Miyakogusa Predicted Gene

Lj4g3v1411020.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1411020.1 Non Chatacterized Hit- tr|F4IBV2|F4IBV2_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At1,48.48,0.000000000000007,CENP-X,CENP-S complex, centromere
protein X; seg,NULL,CUFF.49210.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71648 similar to UniRef100_A7PCM9 Cluster: Chromosome...   624   e-179
gnl|LJGI|FS326130 similar to UniRef100_Q08UM5 Cluster: Immediate...    78   4e-14
gnl|LJGI|TC74769 similar to UniRef100_A7Q3Y9 Cluster: Chromosome...    78   4e-14

>gnl|LJGI|TC71648 similar to UniRef100_A7PCM9 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 792

 Score =  624 bits (315), Expect = e-179
 Identities = 315/315 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggaacccacctttgaacttgatctgattcgctccattctgaagcgcgtttgggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  atggaggaacccacctttgaacttgatctgattcgctccattctgaagcgcgtttgggaa 146

                                                                       
Query: 61  ctgcgggcccttgagcgtgaaaatgttggacccagcgaggctttggattctgaggtagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ctgcgggcccttgagcgtgaaaatgttggacccagcgaggctttggattctgaggtagga 206

                                                                       
Query: 121 gctggaacatccaagaaaaatcgaccaacttcagctaatgcgaatgctttgaagcttacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gctggaacatccaagaaaaatcgaccaacttcagctaatgcgaatgctttgaagcttacc 266

                                                                       
Query: 181 tgtgaacttctccgagtttttatcacagaggctgttcagcgtgctgctgaggttgcagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgtgaacttctccgagtttttatcacagaggctgttcagcgtgctgctgaggttgcagag 326

                                                                       
Query: 241 gctgagggtgctagtcaagtagaagcttctcatttggagtgcattcttcctcagttactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctgagggtgctagtcaagtagaagcttctcatttggagtgcattcttcctcagttactt 386

                          
Query: 301 ttagatttttaaagc 315
           |||||||||||||||
Sbjct: 387 ttagatttttaaagc 401


>gnl|LJGI|FS326130 similar to UniRef100_Q08UM5 Cluster: Immediate early protein ICP0;
           n=1; Stigmatella aurantiaca DW4/3-1|Rep: Immediate
           early, partial (2%)
          Length = 786

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 76  cgtgaaaatgttggacccagcgaggctttggattctgag 114
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cgtgaaaatgttggacccagcgaggctttggattctgag 229


>gnl|LJGI|TC74769 similar to UniRef100_A7Q3Y9 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 804

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 76  cgtgaaaatgttggacccagcgaggctttggattctgag 114
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgaaaatgttggacccagcgaggctttggattctgag 279