Miyakogusa Predicted Gene
- Lj4g3v2122820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2122820.1 Non Characterized Hit- tr|I1MH11|I1MH11_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,67.41,0,PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; PUMILIO 1,
2,NULL; RNA BINDING PR,CUFF.50294.1
(853 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC ... 1087 0.0
Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC ... 1087 0.0
Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC ... 1087 0.0
Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC ... 399 e-111
Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC | chr4:241... 395 e-110
Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC | chr4:241... 394 e-109
Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC | chr2:417... 391 e-108
Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC | chr2:417... 391 e-108
Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC ... 385 e-107
Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC ... 326 7e-89
Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC | chr2:417... 317 5e-86
Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC ... 165 2e-40
Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC ... 162 1e-39
Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC ... 152 1e-36
Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC ... 109 1e-23
Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC ... 106 1e-22
Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC ... 103 5e-22
Medtr1g100230.1 | pumilio-like protein | LC | chr1:45172367-4517... 92 3e-18
Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC ... 85 3e-16
Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484... 63 1e-09
Medtr4g120470.1 | pumilio-like protein | HC | chr4:49940997-4993... 59 2e-08
>Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/924 (61%), Positives = 654/924 (70%), Gaps = 73/924 (7%)
Query: 1 MATESPIRISEAGGKWPTLKEAATFGSPSRNVATEDLAVLLKSHRFCGNGRDAVPNRSGS 60
MATESPIRISEAGGKWP+ EA+ +G+P RN+ EDL VLLK HRF G+G+DA P+RSGS
Sbjct: 1 MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60
Query: 61 APP---------------------SMEGSFMASNNLLSQNKAQ-----------NVDL-- 86
APP S+ G A N S+ + + NV+L
Sbjct: 61 APPSMEGSFLAIENLLPLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLNP 120
Query: 87 -----LTL---------------NRAMKKYD-TGKDSFHLSQGTLATPKEESEDDSPQQ- 124
LT N + D K S HL Q TL+T KEESEDDSPQQ
Sbjct: 121 RLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQQ 180
Query: 125 PYDDELDKASGIWHRQDAASVTSQHKN------EDLPHTMSPVYNKSLGVV----DEVID 174
+++EL SG+W RQDAAS+ Q KN ED P TMSPVYN SL D+ I+
Sbjct: 181 AHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPIE 240
Query: 175 LDAGSSSSQDPAVITLDSAKPTVGADDIRLSTNVDXXXXXXXXXXXXXXXXXXXXDLDVT 234
L+AGS SS D ++SAK T GADDIR+S++VD +LD
Sbjct: 241 LEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDAA 300
Query: 235 VIESQLRALSVSNLPNSERQSCEDKWNNSCQNKLIQHQ---QQNNPREVPSTNSQSEKYT 291
+ SQL LSVSNLPNSE S E+K S QN ++Q Q QQ+ P EVPS NSQS
Sbjct: 301 TVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNPA 360
Query: 292 FGGTVQFIHNPSKFSSDVHPVLQSSGLTPPLHAPAAAYMTSTNPFYGNLQASGVYSPQYV 351
+ G QF HN SK DV P+LQSSG TPPL+A AAAYM S NPFY N+QASG Y+PQYV
Sbjct: 361 YVGREQFPHNSSKLP-DVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYV 419
Query: 352 GGXXXXXXXXXXXXXXXXXHGTVPFLVDGAIGSSFTLQAPGISTGGNISHGAEMLPASKL 411
GG HG VPF+VDGA SS+ PG+STGGNISHGAEM+ A+K
Sbjct: 420 GGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKY 479
Query: 412 LGQYGFPLQPSFGDSMYMQYHQQPFAEGYGVSGHL--LTPRPSVGSQSDPFDSQKWPNSG 469
LGQ+GFP+QPSFGD +YMQY+QQPF EGYG+SGH PR SV Q +P+DSQK P +G
Sbjct: 480 LGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASV-VQINPYDSQKRPGTG 538
Query: 470 AYLDDKKVHYQGNGAHLNSSRGGLMIPSYFGHPPNMRFVMQNXXXXXXXXXXXAYQESNP 529
AYLDDKK+H Q GA +NS RGGL +P+YFGH PN FVMQ Y + +P
Sbjct: 539 AYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSP 598
Query: 530 GLPGGRNEMKVSPVSGRHGGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDII 589
GL GGRNE+K SP SGR+GG+++GW G R+FDS DPKIVNFLE+LKSGKGRRFELSDII
Sbjct: 599 GLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDII 658
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS 649
G+IVEFS+D HGSRFIQQK E+CG E+KALVFKEVLPHASKLMTDVFGNYVIQKFFEYG+
Sbjct: 659 GHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGN 718
Query: 650 PKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNG 709
P+QRKELA +L GQILPLSLQMYGCRVIQKALEVI+ EQK QLV ELDGN+MRCVRDQNG
Sbjct: 719 PEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNG 778
Query: 710 NHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEI 769
NHVIQKCIESIPT KIGFI+SAFRGQV LSMHPYGCRVIQR+LEHC+DEVQCQFIVDEI
Sbjct: 779 NHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEI 838
Query: 770 LESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYG 829
LES CSLAQDQYGNYVTQHVLERG+PQERSQII +LSGH+V+LSQHKFASNVVEKCLEYG
Sbjct: 839 LESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYG 898
Query: 830 DTTERQLLIAEIVGHDEQSDNLLV 853
D +ER++LI EI+ HDEQ+DNLL
Sbjct: 899 DASEREVLIVEIIAHDEQNDNLLT 922
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 132/252 (52%), Gaps = 9/252 (3%)
Query: 581 RRFELSD-IIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNY 639
+R EL++ + G I+ S +G R IQ+ E E KA + +E+ + + + D GN+
Sbjct: 721 QRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNGNH 780
Query: 640 VIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQ-LVHELDG 698
VIQK E + + + GQ+ LS+ YGCRVIQ+ LE E + Q +V E+
Sbjct: 781 VIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILE 840
Query: 699 NVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSD 758
+V +DQ GN+V Q +E ++ IIS G V LS H + V+++ LE+ D
Sbjct: 841 SVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEY-GD 899
Query: 759 EVQCQFIVDEIL------ESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVEL 812
+ + ++ EI+ ++ ++ +DQ+ NYV Q V++ +R++++ + H L
Sbjct: 900 ASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANAL 959
Query: 813 SQHKFASNVVEK 824
++ + ++V +
Sbjct: 960 KKYTYGKHIVAR 971
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 583 FELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKA-LVFKEVLPHASKLMTDVFGNYVI 641
F LS G + S P+G R IQ+ E C E + + E+L L D +GNYV
Sbjct: 796 FILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILESVCSLAQDQYGNYVT 855
Query: 642 QKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHEL----- 696
Q E G P++R ++ ++L G ++ LS + V++K LE D ++ L+ E+
Sbjct: 856 QHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDASEREVLIVEIIAHDE 915
Query: 697 -DGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEH 755
+ N++ ++DQ N+VIQK I+ + ++S R L + YG ++ R +EH
Sbjct: 916 QNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANALKKYTYGKHIVAR-MEH 974
Query: 756 CSDEVQC 762
E Q
Sbjct: 975 QFGENQA 981
>Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/924 (61%), Positives = 654/924 (70%), Gaps = 73/924 (7%)
Query: 1 MATESPIRISEAGGKWPTLKEAATFGSPSRNVATEDLAVLLKSHRFCGNGRDAVPNRSGS 60
MATESPIRISEAGGKWP+ EA+ +G+P RN+ EDL VLLK HRF G+G+DA P+RSGS
Sbjct: 1 MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60
Query: 61 APP---------------------SMEGSFMASNNLLSQNKAQ-----------NVDL-- 86
APP S+ G A N S+ + + NV+L
Sbjct: 61 APPSMEGSFLAIENLLPLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLNP 120
Query: 87 -----LTL---------------NRAMKKYD-TGKDSFHLSQGTLATPKEESEDDSPQQ- 124
LT N + D K S HL Q TL+T KEESEDDSPQQ
Sbjct: 121 RLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQQ 180
Query: 125 PYDDELDKASGIWHRQDAASVTSQHKN------EDLPHTMSPVYNKSLGVV----DEVID 174
+++EL SG+W RQDAAS+ Q KN ED P TMSPVYN SL D+ I+
Sbjct: 181 AHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPIE 240
Query: 175 LDAGSSSSQDPAVITLDSAKPTVGADDIRLSTNVDXXXXXXXXXXXXXXXXXXXXDLDVT 234
L+AGS SS D ++SAK T GADDIR+S++VD +LD
Sbjct: 241 LEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDAA 300
Query: 235 VIESQLRALSVSNLPNSERQSCEDKWNNSCQNKLIQHQ---QQNNPREVPSTNSQSEKYT 291
+ SQL LSVSNLPNSE S E+K S QN ++Q Q QQ+ P EVPS NSQS
Sbjct: 301 TVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNPA 360
Query: 292 FGGTVQFIHNPSKFSSDVHPVLQSSGLTPPLHAPAAAYMTSTNPFYGNLQASGVYSPQYV 351
+ G QF HN SK DV P+LQSSG TPPL+A AAAYM S NPFY N+QASG Y+PQYV
Sbjct: 361 YVGREQFPHNSSKLP-DVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYV 419
Query: 352 GGXXXXXXXXXXXXXXXXXHGTVPFLVDGAIGSSFTLQAPGISTGGNISHGAEMLPASKL 411
GG HG VPF+VDGA SS+ PG+STGGNISHGAEM+ A+K
Sbjct: 420 GGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKY 479
Query: 412 LGQYGFPLQPSFGDSMYMQYHQQPFAEGYGVSGHL--LTPRPSVGSQSDPFDSQKWPNSG 469
LGQ+GFP+QPSFGD +YMQY+QQPF EGYG+SGH PR SV Q +P+DSQK P +G
Sbjct: 480 LGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASV-VQINPYDSQKRPGTG 538
Query: 470 AYLDDKKVHYQGNGAHLNSSRGGLMIPSYFGHPPNMRFVMQNXXXXXXXXXXXAYQESNP 529
AYLDDKK+H Q GA +NS RGGL +P+YFGH PN FVMQ Y + +P
Sbjct: 539 AYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSP 598
Query: 530 GLPGGRNEMKVSPVSGRHGGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDII 589
GL GGRNE+K SP SGR+GG+++GW G R+FDS DPKIVNFLE+LKSGKGRRFELSDII
Sbjct: 599 GLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDII 658
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS 649
G+IVEFS+D HGSRFIQQK E+CG E+KALVFKEVLPHASKLMTDVFGNYVIQKFFEYG+
Sbjct: 659 GHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGN 718
Query: 650 PKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNG 709
P+QRKELA +L GQILPLSLQMYGCRVIQKALEVI+ EQK QLV ELDGN+MRCVRDQNG
Sbjct: 719 PEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNG 778
Query: 710 NHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEI 769
NHVIQKCIESIPT KIGFI+SAFRGQV LSMHPYGCRVIQR+LEHC+DEVQCQFIVDEI
Sbjct: 779 NHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEI 838
Query: 770 LESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYG 829
LES CSLAQDQYGNYVTQHVLERG+PQERSQII +LSGH+V+LSQHKFASNVVEKCLEYG
Sbjct: 839 LESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYG 898
Query: 830 DTTERQLLIAEIVGHDEQSDNLLV 853
D +ER++LI EI+ HDEQ+DNLL
Sbjct: 899 DASEREVLIVEIIAHDEQNDNLLT 922
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 132/252 (52%), Gaps = 9/252 (3%)
Query: 581 RRFELSD-IIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNY 639
+R EL++ + G I+ S +G R IQ+ E E KA + +E+ + + + D GN+
Sbjct: 721 QRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNGNH 780
Query: 640 VIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQ-LVHELDG 698
VIQK E + + + GQ+ LS+ YGCRVIQ+ LE E + Q +V E+
Sbjct: 781 VIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILE 840
Query: 699 NVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSD 758
+V +DQ GN+V Q +E ++ IIS G V LS H + V+++ LE+ D
Sbjct: 841 SVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEY-GD 899
Query: 759 EVQCQFIVDEIL------ESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVEL 812
+ + ++ EI+ ++ ++ +DQ+ NYV Q V++ +R++++ + H L
Sbjct: 900 ASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANAL 959
Query: 813 SQHKFASNVVEK 824
++ + ++V +
Sbjct: 960 KKYTYGKHIVAR 971
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 583 FELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKA-LVFKEVLPHASKLMTDVFGNYVI 641
F LS G + S P+G R IQ+ E C E + + E+L L D +GNYV
Sbjct: 796 FILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILESVCSLAQDQYGNYVT 855
Query: 642 QKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHEL----- 696
Q E G P++R ++ ++L G ++ LS + V++K LE D ++ L+ E+
Sbjct: 856 QHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDASEREVLIVEIIAHDE 915
Query: 697 -DGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEH 755
+ N++ ++DQ N+VIQK I+ + ++S R L + YG ++ R +EH
Sbjct: 916 QNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANALKKYTYGKHIVAR-MEH 974
Query: 756 CSDEVQC 762
E Q
Sbjct: 975 QFGENQA 981
>Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-16000131 | 20130731
Length = 926
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/923 (61%), Positives = 654/923 (70%), Gaps = 73/923 (7%)
Query: 1 MATESPIRISEAGGKWPTLKEAATFGSPSRNVATEDLAVLLKSHRFCGNGRDAVPNRSGS 60
MATESPIRISEAGGKWP+ EA+ +G+P RN+ EDL VLLK HRF G+G+DA P+RSGS
Sbjct: 1 MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60
Query: 61 APP---------------------SMEGSFMASNNLLSQNKAQ-----------NVDL-- 86
APP S+ G A N S+ + + NV+L
Sbjct: 61 APPSMEGSFLAIENLLPLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLNP 120
Query: 87 -----LTL---------------NRAMKKYD-TGKDSFHLSQGTLATPKEESEDDSPQQ- 124
LT N + D K S HL Q TL+T KEESEDDSPQQ
Sbjct: 121 RLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQQ 180
Query: 125 PYDDELDKASGIWHRQDAASVTSQHKN------EDLPHTMSPVYNKSLGVV----DEVID 174
+++EL SG+W RQDAAS+ Q KN ED P TMSPVYN SL D+ I+
Sbjct: 181 AHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPIE 240
Query: 175 LDAGSSSSQDPAVITLDSAKPTVGADDIRLSTNVDXXXXXXXXXXXXXXXXXXXXDLDVT 234
L+AGS SS D ++SAK T GADDIR+S++VD +LD
Sbjct: 241 LEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDAA 300
Query: 235 VIESQLRALSVSNLPNSERQSCEDKWNNSCQNKLIQHQ---QQNNPREVPSTNSQSEKYT 291
+ SQL LSVSNLPNSE S E+K S QN ++Q Q QQ+ P EVPS NSQS
Sbjct: 301 TVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNPA 360
Query: 292 FGGTVQFIHNPSKFSSDVHPVLQSSGLTPPLHAPAAAYMTSTNPFYGNLQASGVYSPQYV 351
+ G QF HN SK DV P+LQSSG TPPL+A AAAYM S NPFY N+QASG Y+PQYV
Sbjct: 361 YVGREQFPHNSSKLP-DVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYV 419
Query: 352 GGXXXXXXXXXXXXXXXXXHGTVPFLVDGAIGSSFTLQAPGISTGGNISHGAEMLPASKL 411
GG HG VPF+VDGA SS+ PG+STGGNISHGAEM+ A+K
Sbjct: 420 GGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKY 479
Query: 412 LGQYGFPLQPSFGDSMYMQYHQQPFAEGYGVSGHL--LTPRPSVGSQSDPFDSQKWPNSG 469
LGQ+GFP+QPSFGD +YMQY+QQPF EGYG+SGH PR SV Q +P+DSQK P +G
Sbjct: 480 LGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASV-VQINPYDSQKRPGTG 538
Query: 470 AYLDDKKVHYQGNGAHLNSSRGGLMIPSYFGHPPNMRFVMQNXXXXXXXXXXXAYQESNP 529
AYLDDKK+H Q GA +NS RGGL +P+YFGH PN FVMQ Y + +P
Sbjct: 539 AYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSP 598
Query: 530 GLPGGRNEMKVSPVSGRHGGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDII 589
GL GGRNE+K SP SGR+GG+++GW G R+FDS DPKIVNFLE+LKSGKGRRFELSDII
Sbjct: 599 GLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDII 658
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS 649
G+IVEFS+D HGSRFIQQK E+CG E+KALVFKEVLPHASKLMTDVFGNYVIQKFFEYG+
Sbjct: 659 GHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGN 718
Query: 650 PKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNG 709
P+QRKELA +L GQILPLSLQMYGCRVIQKALEVI+ EQK QLV ELDGN+MRCVRDQNG
Sbjct: 719 PEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNG 778
Query: 710 NHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEI 769
NHVIQKCIESIPT KIGFI+SAFRGQV LSMHPYGCRVIQR+LEHC+DEVQCQFIVDEI
Sbjct: 779 NHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEI 838
Query: 770 LESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYG 829
LES CSLAQDQYGNYVTQHVLERG+PQERSQII +LSGH+V+LSQHKFASNVVEKCLEYG
Sbjct: 839 LESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYG 898
Query: 830 DTTERQLLIAEIVGHDEQSDNLL 852
D +ER++LI EI+ HDEQ+DNLL
Sbjct: 899 DASEREVLIVEIIAHDEQNDNLL 921
>Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524277-42532024 | 20130731
Length = 973
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 228/281 (81%)
Query: 571 FLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASK 630
L++ K+ K + FELSDII ++V+FS D +GSRFIQQK ET VE+K +F E+LPHA
Sbjct: 626 LLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARA 685
Query: 631 LMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKV 690
LMTDVFGNYVIQKFFE+G+ QRKELAN+L G +LPLSLQMYGCRVIQKALEV+D++Q+
Sbjct: 686 LMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQS 745
Query: 691 QLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQ 750
Q+V EL G +M+CVRDQNGNHVIQKCIES+P +I FII++F GQV LS HPYGCRVIQ
Sbjct: 746 QMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQ 805
Query: 751 RVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIV 810
RVLEHC D + I++EI++S C+LAQDQYGNYV QH+LE GKP ER+ +I +L+G IV
Sbjct: 806 RVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIV 865
Query: 811 ELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSDNL 851
++SQ KFASNV+EKCL +G ERQ+L+ E++G ++++ L
Sbjct: 866 KMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPL 906
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 45/192 (23%)
Query: 582 RFELSDIIGYIVEFSADPHGSRFIQQKFETCG-VEDKALVFKEVLPHASKLMTDVFGNYV 640
+F ++ G +V S P+G R IQ+ E C ++ + ++ +E++ L D +GNYV
Sbjct: 781 QFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYV 840
Query: 641 IQKFFE------------------------------------YGSPKQRKELANRLVG-- 662
IQ E +GSP++R+ L N ++G
Sbjct: 841 IQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTS 900
Query: 663 -QILPLSLQM---YGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIE 718
+ PL M +G V+QK LE D + ++ + ++ R G H++ + +
Sbjct: 901 DENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEK 960
Query: 719 SIPT--EKIGFI 728
I T +IG +
Sbjct: 961 LITTGERRIGLL 972
>Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 1025
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 180/282 (63%), Positives = 225/282 (79%)
Query: 570 NFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHAS 629
+ LE+ KS K + FELS+I G++VEFSAD +GSRFIQQK ET E+K +V++E++PHA
Sbjct: 673 SLLEEFKSNKAKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHAL 732
Query: 630 KLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQK 689
LMTDVFGNYV+QKFFE+G QR+ELAN+L+G +L LSLQMYGCRVIQKA+EV+D++QK
Sbjct: 733 ALMTDVFGNYVVQKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQK 792
Query: 690 VQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+++V ELDGN+MRCVRDQNGNHVIQKCIE +P E I FI+S F QV LS HPYGCRVI
Sbjct: 793 IEMVKELDGNIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVI 852
Query: 750 QRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHI 809
QRVLEHC Q ++DEIL + LAQDQYGNYV QHVLE GKP ERS II L+G I
Sbjct: 853 QRVLEHCESPATQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKI 912
Query: 810 VELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSDNL 851
V++SQ KFASNVVEKCL + ERQ+L++E++G ++++ L
Sbjct: 913 VQMSQQKFASNVVEKCLTFSGPAERQILVSEMLGTTDENEPL 954
>Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 954
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 180/282 (63%), Positives = 225/282 (79%)
Query: 570 NFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHAS 629
+ LE+ KS K + FELS+I G++VEFSAD +GSRFIQQK ET E+K +V++E++PHA
Sbjct: 602 SLLEEFKSNKAKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHAL 661
Query: 630 KLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQK 689
LMTDVFGNYV+QKFFE+G QR+ELAN+L+G +L LSLQMYGCRVIQKA+EV+D++QK
Sbjct: 662 ALMTDVFGNYVVQKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQK 721
Query: 690 VQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+++V ELDGN+MRCVRDQNGNHVIQKCIE +P E I FI+S F QV LS HPYGCRVI
Sbjct: 722 IEMVKELDGNIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVI 781
Query: 750 QRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHI 809
QRVLEHC Q ++DEIL + LAQDQYGNYV QHVLE GKP ERS II L+G I
Sbjct: 782 QRVLEHCESPATQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKI 841
Query: 810 VELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSDNL 851
V++SQ KFASNVVEKCL + ERQ+L++E++G ++++ L
Sbjct: 842 VQMSQQKFASNVVEKCLTFSGPAERQILVSEMLGTTDENEPL 883
>Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/282 (64%), Positives = 225/282 (79%)
Query: 570 NFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHAS 629
+ LE+ KS K + FELS+I G++VEFSAD +GSRFIQQK ET E+K +V++E+ PHA
Sbjct: 695 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHAL 754
Query: 630 KLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQK 689
LMTDVFGNYV+QKFFE+G QR+ELAN+L G +L LSLQMYGCRVIQKA+EV+D++QK
Sbjct: 755 ALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQK 814
Query: 690 VQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+++V ELDGN+MRCVRDQNGNHVIQKCIE +P + I FIIS F QV LS HPYGCRVI
Sbjct: 815 IKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVI 874
Query: 750 QRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHI 809
QRVLEHC + Q ++DEIL + LAQDQYGNYV QHVLE GKP ERS II L+G+I
Sbjct: 875 QRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNI 934
Query: 810 VELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSDNL 851
V++SQ KFASNVVEKCL +G +ER LL+ E++G ++++ L
Sbjct: 935 VQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPL 976
>Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/282 (64%), Positives = 225/282 (79%)
Query: 570 NFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHAS 629
+ LE+ KS K + FELS+I G++VEFSAD +GSRFIQQK ET E+K +V++E+ PHA
Sbjct: 695 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHAL 754
Query: 630 KLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQK 689
LMTDVFGNYV+QKFFE+G QR+ELAN+L G +L LSLQMYGCRVIQKA+EV+D++QK
Sbjct: 755 ALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQK 814
Query: 690 VQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+++V ELDGN+MRCVRDQNGNHVIQKCIE +P + I FIIS F QV LS HPYGCRVI
Sbjct: 815 IKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVI 874
Query: 750 QRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHI 809
QRVLEHC + Q ++DEIL + LAQDQYGNYV QHVLE GKP ERS II L+G+I
Sbjct: 875 QRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNI 934
Query: 810 VELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSDNL 851
V++SQ KFASNVVEKCL +G +ER LL+ E++G ++++ L
Sbjct: 935 VQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPL 976
>Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC |
chr5:34410395-34418672 | 20130731
Length = 1012
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 240/327 (73%), Gaps = 2/327 (0%)
Query: 529 PGLPGGRNEMKVSPVSGRH--GGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELS 586
PG P ++E + +G G+ +G S + + L++ KS K + FELS
Sbjct: 612 PGSPMSQSERNMRLAAGMRNVAGVFTGAWHSDAVSSLDENFPSSLLDEFKSNKTKCFELS 671
Query: 587 DIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFE 646
+I G++VEFSAD +GSRFIQQK ET +E+K +VF E++P A LMTDVFGNYV+QKFFE
Sbjct: 672 EIAGHVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFE 731
Query: 647 YGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRD 706
+G+ +Q +ELA++L G +L LSLQMYGCRVIQKA+EV++++QK ++V ELDG++MRCVRD
Sbjct: 732 HGTAEQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVNLDQKTKMVTELDGHIMRCVRD 791
Query: 707 QNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIV 766
QNGNHVIQKCIE +P ++I FI+S F QV LS HPYGCRVIQRVLE+C D Q ++
Sbjct: 792 QNGNHVIQKCIECVPEDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMM 851
Query: 767 DEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCL 826
DEIL+ LAQDQYGNYV QHVLE GKP ER+ II +G IV++SQ KFASNV+EKCL
Sbjct: 852 DEILQCVSMLAQDQYGNYVVQHVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCL 911
Query: 827 EYGDTTERQLLIAEIVGHDEQSDNLLV 853
+G TERQ+L+ E++G + ++ L V
Sbjct: 912 SFGTPTERQVLVNEMIGSTDDNEPLQV 938
>Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42529214 | 20130731
Length = 846
Score = 326 bits (835), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 178/217 (82%)
Query: 571 FLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASK 630
L++ K+ K + FELSDII ++V+FS D +GSRFIQQK ET VE+K +F E+LPHA
Sbjct: 626 LLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARA 685
Query: 631 LMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKV 690
LMTDVFGNYVIQKFFE+G+ QRKELAN+L G +LPLSLQMYGCRVIQKALEV+D++Q+
Sbjct: 686 LMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQS 745
Query: 691 QLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQ 750
Q+V EL G +M+CVRDQNGNHVIQKCIES+P +I FII++F GQV LS HPYGCRVIQ
Sbjct: 746 QMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQ 805
Query: 751 RVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQ 787
RVLEHC D + I++EI++S C+LAQDQYGNYV Q
Sbjct: 806 RVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYVIQ 842
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 646 EYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVR 705
E+ + K + + ++ ++ S YG R IQ+ LE +E+K ++ E+ + +
Sbjct: 629 EFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMT 688
Query: 706 DQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFI 765
D GN+VIQK E + + + G V LS+ YGCRVIQ+ LE + Q Q +
Sbjct: 689 DVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQ-M 747
Query: 766 VDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQ-IIGRLSGHIVELSQHKFASNVVEK 824
V E+ + +DQ GN+V Q +E PQ R Q II G +V LS H + V+++
Sbjct: 748 VSELSGAIMKCVRDQNGNHVIQKCIE-SVPQNRIQFIITSFYGQVVALSTHPYGCRVIQR 806
Query: 825 CLEYGDTTERQLLIAEIV 842
LE+ D + Q +I E +
Sbjct: 807 VLEHCDDLKTQEIIMEEI 824
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 727 FIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVT 786
F +S V S YG R IQ+ LE S E + + I EIL + +L D +GNYV
Sbjct: 638 FELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTK-IFPEILPHARALMTDVFGNYVI 696
Query: 787 QHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVG 843
Q E G +R ++ +L+GH++ LS + V++K LE D ++ +++E+ G
Sbjct: 697 QKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSG 753
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 700 VMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDE 759
V++ DQ G+ IQ+ +E+ E+ I L +G VIQ+ EH +D
Sbjct: 647 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDS 706
Query: 760 VQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFAS 819
Q + + +++ L+ YG V Q LE ++SQ++ LSG I++ + + +
Sbjct: 707 -QRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGN 765
Query: 820 NVVEKCLEYGDTTERQLLIAEIVG 843
+V++KC+E Q +I G
Sbjct: 766 HVIQKCIESVPQNRIQFIITSFYG 789
>Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 917
Score = 317 bits (811), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 175/218 (80%)
Query: 570 NFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHAS 629
+ LE+ KS K + FELS+I G++VEFSAD +GSRFIQQK ET E+K +V++E+ PHA
Sbjct: 695 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHAL 754
Query: 630 KLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQK 689
LMTDVFGNYV+QKFFE+G QR+ELAN+L G +L LSLQMYGCRVIQKA+EV+D++QK
Sbjct: 755 ALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQK 814
Query: 690 VQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+++V ELDGN+MRCVRDQNGNHVIQKCIE +P + I FIIS F QV LS HPYGCRVI
Sbjct: 815 IKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVI 874
Query: 750 QRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQ 787
QRVLEHC + Q ++DEIL + LAQDQYGNYV Q
Sbjct: 875 QRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQ 912
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
Query: 638 NYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELD 697
N+ E+ S K + + + G ++ S YG R IQ+ LE E+K + E+
Sbjct: 691 NFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIT 750
Query: 698 GNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCS 757
+ + + D GN+V+QK E + + + G V LS+ YGCRVIQ+ +E
Sbjct: 751 PHALALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIE-VV 809
Query: 758 DEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKF 817
D Q +V E+ + +DQ GN+V Q +E II +V LS H +
Sbjct: 810 DLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPY 869
Query: 818 ASNVVEKCLEYGDTTE-RQLLIAEIVG 843
V+++ LE+ + + +Q ++ EI+G
Sbjct: 870 GCRVIQRVLEHCENPDTQQKVMDEILG 896
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 727 FIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVT 786
F +S G V S YG R IQ+ LE + E + + EI + +L D +GNYV
Sbjct: 708 FELSEISGHVVEFSADQYGSRFIQQKLETATTE-EKNMVYQEITPHALALMTDVFGNYVV 766
Query: 787 QHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGH 844
Q E G +R ++ +L GH++ LS + V++K +E D ++ ++ E+ G+
Sbjct: 767 QKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGN 824
>Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42528433 | 20130731
Length = 787
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 89/110 (80%)
Query: 571 FLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASK 630
L++ K+ K + FELSDII ++V+FS D +GSRFIQQK ET VE+K +F E+LPHA
Sbjct: 657 LLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARA 716
Query: 631 LMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKA 680
LMTDVFGNYVIQKFFE+G+ QRKELAN+L G +LPLSLQMYGCRVIQK
Sbjct: 717 LMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 646 EYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVR 705
E+ + K + + ++ ++ S YG R IQ+ LE +E+K ++ E+ + +
Sbjct: 660 EFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMT 719
Query: 706 DQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRV 752
D GN+VIQK E + + + G V LS+ YGCRVIQ+V
Sbjct: 720 DVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 727 FIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVT 786
F +S V S YG R IQ+ LE S E + + I EIL + +L D +GNYV
Sbjct: 669 FELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTK-IFPEILPHARALMTDVFGNYVI 727
Query: 787 QHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKC 825
Q E G +R ++ +L+GH++ LS + V++K
Sbjct: 728 QKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
>Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:1611979-1606856 | 20130731
Length = 745
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 154/272 (56%), Gaps = 6/272 (2%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
L + G I + D +G RF+Q+ F+ +ED ++F E++ H +LM FGNY+I+K
Sbjct: 424 LMEARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKL 483
Query: 645 FEYGSPKQRKELANRLV---GQILPLSLQMYGCRVIQKALEVIDIEQKVQLV-HELDGNV 700
+ S +QR ++ ++ GQ++ +SL +G RV+QK +E + +Q+V LV L+
Sbjct: 484 LDVCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSALEPGF 543
Query: 701 MRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEV 760
+ ++D NGNHV+Q C+E + FI A ++ H +GC V+ + + + S E
Sbjct: 544 LILIKDNNGNHVVQHCLEYLRNGDNKFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEH 603
Query: 761 QCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASN 820
+ Q +V EI ++ LAQD+YGNYV Q+VL+ P + + + G+ V +S KF+S
Sbjct: 604 R-QRLVAEISANALLLAQDKYGNYVVQYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSR 662
Query: 821 VVEKCLEYGDTTERQLLIAEIVGHDEQSDNLL 852
VVEKCL + R +I E++ D D LL
Sbjct: 663 VVEKCLVVFNDENRAKIIHELLS-DPHFDLLL 693
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 648 GSPKQRKELANRLV---GQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCV 704
GSP + N L+ G I ++ G R +Q+ + +E + +E+ G+V+ +
Sbjct: 412 GSPFTMQPKYNSLMEARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELM 471
Query: 705 RDQNGNHVIQKCIESIPTE-KIGFIISAFR--GQVPILSMHPYGCRVIQRVLEHCSDEVQ 761
GN++I+K ++ E ++ I+ + GQ+ +S++ +G RV+Q+++E + Q
Sbjct: 472 MSPFGNYLIRKLLDVCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQ 531
Query: 762 CQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNV 821
+V + L +D GN+V QH LE + + I + H ++++ H+ V
Sbjct: 532 VSLVVSALEPGFLILIKDNNGNHVVQHCLEYLRNGDNKFIFVAAARHCIDIATHQHGCCV 591
Query: 822 VEKCLEYGDTTERQLLIAEI 841
+ KC+ Y RQ L+AEI
Sbjct: 592 LPKCIRYSSGEHRQRLVAEI 611
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 3/184 (1%)
Query: 572 LEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKL 631
LE L++G + F + ++ + HG + + E + + E+ +A L
Sbjct: 560 LEYLRNGDNK-FIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLL 618
Query: 632 MTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQ 691
D +GNYV+Q ++ P L + G + +S+Q + RV++K L V + E + +
Sbjct: 619 AQDKYGNYVVQYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAK 678
Query: 692 LVHEL--DGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
++HEL D + ++D + N+VIQK + ++ I PY ++
Sbjct: 679 IIHELLSDPHFDLLLQDPHANYVIQKALRHSEGHVYNLLVEKIESYKAICRNSPYSKKIF 738
Query: 750 QRVL 753
L
Sbjct: 739 SHKL 742
>Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:26380049-26384328 | 20130731
Length = 712
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 145/263 (55%), Gaps = 8/263 (3%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
L ++ Y+ + D +G RF+Q E VED +VF V+ + +LM D FGNY++QK
Sbjct: 393 LPELQSYMFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKL 452
Query: 645 FEYGSPKQRKELA---NRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHE--LDGN 699
E+ QR ++ ++ GQ++ S +G R +QK + + +++ LV L G
Sbjct: 453 LEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPG- 511
Query: 700 VMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDE 759
+ V+D NGNHVIQ+C+ + FI A + ++ H +GC V+QR ++ S
Sbjct: 512 FLDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDF-SKG 570
Query: 760 VQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFAS 819
+ +V EI + SLAQD YGNYV Q+++E P +++ + G+ V LS KF+S
Sbjct: 571 KSLEKLVKEICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSS 630
Query: 820 NVVEKCLEYGDTTERQLLIAEIV 842
+VVEKCL Y T R ++ E++
Sbjct: 631 HVVEKCLIYIVET-RARIVQELL 652
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 6/245 (2%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDK-ALVFKEVLPHASKLMTDVFGNYVIQK 643
L+ + G +V S + HG+R +Q+ T + ALV +LP L+ D+ GN+VIQ+
Sbjct: 468 LTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPGFLDLVKDLNGNHVIQR 527
Query: 644 FFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRC 703
S + + + + + ++ +GC V+Q+ ++ + +LV E+ +
Sbjct: 528 CLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVKEICKHGFSL 587
Query: 704 VRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQ 763
+D GN+VIQ IE + + F+G ILS + V+++ L + E + +
Sbjct: 588 AQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKCLIYIV-ETRAR 646
Query: 764 FIVDEILESSC--SLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNV 821
IV E+L L QD Y NYV Q LE K + ++ + H + L + +
Sbjct: 647 -IVQELLSVPHFERLLQDPYANYVVQKALEYTKGSLHASLVEAVRAHKI-LRTSPYCKRI 704
Query: 822 VEKCL 826
K L
Sbjct: 705 FSKTL 709
>Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr3:47305805-47309075 | 20130731
Length = 554
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS 649
G + + D HGS+ +Q+ E G E + F E++ H +LM D G VI K E +
Sbjct: 214 GRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVEVCN 273
Query: 650 PKQRKELANRLV---GQILPLSLQMYGCRVIQKALE-VIDIEQKVQLVHELDGNVMRCVR 705
Q+ ++ + Q + + L ++G R ++K LE V EQ+ ++ L + +
Sbjct: 274 QDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGAIVLSK 333
Query: 706 DQNGNHVIQKCIESIP---TEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQC 762
D NG+ V+ C+++ P TEK +I+ R + LS GC V+Q + H +
Sbjct: 334 DINGHRVVFNCLKNFPHADTEKFLGVIA--RNSLS-LSRDKTGCCVLQYCVSHAQGATK- 389
Query: 763 QFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVV 822
++ EI+ + LA+D YGNYV QH++ P + +L V LS +K+ SNVV
Sbjct: 390 NLLIHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVV 449
Query: 823 EKCLEYGDTTERQLLIAEIV 842
EK L +I E++
Sbjct: 450 EKFLHDSGVDISSCIIIELL 469
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 662 GQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIP 721
G++ L+ +G +++Q+ +E + E EL ++ + D G VI K +E
Sbjct: 214 GRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVEVCN 273
Query: 722 TEK---IGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQ 778
++ I +++ Q + + +G R ++++LE + Q I+ + + L++
Sbjct: 274 QDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGAIVLSK 333
Query: 779 DQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLI 838
D G+ V + L+ + + +G ++ + + LS+ K V++ C+ + + LLI
Sbjct: 334 DINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKNLLI 393
Query: 839 AEIVGH 844
EI+ H
Sbjct: 394 HEIILH 399
>Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:25781137-25777781 | 20130731
Length = 349
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 123/235 (52%), Gaps = 10/235 (4%)
Query: 612 CGVEDKALV-----FKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLV---GQ 663
C V D L+ F EV+ K D F + ++Q E+G QR ++ +L Q
Sbjct: 8 CLVVDWTLIDIDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQ 67
Query: 664 ILPLSLQMYGCRVIQKALEVIDIEQKVQLV-HELDGNVMRCVRDQNGNHVIQKCIESIPT 722
++ SL YG + +QK + + ++++ LV + L + V D +GN V+Q+C+
Sbjct: 68 LVEASLDSYGTKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSV 127
Query: 723 EKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYG 782
E FI A ++ +GC ++QR +E + Q Q +V EI + + LAQ +YG
Sbjct: 128 EDNEFIYDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQ-QKLVKEICKYAFHLAQHEYG 186
Query: 783 NYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLL 837
N++ Q++++ P +++ + +G V+LS KF+ +VVEKCLE+ T +++
Sbjct: 187 NHIVQYIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIV 241
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 596 SADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKE 655
+ D HG +Q+ E + + KE+ +A L +GN+++Q + +P E
Sbjct: 145 ATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYIIQMQNPSAIAE 204
Query: 656 LANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDG--NVMRCVRDQNGNHVI 713
L + G+ + LS+Q + V++K LE I +E + ++V E ++D N+V+
Sbjct: 205 LTAQFNGKYVQLSMQKFSIHVVEKCLEHI-VETRARIVQEFLAVPYFENLLQDPYANYVV 263
Query: 714 QKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVL 753
Q ++ ++ R IL PY CR+++ L
Sbjct: 264 QCALKFTEGSLHESLVETVRSH-KILHTGPY-CRLLEEFL 301
>Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC |
chr1:48418651-48415981 | 20130731
Length = 465
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 10/265 (3%)
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS 649
G +V + + R+IQQK D AL+ EV LMT +GN++IQK FE
Sbjct: 134 GSLVSMAMNRRDCRYIQQKIRMGNPTDVALILYEVKDSLHMLMTHPYGNHLIQKIFEARR 193
Query: 650 PKQRKELANRLVGQILP-------LSLQMYGCRVIQKALEVID-IEQKVQLVHELDGNVM 701
++ + LV I+ + + +G RV+Q L+ I + + +V+ + +
Sbjct: 194 GIITRDQKHSLVYLIISNYQKLRNVCMDFHGTRVMQIMLKNIKCLFMQYVVVYTMKHITV 253
Query: 702 RCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQ 761
+++ NG++VI +C++ P E I+ +S + G VIQ+ L +
Sbjct: 254 ALMKNFNGSYVIVECLKLFPPEHQNIILDEVARNCVDISTNKVGTSVIQKCLRKGAITAI 313
Query: 762 CQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNV 821
+V +I+ ++ LA+DQYGNYV + V+ Q++ L G V LS +K+ASNV
Sbjct: 314 AP-LVAKIISNAMILAEDQYGNYVLKCVIMMKFASANEQMVKELRGQFVRLSVNKYASNV 372
Query: 822 VEKCLEYGDTTERQLLIAEIV-GHD 845
VE L + + ++++ EI+ HD
Sbjct: 373 VENLLTFSKLDDVEVIVEEIISSHD 397
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 7/242 (2%)
Query: 598 DPHGSRFIQQKFETCGVEDKALVFKEVLPHAS-KLMTDVFGNYVIQKFFEYGSPKQRKEL 656
D HG+R +Q + V + H + LM + G+YVI + + P+ + +
Sbjct: 221 DFHGTRVMQIMLKNIKCLFMQYVVVYTMKHITVALMKNFNGSYVIVECLKLFPPEHQNII 280
Query: 657 ANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKC 716
+ + + +S G VIQK L I LV ++ N M DQ GN+V++
Sbjct: 281 LDEVARNCVDISTNKVGTSVIQKCLRKGAITAIAPLVAKIISNAMILAEDQYGNYVLKCV 340
Query: 717 IESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCS-DEVQCQFIVDEILESS-- 773
I ++ RGQ LS++ Y V++ +L D+V+ IV+EI+ S
Sbjct: 341 IMMKFASANEQMVKELRGQFVRLSVNKYASNVVENLLTFSKLDDVE--VIVEEIISSHDF 398
Query: 774 CSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLE-YGDTT 832
++ QD +GNYV Q L+ + R ++ + + L H + V+ + YG
Sbjct: 399 LNVLQDPFGNYVAQRSLKCTQGHLRRKLSNLIISNHRTLHSHPYGKKVLTMANDIYGKKV 458
Query: 833 ER 834
R
Sbjct: 459 HR 460
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 648 GSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQ 707
+ QR + G ++ +++ CR IQ+ + + + +++E+ ++ +
Sbjct: 120 ATAAQRMHCFHTCRGSLVSMAMNRRDCRYIQQKIRMGNPTDVALILYEVKDSLHMLMTHP 179
Query: 708 NGNHVIQKCIES---IPTEK-----IGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDE 759
GNH+IQK E+ I T + IIS ++ ++ + M +G RV+Q +L+
Sbjct: 180 YGNHLIQKIFEARRGIITRDQKHSLVYLIISNYQ-KLRNVCMDFHGTRVMQIMLK----N 234
Query: 760 VQCQF----IVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQH 815
++C F +V + + +L ++ G+YV L+ P+ ++ I+ ++ + V++S +
Sbjct: 235 IKCLFMQYVVVYTMKHITVALMKNFNGSYVIVECLKLFPPEHQNIILDEVARNCVDISTN 294
Query: 816 KFASNVVEKCLEYGDTTERQLLIAEIV 842
K ++V++KCL G T L+A+I+
Sbjct: 295 KVGTSVIQKCLRKGAITAIAPLVAKII 321
>Medtr1g100230.1 | pumilio-like protein | LC |
chr1:45172367-45174672 | 20130731
Length = 416
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 10/259 (3%)
Query: 592 IVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS-- 649
++ + D G +++Q K E D + V H +LMT NY+I+K F+ S
Sbjct: 94 VLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTH-NNNYLIKKIFQARSGV 152
Query: 650 -PKQRKELANRLVG---QILPLSLQMYGCRVIQKALEVIDIEQKVQ--LVHELDGNVMRC 703
P+Q + + ++ ++ + + G RV+Q L+ I + +V + +
Sbjct: 153 TPEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRITLAL 212
Query: 704 VRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQ 763
V+ NG +VI +C++ +E I+ ++ GC +IQ+ L V+
Sbjct: 213 VKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVK-S 271
Query: 764 FIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVE 823
+V EI+ ++ LA+D YGNYV Q V+ R ++I +L G S K +SNVVE
Sbjct: 272 LLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVE 331
Query: 824 KCLEYGDTTERQLLIAEIV 842
L + + + +++ EI+
Sbjct: 332 DLLRFSNENDVAVIVEEIM 350
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 637 GNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHEL 696
G YVI + ++ + ++ + +++ + ++ GC +IQK L +++ K LV E+
Sbjct: 218 GGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVKSLLVTEI 277
Query: 697 DGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHC 756
N M D GN+V+Q I + +I RG+ SM + V++ +L
Sbjct: 278 ISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVEDLLRF- 336
Query: 757 SDEVQCQFIVDEILESS--CSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQ 814
S+E IV+EI++S ++ QD +GNYV Q L+ K + ++ ++ + L
Sbjct: 337 SNENDVAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCTKGRLHRELAKLITSNKRILQS 396
Query: 815 HKFASNVV 822
H + V+
Sbjct: 397 HLYGKRVL 404
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 581 RRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYV 640
+R L + V+ + D G IQ+ K+L+ E++ +A L D +GNYV
Sbjct: 234 KRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVKSLLVTEIISNAMILAEDPYGNYV 293
Query: 641 IQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHEL--DG 698
+Q S R+++ +L G+ S+ + V++ L + +V E+
Sbjct: 294 LQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVEDLLRFSNENDVAVIVEEIMKSC 353
Query: 699 NVMRCVRDQNGNHVIQ---KCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+ + V+D GN+V Q KC + ++ +I++ + IL H YG RV+
Sbjct: 354 DFLNVVQDPFGNYVAQRALKCTKGRLHRELAKLITSNK---RILQSHLYGKRVL 404
>Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:729409-732877 | 20130731
Length = 434
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFE--Y 647
G++V + + +++Q + ++ EV + +LMT FG+Y+IQK F+
Sbjct: 107 GFVVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARR 166
Query: 648 GSPKQRKELANRLV----GQILPLSLQMYGCRVIQKAL-EVIDIEQKVQLVHELDGNVMR 702
G Q+ +L L+ ++ + + +G R +Q + V +V+ L +
Sbjct: 167 GMTCQQMDLTVFLIISNHRKLKDVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIP 226
Query: 703 CVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQC 762
+++ NG++VI +C++ P + I+ ++ GC +++ L++
Sbjct: 227 LMKNVNGSYVIVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTSAI 286
Query: 763 QFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVV 822
+V +I+ ++ L++D YGNYV Q V++ P Q++ L LS +K+ASNVV
Sbjct: 287 DILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNVV 346
Query: 823 EKCLEYGDTTERQLLIAEIV 842
E L + + +++ EI+
Sbjct: 347 EYLLSFSNQDAVKVIAEEIM 366
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 17/250 (6%)
Query: 594 EFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASK-LMTDVFGNYVIQKFFEYGSPKQ 652
+ D HG+R +Q V +L H + LM +V G+YVI + ++ PK
Sbjct: 189 DVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIPLMKNVNGSYVIVQCVKFFPPKH 248
Query: 653 RKELANRLVGQILPLSLQMYGCRVIQKALE------VIDIEQKVQLVHELDGNVMRCVRD 706
+K + + + + ++ GC ++K L+ IDI LV ++ N M D
Sbjct: 249 KKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTSAIDI-----LVAQIISNAMILSED 303
Query: 707 QNGNHVIQKCIE-SIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFI 765
GN+V+Q+ I+ IP ++ R + LS++ Y V++ +L S++ + I
Sbjct: 304 PYGNYVVQRVIQMKIPLANEQ-MVQELRSKFDRLSVNKYASNVVEYLLSF-SNQDAVKVI 361
Query: 766 VDEILESS--CSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVE 823
+EI+ S ++ D YGNYV Q L K R + + H + L H + NV+
Sbjct: 362 AEEIMRSRNFLNVLHDPYGNYVAQRALRCTKGHVRRRFSSLIKSHRLALQSHIYGKNVLT 421
Query: 824 KCLEYGDTTE 833
+ Y + +E
Sbjct: 422 LAMAYTEGSE 431
>Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484 |
20130731
Length = 379
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 21/261 (8%)
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGS 649
G +V + +++ + + A++ +V + LM FG+ +I+K FE
Sbjct: 114 GSVVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFE-AK 172
Query: 650 PKQRKELANRLVGQILP-------LSLQMYGCRVIQKALE-VIDIEQKVQLVHELDGNVM 701
E + +V IL + + YG RV+Q L K + + + N
Sbjct: 173 KGMAMEQMDSIVYLILANDRKMWDVCINYYGTRVMQTILHNTRHPFMKFVVAYAVKRNTT 232
Query: 702 RCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQ 761
+++ NG+HVI +C++ P+ I+ ++ GC ++R L+H +
Sbjct: 233 ALMKNTNGSHVIVQCVKLFPSILKKMILDEVARNCCNIATDKIGCLAVKRCLKH-GEGTA 291
Query: 762 CQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNV 821
+V +I+ N + +V++ P + +I LS +K+ASNV
Sbjct: 292 IDLLVTQII-----------SNAMVLYVIKMKFPLAKEWMIEEFQNKFDRLSMNKYASNV 340
Query: 822 VEKCLEYGDTTERQLLIAEIV 842
+E L + + + ++++ EI+
Sbjct: 341 MEYLLRFSNKSAVKVIVEEIM 361
>Medtr4g120470.1 | pumilio-like protein | HC |
chr4:49940997-49933657 | 20130731
Length = 639
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
L+ + G I E + SR +Q + C ++ VF+E+ PH L + ++++K
Sbjct: 110 LTKMKGKIHEIAGSHITSRVLQTCVKHCSQAERDQVFEELRPHFLNLAYSAYAVHLVKKM 169
Query: 645 FEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCV 704
+ S KQ + L G + PL M G V++ A ++ QK +L+ EL ++
Sbjct: 170 LDNASKKQLAGFISTLRGHVAPLLRHMVGSVVVEHAYDLASAAQKQELLLELYSTELQLF 229
Query: 705 RDQNGNHVIQKCIESIPTEKIGFI------------ISAFRGQV--PILSMHPYGCRVIQ 750
+D +P ++ + +S +V PIL ++
Sbjct: 230 KDL------------VPAKETRLLDVMSKLGLQKGSVSRHMSKVIQPILEKGIVDHSILH 277
Query: 751 RV-LEHCSDEVQCQFIVDEILESSCS-----LAQDQYGNYVTQHVLERGKPQERSQIIGR 804
RV LE+ S + + V EI++ S + + G + ++ G +ER +II
Sbjct: 278 RVLLEYFS--IADKTSVAEIIQQLSSPLLIRMIGTKDGAKIGILCVKYGNAKERKKIIKG 335
Query: 805 LSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQS 848
L GHI + + H++ V+ L D T+ LI +++ + QS
Sbjct: 336 LKGHIGKTAYHQYGCMVLVSILSVVDDTK---LITKVIIRELQS 376