Miyakogusa Predicted Gene
- Lj4g3v1746250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1746250.1 Non Chatacterized Hit- tr|K4B147|K4B147_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40,1e-17,ZF_PHD_2,Zinc finger, PHD-finger; seg,NULL; PHD zinc
finger,Zinc finger, PHD-type; no description,Zi,CUFF.49669.1
(551 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g08990.1 139 6e-33
Glyma10g29040.1 93 7e-19
Glyma20g38280.1 91 3e-18
Glyma05g07500.1 90 8e-18
Glyma13g23910.1 53 1e-06
Glyma19g01310.1 52 2e-06
Glyma11g11720.1 50 8e-06
Glyma14g37420.1 50 8e-06
>Glyma17g08990.1
Length = 204
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 126/209 (60%), Gaps = 17/209 (8%)
Query: 50 ITTGPVGSNGEAKCSVCLIESHENLLLVCDLCSTVSHSFCTGLGFTVPEGDWFCPDCATA 109
+ TGP S E KC VC + E+LLL+CDLC T SH++C GLG+TVPEGDWFC DCA +
Sbjct: 1 MATGPADSYTETKCGVCHAGTDEHLLLLCDLCDTASHTYCVGLGYTVPEGDWFCHDCAIS 60
Query: 110 RESVNSTNEESEQQNV-------SSVTISDIVRGPGRSNQVDGRSVTXXXXXXXXXAPVI 162
R+ +N E+S+QQNV +V I DIVR G +QV R VI
Sbjct: 61 RK-IN-IKEDSDQQNVVPTAEPRVTVDIFDIVRETG--SQVVQRPRASPLQQNLSSPSVI 116
Query: 163 SLPDRVSGFN---ANIPVSRVELAKHRVQAIRANWNALRTGSLRF-SNSAQSGGTASEKQ 218
LPDR+S + PV+ + V+A R NWNALR+GSL+F NS+Q G T S+KQ
Sbjct: 117 PLPDRLSYLSRLKGKRPVTGFCHMQRNVKAFRENWNALRSGSLQFRCNSSQPGSTVSQKQ 176
Query: 219 ESGSLSGGKLNVSPSMASGSGGLQQSAVQ 247
+S SLS KL+ SMAS S LQQS VQ
Sbjct: 177 DSSSLSHHKLDDLHSMASTS--LQQSTVQ 203
>Glyma10g29040.1
Length = 759
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 MEWAKHESRCPLCRQRFSNIRRPP--MLGLFPSSRDVNVPCRDQATHSYGNITTGPVGSN 58
MEWAK ESRCPLC+QRF I +P G+ + VP RDQ +
Sbjct: 423 MEWAKVESRCPLCKQRFKTISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPY 482
Query: 59 GEAKCSVCLIESHENLLLVCDLCSTVSHSFCTGLGFTVPEGDWFCPDC 106
CS C + L+L+CD+C + +H++C GLG VPEG+W+C C
Sbjct: 483 EYVMCSECHQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGC 530
>Glyma20g38280.1
Length = 794
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 MEWAKHESRCPLCRQRFSNIRRPP--MLGLFPSSRDVNVPCRDQATHSYGNITTGPVGSN 58
MEWAK ESRCPLC+QRF I +P G+ + VP RDQ +
Sbjct: 372 MEWAKVESRCPLCKQRFKAISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPY 431
Query: 59 GEAKCSVCLIESHENLLLVCDLCSTVSHSFCTGLGFTVPEGDWFCPDC 106
CS C + L+L+CD+C + +H++C GLG VPEG+W+C C
Sbjct: 432 EYVICSECHQGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGC 479
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 448 NFEEAKDEIKSLVKTNLKFLTKDKKLGVETFKIVARQATHSILAACXXXXXXXXX-XXXX 506
NF AK++++S+VK++LK L+++ LG T K +AR + H+ILAAC
Sbjct: 684 NFHFAKEQLQSMVKSHLKSLSQNIDLGHNTIKDIARSSMHTILAACDLEHMKSEVCTVPP 743
Query: 507 XXXXHHDHNQQLKKSTLMPNCCSQCFDVFVNNTVNSILLDKV 548
H +++L+ CCS CFD FV + V IL ++
Sbjct: 744 PSACSHMELMAGGQTSLIKGCCSSCFDSFVGDVVKRILDTRI 785
>Glyma05g07500.1
Length = 369
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 53/83 (63%)
Query: 469 KDKKLGVETFKIVARQATHSILAACXXXXXXXXXXXXXXXXXHHDHNQQLKKSTLMPNCC 528
++KK V+TFK+VARQATH+ILA C H D+ Q +KSTLMPNCC
Sbjct: 287 EEKKQSVDTFKVVARQATHTILATCSSDQQKSSTSSSSSVCSHADNTPQFQKSTLMPNCC 346
Query: 529 SQCFDVFVNNTVNSILLDKVGRA 551
QCF FVNN VNS +L+KVG A
Sbjct: 347 RQCFYDFVNNVVNSTILEKVGCA 369
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 110/255 (43%), Gaps = 70/255 (27%)
Query: 114 NSTNEESEQQNVSSVTIS--DIVRGPGRSNQVDGRSVTXXXXXXXXXAPVISLPDRVSGF 171
N TN+ SVTI+ DIVR G ++V R +PVI LPDR+S
Sbjct: 108 NQTNKNFAPTAEPSVTINIFDIVRETG--SRVVNRP-RASPLQQNLSSPVIPLPDRLSYL 164
Query: 172 N---ANIPVSRVELAKHRVQAIRANWNALRTGSLRFS-NSAQSGGTASEKQESGSLSGGK 227
+ PV+ V + V+ R NWNALR+GS +F NS Q G S GK
Sbjct: 165 SRLKGKGPVTGVCNMQRNVKVFRENWNALRSGSFQFRCNSFQPG------------STGK 212
Query: 228 LNVSPSMASGSGGLQQSAVQGGSSSNGLNDRGMNDVEKAWKMMDRAKMKKQTHQRTSSIP 287
+ +P H RT SI
Sbjct: 213 EDTTP-----------------------------------------------HHRTGSIL 225
Query: 288 QRAGNPSRSG-AREMSLSHFDCPASENQQLRKLDSRHTRMDKKREYSSLNKNLGNHKYPM 346
Q PS SG AR++SL+H+ ++Q + L R+T+M+K+ +YSSLN+NL N
Sbjct: 226 QGVDKPSCSGGARKISLAHYIFSEQKDQHFKALVLRNTKMEKQCDYSSLNQNLENRSTLN 285
Query: 347 SGEKRQSRVETMQHV 361
EK+QS V+T + V
Sbjct: 286 LEEKKQS-VDTFKVV 299
>Glyma13g23910.1
Length = 2142
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 54 PVGSNGEAKCSVCLIESHENLLLVCDLCSTVSHSFCTGLGFT-VPEGDWFCPDCATARES 112
P E C VC I+ ++ +L+CD C H++C +PEG+W+CP C + +
Sbjct: 1283 PKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVVGKHA 1342
Query: 113 VNSTNEESE 121
+ E ++
Sbjct: 1343 TQNVTERTQ 1351
>Glyma19g01310.1
Length = 2092
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 54 PVGSNGEAKCSVCLIESHENLLLVCDLCSTVSHSFCTGLGFT-VPEGDWFCPDCATARES 112
P E C VC I+ ++ +L+CD C H++C +PEG+W+CP C + +
Sbjct: 1220 PKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDGKRA 1279
Query: 113 VNSTNEESE 121
E ++
Sbjct: 1280 TQDVTERTK 1288
>Glyma11g11720.1
Length = 1445
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 63 CSVCLIESHENLLLVCDLCST-VSHSFCT-GLGFTVPEGDWFCPDCATARESVNSTNEES 120
C +C E+LL +C CS H++C + VPEGDW C +C A E+ N +
Sbjct: 274 CDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANRKLDIE 333
Query: 121 EQQNVSSVTISDIV-RGPGRSNQVDGRSVTXXXXXXXXXAPVISLPDRVSGFNANIPVSR 179
E++N + S I + P +S ++ + +P S P R+ +P+SR
Sbjct: 334 EKKNHKVSSTSQISGKRPSQSMEI-ATAAKRQALESSTGSPKASSPKRI------VPLSR 386
>Glyma14g37420.1
Length = 860
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 21/102 (20%)
Query: 34 DVNVPCRDQATHSYGNITTGPVGSNGEAKCSVCLIESHENLLLVCDLCSTVSHSFCTGLG 93
D+N PC D NI CSVC + L++CD C + HS C GL
Sbjct: 549 DMNRPCSDLCEGENDNI------------CSVC---QYGGELVLCDRCPSAFHSACLGLE 593
Query: 94 FTVPEGDWFCPD--CATARESVNSTNEESEQQ---NVSSVTI 130
+P+GDWFCP C R++ E+++ N+SS+
Sbjct: 594 -DIPDGDWFCPSCRCGICRQTKIEGTEDADLHICFNISSILF 634