Miyakogusa Predicted Gene

Lj4g3v2139600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2139600.1 Non Chatacterized Hit- tr|C6THQ8|C6THQ8_SOYBN
Putative uncharacterized protein (Fragment)
OS=Glycine,58.33,2e-18,Lissencephaly type-1-like homology motif,LisH
dimerisation motif; LISH,LisH dimerisation motif;
seg,,NODE_56480_length_408_cov_67.357841.path1.1
         (114 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3SLB1_LOTJA (tr|I3SLB1) Uncharacterized protein OS=Lotus japoni...   174   1e-41
I1LVL1_SOYBN (tr|I1LVL1) Uncharacterized protein OS=Glycine max ...   145   4e-33
I1LVL0_SOYBN (tr|I1LVL0) Uncharacterized protein OS=Glycine max ...   143   2e-32
I3SZ34_MEDTR (tr|I3SZ34) Uncharacterized protein OS=Medicago tru...   113   3e-23
I1MSK2_SOYBN (tr|I1MSK2) Uncharacterized protein OS=Glycine max ...    87   2e-15
C6THQ8_SOYBN (tr|C6THQ8) Putative uncharacterized protein (Fragm...    85   7e-15
G7JTA4_MEDTR (tr|G7JTA4) Nucleolar and coiled-body phosphoprotei...    85   1e-14
I1MSK1_SOYBN (tr|I1MSK1) Uncharacterized protein OS=Glycine max ...    85   1e-14
A5C3Y6_VITVI (tr|A5C3Y6) Putative uncharacterized protein (Fragm...    74   2e-11
B9RWZ8_RICCO (tr|B9RWZ8) Cylicin-2, putative OS=Ricinus communis...    71   2e-10
M5XB01_PRUPE (tr|M5XB01) Uncharacterized protein OS=Prunus persi...    70   2e-10
F6GXJ1_VITVI (tr|F6GXJ1) Putative uncharacterized protein OS=Vit...    61   1e-07
M4F3K0_BRARP (tr|M4F3K0) Uncharacterized protein OS=Brassica rap...    55   6e-06

>I3SLB1_LOTJA (tr|I3SLB1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
          Length = 123

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/114 (78%), Positives = 90/114 (78%), Gaps = 24/114 (21%)

Query: 1   MPATPPSHKASSSTIFAFTPRQVLLRNQTMKHDADNGXXXXXXXXXXXXXHQSIARYFDR 60
           MPATPPSHKASSSTIFAFTPRQVLLRNQ                        SIARYFDR
Sbjct: 1   MPATPPSHKASSSTIFAFTPRQVLLRNQ------------------------SIARYFDR 36

Query: 61  RGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQG 114
           RGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQG
Sbjct: 37  RGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQG 90


>I1LVL1_SOYBN (tr|I1LVL1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 372

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 83/114 (72%), Gaps = 3/114 (2%)

Query: 1   MPATPPSHKASSSTIFAFTPRQVLLRNQTMKHDADNGXXXXXXXXXXXXXHQSIARYFDR 60
           MPATPPS+K   ST+FAFTPRQVLL NQTMKH  DNG             HQSIARY +R
Sbjct: 1   MPATPPSNKGRISTLFAFTPRQVLLSNQTMKHTTDNGTPISEHKVLL---HQSIARYLER 57

Query: 61  RGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQG 114
            G SK+LKKF SEA IEK++++ S VDLEE+ LKYLE C +D KSN+NDQ EQG
Sbjct: 58  SGFSKTLKKFLSEAHIEKNDLEGSPVDLEEMCLKYLEICGKDGKSNINDQNEQG 111


>I1LVL0_SOYBN (tr|I1LVL0) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 374

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 82/113 (72%), Gaps = 3/113 (2%)

Query: 1   MPATPPSHKASSSTIFAFTPRQVLLRNQTMKHDADNGXXXXXXXXXXXXXHQSIARYFDR 60
           MPATPPS+K   ST+FAFTPRQVLL NQTMKH  DNG             HQSIARY +R
Sbjct: 1   MPATPPSNKGRISTLFAFTPRQVLLSNQTMKHTTDNGTPISEHKVLL---HQSIARYLER 57

Query: 61  RGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQ 113
            G SK+LKKF SEA IEK++++ S VDLEE+ LKYLE C +D KSN+NDQ EQ
Sbjct: 58  SGFSKTLKKFLSEAHIEKNDLEGSPVDLEEMCLKYLEICGKDGKSNINDQNEQ 110


>I3SZ34_MEDTR (tr|I3SZ34) Uncharacterized protein OS=Medicago truncatula PE=2
           SV=1
          Length = 410

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 6/114 (5%)

Query: 1   MPATPPSHKASSSTIFAFTPRQVLLRNQTMKHDADNGXXXXXXXXXXXXXHQSIARYFDR 60
           MPA P   K  S T+F FTPRQVLL N+TMK+   N              +QSIA Y +R
Sbjct: 1   MPANPSGIKGIS-TLFTFTPRQVLLSNRTMKNGTLN-----PEQKQKLLLNQSIALYLER 54

Query: 61  RGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQG 114
            G SK+LKKF SEAKIE DN + S+VDLEE+  KYLET S+D KS +NDQK QG
Sbjct: 55  SGFSKTLKKFLSEAKIENDNTEGSTVDLEEMCRKYLETGSKDAKSTINDQKAQG 108


>I1MSK2_SOYBN (tr|I1MSK2) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 345

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 49/64 (76%)

Query: 51  HQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQ 110
           HQSIARY    G SK+LKKFRSEA+ EK+++  S VDLEE+ LKY E C +D KSN+NDQ
Sbjct: 18  HQSIARYLKHSGFSKTLKKFRSEAQFEKNDLKGSPVDLEEMCLKYFEICGKDAKSNLNDQ 77

Query: 111 KEQG 114
            EQG
Sbjct: 78  NEQG 81


>C6THQ8_SOYBN (tr|C6THQ8) Putative uncharacterized protein (Fragment) OS=Glycine
           max PE=2 SV=1
          Length = 101

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 48/63 (76%)

Query: 51  HQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQ 110
           HQSIARY    G SK+LKKFRSEA+ EK+++  S VDLEE+ LKY E C +D KSN+NDQ
Sbjct: 18  HQSIARYLKHSGFSKTLKKFRSEAQFEKNDLKGSPVDLEEMCLKYFEICGKDAKSNLNDQ 77

Query: 111 KEQ 113
            EQ
Sbjct: 78  NEQ 80


>G7JTA4_MEDTR (tr|G7JTA4) Nucleolar and coiled-body phosphoprotein OS=Medicago
           truncatula GN=MTR_4g127160 PE=4 SV=1
          Length = 382

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 50/64 (78%)

Query: 51  HQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQ 110
           +QSIA Y +R G SK+LKKF SEAKIE DN + S+VDLEE+  KYLET S+D KS +NDQ
Sbjct: 17  NQSIALYLERSGFSKTLKKFLSEAKIENDNTEGSTVDLEEMCRKYLETGSKDAKSTINDQ 76

Query: 111 KEQG 114
           K QG
Sbjct: 77  KAQG 80


>I1MSK1_SOYBN (tr|I1MSK1) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 347

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 48/63 (76%)

Query: 51  HQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQ 110
           HQSIARY    G SK+LKKFRSEA+ EK+++  S VDLEE+ LKY E C +D KSN+NDQ
Sbjct: 18  HQSIARYLKHSGFSKTLKKFRSEAQFEKNDLKGSPVDLEEMCLKYFEICGKDAKSNLNDQ 77

Query: 111 KEQ 113
            EQ
Sbjct: 78  NEQ 80


>A5C3Y6_VITVI (tr|A5C3Y6) Putative uncharacterized protein (Fragment) OS=Vitis
           vinifera GN=VITISV_015753 PE=4 SV=1
          Length = 902

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 14  TIFAFTPRQVLLRNQTMKHDADNGXXXXXXXXXXXXXHQSIARYFDRRGLSKSLKKFRSE 73
           ++ AF PR V+L NQ M + ++               H SI  Y  R G SK+LK F+ E
Sbjct: 438 SLTAFKPRSVMLSNQAMNNLSNKTSKTLNPCQKKTLLHSSILHYLQRSGFSKTLKYFQRE 497

Query: 74  AKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQ 113
           A +E DN +  S+DLEE++ K LETC  +  +N N+ KEQ
Sbjct: 498 APLENDNGNGCSLDLEEVYYKSLETCD-NASTNWNNCKEQ 536


>B9RWZ8_RICCO (tr|B9RWZ8) Cylicin-2, putative OS=Ricinus communis GN=RCOM_1708080
           PE=4 SV=1
          Length = 458

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 6/90 (6%)

Query: 14  TIFAFTPRQVLLRNQ----TMKHD--ADNGXXXXXXXXXXXXXHQSIARYFDRRGLSKSL 67
           +I AF PRQVLL ++    +MK D  ++N                SIA+Y +R G SK++
Sbjct: 15  SILAFKPRQVLLLSKPPASSMKLDDGSNNNDKLILKPEQKTLLLNSIAQYLERSGFSKTV 74

Query: 68  KKFRSEAKIEKDNVDESSVDLEELFLKYLE 97
           KKFRSEA+I+KD++ ESS DL+E+F+K L+
Sbjct: 75  KKFRSEARIQKDDLIESSFDLQEMFIKILD 104


>M5XB01_PRUPE (tr|M5XB01) Uncharacterized protein OS=Prunus persica
           GN=PRUPE_ppa007564mg PE=4 SV=1
          Length = 363

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 7/104 (6%)

Query: 14  TIFAFTPRQVLLRN-QTMKHDADNGXXXXXXXXXXXXXH---QSIARYFDRRGLSKSLKK 69
           T+ AF PRQV L N + MKH   N                   ++AR+ +  G SK+LKK
Sbjct: 15  TLLAFRPRQVQLANLEDMKHSKPNISSDSTQTLSPGQKGPLLHAVARFLESNGFSKTLKK 74

Query: 70  FRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQKEQ 113
           FRSEA+IEK    ESS+DLEE++ K +  C+  V +NVN QK++
Sbjct: 75  FRSEAQIEKSGPKESSLDLEEMYCKLM--CNNGV-TNVNSQKKK 115


>F6GXJ1_VITVI (tr|F6GXJ1) Putative uncharacterized protein OS=Vitis vinifera
           GN=VIT_11s0052g00300 PE=4 SV=1
          Length = 453

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 51  HQSIARYFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETCSQDVKSNVNDQ 110
           H SI  Y  R G SK+LK F+ EA +E DN +  S+DLEE++ K LETC  D  +N N+ 
Sbjct: 22  HSSILHYLQRSGFSKTLKYFQREAPLENDNGNGCSLDLEEVYYKSLETCD-DASTNWNNC 80

Query: 111 KEQ 113
           KEQ
Sbjct: 81  KEQ 83


>M4F3K0_BRARP (tr|M4F3K0) Uncharacterized protein OS=Brassica rapa subsp.
           pekinensis GN=Bra035650 PE=4 SV=1
          Length = 377

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 1   MP---ATPPSHKAS-SSTIFAFTPRQVLLRNQTMKHDADNGXXXXXXXXXXXXXHQSIAR 56
           MP   AT PS + + +  + A TPRQVLL ++ +   A                 +SIA+
Sbjct: 1   MPKTLATEPSSRITLNPALLALTPRQVLLISRPVM--AKESKALSLKSEQKALLLRSIAQ 58

Query: 57  YFDRRGLSKSLKKFRSEAKIEKDNVDESSVDLEELFLKYLETC---SQDVKSNVNDQKEQ 113
           Y +R G SK  KK  SEA+IEK  +D +  DLEE++  +L      + +VK    DQK++
Sbjct: 59  YLERCGFSKCFKKLLSEAEIEKKELDSALPDLEEVYGVFLNKSNLEAVEVKDESGDQKKE 118