Miyakogusa Predicted Gene
- Lj4g3v1983640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1983640.1 Non Chatacterized Hit- tr|B4FKH4|B4FKH4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,58,7e-18,YbaB_DNA_bd,YbaB-like DNA-binding protein; no
description,YbaB-like DNA-binding protein; YbaB-like,Y,CUFF.50070.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79164 similar to UniRef100_O82230 Cluster: Expressed ... 1142 0.0
gnl|LJGI|TC77875 similar to UniRef100_O82230 Cluster: Expressed ... 864 0.0
gnl|LJGI|TC63255 similar to UniRef100_O82230 Cluster: Expressed ... 321 3e-87
gnl|LJGI|TC81400 similar to UniRef100_A7PV25 Cluster: Chromosome... 84 1e-15
>gnl|LJGI|TC79164 similar to UniRef100_O82230 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (65%)
Length = 1070
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atggcgtccactgtttctctcactggtcaattatcaaacatccacggagcaagtgaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggcgtccactgtttctctcactggtcaattatcaaacatccacggagcaagtgaaagg 176
Query: 61 aaaaagcttagccttttatcaacttctctctgtaaactaaactccagtgcgaatgtagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aaaaagcttagccttttatcaacttctctctgtaaactaaactccagtgcgaatgtagtt 236
Query: 121 gacatgaggcctttatcccagcgtggacataaaaaagtagggcgtgatcgatgtttccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gacatgaggcctttatcccagcgtggacataaaaaagtagggcgtgatcgatgtttccga 296
Query: 181 gtttatgccctttttggaggaaaaaaggaaaataatgacggtgattctaagacaggaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtttatgccctttttggaggaaaaaaggaaaataatgacggtgattctaagacaggaatg 356
Query: 241 cttggaaacatgcaaaatctttacgagaccgtgaagaaggcgcagatggttgtccaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cttggaaacatgcaaaatctttacgagaccgtgaagaaggcgcagatggttgtccaagtt 416
Query: 301 gaagcagtgcgagtacagaaagaacttgctgcagcagagtttgatggttactgcgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaagcagtgcgagtacagaaagaacttgctgcagcagagtttgatggttactgcgaggat 476
Query: 361 gagttaattaaggtaacactatctgggaatcagcaacctataagaacaataattactgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gagttaattaaggtaacactatctgggaatcagcaacctataagaacaataattactgag 536
Query: 421 gctgctatggaattgggaccagaaaaactttcacttttagtcactgaggcatacaaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gctgctatggaattgggaccagaaaaactttcacttttagtcactgaggcatacaaggat 596
Query: 481 gcacatcagaagagtgtccaggccatgaaggaaagaatgagtggtcttgcgcagagcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gcacatcagaagagtgtccaggccatgaaggaaagaatgagtggtcttgcgcagagcttg 656
Query: 541 ggtatgccgccagggctcggtgaagggctaaaatga 576
||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggtatgccgccagggctcggtgaagggctaaaatga 692
>gnl|LJGI|TC77875 similar to UniRef100_O82230 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (45%)
Length = 749
Score = 864 bits (436), Expect = 0.0
Identities = 442/444 (99%)
Strand = Plus / Plus
Query: 1 atggcgtccactgtttctctcactggtcaattatcaaacatccacggagcaagtgaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggcgtccactgtttctctcactggtcaattatcaaacatccacggagcaagtgaaagg 232
Query: 61 aaaaagcttagccttttatcaacttctctctgtaaactaaactccagtgcgaatgtagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaaaagcttagccttttatcaacttctctctgtaaactaaactccagtgcgaatgtagtt 292
Query: 121 gacatgaggcctttatcccagcgtggacataaaaaagtagggcgtgatcgatgtttccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gacatgaggcctttatcccagcgtggacataaaaaagtagggcgtgatcgatgtttccga 352
Query: 181 gtttatgccctttttggaggaaaaaaggaaaataatgacggtgattctaagacaggaatg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 353 gtttatgccctttttggaggaaaaaaggaaaataatgacggcgattctaagacaggaatg 412
Query: 241 cttggaaacatgcaaaatctttacgagaccgtgaagaaggcgcagatggttgtccaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cttggaaacatgcaaaatctttacgagaccgtgaagaaggcgcagatggttgtccaagtt 472
Query: 301 gaagcagtgcgagtacagaaagaacttgctgcagcagagtttgatggttactgcgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaagcagtgcgagtacagaaagaacttgctgcagcagagtttgatggttactgcgaggat 532
Query: 361 gagttaattaaggtaacactatctgggaatcagcaacctataagaacaataattactgag 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 533 gagttaattaaggtaacactatctgggaatcagcaatctataagaacaataattactgag 592
Query: 421 gctgctatggaattgggaccagaa 444
||||||||||||||||||||||||
Sbjct: 593 gctgctatggaattgggaccagaa 616
>gnl|LJGI|TC63255 similar to UniRef100_O82230 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (63%)
Length = 730
Score = 321 bits (162), Expect = 3e-87
Identities = 270/306 (88%)
Strand = Plus / Plus
Query: 234 aggaatgcttggaaacatgcaaaatctttacgagaccgtgaagaaggcgcagatggttgt 293
|||||| ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 248 aggaattcttggaaacatgcaaaacctttatgagactgtgaagaaggcgcaaatggtcgt 307
Query: 294 ccaagttgaagcagtgcgagtacagaaagaacttgctgcagcagagtttgatggttactg 353
|||||||||||||||| | || || ||||||||||| |||||||| ||||||||||| ||
Sbjct: 308 ccaagttgaagcagtgagggtgcaaaaagaacttgcggcagcagaatttgatggttattg 367
Query: 354 cgaggatgagttaattaaggtaacactatctgggaatcagcaacctataagaacaataat 413
|||| ||||||| | |||||||| || ||||| || |||||||| || ||||| |||
Sbjct: 368 tgagggtgagttagtgaaggtaacgctgtctggaaaccagcaacccttacgaacagaaat 427
Query: 414 tactgaggctgctatggaattgggaccagaaaaactttcacttttagtcactgaggcata 473
||||||||| ||||||||||| ||| ||||||||||||| |||||| ||||||| || ||
Sbjct: 428 tactgaggcagctatggaattcggatcagaaaaactttcgcttttaatcactgaagctta 487
Query: 474 caaggatgcacatcagaagagtgtccaggccatgaaggaaagaatgagtggtcttgcgca 533
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 488 caaggatgcacaccagaagagtgtccaggccatgaaggaaagaatgagtgatcttgctca 547
Query: 534 gagctt 539
||||||
Sbjct: 548 gagctt 553
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 72 ccttttatcaacttctctctgtaaactaaactccagtgcgaatgtagttgacatga 127
||||| ||||||||||| ||||||||||||||||||| | | | ||||||||||||
Sbjct: 83 cctttcatcaacttctcactgtaaactaaactccagttcaagtatagttgacatga 138
>gnl|LJGI|TC81400 similar to UniRef100_A7PV25 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 832
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 490 aagagtgtccaggccatgaaggaaagaatgagtggtcttgcgcagagctt 539
|||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 5 aagagtgtccaggccatgaaggaaagaatgagtgatcttgctcagagctt 54