Miyakogusa Predicted Gene

Lj4g3v2001930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2001930.1 Non Chatacterized Hit- tr|I1KI66|I1KI66_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40896 PE,74.77,0,Sm-like
ribonucleoproteins,Like-Sm (LSM) domain; Mechanosensitive channel
protein MscS (YggB), trans,CUFF.50078.1
         (523 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07350.1                                                       773   0.0  
Glyma16g03730.1                                                       715   0.0  
Glyma07g07350.2                                                       697   0.0  
Glyma04g10060.2                                                        68   3e-11
Glyma04g10060.1                                                        68   3e-11
Glyma06g10050.1                                                        67   4e-11
Glyma06g10060.1                                                        67   7e-11
Glyma09g33170.1                                                        65   2e-10
Glyma01g02840.1                                                        60   5e-09

>Glyma07g07350.1 
          Length = 539

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/543 (73%), Positives = 442/543 (81%), Gaps = 26/543 (4%)

Query: 1   MASVRFSHLRHLHSSINGSLNTKLVPQYQNHHNVAMNLARLPCDLLSRPYSKGESQSPRV 60
           MA+VR S +R L S+I GS N +LV     HH++ MNLARLP D LS PY K E Q    
Sbjct: 1   MAAVRSSSVRRLGSTIQGSFNMELVQHCHYHHSMCMNLARLPSDSLSHPYYKRELQ---- 56

Query: 61  FAQNQFTN-----------------ASFYPRSSSFCLQGTIPFASMTHMLXXXXXXXXXX 103
           FA+N+F+N                  S  P  S +C +  +PFASM+H+L          
Sbjct: 57  FAKNRFSNLASESLGSSHHFGTRASVSVKPTFSGYCFRSALPFASMSHVLNHRMYSSSVG 116

Query: 104 XXXXXXXXDTQVSAGSGVSDMNAGG----GGDWAERVKDTWKSVVETASYAGQKVKEASD 159
                    T+VSAGSG +D+N  G    GGDWAER+KD WKSV E ASYAG KVKE SD
Sbjct: 117 DKGSRDG-GTEVSAGSGATDINTTGDSVVGGDWAERIKDAWKSVAEAASYAGGKVKETSD 175

Query: 160 DLTPHAQQLLDSHPYLNAVVIPVGGTLTATLVAWFLMPTILRKFHKYAMQGPVALIPGSL 219
           DLTP AQQLLDSHPYL+ VVIPV GTLTAT++AWFL+P ILRKFHKYA QGPV+L+P S+
Sbjct: 176 DLTPFAQQLLDSHPYLDKVVIPVAGTLTATILAWFLLPRILRKFHKYATQGPVSLLPASV 235

Query: 220 FGEPVPYEKSFWGALEDPVRYLVTFMAFSQIGVMVAPTTIASQYLAPAWRGAVILSFVWF 279
             EPVPYEKSFWGA+EDPVRYLVTF+AFSQIGVMVAPTTI SQYLAP WRGAVI+SFVWF
Sbjct: 236 SVEPVPYEKSFWGAMEDPVRYLVTFIAFSQIGVMVAPTTITSQYLAPLWRGAVIVSFVWF 295

Query: 280 LHRWKTNVFARTLSGQNSLGLDREKLLALDKISSVGLFVIGIMALAEACGVAVQSIVTVG 339
           LHRWKTN+FARTLS Q+ LGLD+EK+LALDKISS+GLFVIGIMALAEACGVAVQS+VTVG
Sbjct: 296 LHRWKTNIFARTLSSQSLLGLDKEKVLALDKISSIGLFVIGIMALAEACGVAVQSVVTVG 355

Query: 340 GIGGVASAFAARDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSAEK 399
           GIGGVA+AFAA+DILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLT+TSLLS+EK
Sbjct: 356 GIGGVATAFAAKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTSTSLLSSEK 415

Query: 400 FPVIVPNSLFSSQVIVNKSRAEYRAIITKIPLQIEDLSKIPQISGDVKNMLTSNARVFLG 459
           FPVIVPNS FSSQVIVNKSRAEY AIITKIPLQ EDLSKIP IS DVK+ML SNA+VFLG
Sbjct: 416 FPVIVPNSFFSSQVIVNKSRAEYLAIITKIPLQTEDLSKIPPISDDVKSMLRSNAKVFLG 475

Query: 460 RDVPYCFLSRVESSYAELTLGYNLKHMRKDELYSAEQDILLQAVQIIKNHGIALGSTGQG 519
           +DVPYCFLSR+ESSYAELTLGYNLKHMRKDELYSAEQDILLQAVQIIKNHG+ALGST Q 
Sbjct: 476 KDVPYCFLSRIESSYAELTLGYNLKHMRKDELYSAEQDILLQAVQIIKNHGVALGSTWQD 535

Query: 520 MST 522
            S+
Sbjct: 536 TSS 538


>Glyma16g03730.1 
          Length = 404

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/403 (86%), Positives = 375/403 (93%), Gaps = 4/403 (0%)

Query: 124 MNAGG----GGDWAERVKDTWKSVVETASYAGQKVKEASDDLTPHAQQLLDSHPYLNAVV 179
           MN GG    GGDWAER+KD WKSV E ASYAG KVKE SDDLTP+AQQLLDSHPYL+ VV
Sbjct: 1   MNTGGDSVVGGDWAERIKDAWKSVAEAASYAGDKVKETSDDLTPYAQQLLDSHPYLDKVV 60

Query: 180 IPVGGTLTATLVAWFLMPTILRKFHKYAMQGPVALIPGSLFGEPVPYEKSFWGALEDPVR 239
           IPVGGTLTAT++AWFL+P ILRKFHKYAMQGPV+L+P S+ GEPVPYEKSFWGA+EDPVR
Sbjct: 61  IPVGGTLTATIIAWFLLPRILRKFHKYAMQGPVSLLPASVAGEPVPYEKSFWGAMEDPVR 120

Query: 240 YLVTFMAFSQIGVMVAPTTIASQYLAPAWRGAVILSFVWFLHRWKTNVFARTLSGQNSLG 299
           YLVTF+AFSQIGVMVAPTTI SQYLAP WRGAVI+SFVWFLHRWKTNVFAR+LS Q+ LG
Sbjct: 121 YLVTFIAFSQIGVMVAPTTITSQYLAPVWRGAVIVSFVWFLHRWKTNVFARSLSSQSLLG 180

Query: 300 LDREKLLALDKISSVGLFVIGIMALAEACGVAVQSIVTVGGIGGVASAFAARDILGNVFS 359
           LDREK+ ALDKISS+GLFVIGIMALAEACGVAVQSIVTVGGIGGVA+AFA +DILGNVFS
Sbjct: 181 LDREKVFALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFATKDILGNVFS 240

Query: 360 GLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSAEKFPVIVPNSLFSSQVIVNKSR 419
           GLSMQFSKPFSIGDTIKAGSIEGQVVEMGLT+TSLLS+EKFPVIVPNS FSSQVIVNKSR
Sbjct: 241 GLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTSTSLLSSEKFPVIVPNSFFSSQVIVNKSR 300

Query: 420 AEYRAIITKIPLQIEDLSKIPQISGDVKNMLTSNARVFLGRDVPYCFLSRVESSYAELTL 479
           AEYRAIITKIPLQ EDLSKIPQIS DVK+ML SNA VFLG+DVPYCFLSR+ESSYAELTL
Sbjct: 301 AEYRAIITKIPLQTEDLSKIPQISDDVKSMLRSNANVFLGKDVPYCFLSRIESSYAELTL 360

Query: 480 GYNLKHMRKDELYSAEQDILLQAVQIIKNHGIALGSTGQGMST 522
           GYNLKHMRKDELYSAEQDILLQAVQIIKNHG+ALGST Q  S+
Sbjct: 361 GYNLKHMRKDELYSAEQDILLQAVQIIKNHGVALGSTWQDTSS 403


>Glyma07g07350.2 
          Length = 477

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/490 (73%), Positives = 400/490 (81%), Gaps = 26/490 (5%)

Query: 1   MASVRFSHLRHLHSSINGSLNTKLVPQYQNHHNVAMNLARLPCDLLSRPYSKGESQSPRV 60
           MA+VR S +R L S+I GS N +LV     HH++ MNLARLP D LS PY K E Q    
Sbjct: 1   MAAVRSSSVRRLGSTIQGSFNMELVQHCHYHHSMCMNLARLPSDSLSHPYYKRELQ---- 56

Query: 61  FAQNQFTNASFYPRSSSFCLQGTIPFASMTHMLXXXXXXXXXXXXXXXXXXDTQVSAGSG 120
           FA+N+                  +PFASM+H+L                   T+VSAGSG
Sbjct: 57  FAKNR-----------------ALPFASMSHVLNHRMYSSSVGDKGSRDG-GTEVSAGSG 98

Query: 121 VSDMNAGG----GGDWAERVKDTWKSVVETASYAGQKVKEASDDLTPHAQQLLDSHPYLN 176
            +D+N  G    GGDWAER+KD WKSV E ASYAG KVKE SDDLTP AQQLLDSHPYL+
Sbjct: 99  ATDINTTGDSVVGGDWAERIKDAWKSVAEAASYAGGKVKETSDDLTPFAQQLLDSHPYLD 158

Query: 177 AVVIPVGGTLTATLVAWFLMPTILRKFHKYAMQGPVALIPGSLFGEPVPYEKSFWGALED 236
            VVIPV GTLTAT++AWFL+P ILRKFHKYA QGPV+L+P S+  EPVPYEKSFWGA+ED
Sbjct: 159 KVVIPVAGTLTATILAWFLLPRILRKFHKYATQGPVSLLPASVSVEPVPYEKSFWGAMED 218

Query: 237 PVRYLVTFMAFSQIGVMVAPTTIASQYLAPAWRGAVILSFVWFLHRWKTNVFARTLSGQN 296
           PVRYLVTF+AFSQIGVMVAPTTI SQYLAP WRGAVI+SFVWFLHRWKTN+FARTLS Q+
Sbjct: 219 PVRYLVTFIAFSQIGVMVAPTTITSQYLAPLWRGAVIVSFVWFLHRWKTNIFARTLSSQS 278

Query: 297 SLGLDREKLLALDKISSVGLFVIGIMALAEACGVAVQSIVTVGGIGGVASAFAARDILGN 356
            LGLD+EK+LALDKISS+GLFVIGIMALAEACGVAVQS+VTVGGIGGVA+AFAA+DILGN
Sbjct: 279 LLGLDKEKVLALDKISSIGLFVIGIMALAEACGVAVQSVVTVGGIGGVATAFAAKDILGN 338

Query: 357 VFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSAEKFPVIVPNSLFSSQVIVN 416
           VFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLT+TSLLS+EKFPVIVPNS FSSQVIVN
Sbjct: 339 VFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTSTSLLSSEKFPVIVPNSFFSSQVIVN 398

Query: 417 KSRAEYRAIITKIPLQIEDLSKIPQISGDVKNMLTSNARVFLGRDVPYCFLSRVESSYAE 476
           KSRAEY AIITKIPLQ EDLSKIP IS DVK+ML SNA+VFLG+DVPYCFLSR+ESSYAE
Sbjct: 399 KSRAEYLAIITKIPLQTEDLSKIPPISDDVKSMLRSNAKVFLGKDVPYCFLSRIESSYAE 458

Query: 477 LTLGYNLKHM 486
           LTLGYNLKHM
Sbjct: 459 LTLGYNLKHM 468


>Glyma04g10060.2 
          Length = 681

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 7/252 (2%)

Query: 271 AVILSFVWFLHRWKTNVFARTLSGQNSLGLDREKLLALDKISSVGLFVIGIMALAEACGV 330
           + ++SF + L           L G +S G     L    K     ++V  +    E  G 
Sbjct: 200 STVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGF 259

Query: 331 AVQSIVTVGGIGGVASAFAARDILGNVFSGLSMQFSKPFSIGD----TIKAGSIEGQVVE 386
           + Q  VT GG+G V    A R+I  N  S + +  ++PF + +     I+   + G V  
Sbjct: 260 STQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEH 319

Query: 387 MGLTTTSLLSA-EKFPVIVPNSLFSSQVIVNKSRAEYRAIITKIPLQIEDLSKIPQISGD 445
           +G  + +++   ++  V +PN  F+  V+ N S+  +  I + I +   D++KI  I  D
Sbjct: 320 VGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKINNIVAD 379

Query: 446 VKNMLTSNARVFLGRDVPYCFLSRV--ESSYAELTLGYNLKHMRKDELYSAEQDILLQAV 503
           ++ +L+ N +V   +     FL  V  E+    + +   +K    +E    ++ ILL  +
Sbjct: 380 MRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLL 439

Query: 504 QIIKNHGIALGS 515
           +++ +H   L +
Sbjct: 440 RVVSHHRARLAT 451


>Glyma04g10060.1 
          Length = 681

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 7/252 (2%)

Query: 271 AVILSFVWFLHRWKTNVFARTLSGQNSLGLDREKLLALDKISSVGLFVIGIMALAEACGV 330
           + ++SF + L           L G +S G     L    K     ++V  +    E  G 
Sbjct: 200 STVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGF 259

Query: 331 AVQSIVTVGGIGGVASAFAARDILGNVFSGLSMQFSKPFSIGD----TIKAGSIEGQVVE 386
           + Q  VT GG+G V    A R+I  N  S + +  ++PF + +     I+   + G V  
Sbjct: 260 STQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEH 319

Query: 387 MGLTTTSLLSA-EKFPVIVPNSLFSSQVIVNKSRAEYRAIITKIPLQIEDLSKIPQISGD 445
           +G  + +++   ++  V +PN  F+  V+ N S+  +  I + I +   D++KI  I  D
Sbjct: 320 VGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKINNIVAD 379

Query: 446 VKNMLTSNARVFLGRDVPYCFLSRV--ESSYAELTLGYNLKHMRKDELYSAEQDILLQAV 503
           ++ +L+ N +V   +     FL  V  E+    + +   +K    +E    ++ ILL  +
Sbjct: 380 MRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLL 439

Query: 504 QIIKNHGIALGS 515
           +++ +H   L +
Sbjct: 440 RVVSHHRARLAT 451


>Glyma06g10050.1 
          Length = 660

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 7/216 (3%)

Query: 315 GLFVIGIMALAEACGVAVQSIVTVGGIGGVASAFAARDILGNVFSGLSMQFSKPFSIGD- 373
            ++V  +    E  G + Q  +T GG+G V  + A R+I  N  S + +  ++PF + + 
Sbjct: 250 AIWVAAVSLFMELLGFSTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNER 309

Query: 374 ---TIKAGSIEGQVVEMGLTTTSLLSAEKFPVI-VPNSLFSSQVIVNKSRAEYRAIITKI 429
               IK   + G+V  +G  + +++       + +PN   S  V+ N S+  +  I T +
Sbjct: 310 IQTKIKGYEVTGKVEHVGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHL 369

Query: 430 PLQIEDLSKIPQISGDVKNMLTSNARVFLGRDVPYCFLSRVESSYAELTLGYN--LKHMR 487
            +   D++KI  I  D++ +L  N +V   +     FL  ++     L +  +  +K   
Sbjct: 370 AISHLDVNKINSIIADMRKVLAKNPQVEQKKLHRRVFLENIDPENQALMILVSCFVKTRH 429

Query: 488 KDELYSAEQDILLQAVQIIKNHGIALGSTGQGMSTM 523
            +E    ++ ILL  +++I +H   L +  + +  M
Sbjct: 430 SEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKM 465


>Glyma06g10060.1 
          Length = 681

 Score = 66.6 bits (161), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 7/252 (2%)

Query: 271 AVILSFVWFLHRWKTNVFARTLSGQNSLGLDREKLLALDKISSVGLFVIGIMALAEACGV 330
           + ++SF + L           L G +S G     L    K     ++V  +    E  G 
Sbjct: 200 STVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGF 259

Query: 331 AVQSIVTVGGIGGVASAFAARDILGNVFSGLSMQFSKPFSIGD----TIKAGSIEGQVVE 386
           + Q  VT GG+G V    A R+I  N  S + +  ++PF + +     I+   + G V  
Sbjct: 260 STQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEH 319

Query: 387 MGLTTTSLLSA-EKFPVIVPNSLFSSQVIVNKSRAEYRAIITKIPLQIEDLSKIPQISGD 445
           +G  + +++   ++  V +PN  F+  V+ N S+  +  I + I +   D++K+  I  D
Sbjct: 320 VGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKVNNIVAD 379

Query: 446 VKNMLTSNARVFLGRDVPYCFLSRV--ESSYAELTLGYNLKHMRKDELYSAEQDILLQAV 503
           ++ +L+ N +V   +     FL  V  E+    + +   +K    +E    ++ ILL  +
Sbjct: 380 MRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLL 439

Query: 504 QIIKNHGIALGS 515
           +++ +H   L +
Sbjct: 440 RVVSHHRARLAT 451


>Glyma09g33170.1 
          Length = 719

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 7/197 (3%)

Query: 326 EACGVAVQSIVTVGGIGGVASAFAARDILGNVFSGLSMQFSKPFSIGD----TIKAGSIE 381
           E  G + Q  VT GG+G V    A R+I  N  S + +  ++PF + +     I+   + 
Sbjct: 254 ELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVS 313

Query: 382 GQVVEMGLTTTSLLSAE-KFPVIVPNSLFSSQVIVNKSRAEYRAIITKIPLQIEDLSKIP 440
           G V  +G  + +++  E +  V +PN  F+  V+ N S+  +  I T + +   D++KI 
Sbjct: 314 GTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKIN 373

Query: 441 QISGDVKNMLTSNARVFLGRDVPYCFLSRVESSYAELTLGYN--LKHMRKDELYSAEQDI 498
            I  D++ +L  N +V   R     FL  +      L +  +  +K    +E    ++ +
Sbjct: 374 NIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAV 433

Query: 499 LLQAVQIIKNHGIALGS 515
           LL  +++I +H   L +
Sbjct: 434 LLDLLRVIGHHRARLAT 450


>Glyma01g02840.1 
          Length = 658

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 5/150 (3%)

Query: 326 EACGVAVQSIVTVGGIGGVASAFAARDILGNVFSGLSMQFSKPFSIGD----TIKAGSIE 381
           E  G + Q  VT GG+G V    A R+I  N  S + +  ++PF + +     I+   + 
Sbjct: 214 ELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVS 273

Query: 382 GQVVEMGLTTTSLLSAE-KFPVIVPNSLFSSQVIVNKSRAEYRAIITKIPLQIEDLSKIP 440
           G V  +G  + +++  E +  V +PN  F+  V+ N S+  +  I T + +   D++KI 
Sbjct: 274 GTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKIN 333

Query: 441 QISGDVKNMLTSNARVFLGRDVPYCFLSRV 470
            I  D++ +L  N +V   R     FL  +
Sbjct: 334 NIVADMRKVLAKNPQVEQQRLHRRVFLDNI 363