Miyakogusa Predicted Gene
- Lj4g3v2122820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2122820.1 Non Chatacterized Hit- tr|I1MH11|I1MH11_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,67.41,0,PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; PUMILIO 1,
2,NULL; RNA BINDING PR,CUFF.50294.1
(853 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 580 e-165
AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 564 e-160
AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 564 e-160
AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 | chr3:7059098-70... 521 e-148
AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-1... 393 e-109
AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071... 392 e-109
AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 | chr2:12544260-1... 392 e-109
AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 | chr2:12531392-1... 390 e-108
AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 | chr3:3211276-32... 382 e-106
AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 | chr1:7853084-78... 173 4e-43
AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 | chr1:29407900-2... 171 2e-42
AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 | chr5:2288172... 154 2e-37
AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 | chr4:5631298... 140 3e-33
AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 | chr1:13227324-1... 132 1e-30
AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 | chr1:1325339... 123 6e-28
AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 | chr4:5450434... 65 1e-10
AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 | chr5:1729593... 65 2e-10
AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 | chr5:2391414... 60 8e-09
AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 | chr1:1333051... 57 6e-08
AT3G16810.1 | Symbols: APUM24, PUM24 | pumilio 24 | chr3:5723436... 56 1e-07
AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 | chr5:1730984... 56 1e-07
AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 | chr1:7579129... 52 2e-06
>AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=861
Length = 861
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 390/905 (43%), Positives = 501/905 (55%), Gaps = 159/905 (17%)
Query: 1 MATESPIRISEAGGKWPTLKEAATFGSPSRNVATEDLAVLLKSHRFCGNGRDAVPNRSGS 60
MATE+PIRIS + +W S SR V+ VPNRSGS
Sbjct: 1 MATENPIRISGSNERW----------SNSRKVS--------------------VPNRSGS 30
Query: 61 APPSMEGSFMASNNLLSQNKAQNVDLLTLNR-----AMKKYDTGKDSF------------ 103
APP+MEGSF+A +NLLS+ + L L R + + + K S
Sbjct: 31 APPNMEGSFLAVDNLLSRQGGSVYNNLMLPRYGFEEPVTTHPSSKHSLNRIPSPPIYYPT 90
Query: 104 -------------------------HLSQGTLATPKEESEDDSPQQPYDDEL-DKASGIW 137
HLSQG L+T KE SED+S QQ + + D+ G+
Sbjct: 91 EYQFIDNRVGRFRSNQGLNKVNSPIHLSQGKLSTHKEVSEDESSQQLSVNSVSDRTDGLD 150
Query: 138 HRQDAASVT-SQHKNEDLPHTMSPVYNKSLGVVDEVIDLD-AGSSSSQDPAVITLDSAKP 195
R S + + + +D +P +++S EV D +G+ S V+ D+A
Sbjct: 151 IRLSPGSQSLADFRQDDTSSGQTPQHSRSNSSNGEVNTADESGNFSELSDDVVVKDNAAS 210
Query: 196 TVGADDIRLSTNVDXXXXXXXXXXXXXXXXXXXXDLDVTVIESQLRALSVSNLPNSERQS 255
T A D + I S++++ ++S P + +
Sbjct: 211 TARAS------------------------IGNEKSPDESTIISKMKSTNISG-PGTAKYP 245
Query: 256 CEDKWNNSCQNKLIQHQQQNNPREV---PSTNSQSEKYTFGGTVQFIH-NPSKFSSDVHP 311
E ++ Q + HQQQNN + + S G QF + P KFS D P
Sbjct: 246 REPRYG---QPERQPHQQQNNATWIQGGSNMGSHGVNDAVIGAGQFHYGQPYKFSGDGQP 302
Query: 312 VLQSSGLTPPL--HAPAAAYMTSTNPFYGNLQASGVYSPQYVGGXXXXXXXXXXXXXXXX 369
VLQSSG TPPL A AYMTS Y N+Q+ VYSPQY G
Sbjct: 303 VLQSSGFTPPLLYTATQTAYMTSPAHVY-NMQSPAVYSPQY--GYGPYTNMIPQFMPGYP 359
Query: 370 XHGTVPFLVDGAIGSSFTLQAPGISTGGNISHGAEMLPASKLLGQYGFPLQPSFGDSMYM 429
HG+VP +V F Q G S G++ HG EM A KL Y P QPSF D MYM
Sbjct: 360 SHGSVPVVVS----PDFIPQLSGPS-AGSVVHGGEMQYAEKL---YVPPGQPSFPDPMYM 411
Query: 430 QYHQQPFAEGYGVSGHLLTPRPSVGSQSDPFDSQKWPNSGAYLDDKKVHYQGNG-AHLNS 488
QY QQ F + L PR + ++ +SQK DD K Q G ++ N
Sbjct: 412 QYCQQSFGQM-----EPLAPR----NHTNAPESQK--------DDPKFLRQIRGPSNSNM 454
Query: 489 SRGGLMIPSYFGHPPNMRFVMQNXXXXXXXXXXXAYQESNPGLPGGRNEMKVSPVSGRHG 548
+R G+ + +Y+G PNM ++Q Y ++ G P +SP +
Sbjct: 455 ARPGMGV-NYYGIQPNMGIMVQ-------------YLPTHLGPP-------LSPGHVPYV 493
Query: 549 GILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQK 608
GWQ + + + A P++ NFLE+LKSGKGRRF+LSDI G+IVEFSAD HGSRFIQQK
Sbjct: 494 EAYPGWQPQGSLEGANGPRLCNFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQK 553
Query: 609 FETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLS 668
E C E+KA VF+E+LPHA KLMTDVFGNYVIQKFFEYG+ QRKELA++L+GQI+PLS
Sbjct: 554 LENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLS 613
Query: 669 LQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFI 728
LQMYGCRVIQKAL+VI+ +Q+V+L ELDG VMRCVRDQNGNHVIQKCIE+IP +K+GF+
Sbjct: 614 LQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFM 673
Query: 729 ISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQH 788
+ AFRGQV LSMHPYGCRVIQR+LE CS + QC+FI +EILES C L++DQYGNYVTQH
Sbjct: 674 LYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQH 733
Query: 789 VLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQS 848
VLE+G +ER +I +LSGHIV+LS HKFASNV+EKCLEYG ER L+I EI G DE
Sbjct: 734 VLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESY 793
Query: 849 DNLLV 853
++LL+
Sbjct: 794 NSLLM 798
>AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159070 FORWARD LENGTH=858
Length = 858
Score = 564 bits (1453), Expect = e-160, Method: Compositional matrix adjust.
Identities = 385/905 (42%), Positives = 496/905 (54%), Gaps = 165/905 (18%)
Query: 1 MATESPIRISEAGGKWPTLKEAATFGSPSRNVATEDLAVLLKSHRFCGNGRDAVPNRSGS 60
MATE+PIRIS + +W S SR V+ VPNRSGS
Sbjct: 1 MATENPIRISGSNERW----------SNSRKVS--------------------VPNRSGS 30
Query: 61 APPSMEGSFMASNNLLSQNKAQNVDLLTLNR-----AMKKYDTGKDSF------------ 103
APP+MEGSF+A +NLLS+ + L L R + + + K S
Sbjct: 31 APPNMEGSFLAVDNLLSRQGGSVYNNLMLPRYGFEEPVTTHPSSKHSLNRIPSPPIYYPT 90
Query: 104 -------------------------HLSQGTLATPKEESEDDSPQQPYDDEL-DKASGIW 137
HLSQG L+T KE SED+S QQ + + D+ G+
Sbjct: 91 EYQFIDNRVGRFRSNQGLNKVNSPIHLSQGKLSTHKEVSEDESSQQLSVNSVSDRTDGLD 150
Query: 138 HRQDAASVT-SQHKNEDLPHTMSPVYNKSLGVVDEVIDLD-AGSSSSQDPAVITLDSAKP 195
R S + + + +D +P +++S EV D +G+ S V+ D+A
Sbjct: 151 IRLSPGSQSLADFRQDDTSSGQTPQHSRSNSSNGEVNTADESGNFSELSDDVVVKDNAAS 210
Query: 196 TVGADDIRLSTNVDXXXXXXXXXXXXXXXXXXXXDLDVTVIESQLRALSVSNLPNSERQS 255
T A D + I S++++ ++S P + +
Sbjct: 211 TARAS------------------------IGNEKSPDESTIISKMKSTNISG-PGTAKYP 245
Query: 256 CEDKWNNSCQNKLIQHQQQNNPREV---PSTNSQSEKYTFGGTVQFIH-NPSKFSSDVHP 311
E ++ Q + HQQQNN + + S G QF + P KFS D P
Sbjct: 246 REPRYG---QPERQPHQQQNNATWIQGGSNMGSHGVNDAVIGAGQFHYGQPYKFSGDGQP 302
Query: 312 VLQSSGLTPPL--HAPAAAYMTSTNPFYGNLQASGVYSPQYVGGXXXXXXXXXXXXXXXX 369
VLQSSG TPPL A AYMTS Y N+Q+ VYSPQY G
Sbjct: 303 VLQSSGFTPPLLYTATQTAYMTSPAHVY-NMQSPAVYSPQY--GYGPYTNMIPQFMPGYP 359
Query: 370 XHGTVPFLVDGAIGSSFTLQAPGISTGGNISHGAEMLPASKLLGQYGFPLQPSFGDSMYM 429
HG+VP +V F Q G S G++ HG EM A KL Y P QPSF D MYM
Sbjct: 360 SHGSVPVVVS----PDFIPQLSGPS-AGSVVHGGEMQYAEKL---YVPPGQPSFPDPMYM 411
Query: 430 QYHQQPFAEGYGVSGHLLTPRPSVGSQSDPFDSQKWPNSGAYLDDKKVHYQGNG-AHLNS 488
QY QQ F + L PR + ++ +SQK DD K Q G ++ N
Sbjct: 412 QYCQQSFGQM-----EPLAPR----NHTNAPESQK--------DDPKFLRQIRGPSNSNM 454
Query: 489 SRGGLMIPSYFGHPPNMRFVMQNXXXXXXXXXXXAYQESNPGLPGGRNEMKVSPVSGRHG 548
+R G+ + +Y+G PNM ++Q Y ++ G P +SP +
Sbjct: 455 ARPGMGV-NYYGIQPNMGIMVQ-------------YLPTHLGPP-------LSPGHVPYV 493
Query: 549 GILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQK 608
GWQ + + + A P++ NFLE+LKSGKGRRF+LSDI G+IVEFS RFIQQK
Sbjct: 494 EAYPGWQPQGSLEGANGPRLCNFLEELKSGKGRRFDLSDITGHIVEFS------RFIQQK 547
Query: 609 FETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLS 668
E C E+KA VF+E+LPHA KLMTDVFGNYVIQKFFEYG+ QRKELA++L+GQI+PLS
Sbjct: 548 LENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLS 607
Query: 669 LQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFI 728
LQMYGCRVIQKAL+VI+ +Q+V+L ELDG VMRCVRDQNGNHVIQKCIE+IP +K+GF+
Sbjct: 608 LQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFM 667
Query: 729 ISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQH 788
+ AFRGQV LSMHPYGCRVIQR+LE CS + QC+FI +EILES C L++DQYGNYVTQH
Sbjct: 668 LYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQH 727
Query: 789 VLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQS 848
VLE+G +ER +I +LSGHIV+LS HKFASNV+EKCLEYG ER L+I EI G DE
Sbjct: 728 VLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESY 787
Query: 849 DNLLV 853
++LL+
Sbjct: 788 NSLLM 792
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 583 FELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKA-LVFKEVLPHASKLMTDVFGNYVI 641
F L G + S P+G R IQ+ E C + + + +E+L L D +GNYV
Sbjct: 666 FMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVT 725
Query: 642 QKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDG--- 698
Q E G+ ++R+ + +L G I+ LSL + VI+K LE ++ ++ E+ G
Sbjct: 726 QHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDE 785
Query: 699 ---NVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRV 752
+++ ++DQ GN+V+QK E+ ++ + S R L + YG ++ R+
Sbjct: 786 SYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRVRMHASALKKYTYGKHIVSRL 842
>AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=855
Length = 855
Score = 564 bits (1453), Expect = e-160, Method: Compositional matrix adjust.
Identities = 385/905 (42%), Positives = 496/905 (54%), Gaps = 165/905 (18%)
Query: 1 MATESPIRISEAGGKWPTLKEAATFGSPSRNVATEDLAVLLKSHRFCGNGRDAVPNRSGS 60
MATE+PIRIS + +W S SR V+ VPNRSGS
Sbjct: 1 MATENPIRISGSNERW----------SNSRKVS--------------------VPNRSGS 30
Query: 61 APPSMEGSFMASNNLLSQNKAQNVDLLTLNR-----AMKKYDTGKDSF------------ 103
APP+MEGSF+A +NLLS+ + L L R + + + K S
Sbjct: 31 APPNMEGSFLAVDNLLSRQGGSVYNNLMLPRYGFEEPVTTHPSSKHSLNRIPSPPIYYPT 90
Query: 104 -------------------------HLSQGTLATPKEESEDDSPQQPYDDEL-DKASGIW 137
HLSQG L+T KE SED+S QQ + + D+ G+
Sbjct: 91 EYQFIDNRVGRFRSNQGLNKVNSPIHLSQGKLSTHKEVSEDESSQQLSVNSVSDRTDGLD 150
Query: 138 HRQDAASVT-SQHKNEDLPHTMSPVYNKSLGVVDEVIDLD-AGSSSSQDPAVITLDSAKP 195
R S + + + +D +P +++S EV D +G+ S V+ D+A
Sbjct: 151 IRLSPGSQSLADFRQDDTSSGQTPQHSRSNSSNGEVNTADESGNFSELSDDVVVKDNAAS 210
Query: 196 TVGADDIRLSTNVDXXXXXXXXXXXXXXXXXXXXDLDVTVIESQLRALSVSNLPNSERQS 255
T A D + I S++++ ++S P + +
Sbjct: 211 TARAS------------------------IGNEKSPDESTIISKMKSTNISG-PGTAKYP 245
Query: 256 CEDKWNNSCQNKLIQHQQQNNPREV---PSTNSQSEKYTFGGTVQFIH-NPSKFSSDVHP 311
E ++ Q + HQQQNN + + S G QF + P KFS D P
Sbjct: 246 REPRYG---QPERQPHQQQNNATWIQGGSNMGSHGVNDAVIGAGQFHYGQPYKFSGDGQP 302
Query: 312 VLQSSGLTPPL--HAPAAAYMTSTNPFYGNLQASGVYSPQYVGGXXXXXXXXXXXXXXXX 369
VLQSSG TPPL A AYMTS Y N+Q+ VYSPQY G
Sbjct: 303 VLQSSGFTPPLLYTATQTAYMTSPAHVY-NMQSPAVYSPQY--GYGPYTNMIPQFMPGYP 359
Query: 370 XHGTVPFLVDGAIGSSFTLQAPGISTGGNISHGAEMLPASKLLGQYGFPLQPSFGDSMYM 429
HG+VP +V F Q G S G++ HG EM A KL Y P QPSF D MYM
Sbjct: 360 SHGSVPVVVS----PDFIPQLSGPS-AGSVVHGGEMQYAEKL---YVPPGQPSFPDPMYM 411
Query: 430 QYHQQPFAEGYGVSGHLLTPRPSVGSQSDPFDSQKWPNSGAYLDDKKVHYQGNG-AHLNS 488
QY QQ F + L PR + ++ +SQK DD K Q G ++ N
Sbjct: 412 QYCQQSFGQM-----EPLAPR----NHTNAPESQK--------DDPKFLRQIRGPSNSNM 454
Query: 489 SRGGLMIPSYFGHPPNMRFVMQNXXXXXXXXXXXAYQESNPGLPGGRNEMKVSPVSGRHG 548
+R G+ + +Y+G PNM ++Q Y ++ G P +SP +
Sbjct: 455 ARPGMGV-NYYGIQPNMGIMVQ-------------YLPTHLGPP-------LSPGHVPYV 493
Query: 549 GILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQK 608
GWQ + + + A P++ NFLE+LKSGKGRRF+LSDI G+IVEFS RFIQQK
Sbjct: 494 EAYPGWQPQGSLEGANGPRLCNFLEELKSGKGRRFDLSDITGHIVEFS------RFIQQK 547
Query: 609 FETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLS 668
E C E+KA VF+E+LPHA KLMTDVFGNYVIQKFFEYG+ QRKELA++L+GQI+PLS
Sbjct: 548 LENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLS 607
Query: 669 LQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFI 728
LQMYGCRVIQKAL+VI+ +Q+V+L ELDG VMRCVRDQNGNHVIQKCIE+IP +K+GF+
Sbjct: 608 LQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFM 667
Query: 729 ISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQH 788
+ AFRGQV LSMHPYGCRVIQR+LE CS + QC+FI +EILES C L++DQYGNYVTQH
Sbjct: 668 LYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQH 727
Query: 789 VLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQS 848
VLE+G +ER +I +LSGHIV+LS HKFASNV+EKCLEYG ER L+I EI G DE
Sbjct: 728 VLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESY 787
Query: 849 DNLLV 853
++LL+
Sbjct: 788 NSLLM 792
>AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 |
chr3:7059098-7062660 REVERSE LENGTH=961
Length = 961
Score = 521 bits (1343), Expect = e-148, Method: Compositional matrix adjust.
Identities = 369/964 (38%), Positives = 497/964 (51%), Gaps = 184/964 (19%)
Query: 2 ATESPIRISEAG--GKWPTLKEAATFGSPSRNVATEDLAVLLKSHRF-CGNGRDAVPNRS 58
T+S +R+ E W ++ FGS ++A EDL L+K +R G+ P+RS
Sbjct: 3 TTQSAMRMVEGDHIKNWQASSDSGIFGS--LDMAVEDLGFLMKRNRLDSGDQTGKFPSRS 60
Query: 59 GSAPPSMEGSFMASNNLLSQNKAQNVDLLTLNRAMKKYDT-------------------- 98
SAPPSMEGSF A NLL Q + + ++L+ RA++ YD+
Sbjct: 61 ESAPPSMEGSFAALRNLLKQQEGSSSEVLS--RAIENYDSEEEIRSDPAYVAYYLSNINL 118
Query: 99 ---------GKDSFHL--------------------------SQGTLATPKEESEDDSP- 122
+++ HL S+ L+T +EE ED++
Sbjct: 119 NPRLPPPLISRENQHLLRHFGDNNQSPTTSWDNMGIRSSLHSSRTALSTHREEPEDEASS 178
Query: 123 --QQPYDDELDKASGIWHRQDAASVTSQHKNEDLPHTMSPVYNKSLGVVDEVI--DLDAG 178
QQ Y AS R+ A + ED P T+S V+ + + I D+ A
Sbjct: 179 GEQQSY------ASLAGRRKSIADMI----QEDFPLTLSSVFKRPHSAGNRPIAQDIHAI 228
Query: 179 SSSS----------QDPAVITLDSAKPTVGADDIR----LSTNVDXXXXXXXXXXXXXXX 224
SS + D + L ++ +D I +T++
Sbjct: 229 SSDTSSEHARRLPESDINSVNLLRETDSLSSDAIASEDPFTTDLASQSFTNAQTERLNAR 288
Query: 225 XXXXXDLDVTVIESQLRALSVSNLPNSERQSCEDKWNNSCQNKLIQHQQQNNPREVPSTN 284
D +++V A S++ + R++ ED+ + Q + + Q + +V +++
Sbjct: 289 QASHEDNNLSV----FGASPPSSVASRMRRNQEDQQS---QGRRMPPQYTPSSYQVQASS 341
Query: 285 SQSEKY-TFGGTVQFIHNPSKFSS-DVHPVLQS-SGLT-PPLHAPAAAYMTSTNPFY-GN 339
Q Y GGT + + K ++ +VH QS GL PP++ AAYMTS +PFY N
Sbjct: 342 PQQMSYPRIGGTQDMMQSLPKIATGEVHSTFQSPHGLAPPPMYTSTAAYMTSLSPFYHQN 401
Query: 340 LQASGVYSPQYVGGXXXXXXXXXXXXXXXXXHGTVPFLVDGAIGSSFTLQAP-GISTGGN 398
Q+SG++ PQY G G VP + G T+ P IS+ +
Sbjct: 402 FQSSGMFVPQYNYGGYPPAS------------GIVPQYMSGYPSHEATVPMPYDISSTSS 449
Query: 399 ISHGAEMLPASKLLGQYGFPLQPSFGDSMYMQYHQQPFAEGYGVSGHLLTPRPSVGSQSD 458
+ +LP GQ PS D +QY QQ + Y P S +D
Sbjct: 450 GYNNPRLLPGVSSSGQN----IPSLVDPFQLQYFQQAQVDAYA---------PPFQSSTD 496
Query: 459 PFDSQKWPNSGAYLDDKKVHYQGNGAHLNSSRG---GLMIP----SYFGHPPNMRFVMQN 511
F + D + V Y N LNS GL P +YF PP +R + Q
Sbjct: 497 SFGQK---------DQQAVGYMANHEPLNSPLSPGYGLQSPRHMGNYFAVPPGVRVMPQ- 546
Query: 512 XXXXXXXXXXXAYQESNPGLPGGRNEMKVSPVSG-------------------RHGGIL- 551
PG P M SPV G R+ GI
Sbjct: 547 ----------------YPGSPLASPVMPSSPVGGMMSHFGRRSETRYHQQGPSRNTGIYP 590
Query: 552 SGWQGRRTFDSAY--DPKIVNFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKF 609
GWQG R S+ D K +FL++LKS R+ ELSDI G +VEFS D HGSRFIQQK
Sbjct: 591 GGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKL 650
Query: 610 ETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSL 669
E C E+KA VF EVLP ASKLMTDVFGNYVIQKF E+G+P QR+EL +L GQ++ LSL
Sbjct: 651 EHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSL 710
Query: 670 QMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFII 729
QMYGCRVIQKALEVID++QK +L+ ELDGNV++CVRDQNGNHVIQKCIES+P +IGF+I
Sbjct: 711 QMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVI 770
Query: 730 SAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHV 789
+AFRGQV LS HPYGCRVIQR+LEHCSD+ + I+DEILES+ +LA DQYGNYVTQHV
Sbjct: 771 AAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHV 830
Query: 790 LERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSD 849
LERGKP ER QII +L+G++V++SQHK+ASNVVEKCLE+ D+TER+ LI EI+G E+ +
Sbjct: 831 LERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEEDN 890
Query: 850 NLLV 853
+LL
Sbjct: 891 HLLA 894
>AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 |
chr2:12549483-12553185 REVERSE LENGTH=968
Length = 968
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 6/326 (1%)
Query: 529 PGLPGGRNEMKVS-PVSGRH--GGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFEL 585
P P R+E+ + P + R+ GG++ W +FD + + LE+ KS K R FEL
Sbjct: 572 PYSPMRRDEVNMRFPSATRNYSGGLMGSWHMDASFDEGFGSSM---LEEFKSNKTRGFEL 628
Query: 586 SDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFF 645
S+I G++VEFS+D +GSRFIQQK ET ++K +V++E++P A LMTDVFGNYVIQKFF
Sbjct: 629 SEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFF 688
Query: 646 EYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVR 705
E+G P QR+ELA +L +LPLSLQMYGCRVIQKA+EV+D++QK+++V ELDG+VMRCVR
Sbjct: 689 EHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR 748
Query: 706 DQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFI 765
DQNGNHV+QKCIE +P E I FIIS F G V LS HPYGCRVIQRVLEHC D +
Sbjct: 749 DQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKV 808
Query: 766 VDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKC 825
++EIL + LAQDQYGNYV QHVLE GKP ER+ II L+G IV++SQ KFASNVVEKC
Sbjct: 809 MEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKC 868
Query: 826 LEYGDTTERQLLIAEIVGHDEQSDNL 851
L +G ER+LL+ E++G ++++ L
Sbjct: 869 LTFGGPEERELLVNEMLGTTDENEPL 894
>AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071
REVERSE LENGTH=972
Length = 972
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 242/326 (74%), Gaps = 6/326 (1%)
Query: 529 PGLPGGRNEMKVS-PVSGRH--GGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFEL 585
P P R E+ + P + R+ GG++ W + D + + LE+ KS K R FEL
Sbjct: 576 PCSPMRRGEVNMRYPSATRNYAGGVMGSWHMDASLDEGFGSSM---LEEFKSNKTRGFEL 632
Query: 586 SDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFF 645
++I G++VEFS+D +GSRFIQQK ET ++K +V++E++PHA LMTDVFGNYVIQKFF
Sbjct: 633 AEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFF 692
Query: 646 EYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVR 705
E+G P QR+ELA++L +LPLSLQMYGCRVIQKA+EV+D++QK+++V ELDG+VMRCVR
Sbjct: 693 EHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR 752
Query: 706 DQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFI 765
DQNGNHV+QKCIE +P E I FIIS F G V LS HPYGCRVIQRVLEHC D +
Sbjct: 753 DQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKV 812
Query: 766 VDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKC 825
+DEI+ + LAQDQYGNYV QHVLE GKP ER+ II L+G IV++SQ KFASNVVEKC
Sbjct: 813 MDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKC 872
Query: 826 LEYGDTTERQLLIAEIVGHDEQSDNL 851
L +G ER+ L+ E++G ++++ L
Sbjct: 873 LTFGGPEEREFLVNEMLGTTDENEPL 898
>AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 |
chr2:12544260-12548071 REVERSE LENGTH=972
Length = 972
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 242/326 (74%), Gaps = 6/326 (1%)
Query: 529 PGLPGGRNEMKVS-PVSGRH--GGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFEL 585
P P R E+ + P + R+ GG++ W + D + + LE+ KS K R FEL
Sbjct: 576 PCSPMRRGEVNMRYPSATRNYAGGVMGSWHMDASLDEGFGSSM---LEEFKSNKTRGFEL 632
Query: 586 SDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFF 645
++I G++VEFS+D +GSRFIQQK ET ++K +V++E++PHA LMTDVFGNYVIQKFF
Sbjct: 633 AEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFF 692
Query: 646 EYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVR 705
E+G P QR+ELA++L +LPLSLQMYGCRVIQKA+EV+D++QK+++V ELDG+VMRCVR
Sbjct: 693 EHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR 752
Query: 706 DQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFI 765
DQNGNHV+QKCIE +P E I FIIS F G V LS HPYGCRVIQRVLEHC D +
Sbjct: 753 DQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKV 812
Query: 766 VDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKC 825
+DEI+ + LAQDQYGNYV QHVLE GKP ER+ II L+G IV++SQ KFASNVVEKC
Sbjct: 813 MDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKC 872
Query: 826 LEYGDTTERQLLIAEIVGHDEQSDNL 851
L +G ER+ L+ E++G ++++ L
Sbjct: 873 LTFGGPEEREFLVNEMLGTTDENEPL 898
>AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 |
chr2:12531392-12535060 FORWARD LENGTH=964
Length = 964
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 240/326 (73%), Gaps = 6/326 (1%)
Query: 529 PGLPGGRNEMKVS-PVSGRH--GGILSGWQGRRTFDSAYDPKIVNFLEDLKSGKGRRFEL 585
P P R E+ + P + R+ GG++ W + D + + LE+ KS K R FEL
Sbjct: 568 PYSPMRRGEVNMRYPAATRNYTGGVMGSWHMDASLDEGFGSSM---LEEFKSNKTRGFEL 624
Query: 586 SDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKFF 645
S+I G++VEFS+D +GSRFIQQK ET ++K +V++E++P A LMTDVFGNYVIQKFF
Sbjct: 625 SEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFF 684
Query: 646 EYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVR 705
E+G P QR+EL +L+ +LPLSLQMYGCRVIQKA+EV+D++QK+Q+V ELDG+VMRCVR
Sbjct: 685 EHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVR 744
Query: 706 DQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFI 765
DQNGNHV+QKCIE +P E I FIIS F G V LS HPYGCRVIQRVLEHC + +
Sbjct: 745 DQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKV 804
Query: 766 VDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKC 825
++EIL + L QDQYGNYV QHVLE GKP ER+ II L+G IV++SQ KFASNVVEKC
Sbjct: 805 MEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKC 864
Query: 826 LEYGDTTERQLLIAEIVGHDEQSDNL 851
L +G ER+LL+ E++G ++++ L
Sbjct: 865 LTFGGPEERELLVNEMLGTTDENEPL 890
>AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 |
chr3:3211276-3215144 REVERSE LENGTH=1003
Length = 1003
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 225/281 (80%)
Query: 571 FLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASK 630
LE K+ K R ELS+I+G+++EFS D +GSRFIQQK ET E+K +F E+LP+
Sbjct: 648 LLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRT 707
Query: 631 LMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKV 690
LMTDVFGNYVIQKFFE+G+ KQRKELA ++ G +L LSLQMYGCRVIQKALEV+++EQ+
Sbjct: 708 LMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQA 767
Query: 691 QLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQ 750
++V ELDG+VM+CV DQNGNHVIQKCIE +P + I FIIS+F G+V LS HPYGCRVIQ
Sbjct: 768 RMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQ 827
Query: 751 RVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIV 810
RVLEH D + I++EI++S C+LAQDQYGNYV QH+++ GKP ERS+II +L+G IV
Sbjct: 828 RVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIV 887
Query: 811 ELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHDEQSDNL 851
++SQ KFASNVVEKCL +G ERQ+L+ E++G+ ++++ L
Sbjct: 888 KMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPL 928
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 8/288 (2%)
Query: 556 GRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVE 615
GR + ++ + + K R+ + G+++ S +G R IQ+ E +E
Sbjct: 705 GRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELE 764
Query: 616 DKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCR 675
+A + KE+ K + D GN+VIQK E + + + G++L LS YGCR
Sbjct: 765 QQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCR 824
Query: 676 VIQKALEVI-DIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRG 734
VIQ+ LE I DIE + ++ E+ +V +DQ GN+VIQ I+ + II+ G
Sbjct: 825 VIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAG 884
Query: 735 QVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEIL------ESSCSLAQDQYGNYVTQH 788
Q+ +S + V+++ L E + Q +V+E+L E ++ +D +GNYV Q
Sbjct: 885 QIVKMSQQKFASNVVEKCLTFGGPE-ERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQK 943
Query: 789 VLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQL 836
VLE Q + I+ R+ H+ L ++ + ++V + + T ER++
Sbjct: 944 VLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRI 991
>AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 |
chr1:7853084-7854963 FORWARD LENGTH=515
Length = 515
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 150/258 (58%), Gaps = 5/258 (1%)
Query: 584 ELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQK 643
++S+ GY+ + D HG RF+Q FE D ++F EV+PH +LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 644 FFEYGSPKQRKELANRLV---GQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHE-LDGN 699
+ + +QR ++ + GQ++ +SL YG RV+Q+ +E I +++ LV L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 700 VMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDE 759
+ +RD NGNHVIQ+C++ + TE FI ++ H +GC V+Q+ + + S
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY-SSG 373
Query: 760 VQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFAS 819
+Q + +V EI +S LAQD YGNY Q VLE + ++ +L GH VELS KF+S
Sbjct: 374 LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 820 NVVEKCLEYGDTTERQLL 837
++VE+CL + + Q++
Sbjct: 434 HMVERCLTHCPESRPQIV 451
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 662 GQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIP 721
G + ++ +GCR +Q E + + E+ +V+ + D GN+++QK ++
Sbjct: 201 GYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCN 260
Query: 722 TEK---IGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQ 778
E+ I ++++ GQ+ +S++ YG RV+QR++E Q + + +L +
Sbjct: 261 EEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGFLNLIR 320
Query: 779 DQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLI 838
D GN+V Q L+ ++ I + ++++ H+ V++KC+ Y +R+ L+
Sbjct: 321 DLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLV 380
Query: 839 AEI 841
EI
Sbjct: 381 TEI 383
>AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 |
chr1:29407900-29410184 FORWARD LENGTH=650
Length = 650
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 153/263 (58%), Gaps = 6/263 (2%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
+ DI GY+ + D HG RF+Q+ F+ D ++F EV+ H +LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 645 FEYGSPKQRKEL---ANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVH-ELDGNV 700
+ + +QR ++ A GQ++ +SL YG RV+Q+ +E I +++ LV L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 701 MRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEV 760
+ ++D NGNHVIQ+C++ + TE FI A ++ H +GC V+Q+ + + S
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAY-SMRQ 509
Query: 761 QCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASN 820
Q + ++ EI +S LAQD +GNY Q V+E P + ++ +L GH V+LS KF+S+
Sbjct: 510 QREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 821 VVEKCLEYGDTTERQLLIAEIVG 843
+VE+CL + + Q ++ E+V
Sbjct: 570 MVERCLMHCPESRPQ-IVRELVS 591
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 9/242 (3%)
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVL-PHASKLMTDVFGNYVIQKFFEYG 648
G ++ S + +G+R +Q+ ET + + K L P L+ D+ GN+VIQ+ +
Sbjct: 411 GQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRCLQCL 470
Query: 649 SPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQN 708
S + K + + ++ +GC V+QK + +Q+ +L+ E+ N + +D
Sbjct: 471 STEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPF 530
Query: 709 GNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDE 768
GN+ +Q IE + +++ +G LSM + +++R L HC E + Q IV E
Sbjct: 531 GNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCP-ESRPQ-IVRE 588
Query: 769 ILESSC--SLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIV----ELSQHKFASNVV 822
++ L QD Y N+V Q L K + ++ + H + + F+ N++
Sbjct: 589 LVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPHSILRNNPYCKRIFSRNLL 648
Query: 823 EK 824
+K
Sbjct: 649 KK 650
>AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 |
chr5:22881721-22883842 FORWARD LENGTH=596
Length = 596
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 156/293 (53%), Gaps = 5/293 (1%)
Query: 556 GRRTFDSAYDPKIVNFLEDLKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVE 615
GR + + + L +L + +++ G I + D HG RF+Q+ F
Sbjct: 246 GRLWLQNQLNEDLTMSLNNLSLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGN 305
Query: 616 DKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLV---GQILPLSLQMY 672
D ++F E++ + S+LM D FGNY++QK E + QR ++ + + G ++ +S M+
Sbjct: 306 DIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMH 365
Query: 673 GCRVIQKALEVIDIEQKVQLV-HELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISA 731
G R +QK +E E+++ ++ L ++ +++ NGNHV+Q+C++ + F+ A
Sbjct: 366 GTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEA 425
Query: 732 FRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLE 791
L+ +GC V+Q+ L + E Q Q +V EI ++ L+QD +GNYV Q+V E
Sbjct: 426 AITHCVELATDRHGCCVLQKCLGYSEGE-QKQHLVSEIASNALLLSQDPFGNYVLQYVFE 484
Query: 792 RGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGH 844
+I+ +L G+ ELS K +SNVVEKCL+ D R +I E++ +
Sbjct: 485 LQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINY 537
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 582 RFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVI 641
+F I + VE + D HG +Q+ E K + E+ +A L D FGNYV+
Sbjct: 420 KFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVL 479
Query: 642 QKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELD--GN 699
Q FE E+ +L G LS+Q V++K L++ D + + +++ EL G
Sbjct: 480 QYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGR 539
Query: 700 VMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVI 749
+ + + D GN+VIQ ++ ++ A + + L +PYG +V+
Sbjct: 540 LDQVMLDPYGNYVIQAALKQSKGNVHALLVDAIKLNISSLRTNPYGKKVL 589
>AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 |
chr4:5631298-5633779 FORWARD LENGTH=556
Length = 556
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 144/262 (54%), Gaps = 8/262 (3%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
+ D G + + D G R +Q+ + D ++FKEV+ + +L TD FGNY+IQK
Sbjct: 239 MVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKL 298
Query: 645 FEYGSPKQRKELANRLV---GQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHE-LDGNV 700
E + +QR ++ RL G ++ +S+ YG RV+QK +E + ++++ LV L
Sbjct: 299 IEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGF 358
Query: 701 MRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEV 760
+ R+ NGNHVI C++ FI+ A ++ +GC V+QR + + E
Sbjct: 359 LSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGE- 417
Query: 761 QCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASN 820
Q + +VDEI +S LAQD +GNY+ Q+++E K ++ L G+ V+L+ KF S+
Sbjct: 418 QHEKLVDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKFGSH 475
Query: 821 VVEKCLEYGDTTERQLLIAEIV 842
VVEKCL Y + Q ++ E+V
Sbjct: 476 VVEKCLRYYPESRSQ-IVNELV 496
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 590 GYIVEFSADPHGSRFIQQKFETCGVEDK-ALVFKEVLPHASKLMTDVFGNYVIQKFFEYG 648
G +V+ S + +G+R +Q+ ET +++ +LV ++P L ++ GN+VI ++
Sbjct: 319 GLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVILNCLKFF 378
Query: 649 SPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQN 708
SP K + + ++ +GC V+Q+ + EQ +LV E+ N + +D
Sbjct: 379 SPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLLAQDPF 438
Query: 709 GNHVIQKCIESIPTEKIGFIISAF--RGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIV 766
GN+++Q IE +K+G + F RG L+ +G V+++ L + E + Q IV
Sbjct: 439 GNYLVQYIIE----KKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLRY-YPESRSQ-IV 492
Query: 767 DEILE--SSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRL 805
+E++ + L QD Y NYV Q L + K R+ ++ ++
Sbjct: 493 NELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKV 533
>AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 |
chr1:13227324-13229796 REVERSE LENGTH=564
Length = 564
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 136/247 (55%), Gaps = 7/247 (2%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
+ +I G + + D G R +Q+ E + ++ ++ H +L D FGNY++QK
Sbjct: 247 MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKL 306
Query: 645 FEYGSPKQRKELANRLVG---QILPLSLQMYGCRVIQKALEVIDIEQKVQLVHE-LDGNV 700
F+ +QR + + L +++ + L YG RV+QK +E + +Q++ LV L
Sbjct: 307 FDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGF 366
Query: 701 MRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEV 760
+ V+D NGNHVIQ C++++ F++ A +++H +GC V+Q + + S +
Sbjct: 367 LALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISN-SVGL 425
Query: 761 QCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASN 820
Q + +V EI +S L+QD +GNYV Q+++++ + + R+ H EL+ KF+S+
Sbjct: 426 QRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAVKLLVQFRM--HYAELATQKFSSH 483
Query: 821 VVEKCLE 827
V+EKCL
Sbjct: 484 VIEKCLR 490
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 647 YG--SPKQRKELAN--RLVGQILPLSLQMYGCRVIQKALEVIDI-EQKVQLVHELDGNVM 701
YG SPK +L + + G + ++ GCRV+QK +E E KV L+ +D +V+
Sbjct: 233 YGKMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIID-HVV 291
Query: 702 RCVRDQNGNHVIQKCIESIPTEKIGFIISAFRG---QVPILSMHPYGCRVIQRVLEHCSD 758
D GN+++QK + E+ I+S ++ + ++ YG RV+Q+++E
Sbjct: 292 ELSMDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKT 351
Query: 759 EVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFA 818
+ Q + + +L +D GN+V Q L+ P + ++ + + E++ H+
Sbjct: 352 KQQIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHG 411
Query: 819 SNVVEKCLEYGDTTERQLLIAEI 841
V++ C+ +R+ L+AEI
Sbjct: 412 CCVLQCCISNSVGLQRERLVAEI 434
>AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 |
chr1:13253398-13255570 REVERSE LENGTH=528
Length = 528
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 7/246 (2%)
Query: 585 LSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVFGNYVIQKF 644
+ +I G + + D G R +Q+ E V D ++F E++ H +L D GNY++QK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 645 FEYGSPKQRKELANRLVG---QILPLSLQMYGCRVIQKALEVIDIEQKVQLVHE-LDGNV 700
+QR + + L +++ + L G RVIQK ++ + +Q++ LV L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 701 MRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEV 760
+ V D NG HV+Q C+E + F++ A L+ H YGC V+Q L + + +
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLIN-TVGL 389
Query: 761 QCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASN 820
Q + +V EI S L+QD +GNYV Q +++ + ++ H +EL+ KF+S+
Sbjct: 390 QHERLVAEISRDSLRLSQDPFGNYVVQCLID--QQVSSVNLLLPFRTHCIELATQKFSSH 447
Query: 821 VVEKCL 826
V+EKCL
Sbjct: 448 VIEKCL 453
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 673 GCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAF 732
GCR +QK +E + + E+ +V+ D GN+++QK + E+ I+S
Sbjct: 227 GCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQRTMIVSVL 286
Query: 733 RG---QVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHV 789
++ + ++ G RVIQ++++ + Q + + L D G +V Q
Sbjct: 287 TSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFLVLVNDSNGYHVLQSC 346
Query: 790 LERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEI 841
LE P + ++ + + +L+ H++ V++ L + + L+AEI
Sbjct: 347 LEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEI 398
>AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 |
chr4:5450434-5453183 FORWARD LENGTH=477
Length = 477
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 117/248 (47%), Gaps = 19/248 (7%)
Query: 620 VFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLV---GQILPLSLQMYGCRV 676
+F ++ H +LM D +G+ V +K E + +Q + + ++ + + L + +G
Sbjct: 183 IFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHA 242
Query: 677 IQKALEVIDIEQKVQLVHELDGNV-MRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQ 735
IQ + + E+++ E V + +D + VI C +++
Sbjct: 243 IQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQN 302
Query: 736 VPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYG----------NYV 785
+++ GC ++++++ S E++ ++ EI+ + L + YG NYV
Sbjct: 303 CYQVAIDQNGCCMLKKLIRQSSRELR-DPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYV 361
Query: 786 TQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHD 845
Q++L + S + L G+ V+LS K+ S+VV+KCLE + + R+ +IAE++
Sbjct: 362 VQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLESREFSSRR-IIAELLS-- 418
Query: 846 EQSDNLLV 853
D+LLV
Sbjct: 419 -DIDSLLV 425
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 13/206 (6%)
Query: 593 VEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMT-DVFGNYVIQKFFEYGSPK 651
V HG+ IQ + E++ F E L + S L+T DV + VI F SP
Sbjct: 231 VRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPS 290
Query: 652 QRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQLVHELDGNVMRCVRDQNG-- 709
+ L +V +++ GC +++K + E + L+ E+ +R + G
Sbjct: 291 HTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTL 350
Query: 710 --------NHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQ 761
N+V+Q + E + G LS YG V+Q+ LE S E
Sbjct: 351 TPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE--SREFS 408
Query: 762 CQFIVDEILESSCSLAQDQYGNYVTQ 787
+ I+ E+L SL D YG+YV Q
Sbjct: 409 SRRIIAELLSDIDSLLVDPYGDYVIQ 434
>AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 |
chr5:17295933-17298171 FORWARD LENGTH=527
Length = 527
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 124/286 (43%), Gaps = 32/286 (11%)
Query: 575 LKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTD 634
+++G+G F ++ D S+ +++ E ++F ++ +LM D
Sbjct: 206 MENGRGSYFSIA----------TDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVD 255
Query: 635 VFGNYVIQKFFEYGSPKQR---KELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQ 691
FGN V++ S +Q ++ R + + + + G IQ L I Q
Sbjct: 256 PFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQ 315
Query: 692 LVHELDG---NVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRV 748
+ +D ++ R+ N +VI C F S R + ++S H Y +
Sbjct: 316 IPRIMDAISSVALQLTRNTNAKYVILACFRM-------FTSSQCRRLLEVVSQHCYQIAI 368
Query: 749 IQR---VLEHCSDEVQC------QFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERS 799
Q +L+ C D+ + Q ++ E++E + L + +GNYV Q+V+E E
Sbjct: 369 DQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETD 428
Query: 800 QIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEIVGHD 845
++ +L + L+++K+ S+VV+K L+ + +++ + G D
Sbjct: 429 LLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDLLRGID 474
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 575 LKSGKGRRFELSDIIGYIVEFSADPHGSRFIQQKFETCGV---EDKALVFKEVLPHASKL 631
S + RR L + + + + D +G +QQ F+ V E + + EV+ HA KL
Sbjct: 347 FTSSQCRRL-LEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKL 405
Query: 632 MTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKVQ 691
+ GNYV+Q E + + L N+L+ L+ YG V+QK L++ I+ K+
Sbjct: 406 CLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLI 465
Query: 692 LVHELDGNVMRCVRDQNGNHVIQ 714
+V L G + + D GN+VIQ
Sbjct: 466 VVDLLRG-IDTLLLDPFGNYVIQ 487
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 109/282 (38%), Gaps = 48/282 (17%)
Query: 588 IIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMTDVF----------- 636
I+G I E DP G+ ++ C E L+ V H SK + F
Sbjct: 246 IVG-ICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNPIGTLAIQVL 304
Query: 637 -------------------------------GNYVIQKFFEYGSPKQRKELANRLVGQIL 665
YVI F + Q + L +
Sbjct: 305 LTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQHCY 364
Query: 666 PLSLQMYGCRVIQKALE---VIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPT 722
+++ GC ++Q+ + V + E + +L+ E+ + ++ + +GN+V+Q +E
Sbjct: 365 QIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQ 424
Query: 723 EKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYG 782
+ +++ L+ + YG V+Q++L+ + + IV ++L +L D +G
Sbjct: 425 HETDLLVNKLLRNYAHLARNKYGSHVVQKLLK--LRGIDSKLIVVDLLRGIDTLLLDPFG 482
Query: 783 NYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEK 824
NYV Q K R + + +I + +KF + ++EK
Sbjct: 483 NYVIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNKILEK 524
>AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 |
chr5:23914141-23915139 REVERSE LENGTH=332
Length = 332
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 744 YGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIG 803
YGC + ++ D ++D + ++ L+ D YGN+V QHVL+ + I
Sbjct: 166 YGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIAD 225
Query: 804 RLSGHIVELSQHKFASNVVEKCLEYGDT 831
+L G+ VELS K+ S +VE+ LE GD
Sbjct: 226 KLCGYCVELSFKKYGSYIVERLLEAGDV 253
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 112/252 (44%), Gaps = 40/252 (15%)
Query: 567 KIVNFL---EDLKSG-----KGRRFELSDIIG----YIVEFSADPHGSRFIQQKFETCGV 614
+I NF+ EDLK G ++ ++ Y + + + +GS+ +Q+ G+
Sbjct: 50 RIFNFMTGSEDLKDDISVLDTGTLMWMASLMTSDCDYFMVITTNKNGSKTLQKLM---GM 106
Query: 615 EDK--ALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMY 672
D F+ ++ +MTD + +YV + +R+ + ++++ L+ Y
Sbjct: 107 SDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKRELMYDQILRYACFLAGDQY 166
Query: 673 GCRVIQKAL-EVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQ--------KCIESIPTE 723
GC + + + ++ D + QL+ + N + D GN V+Q +C +I +
Sbjct: 167 GCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADK 226
Query: 724 KIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEIL----ESSCSLAQD 779
G+ + LS YG +++R+LE + +V +V ++L E LA+
Sbjct: 227 LCGYCVE--------LSFKKYGSYIVERLLE--AGDVPMATVVLDLLACKTEMLIRLARS 276
Query: 780 QYGNYVTQHVLE 791
+YGN+V LE
Sbjct: 277 EYGNFVVCKALE 288
>AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 |
chr1:13330510-13331506 FORWARD LENGTH=304
Length = 304
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 744 YGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIG 803
YGC + +++ D ++D + ++ L+ D YGN+V QHVL+ + I
Sbjct: 138 YGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIAD 197
Query: 804 RLSGHIVELSQHKFASNVVEKCLEYGDT 831
+L G+ VELS K+ S +VE+ LE D
Sbjct: 198 KLCGYCVELSFKKYGSYIVERLLEVRDI 225
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 627 HASKLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDI 686
+A L D +GN+V+Q + + +A++L G + LS + YG ++++ LEV DI
Sbjct: 166 NALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDI 225
Query: 687 EQKVQLVHELDGN---VMRCVRDQNGNHVIQKCIE 718
++ L ++R R +NGN V+ K +E
Sbjct: 226 PMATIVLDLLACKTEMLIRLARSENGNFVVCKLLE 260
>AT3G16810.1 | Symbols: APUM24, PUM24 | pumilio 24 |
chr3:5723436-5727539 REVERSE LENGTH=641
Length = 641
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 725 IGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYGNY 784
I I +G+VP +++ RV+Q ++ CS + + + E+ +LA ++Y +
Sbjct: 112 ISEAIRKMKGKVPEIAVSHVSSRVLQTCVKFCS-QAEKDVLFTELQPQFLNLASNKYAVH 170
Query: 785 VTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIAEI 841
Q +L+ Q+ + I L GH+ L +H F S VVE G ++Q L+AE+
Sbjct: 171 FIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELLAEL 227
>AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 |
chr5:17309842-17311937 FORWARD LENGTH=518
Length = 518
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 109/282 (38%), Gaps = 48/282 (17%)
Query: 588 IIGYIVEFSADPHGSRFIQQKFETCGVEDKALVFKEVLPHASKLMT---DVFGNYVIQKF 644
+IG I E DP+GS +Q C E + V + + D G IQ
Sbjct: 237 LIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQMFQFVNICIDSLGTNAIQVL 296
Query: 645 FEYGSPKQRKELANRLVGQILPLSLQM--------------------------------- 671
+ + + ++ R+V + ++LQ+
Sbjct: 297 LTCINERAKDQIP-RIVDVVRTVALQLSKSNHAIFVILACFRLFPLHCRLLLELIVQNCH 355
Query: 672 ------YGCRVIQKAL---EVIDIEQKVQLVHELDGNVMRCVRDQNGNHVIQKCIESIPT 722
+GC ++Q V ++E + +L+ E N +R + GN+V+Q +E
Sbjct: 356 QIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNR 415
Query: 723 EKIGFIISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQYG 782
I ++ G L+ + YG +Q++L+ + + IV ++L +L D +G
Sbjct: 416 YLIDALVRQLIGNYAHLARNKYGSHAVQKLLK--LRWIDSRVIVIDLLREIDTLLLDPFG 473
Query: 783 NYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEK 824
NYV Q K R + + +I + +KF + V+EK
Sbjct: 474 NYVIQTAWFVSKDDVRRMLRYHIERNIPMMRCNKFGNKVLEK 515
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 582 RFELSDIIGYIVEFSADPHGSRFIQQKFETCGV---EDKALVFKEVLPHASKLMTDVFGN 638
R L I+ + + D HG +Q F V E + + E + +A +L + +GN
Sbjct: 344 RLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGN 403
Query: 639 YVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQKV---QLVHE 695
YV+Q E + L +L+G L+ YG +QK L++ I+ +V L+ E
Sbjct: 404 YVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLKLRWIDSRVIVIDLLRE 463
Query: 696 LDGNVMRCVRDQNGNHVIQKCIESIPTEKIGFIISAFRGQVPILSMHPYGCRVIQRV 752
+D ++ D GN+VIQ + + +P++ + +G +V++++
Sbjct: 464 IDTLLL----DPFGNYVIQTAWFVSKDDVRRMLRYHIERNIPMMRCNKFGNKVLEKL 516
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 48/252 (19%)
Query: 630 KLMTDVFGNYVIQKFFEYGSPKQRKELANRLVGQILPLSLQMYGCRVIQKALEVIDIEQK 689
K M++ G + Q G+ + + N L+G I L + YG V+Q + EQ
Sbjct: 212 KEMSERLGMSIFQ-----GTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQI 266
Query: 690 VQLVHELDGNVMRCVR---DQNGNHVIQ---KCIESIPTEKIGFIISAFRGQVPILS--- 740
VQLV + + + V D G + IQ CI ++I I+ R LS
Sbjct: 267 VQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSN 326
Query: 741 -----------MHPYGCRVI-QRVLEHCS----DEVQC------------------QFIV 766
+ P CR++ + ++++C D+ C Q ++
Sbjct: 327 HAIFVILACFRLFPLHCRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLI 386
Query: 767 DEILESSCSLAQDQYGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCL 826
E + ++ L + YGNYV Q+++E ++ +L G+ L+++K+ S+ V+K L
Sbjct: 387 MEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLL 446
Query: 827 EYGDTTERQLLI 838
+ R ++I
Sbjct: 447 KLRWIDSRVIVI 458
>AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 |
chr1:7579129-7580171 FORWARD LENGTH=308
Length = 308
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 684 IDIEQKVQLVHELDGNVMRCV---------------RDQNGNHVIQKCIESIPTEKIGFI 728
+ I VQ++ +LD ++ + R+ NG+ IQK + F
Sbjct: 63 LQIAMDVQMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALFA 122
Query: 729 ISAFRGQVPILSMHPYGCRVIQRVLEHCSDEVQCQFIVDEILESSCSLAQDQ-------- 780
+ R + I++ Y V++R + D+ + + + + IL + +A+D+
Sbjct: 123 AAILRRFLHIIT-DKYASYVVRRGMT-VFDKKKKKAMYEHILHYASHIARDKHALVLSND 180
Query: 781 -YGNYVTQHVLERGKPQERSQIIGRLSGHIVELSQHKFASNVVEKCLEYGDTTERQLLIA 839
YGN+V Q VL+ + ++ I+ L GH V+LS K+ S VV+ LE T E +++
Sbjct: 181 AYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLE---TKESMVVVV 237
Query: 840 E 840
E
Sbjct: 238 E 238