Miyakogusa Predicted Gene
- Lj4g3v2122820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2122820.1 Non Chatacterized Hit- tr|I1MH11|I1MH11_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,67.41,0,PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; PUMILIO 1,
2,NULL; RNA BINDING PR,CUFF.50294.1
(2559 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70599 weakly similar to UniRef100_A7Q4A4 Cluster: Chr... 835 0.0
gnl|LJGI|AV410304 767 0.0
gnl|LJGI|AU252193 similar to UniRef100_A7QQT8 Cluster: Chromosom... 268 2e-70
gnl|LJGI|TC80709 weakly similar to UniRef100_A7Q4A4 Cluster: Chr... 105 1e-21
gnl|LJGI|FS320563 weakly similar to UniRef100_A7Q4A4 Cluster: Ch... 94 5e-18
gnl|LJGI|TC69724 similar to UniRef100_A7QQT8 Cluster: Chromosome... 66 1e-09
>gnl|LJGI|TC70599 weakly similar to UniRef100_A7Q4A4 Cluster: Chromosome chr9
scaffold_49, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_49, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 593
Score = 835 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Plus
Query: 1 atggcgactgagagtccgattagaatctcggaagccggggggaaatggccaactcttaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggcgactgagagtccgattagaatctcggaagccggggggaaatggccaactcttaag 232
Query: 61 gaagctgcgactttcggttcaccgtctcgtaacgtggcgacggaggatttggctgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaagctgcgactttcggttcaccgtctcgtaacgtggcgacggaggatttggctgttctt 292
Query: 121 ttgaagagccataggttttgtggcaatggaagggatgcggtgcccaatcgcagcggtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttgaagagccataggttttgtggcaatggaagggatgcggtgcccaatcgcagcggtagt 352
Query: 181 gcacctccgagcatggaagggtcatttatggcctcgaataacctcttatcccagaacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gcacctccgagcatggaagggtcatttatggcctcgaataacctcttatcccagaacaag 412
Query: 241 gcccagaatgtggacttgctaactctgaacagagctatgaaaaaatatgatactggtaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gcccagaatgtggacttgctaactctgaacagagctatgaaaaaatatgatactggtaaa 472
Query: 301 gattcttttcatttgtcacaaggaactcttgcaacacccaaggaggagtctgaggatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gattcttttcatttgtcacaaggaactcttgcaacacccaaggaggagtctgaggatgat 532
Query: 361 tcaccccaacagccgtatgatgatgagttggataaggctagtggaatatggcatagacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tcaccccaacagccgtatgatgatgagttggataaggctagtggaatatggcatagacag 592
Query: 421 g 421
|
Sbjct: 593 g 593
>gnl|LJGI|AV410304
Length = 387
Score = 767 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Plus
Query: 1185 tgggggaaacatttcacatggagctgaaatgttacctgcaagcaagttactaggacaata 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggggaaacatttcacatggagctgaaatgttacctgcaagcaagttactaggacaata 60
Query: 1245 tggatttcctctgcagccttcttttggtgattctatgtacatgcaatatcaccagcaacc 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggatttcctctgcagccttcttttggtgattctatgtacatgcaatatcaccagcaacc 120
Query: 1305 ttttgcggagggatatggtgtttctggtcatctgttaacacctagaccgagtgttggtag 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttgcggagggatatggtgtttctggtcatctgttaacacctagaccgagtgttggtag 180
Query: 1365 ccaaagtgacccttttgattctcaaaagtggcccaatagtggtgcttatttggatgacaa 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaagtgacccttttgattctcaaaagtggcccaatagtggtgcttatttggatgacaa 240
Query: 1425 aaaagtgcattatcagggaaatggtgcgcatttgaactctagcagaggtgggctaatgat 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagtgcattatcagggaaatggtgcgcatttgaactctagcagaggtgggctaatgat 300
Query: 1485 tcccagttattttggacacccgccaaatatgagattcgtaatgcagaatccaagttcccc 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccagttattttggacacccgccaaatatgagattcgtaatgcagaatccaagttcccc 360
Query: 1545 actttctagtccagttttaccggcata 1571
|||||||||||||||||||||||||||
Sbjct: 361 actttctagtccagttttaccggcata 387
>gnl|LJGI|AU252193 similar to UniRef100_A7QQT8 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(13%)
Length = 350
Score = 268 bits (135), Expect = 2e-70
Identities = 253/293 (86%)
Strand = Plus / Plus
Query: 1489 agttattttggacacccgccaaatatgagattcgtaatgcagaatccaagttccccactt 1548
||||||||||| || |||||| ||| | || ||||||||| |||||| ||||||||||
Sbjct: 58 agttattttgggcatatgccaaacatgggttttgtaatgcagtatccaaattccccactt 117
Query: 1549 tctagtccagttttaccggcataccaggaaagcaatcctggccttccaggaggaaggaat 1608
||||||||| ||| ||| ||| | ||| | | || ||||||||||||||| || |||
Sbjct: 118 cctagtccagctttctcgggatatccagaaggaactcttggccttccaggaggtagaaat 177
Query: 1609 gaaatgaaagtttccccagtttctggtagacatggaggtatattatctggatggcaaggt 1668
||||||||| ||||||||| |||||||| | ||||||| |||||||||||||||||||||
Sbjct: 178 gaaatgaaactttccccagcttctggtanaaatggaggcatattatctggatggcaaggt 237
Query: 1669 cgaagaacctttgacagtgcttatgaccccaaaattgttaattttcttgaagatttaaaa 1728
| || |||||||||||||| ||||||||||||||||||||||||||||| | ||||||
Sbjct: 238 cagaggtcctttgacagtgctcatgaccccaaaattgttaattttcttgaanagttaaaa 297
Query: 1729 tctggcaaaggtcgcagatttgagctatctgatattattggttatattgttga 1781
|||||||||||||| | |||||||||||||||||||||||| ||||||||||
Sbjct: 298 tctggcaaaggtcgtacatttgagctatctgatattattggacatattgttga 350
>gnl|LJGI|TC80709 weakly similar to UniRef100_A7Q4A4 Cluster: Chromosome chr9
scaffold_49, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_49, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 634
Score = 105 bits (53), Expect = 1e-21
Identities = 173/213 (81%)
Strand = Plus / Plus
Query: 1 atggcgactgagagtccgattagaatctcggaagccggggggaaatggccaactcttaag 60
||||| ||||| ||||| ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 187 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 246
Query: 61 gaagctgcgactttcggttcaccgtctcgtaacgtggcgacggaggatttggctgttctt 120
|||||||| ||||| ||| ||| |||| |||| ||| ||| |||||||||| | | |||
Sbjct: 247 gaagctgcaacttttggtcaaccatctcataacatggtgactgaggatttgggtatactt 306
Query: 121 ttgaagagccataggttttgtggcaatggaagggatgcggtgcccaatcgcagcggtagt 180
|||||| |||||||||| ||||| ||| |||| | ||||||||||| || |||
Sbjct: 307 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 366
Query: 181 gcacctccgagcatggaagggtcatttatggcc 213
|||||||| ||||||||||| |||||| |||||
Sbjct: 367 gcacctcccagcatggaaggttcatttctggcc 399
>gnl|LJGI|FS320563 weakly similar to UniRef100_A7Q4A4 Cluster: Chromosome chr9
scaffold_49, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_49, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 358
Score = 93.7 bits (47), Expect = 5e-18
Identities = 167/207 (80%)
Strand = Plus / Plus
Query: 1 atggcgactgagagtccgattagaatctcggaagccggggggaaatggccaactcttaag 60
||||| ||||| ||||| ||||||||||| ||||| ||||| || ||||| ||| ||||
Sbjct: 151 atggcaactgaaagtccaattagaatctcagaagctgggggtaagtggccgtctcataag 210
Query: 61 gaagctgcgactttcggttcaccgtctcgtaacgtggcgacggaggatttggctgttctt 120
|||||||| ||||| ||| ||| |||| |||| || ||| |||||||||| | | |||
Sbjct: 211 gaagctgcaacttttggtcaaccatctcataacatgaggactgaggatttgggtatactt 270
Query: 121 ttgaagagccataggttttgtggcaatggaagggatgcggtgcccaatcgcagcggtagt 180
|||||| |||||||||| ||||| ||| |||| | ||||||||||| || |||
Sbjct: 271 ttgaagggccataggttccatggcaggggacacgatgttgcacccaatcgcagtggcagt 330
Query: 181 gcacctccgagcatggaagggtcattt 207
|||||||| ||||||||||| ||||||
Sbjct: 331 gcacctcccagcatggaaggttcattt 357
>gnl|LJGI|TC69724 similar to UniRef100_A7QQT8 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 773
Score = 65.9 bits (33), Expect = 1e-09
Identities = 99/121 (81%)
Strand = Plus / Plus
Query: 2436 gagccagcataagtttgcatcaaatgttgttgagaaatgtttagagtatggagataccac 2495
|||||||||||||||||| || |||||||| ||||| || || | |||||| ||| | |
Sbjct: 1 gagccagcataagtttgcttcgaatgttgtcgagaagtgcttggtgtatggtgatgtccc 60
Query: 2496 tgagcggcagttgttgattgcagagattgttgggcatgatgaacaaagtgataatctatt 2555
|||||| | | |||||||||||||||| |||| || ||||| |||| | ||||| ||||
Sbjct: 61 agagcgggaatcgttgattgcagagattattggacaggatgagcaaaataataatttatt 120
Query: 2556 g 2556
|
Sbjct: 121 g 121