 196 FVIAFVRGW 204
>AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 |
chr4:780734-785329 REVERSE LENGTH=1229
Length = 1229
Score = 196 bits (498), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 119/163 (73%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
PIFG+L +K+I F++PPH++++DS+ W+++F+ LGVASLI P Y F VAGG+LI+R
Sbjct: 677 PIFGILFAKVIEAFFKPPHDMKRDSRFWSMIFVLLGVASLIVYPMHTYLFAVAGGRLIQR 736
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
IR MCFEK VHME+ WFD+ E+SSG IG+RLS DAA ++ LVGD+L L V+N +AA++GL
Sbjct: 737 IRVMCFEKVVHMEVGWFDDPENSSGTIGSRLSADAALIKTLVGDSLSLSVKNAAAAVSGL 796
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF ASW+ NGY KF+KGFT DAK Y
Sbjct: 797 IIAFTASWKLAVIILVMIPLIGINGYLQIKFIKGFTADAKAKY 839
>AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 |
chr3:23008755-23013579 REVERSE LENGTH=1296
Length = 1296
Score = 196 bits (497), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 119/164 (72%)
Query: 1 MPIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
+PIFG+L+S +I F++PP +L+ D++ WA++F+ LGVAS++ P++ FF +AG KL++
Sbjct: 744 LPIFGILISSVIKAFFKPPEQLKSDTRFWAIIFMLLGVASMVVFPAQTIFFSIAGCKLVQ 803
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR MCFEK V ME+ WFDE E+SSGAIGARLS DAA+VRGLVGDAL V+N+++ AG
Sbjct: 804 RIRSMCFEKVVRMEVGWFDETENSSGAIGARLSADAATVRGLVGDALAQTVQNLASVTAG 863
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
LVIAF ASWQ NGY + KF+ GF+ DAK Y
Sbjct: 864 LVIAFVASWQLAFIVLAMLPLIGLNGYIYMKFMVGFSADAKRMY 907
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVW--ALVFLGLGVASLIAVPSKFYFFGVAGGKLI 59
PI +L +I +F + + K+ AL F+ LG+ +L+A + + ++G +
Sbjct: 95 PIMTILFGDVIDVFGQNQNSSDVSDKIAKVALKFVYLGLGTLVAALLQVSGWMISGERQA 154
Query: 60 KRIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIA 119
RIR + + + +I++FD E ++G + R+S D ++ +G+ +G ++ +S I
Sbjct: 155 GRIRSLYLQTILRQDIAFFD-VETNTGEVVGRMSGDTVLIQDAMGEKVGKAIQLVSTFIG 213
Query: 120 GLVIAFQASW 129
G VIAF W
Sbjct: 214 GFVIAFTEGW 223
>AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790447
REVERSE LENGTH=1230
Length = 1230
Score = 192 bits (488), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 118/163 (72%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
PIFG+L +K+I F++ PHEL++DS+ W+++F+ LGVA++I P+ Y F +AGG+LI+R
Sbjct: 678 PIFGILFAKVIEAFFKAPHELKRDSRFWSMIFVLLGVAAVIVYPTTNYLFAIAGGRLIRR 737
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
IR MCFEK VHME+ WFDE +SSGA+GARLS DAA +R LVGD+L L V+N+++ + GL
Sbjct: 738 IRSMCFEKVVHMEVGWFDEPGNSSGAMGARLSADAALIRTLVGDSLCLSVKNVASLVTGL 797
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF ASW+ NGY KF+KGF+ DAK Y
Sbjct: 798 IIAFTASWEVAIIILVIIPFIGINGYIQIKFMKGFSADAKAKY 840
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 2 PIFGLLLSKMITIFYEPPHE---LRKDSKV-WALVFLGLGVASLIAVPSKFYFFGVAGGK 57
P+ LL ++I + + + SKV +LV+LGLG +L A + + + G +
Sbjct: 45 PLMTLLFGELIDAMGPNQNNEEIVERVSKVCLSLVYLGLG--ALGAAFLQVACWMITGER 102
Query: 58 LIKRIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAA 117
RIR + + + +I +FD E ++G + R+S D + +G+ +G ++ IS
Sbjct: 103 QAARIRSLYLKTILRQDIGFFD-VEMTTGEVVGRMSGDTVLILDAMGEKVGKFIQLISTF 161
Query: 118 IAGLVIAFQASW 129
+ G VIAF W
Sbjct: 162 VGGFVIAFLRGW 173
>AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 |
chr4:10022205-10027280 FORWARD LENGTH=1236
Length = 1236
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 100/163 (61%), Gaps = 15/163 (9%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
PIFGLLLS I +FYEP L+KDS WAL+++ LG+ + + +P + YFFG+AGGKLIKR
Sbjct: 701 PIFGLLLSSSINMFYEPAKILKKDSHFWALIYIALGLTNFVMIPVQNYFFGIAGGKLIKR 760
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
IR MCF+K VH EISWFD D A+ R LVGDAL L+V+NI+ GL
Sbjct: 761 IRSMCFDKVVHQEISWFD---------------DTANSRSLVGDALALIVQNIATVTTGL 805
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF A+W GYA KFL GF+ DAK Y
Sbjct: 806 IIAFTANWILALIVLALSPFIVIQGYAQTKFLTGFSADAKAMY 848
>AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 |
chr5:18877192-18882347 REVERSE LENGTH=1248
Length = 1248
Score = 166 bits (420), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 108/163 (66%)
Query: 2 PIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
P+ GLLLS+ I IF+EP ++L+ DS WAL+F+ LG+ LI +P + Y F +AG KLIKR
Sbjct: 698 PVQGLLLSRTIRIFFEPSNKLKNDSLFWALIFVALGLTDLIVIPLQNYLFAIAGAKLIKR 757
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
IR + F++ +H +ISWFD+ ++SSG IGARLSTDA++V+ +VGD LGL+++N++ I
Sbjct: 758 IRSLSFDRVLHQDISWFDDTKNSSGVIGARLSTDASTVKSIVGDVLGLIMQNMATIIGAF 817
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF A+W GY KF+ GF A+ Y
Sbjct: 818 IIAFTANWLLALMALLVAPVMFFQGYYQIKFITGFGAKARGKY 860
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 2 PIFGLLLSKMITIF--YEPPHELRKDSKVWALVFLGL----GVASLIAVPSKFYFFGVAG 55
P +L+ ++I +F + H ++ SKV A+ FL L GV S + V + V G
Sbjct: 50 PFMSILMGQLINVFGFSDHDHVFKEVSKV-AVKFLYLAAYAGVVSFLQVSC----WMVTG 104
Query: 56 GKLIKRIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENIS 115
+ RIR++ + + +I +FD E ++G + R+S D ++ +G+ +G + +S
Sbjct: 105 ERQSTRIRRLYLKTILRQDIGFFD-TETNTGEVIGRMSGDTILIQDSMGEKVGKFTQLVS 163
Query: 116 AAIAGLVIAF 125
+ + G +AF
Sbjct: 164 SFVGGFTVAF 173
>AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1,
ATPGP19, ABCB19, ATABCB19 | ATP binding cassette
subfamily B19 | chr3:10870287-10877286 REVERSE
LENGTH=1252
Length = 1252
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Query: 2 PIFGLLLSKMITIFYEPPHE-LRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
P F +++S MI +FY ++ + + +K + +++G G+ ++ A + YFF + G L
Sbjct: 702 PTFAIVMSNMIEVFYYTDYDSMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTT 761
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
R+R+M + E+ WFDE EH+S I ARL+TDAA V+ + + + ++++N+++ +
Sbjct: 762 RVRRMMLSAILRNEVGWFDEDEHNSSLIAARLATDAADVKSAIAERISVILQNMTSLLTS 821
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDA 160
++AF W+ +A LKGF GD
Sbjct: 822 FIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDT 861
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 1 MPIFGLLLSKMITIFYEPP---HELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGK 57
MP+F LL +M+ F + H++ + ++L F+ LG+ + ++ + +G +
Sbjct: 55 MPVFFLLFGQMVNGFGKNQMDLHQMVHEVSRYSLYFVYLGLVVCFSSYAEIACWMYSGER 114
Query: 58 LIKRIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAA 117
+ +RK E + ++ +FD + +G I +STD V+ + + +G + +S
Sbjct: 115 QVAALRKKYLEAVLKQDVGFFD-TDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTF 173
Query: 118 IAGLVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+AGLV+ F ++W+ G +A L G T ++ Y
Sbjct: 174 LAGLVVGFVSAWKLALLSVAVIPGIAFAGGLYAYTLTGITSKSRESY 220
>AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 |
chr3:10611071-10616301 REVERSE LENGTH=1228
Length = 1228
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Query: 2 PIFGLLLSKMITIFYEPPHE-LRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
PI+ MI++F+ HE ++++++++ L+F GL + + S+ Y F G L K
Sbjct: 673 PIYAYSSGLMISVFFLTNHEQIKENTRIYVLLFFGLALFTFFTSISQQYSFSYMGEYLTK 732
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR+ K + E++WFDE E+SSGAI +RL+ DA VR LVG+ + LLV+ IS +
Sbjct: 733 RIREQMLSKILTFEVNWFDEEENSSGAICSRLAKDANVVRSLVGERMSLLVQTISTVMVA 792
Query: 121 LVIAFQASWQ 130
I +W+
Sbjct: 793 CTIGLVIAWR 802
>AT3G28345.1 | Symbols: | ABC transporter family protein |
chr3:10593921-10598775 REVERSE LENGTH=1240
Length = 1240
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Query: 1 MPIFGLLLSKMITIFYEPPH-ELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLI 59
P + L M+++++ H E+++ ++++AL F+GL V S + S+ Y F G L
Sbjct: 686 QPAYAYSLGSMVSVYFLTSHDEIKEKTRIYALSFVGLAVLSFLINISQHYNFAYMGEYLT 745
Query: 60 KRIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIA 119
KRIR+ K + E+ WFD E+SSGAI +RL+ DA VR LVGD + L+V+ +SA
Sbjct: 746 KRIRERMLSKVLTFEVGWFDRDENSSGAICSRLAKDANVVRSLVGDRMALVVQTVSAVTI 805
Query: 120 GLVIAFQASWQ 130
+ +W+
Sbjct: 806 AFTMGLVIAWR 816
>AT3G28415.1 | Symbols: | ABC transporter family protein |
chr3:10647123-10651540 REVERSE LENGTH=1221
Length = 1221
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Query: 2 PIFGLLLSKMITIFYEPPH-ELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
PI+ M+++++ H E+++ ++++ L+F+GL V + + Y F G L K
Sbjct: 668 PIYAYASGSMVSVYFLTSHDEMKEKTRIYVLLFVGLAVLCFLISIIQQYSFAYMGEYLTK 727
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR+ K + E+SWFDE E+SSG+I +RL+ DA VR LVG+ + LLV+ ISA
Sbjct: 728 RIRENILSKLLTFEVSWFDEDENSSGSICSRLAKDANVVRSLVGERVSLLVQTISAVSVA 787
Query: 121 LVIAFQASWQ 130
+ SW+
Sbjct: 788 CTLGLAISWK 797
>AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 |
chr3:10629425-10633967 REVERSE LENGTH=1225
Length = 1225
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Query: 2 PIFGLLLSKMITIFYEPPH-ELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
PI+ M+++++ H ++++ ++++ L+F+GL + + ++ S+ Y F G L K
Sbjct: 672 PIYSYSSGSMVSVYFLASHDQIKEKTRIYVLLFVGLALFTFLSNISQHYGFAYMGEYLTK 731
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR+ K + E++WFD+ E+SSGAI +RL+ DA VR LVGD + LLV+ ISA
Sbjct: 732 RIRERMLGKILTFEVNWFDKDENSSGAICSRLAKDANMVRSLVGDRMSLLVQTISAVSIT 791
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDA 160
I SW+ Y LK + +A
Sbjct: 792 CAIGLVISWRFSIVMMSVQPVIVVCFYTQRVLLKSMSRNA 831
>AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 |
chr3:10623742-10628201 REVERSE LENGTH=1240
Length = 1240
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 2 PIFGLLLSKMITIFYEPPH-ELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
P+ +I++F+ H ++++ ++++ L+F+GL + S + S+ Y F G L K
Sbjct: 687 PVSAYSAGSVISVFFLTSHDQIKEKTRIYVLLFVGLAIFSFLVNISQHYGFAYMGEYLTK 746
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
RIR+ K + E++WFD ++SSGAI +RL+ DA VR +VGD + LLV+ ISA I
Sbjct: 747 RIREQMLSKILTFEVNWFDIDDNSSGAICSRLAKDANVVRSMVGDRMSLLVQTISAVIIA 806
Query: 121 LVIAFQASWQ 130
+I +W+
Sbjct: 807 CIIGLVIAWR 816
>AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 |
chr1:9733597-9738129 REVERSE LENGTH=1245
Length = 1245
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 2 PIFGLLLSKMITIFYEP-PHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
P+F + ++ ++T FY P P+ +++D + A++F G G+ + + YF+ + G +L
Sbjct: 696 PLFSMGIAYVLTAFYSPFPNVIKRDVEKVAIIFAGAGIVTAPIYLLQHYFYTLMGERLTS 755
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
R+R F + EI WFD E+++G++ + L+ DA VR + D L +V+N+S +
Sbjct: 756 RVRLSLFSAILSNEIGWFDLDENNTGSLTSILAADATLVRSALADRLSTIVQNLSLTVTA 815
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
L +AF SW+ FLKGF GD Y
Sbjct: 816 LALAFFYSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAY 859
>AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein 14
| chr1:9763436-9767917 FORWARD LENGTH=1247
Length = 1247
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 3 IFGLLLSKMITIFYEP-PHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKR 61
+F + L+ ++T FY P P ++++ A++F+G G+ + + YF+ + G +L R
Sbjct: 699 LFSMGLAYVLTTFYSPFPSLIKREVDKVAIIFVGAGIVTAPIYILQHYFYTLMGERLTSR 758
Query: 62 IRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGL 121
+R F + EI WFD E+++G++ + L+ DA VR + D L +V+N+S I L
Sbjct: 759 VRLSLFSAILSNEIGWFDLDENNTGSLTSILAADATLVRSAIADRLSTIVQNLSLTITAL 818
Query: 122 VIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+AF SW+ FLKGF GD Y
Sbjct: 819 ALAFFYSWRVAAVVTACFPLLIAASLTEQLFLKGFGGDYTRAY 861
>AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette
subfamily B1 | chr2:15502162-15507050 FORWARD
LENGTH=1286
Length = 1286
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Query: 4 FGLLLSKMITIFYEPPHE-LRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIKRI 62
F +LS +++++Y P HE + K + + +GL A+L+ + F+ + G L KR+
Sbjct: 717 FAYVLSAVLSVYYNPDHEYMIKQIDKYCYLLIGLSSAALVFNTLQHSFWDIVGENLTKRV 776
Query: 63 RKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAGLV 122
R+ + E++WFD+ E+ S I ARL+ DA +VR +GD + ++V+N + +
Sbjct: 777 REKMLSAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACT 836
Query: 123 IAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
F W+ F+ GF+GD + +
Sbjct: 837 AGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAH 878
>AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 |
chr4:13177438-13183425 FORWARD LENGTH=1273
Length = 1273
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 1 MPIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
MP+F L +S+ + +Y E +K+ K A++F V +LI + FG G +L
Sbjct: 724 MPLFALGVSQALVSYYSGWDETQKEIKKIAILFCCASVITLIVYTIEHICFGTMGERLTL 783
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
R+R+ F + EI WFDE +++S + +RL +DA ++ +V D +L++N+ +
Sbjct: 784 RVRENMFRAILKNEIGWFDEVDNTSSMLASRLESDATLLKTIVVDRSTILLQNLGLVVTS 843
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+IAF +W+ + F++G+ GD Y
Sbjct: 844 FIIAFILNWRLTLVVLATYPLVISGHISEKLFMQGYGGDLNKAY 887
>AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 |
chr2:16478249-16484827 REVERSE LENGTH=1407
Length = 1407
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 2 PIFGLLLSKMITIFYEPP-HELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
P+ +++ ++T +Y LR++ W L+ +G+ +++A + ++FG+ G K+ +
Sbjct: 850 PLLAYVIALVVTTYYTSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTE 909
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
R+R+M F + E+ W+DE E+S + RL+ DA VR + L + +++ A I
Sbjct: 910 RVRRMMFSAMLRNEVGWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVA 969
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFT 157
++I W+ + A +L GF+
Sbjct: 970 ILIGLLLGWRLALVALATLPVLTLSAIAQKLWLAGFS 1006
>AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 |
chr3:20507391-20513393 REVERSE LENGTH=1408
Length = 1408
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 2 PIFGLLLSKMITIFYEPPH-ELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
P+ +++ ++T +Y+ LR++ W L+ +G+ +++A + ++FG+ G K+ +
Sbjct: 851 PLLAYVIALVVTEYYKSKGGHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTE 910
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
R+R+M F + E+ WFD+ E+S + RL+ DA VR + L + +++ A I
Sbjct: 911 RVRRMMFSAMLRNEVGWFDDEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVA 970
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFT 157
L+I W+ + A +L GF+
Sbjct: 971 LLIGLLLGWRLALVALATLPILTLSAIAQKLWLAGFS 1007
>AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 |
chr1:3538470-3543782 REVERSE LENGTH=1227
Length = 1227
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 80/164 (48%)
Query: 1 MPIFGLLLSKMITIFYEPPHELRKDSKVWALVFLGLGVASLIAVPSKFYFFGVAGGKLIK 60
MP+F L +++ + +Y + + K +++F V ++I + FG+ G +L
Sbjct: 676 MPLFALGIAQALVSYYMDWETTQNEVKRISILFCCGSVITVIVHTIEHTTFGIMGERLTL 735
Query: 61 RIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGLLVENISAAIAG 120
R+R+ F + EI WFD+ +++S + +RL +DA +R +V D +L+EN+ +
Sbjct: 736 RVRQKMFSAILRNEIGWFDKVDNTSSMLASRLESDATLLRTIVVDRSTILLENLGLVVTA 795
Query: 121 LVIAFQASWQXXXXXXXXXXXXXXNGYAHAKFLKGFTGDAKVCY 164
+I+F +W+ + F++G+ G+ Y
Sbjct: 796 FIISFILNWRLTLVVLATYPLIISGHISEKIFMQGYGGNLSKAY 839
>AT1G70610.1 | Symbols: ATTAP1, TAP1 | transporter associated with
antigen processing protein 1 | chr1:26622086-26626331
FORWARD LENGTH=700
Length = 700
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 50 FFGVAGGKLIKRIRKMCFEKAVHMEISWFDEAEHSSGAIGARLSTDAASVRGLVGDALGL 109
FFG+A L+KR+R+ + + +IS+FD + G + +RL +D V ++G+ L +
Sbjct: 199 FFGIANMILVKRMRETLYSTLLFQDISFFD--SQTVGDLTSRLGSDCQQVSRVIGNDLNM 256
Query: 110 LVENISAAIAGLVIAFQASW 129
+ N+ L+ SW
Sbjct: 257 IFRNVLQGTGALIYLLILSW 276