Miyakogusa Predicted Gene

Lj4g3v1968810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1968810.1 Non Characterized Hit- tr|C5Z6Q8|C5Z6Q8_SORBI
Putative uncharacterized protein Sb10g025360
OS=Sorghu,65.08,7e-19,SAM/Pointed domain,Sterile alpha motif/pointed
domain; no description,Sterile alpha motif/pointed do,CUFF.49982.1
         (270 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g116200.1 | SAM domain protein | HC | chr4:48069710-480704...   296   1e-80
Medtr2g450720.1 | SAM domain (sterile alpha motif) protein, puta...   221   7e-58
Medtr4g009760.1 | SAM domain protein | HC | chr4:2051908-2050607...   123   2e-28
Medtr2g104230.1 | SAM domain protein | HC | chr2:44907469-449087...   115   3e-26

>Medtr4g116200.1 | SAM domain protein | HC | chr4:48069710-48070498
           | 20130731
          Length = 256

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 171/278 (61%), Positives = 207/278 (74%), Gaps = 30/278 (10%)

Query: 1   MDWFSWLSRTSLDPSLIYDYGLIFARNELQLEDASHFNHEFLQSMGVSIAKHRLEILKLV 60
           MDWFSWLS+T+LD SLIYDYGLIF+RNELQLEDA++FNHEFLQSMG+SIAKHRLEILKLV
Sbjct: 1   MDWFSWLSKTTLDHSLIYDYGLIFSRNELQLEDATYFNHEFLQSMGISIAKHRLEILKLV 60

Query: 61  KKEQ-VAAAARPKKLSGVIKRYLRKCMNKFVFQEQLEVKKKNLXXXXXXXXXXXXXXXEG 119
           KKEQ +    RPK LSG IK+ L+KCM+  VF++  +  KKN+               E 
Sbjct: 61  KKEQELDQPLRPKNLSGTIKKCLKKCMS--VFRD--DSVKKNM--------PLPVVLHEP 108

Query: 120 NWYQ-EKWKGAIVKEER-QVPKYKSRTIALSGPLDGRMHE-KMINHNKSLKLSGPIDGR- 175
           NWYQ +KW+GA+VKEE+ Q P Y+SRT+  SGPLDGRMHE KM+++NK+LKLSGPIDGR 
Sbjct: 109 NWYQGQKWRGALVKEEKHQRPIYRSRTMPYSGPLDGRMHEQKMVSNNKALKLSGPIDGRL 168

Query: 176 MNERMMMYTNRSPLVSKPLERRFTAPRSPRVSGPLD--MMVENRTPRLARPSDATKAENE 233
           MNERMM+YTNRSPL S+ ++ RFT  +SP +SGPLD  +M ENR+P + R S     E +
Sbjct: 169 MNERMMIYTNRSPLRSRAIDGRFT--KSP-ISGPLDAKIMFENRSPTITRAS----VETD 221

Query: 234 NLMGY-SPYNKPKXXXXXXXXXXXHTLWPTLFQDLKPT 270
           + MGY SPYNKPK           H+LWPTLFQDL PT
Sbjct: 222 SPMGYSSPYNKPK---GDFDFDDEHSLWPTLFQDLNPT 256


>Medtr2g450720.1 | SAM domain (sterile alpha motif) protein,
           putative | HC | chr2:22538055-22536608 | 20130731
          Length = 239

 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/276 (46%), Positives = 165/276 (59%), Gaps = 43/276 (15%)

Query: 1   MDWFSWLSRTSLDPSLIYDYGLIFARNELQLEDASHFNHEFLQSMGVSIAKHRLEILKLV 60
           MDWFSWLS+T+LDP  +Y+Y L F RNELQL+D+ HFNHEFLQSMG+SIAKHRLEIL LV
Sbjct: 1   MDWFSWLSKTNLDPFQLYEYSLTFTRNELQLQDSIHFNHEFLQSMGISIAKHRLEILNLV 60

Query: 61  KKEQVAAAARPKKLSGVIKRYLRKCMNKFVFQE-QLEVKKKNLXXXXXXXXXXXXXXXEG 119
           K +         +LSGVIK+YL+KC++K +F E + E K  N+               E 
Sbjct: 61  KNQNEKVPKNSNRLSGVIKKYLKKCLSKIIFNEGKKEAKDMNM----------MSLQREQ 110

Query: 120 NWYQEKWKGAIVKEERQVPK--YKSRTIALSGPLDGRMH-EKMINHNKS-LKLSGPIDGR 175
           +W Q KW+ A+V EE +  K  +++R IA SGPLDGRMH EKM+  NK  LK SGP+DG+
Sbjct: 111 SWNQGKWRRALVSEELKGEKGMHRNRKIAFSGPLDGRMHSEKMVISNKKMLKFSGPLDGK 170

Query: 176 MNERMMMYTNRSPLVSKPLERRF-TAPRSPRVSGPLDMMVENRTPRLARPSDATKAENEN 234
           +N + M+YTNRSP+  +P++ RF    RSPR SGP++ +                     
Sbjct: 171 LNSK-MVYTNRSPVRKRPIDGRFMDTTRSPRFSGPINQIDFQ------------------ 211

Query: 235 LMGYSPYNKPKXXXXXXXXXXXHTLWPTLFQDLKPT 270
               SPYN  +             LW  LF DLKPT
Sbjct: 212 ----SPYNMTRDDYDFEDS----VLWRALFDDLKPT 239


>Medtr4g009760.1 | SAM domain protein | HC | chr4:2051908-2050607 |
           20130731
          Length = 208

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 93/150 (62%), Gaps = 5/150 (3%)

Query: 1   MDWFSWLSRTSLDPSLIYDYGLIFARNELQLEDASHFNHEFLQSMGVSIAKHRLEILKLV 60
           MDWFSWLS+T+LDPSL+Y+YGL FA NEL+ ED  +FNHEFLQSMG+SIAKHRLEILKL 
Sbjct: 1   MDWFSWLSKTNLDPSLVYEYGLTFAHNELEQEDMVYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  KKEQVA-AAARP-KKLSGVIKRYLRKCMNKFVFQEQLEVKKKNLXXXXXXXXXXXXXXXE 118
           +KE+      RP  K+ G IK+  +KC+  ++ ++ +  ++ N                 
Sbjct: 61  RKEKAKRQPPRPMAKIMGAIKK-TKKCLGNYIMRKLVTCEESNSALVVVPTSRASSSSYY 119

Query: 119 GNWYQEKWKGAIVKEERQVPKYKSRTIALS 148
           G   +  WK ++VK  +++   K   + L+
Sbjct: 120 GT--RSSWKNSVVKRNKKLKVDKQERLLLT 147


>Medtr2g104230.1 | SAM domain protein | HC | chr2:44907469-44908785
           | 20130731
          Length = 209

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 96/183 (52%), Gaps = 26/183 (14%)

Query: 1   MDWFSWLSRTSLDPSLIYDYGLIFARNELQLEDASHFNHEFLQSMGVSIAKHRLEILKLV 60
           MDWFSWLS+T+L+PSL+Y+YGL+FA+NEL+ ED  +FNHEFLQSMG+SIAKHRLEILKL 
Sbjct: 1   MDWFSWLSKTNLEPSLVYEYGLVFAQNELEEEDMFYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  KKEQVAAAARPKKLSGVIKRYLRKCMNKFVFQEQLEVKKKNLXXXXXXXXXXXXXXXEGN 120
           KK++  +     K    IKR  +K +  +V         + L                G 
Sbjct: 61  KKDKRKSPHTVAKFVAAIKR-TKKYLANYV---------RTLTHTEESALMVMPTRPNGG 110

Query: 121 WYQEKWKGAIVKEERQVPKYKSRTI---------------ALSGPLDGRMHEKMINHNKS 165
            +  +WK AI+K   +    K   +               ALSG LDG     + N  K 
Sbjct: 111 -FGRRWKSAIMKRNTKFVVAKQEKMFLTNGRSSMPKTVAPALSGDLDGFSSPVVYNFQKE 169

Query: 166 LKL 168
            K+
Sbjct: 170 QKM 172