Miyakogusa Predicted Gene

Lj4g3v1411020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1411020.1 Non Chatacterized Hit- tr|F4IBV2|F4IBV2_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At1,48.48,0.000000000000007,CENP-X,CENP-S complex, centromere
protein X; seg,NULL,CUFF.49210.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02820.1                                                       120   3e-28
Glyma17g13490.1                                                       115   1e-26

>Glyma05g02820.1 
          Length = 103

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 69/103 (66%)

Query: 1   MEEPTFELDLIRSILKRVWELRALERENVGPSEALDSEVGAGTSKKNRPTSANANALKLT 60
           MEE TFE DLI SILKR W L+ALERENV  ++  DSEVG GTSKKNR TSANANALKLT
Sbjct: 1   MEEVTFECDLIHSILKRFWTLQALERENVEANDPPDSEVGVGTSKKNRSTSANANALKLT 60

Query: 61  CELLRVFITXXXXXXXXXXXXXXXXXXXXXHLECILPQLLLDF 103
            ELLR+FIT                     HLE ILPQLLLDF
Sbjct: 61  SELLRIFITEAVQRAATIAEAEGASQIEPTHLEIILPQLLLDF 103


>Glyma17g13490.1 
          Length = 101

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 64/96 (66%)

Query: 8   LDLIRSILKRVWELRALERENVGPSEALDSEVGAGTSKKNRPTSANANALKLTCELLRVF 67
            DLI SILKR W LRALERENV  ++A DSEVG GTSKKNR TSANANALKLT ELLR+F
Sbjct: 6   FDLIHSILKRFWTLRALERENVEANDAPDSEVGVGTSKKNRSTSANANALKLTSELLRIF 65

Query: 68  ITXXXXXXXXXXXXXXXXXXXXXHLECILPQLLLDF 103
           IT                     HLE ILPQLLLDF
Sbjct: 66  ITEAVQRAAATAEVEGASQLEPTHLEIILPQLLLDF 101