Miyakogusa Predicted Gene
- Lj4g3v1894280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1894280.1 Non Chatacterized Hit- tr|B9RP17|B9RP17_RICCO
Calcium lipid binding protein, putative OS=Ricinus
com,69.35,3e-19,SUBFAMILY NOT NAMED,NULL; EXTENDED
SYNAPTOTAGMIN-RELATED,NULL; no description,NULL; C2 domain
(Calci,NODE_47875_length_433_cov_134.995377.path2.1
(192 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome... 381 e-105
gnl|LJGI|TC61568 similar to UniRef100_A7QTN2 Cluster: Chromosome... 159 7e-39
gnl|LJGI|FS347281 similar to UniRef100_A7QTN2 Cluster: Chromosom... 127 3e-29
gnl|LJGI|TC59476 similar to UniRef100_A7QTN2 Cluster: Chromosome... 113 4e-25
>gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 2668
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 1 atgctaattgttgaagtttgggaccacgacacatttggaaaggattatatggggagatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 atgctaattgttgaagtttgggaccacgacacatttggaaaggattatatggggagatgc 2226
Query: 61 atattgacgcttaccagagtaatactggagggggaatacaaagaacgttttgagctagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 atattgacgcttaccagagtaatactggagggggaatacaaagaacgttttgagctagat 2286
Query: 121 ggtgccaaatctggctatttgaatcttcatctcaagtggatgccccaaccaatttaccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2287 ggtgccaaatctggctatttgaatcttcatctcaagtggatgccccaaccaatttaccgc 2346
Query: 181 gattcttaaatt 192
||||||||||||
Sbjct: 2347 gattcttaaatt 2358
>gnl|LJGI|TC61568 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1227
Score = 159 bits (80), Expect = 7e-39
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 5 taattgttgaagtttgggaccacgacacatttggaaaggattatatggggagatgcatat 64
|||||||||||||||||||| | |||| ||||||||||||||||| || ||||| ||||
Sbjct: 841 taattgttgaagtttgggacaagaacacttttggaaaggattatataggaagatgtatat 900
Query: 65 tgacgcttaccagagtaatactggagggggaatacaaagaacgttttgagctagatggtg 124
|| ||||||||| ||||||||||||||||| |||| |||| ||||||| |||| |||||
Sbjct: 901 tgtcgcttaccaaggtaatactggagggggattacacagaaagttttgaactagttggtg 960
Query: 125 ccaaatctggctatttgaatcttcatctcaagtgga 160
| |||||||||| |||||| || |||||||||||||
Sbjct: 961 cgaaatctggctctttgaaactccatctcaagtgga 996
>gnl|LJGI|FS347281 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 709
Score = 127 bits (64), Expect = 3e-29
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 5 taattgttgaagtttgggaccacgacacatttggaaaggattatatggggagatgcatat 64
|||||||||||||||||||| | ||||| ||||||||||||||||| || ||||| ||||
Sbjct: 452 taattgttgaagtttgggacaaggacacttttggaaaggattatataggaagatgtatat 393
Query: 65 tgacgcttaccagagtaatactggagggggaatacaaagaacgttttgagctagatggtg 124
| ||||||||| |||||||||||||||||||||| ||| ||||||| ||| |||||
Sbjct: 392 tatcgcttaccaaggtaatactggagggggaatacacagacagttttgatttagttggtg 333
Query: 125 ccaaatctggctatttgaatcttcatctcaag 156
| |||||||| | |||| | || |||||||||
Sbjct: 332 cgaaatctggttctttggaactccatctcaag 301
>gnl|LJGI|TC59476 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 757
Score = 113 bits (57), Expect = 4e-25
Identities = 134/159 (84%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 5 taattgttgaagtttgggaccacgacacatttggaaaggat---tatatggggagatgca 61
|||||| ||||||||||||| | ||| | |||||||||||| ||||| || |||||||
Sbjct: 367 taattgctgaagtttgggacaaggacccttttggaaaggatgattatattggaagatgca 426
Query: 62 tattgacgcttaccagagtaatactggagggggaatacaaagaacgttttgagctagatg 121
||||| | ||||||| |||||||| ||||||||||||| |||| ||||||| |||| ||
Sbjct: 427 tattgtcacttaccaaggtaatactagagggggaatacacagaaagttttgaactagttg 486
Query: 122 gtgccaaatctggctatttgaatcttcatctcaagtgga 160
|||| ||||||| | |||||| || |||||||||||||
Sbjct: 487 gtgcgcaatctggttctttgaaactccatctcaagtgga 525