Miyakogusa Predicted Gene

Lj4g3v1426400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1426400.1 Non Chatacterized Hit- tr|D7MGN7|D7MGN7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,43.85,0.000000000000002,seg,NULL,CUFF.49229.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09190.1                                                       171   3e-43
Glyma05g02640.1                                                       161   2e-40

>Glyma17g09190.1 
          Length = 148

 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/147 (66%), Positives = 108/147 (73%), Gaps = 10/147 (6%)

Query: 1   MKKRPELEQ-QHHDQDLEVMKAVAQAWYSHSGSSRPMSEFDAPRGNFKG-KPSRFKLEAL 58
           MKKRPE++Q QH  QDLEV+KAVAQAWYSHSG+S+PMSEF A R NF+G KPSRFKLEAL
Sbjct: 1   MKKRPEIQQHQHEPQDLEVLKAVAQAWYSHSGTSKPMSEFYAHRRNFRGSKPSRFKLEAL 60

Query: 59  NKPXXXXXXXXXXXXXXXXCWDFKQSLWDPYELVTVSRRIETGLALDSPFDEFLCCSPRI 118
           NKP                 WDF+QSLWD YELVTVSRRIETGL LD+PFDE LC S  I
Sbjct: 61  NKP----QASSSSRDTTTIYWDFQQSLWDSYELVTVSRRIETGLTLDNPFDE-LCGSASI 115

Query: 119 QQPRGKLESKNSLRSLFK--HSKRFIA 143
           Q  R K ESKNSLR+LF    S+RF A
Sbjct: 116 QHKR-KPESKNSLRNLFNLMSSRRFNA 141


>Glyma05g02640.1 
          Length = 129

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 100/135 (74%), Gaps = 10/135 (7%)

Query: 9   QQHHDQDLEVMKAVAQAWYSHSGSSRPMSEFDAPRGNFKGKPSRFKLEALNKPXXXXXXX 68
           QQH  QD EV+KAVAQAWYSHSG+ +PMSEF+A R NF+GKPSRFKLEALNKP       
Sbjct: 3   QQH--QDFEVLKAVAQAWYSHSGTCKPMSEFEAHRRNFRGKPSRFKLEALNKPQASSSSS 60

Query: 69  XXXXXXXXXCWDFKQSLWDPYELVTVSRRIETGLALDSPFDEFLCCSPRIQQPRGKLESK 128
                     WDF+QSLWD YELVTVSRRIETGL LD+PFDE LC SP IQQ R K ESK
Sbjct: 61  RDTSTY----WDFQQSLWDSYELVTVSRRIETGLTLDNPFDE-LCGSPPIQQKR-KPESK 114

Query: 129 NSLRSLFK--HSKRF 141
           NSLR+LF    S+RF
Sbjct: 115 NSLRNLFNLMSSRRF 129