Miyakogusa Predicted Gene

Lj4g3v2023910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2023910.1 tr|Q6K9C2|Q6K9C2_ORYSJ Os02g0610700 protein
OS=Oryza sativa subsp. japonica GN=OJ1476_F05.21-1 PE=4 ,51.28,2e-19,
,CUFF.50168.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g07560.1                                                       197   3e-51
Glyma03g14800.1                                                        98   2e-21
Glyma13g01430.1                                                        67   5e-12

>Glyma17g07560.1 
          Length = 138

 Score =  197 bits (501), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 98/145 (67%), Positives = 116/145 (80%), Gaps = 10/145 (6%)

Query: 3   SNILPLTNTHLVPFPVQHRSL--TVVKWGWKREQDVSIVSNTPRSQSFRVLATASNTKVV 60
           + ILP +N   V F  +HRS   T+ +WGW++EQD SIV+N  R Q+F+VL        V
Sbjct: 2   ATILPPSNAQFVSFNARHRSSSPTLPRWGWRKEQDASIVANRTRGQAFQVL--------V 53

Query: 61  SSGKAGSKNDVIMVDPVEAKQLAAKQMERIKAKEKLKRRRQIEAINGAWAMIGLTAGLVI 120
           +SGK GSK+DV+MVDPVEAK+LAAKQME+IKAKEKLKRRRQIEAINGAWAMIGLTAGLVI
Sbjct: 54  ASGKEGSKDDVVMVDPVEAKRLAAKQMEKIKAKEKLKRRRQIEAINGAWAMIGLTAGLVI 113

Query: 121 EGQTGKNIMTQLQDYFDAIIHFFVR 145
           EGQTGK+I+TQLQDY   I+ FFVR
Sbjct: 114 EGQTGKSILTQLQDYLGTIVSFFVR 138


>Glyma03g14800.1 
          Length = 81

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 3/73 (4%)

Query: 73  MVDPVEAKQLAAKQMERIKAKEKLKRRRQIEAINGAWAMIGLTAGLVIEGQTGKNIMTQL 132
           MVD V+AK+L  K+MERIKAKEK KRR QIEAIN AW MIGLT GLVIEGQTGK+I+TQ 
Sbjct: 1   MVDLVKAKRLVVKKMERIKAKEKFKRRHQIEAINEAWEMIGLTVGLVIEGQTGKSILTQ- 59

Query: 133 QDYFDAIIHFFVR 145
             +   + +FFVR
Sbjct: 60  --FVSNMNNFFVR 70


>Glyma13g01430.1 
          Length = 68

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 36/40 (90%)

Query: 58 KVVSSGKAGSKNDVIMVDPVEAKQLAAKQMERIKAKEKLK 97
          KV SSGK GSK+DV+MVDPVEAK+LAA QMERIKAKEK K
Sbjct: 3  KVASSGKEGSKDDVVMVDPVEAKRLAAIQMERIKAKEKFK 42