Miyakogusa Predicted Gene

Lj4g3v1645620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1645620.1 Non Characterized Hit- tr|C5Y7F1|C5Y7F1_SORBI
Putative uncharacterized protein Sb05g025970
OS=Sorghu,45.19,1e-18,seg,NULL,CUFF.49531.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108720.1 | MADS-box transcription factor family protein |...   335   2e-92
Medtr4g108720.2 | MADS-box transcription factor family protein |...   335   2e-92
Medtr4g108720.3 | MADS-box transcription factor family protein |...   335   2e-92
Medtr5g041650.1 | MADS-box transcription factor family protein |...    95   5e-20

>Medtr4g108720.1 | MADS-box transcription factor family protein | HC
           | chr4:45025437-45028727 | 20130731
          Length = 356

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/229 (71%), Positives = 187/229 (81%), Gaps = 2/229 (0%)

Query: 9   LFYICNFFSYWNNLEKINHLEHLRQMEESLRESINRVCIQKENLGKQQLISLDCANQLPE 68
           L  I    SYW+NLEKIN+LEHLRQME+SLRESINR+ IQKENL K QL+SL+C NQLPE
Sbjct: 128 LAEIQQRLSYWSNLEKINNLEHLRQMEDSLRESINRLSIQKENLEKHQLMSLECVNQLPE 187

Query: 69  GMTLPLMMAGLQESQPLSWLLNSDNHQLMLPSEPKYLPYSNNNNREAECSTDISLPGYSG 128
           GM+LPLMM+GLQESQPLSWLL+ DNHQLMLPSEPK++P+S+N NR+ ECSTDISLP YSG
Sbjct: 188 GMSLPLMMSGLQESQPLSWLLSGDNHQLMLPSEPKFMPFSDNGNRDVECSTDISLPSYSG 247

Query: 129 YVGGTKLEVGGSPHVTTXXXXXXXXXXXXXX-TDYLNVQRCEQFSC-PPQDIEEVKHHQT 186
           Y G  KLEVG SPHVTT               + YLNVQ+C+QF+  PPQD+EEVKHHQ 
Sbjct: 248 YTGNCKLEVGSSPHVTTLGQGGGTLNELNGNPSPYLNVQQCQQFAYPPPQDLEEVKHHQA 307

Query: 187 MNSKPNTLDYEVNNNLDLPRSLFENGHQFWNPASGSCGIAMYNENGYHR 235
           +NSK N +DY+VNNN DLP+SLFENGHQFWN  +GSCGIAMYNENGYHR
Sbjct: 308 INSKSNNVDYQVNNNYDLPKSLFENGHQFWNSTNGSCGIAMYNENGYHR 356


>Medtr4g108720.2 | MADS-box transcription factor family protein | HC
           | chr4:45025437-45028727 | 20130731
          Length = 356

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/229 (71%), Positives = 187/229 (81%), Gaps = 2/229 (0%)

Query: 9   LFYICNFFSYWNNLEKINHLEHLRQMEESLRESINRVCIQKENLGKQQLISLDCANQLPE 68
           L  I    SYW+NLEKIN+LEHLRQME+SLRESINR+ IQKENL K QL+SL+C NQLPE
Sbjct: 128 LAEIQQRLSYWSNLEKINNLEHLRQMEDSLRESINRLSIQKENLEKHQLMSLECVNQLPE 187

Query: 69  GMTLPLMMAGLQESQPLSWLLNSDNHQLMLPSEPKYLPYSNNNNREAECSTDISLPGYSG 128
           GM+LPLMM+GLQESQPLSWLL+ DNHQLMLPSEPK++P+S+N NR+ ECSTDISLP YSG
Sbjct: 188 GMSLPLMMSGLQESQPLSWLLSGDNHQLMLPSEPKFMPFSDNGNRDVECSTDISLPSYSG 247

Query: 129 YVGGTKLEVGGSPHVTTXXXXXXXXXXXXXX-TDYLNVQRCEQFSC-PPQDIEEVKHHQT 186
           Y G  KLEVG SPHVTT               + YLNVQ+C+QF+  PPQD+EEVKHHQ 
Sbjct: 248 YTGNCKLEVGSSPHVTTLGQGGGTLNELNGNPSPYLNVQQCQQFAYPPPQDLEEVKHHQA 307

Query: 187 MNSKPNTLDYEVNNNLDLPRSLFENGHQFWNPASGSCGIAMYNENGYHR 235
           +NSK N +DY+VNNN DLP+SLFENGHQFWN  +GSCGIAMYNENGYHR
Sbjct: 308 INSKSNNVDYQVNNNYDLPKSLFENGHQFWNSTNGSCGIAMYNENGYHR 356


>Medtr4g108720.3 | MADS-box transcription factor family protein | HC
           | chr4:45025437-45028727 | 20130731
          Length = 356

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/229 (71%), Positives = 187/229 (81%), Gaps = 2/229 (0%)

Query: 9   LFYICNFFSYWNNLEKINHLEHLRQMEESLRESINRVCIQKENLGKQQLISLDCANQLPE 68
           L  I    SYW+NLEKIN+LEHLRQME+SLRESINR+ IQKENL K QL+SL+C NQLPE
Sbjct: 128 LAEIQQRLSYWSNLEKINNLEHLRQMEDSLRESINRLSIQKENLEKHQLMSLECVNQLPE 187

Query: 69  GMTLPLMMAGLQESQPLSWLLNSDNHQLMLPSEPKYLPYSNNNNREAECSTDISLPGYSG 128
           GM+LPLMM+GLQESQPLSWLL+ DNHQLMLPSEPK++P+S+N NR+ ECSTDISLP YSG
Sbjct: 188 GMSLPLMMSGLQESQPLSWLLSGDNHQLMLPSEPKFMPFSDNGNRDVECSTDISLPSYSG 247

Query: 129 YVGGTKLEVGGSPHVTTXXXXXXXXXXXXXX-TDYLNVQRCEQFSC-PPQDIEEVKHHQT 186
           Y G  KLEVG SPHVTT               + YLNVQ+C+QF+  PPQD+EEVKHHQ 
Sbjct: 248 YTGNCKLEVGSSPHVTTLGQGGGTLNELNGNPSPYLNVQQCQQFAYPPPQDLEEVKHHQA 307

Query: 187 MNSKPNTLDYEVNNNLDLPRSLFENGHQFWNPASGSCGIAMYNENGYHR 235
           +NSK N +DY+VNNN DLP+SLFENGHQFWN  +GSCGIAMYNENGYHR
Sbjct: 308 INSKSNNVDYQVNNNYDLPKSLFENGHQFWNSTNGSCGIAMYNENGYHR 356


>Medtr5g041650.1 | MADS-box transcription factor family protein | HC
           | chr5:18283169-18288697 | 20130731
          Length = 402

 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 20/228 (8%)

Query: 16  FSYWNNLEKINHLEHLRQMEESLRESINRVCIQKENLGKQQLISLDCANQLPEGMTLPLM 75
            S W+++EKI+ ++ L Q+E SL+ES+N++   KEN+ KQQL SL C NQ  E + LP  
Sbjct: 172 LSNWSDIEKISSVDKLGQLENSLKESLNQIQTHKENVQKQQLASLQCNNQFNE-LQLPYK 230

Query: 76  MAGLQESQPLSWLLNSDNHQLMLPSEPKYLPYSNNNNREAECSTDISLPGYSGYVG-GTK 134
           M+  Q  Q LSW++N D+  L+LP +   L +     ++ E ST  S   Y+ Y+G  TK
Sbjct: 231 MSHQQHLQSLSWMVNGDSQNLVLPEDSNLLLH-----KDVEGSTSSSFGSYASYLGSSTK 285

Query: 135 LEVGGSPHVTTXXXXXXXXXXXXXXTDYLNVQRCEQFSCPPQDIEEVKHHQTM------N 188
             +  S   +                   N     Q    P +   +   +        N
Sbjct: 286 TNMSNSGQESCIINDMSNTTTAPVRLQQFN----GQVPYIPNNFNIMNDMKLQPVTGMNN 341

Query: 189 SKPNTLD-YEVNNNLDLPRSLFE--NGHQFWNPASGSCGIAMYNENGY 233
              N +D Y VN N + PR  F+  N H  W   SG C + +++E+ Y
Sbjct: 342 PHENQVDNYHVNANFEAPRQGFDQSNNHHGWTSNSGPCAVNIFDEHLY 389