Miyakogusa Predicted Gene
- Lj4g3v1388350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v1388350.1 Non Chatacterized Hit- tr|I1MUP0|I1MUP0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.66,0,URIDINE
CYTIDINE KINASE,Uridine kinase-like protein; URIDINE KINASE,NULL;
PRK,Phosphoribulokinase/ur,CUFF.49110.1
(888 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322737 similar to UniRef100_Q0J0L4 Cluster: Os09g0505... 1445 0.0
gnl|LJGI|TC59623 161 9e-39
gnl|LJGI|TC58552 homologue to UniRef100_A7QQE3 Cluster: Chromoso... 115 5e-25
gnl|LJGI|TC57283 homologue to UniRef100_A7QQE3 Cluster: Chromoso... 76 4e-13
gnl|LJGI|TC64260 homologue to UniRef100_A7PHF5 Cluster: Chromoso... 60 2e-08
>gnl|LJGI|FS322737 similar to UniRef100_Q0J0L4 Cluster: Os09g0505800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os09g0505800 protein -
Oryza sativa subsp. japonica (Rice), partial (43%)
Length = 757
Score = 1445 bits (729), Expect = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 1 atggacgacgaaatggaagctctctccggcgcgcacttctccggttggcatccttcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 atggacgacgaaatggaagctctctccggcgcgcacttctccggttggcatccttcaaca 88
Query: 61 ccgtcgtcttcttctccaacgccatcaccctcactttcccatccacccttcgtcatcggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ccgtcgtcttcttctccaacgccatcaccctcactttcccatccacccttcgtcatcggt 148
Query: 121 gtctctggaggtacggcatcggggaaaaccacagtttgtgatatgatcattcaacaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtctctggaggtacggcatcggggaaaaccacagtttgtgatatgatcattcaacaactg 208
Query: 181 caagatcacagagttgtgctcgtcagccaggattcgttctatcgtggtttaacaaatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 caagatcacagagttgtgctcgtcagccaggattcgttctatcgtggtttaacaaatgaa 268
Query: 241 gagttgaaacgaggtcatgagtataattttgatcatcctgatgcatttgatacggagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gagttgaaacgaggtcatgagtataattttgatcatcctgatgcatttgatacggagcag 328
Query: 301 cttgtagaaacactcagccagctcaaatctggacagtcagttcaggttccaatatatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cttgtagaaacactcagccagctcaaatctggacagtcagttcaggttccaatatatgat 388
Query: 361 tttaagctccaccagagatcttctgacactttccgacaggtcaatgcatctgaagtaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tttaagctccaccagagatcttctgacactttccgacaggtcaatgcatctgaagtaatc 448
Query: 421 atcctagagggtatattggtttttcatgaacaacgtgtccgcaacatgatggatatgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atcctagagggtatattggtttttcatgaacaacgtgtccgcaacatgatggatatgaag 508
Query: 481 atatttgttgatgcagatcctgatgtaaggcttgctcgcagaatacgacgtgatactgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atatttgttgatgcagatcctgatgtaaggcttgctcgcagaatacgacgtgatactgtt 568
Query: 541 gataggggtagagatgtactctcagtactggaacagtatgcaaaatttgtcaagcctgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gataggggtagagatgtactctcagtactggaacagtatgcaaaatttgtcaagcctgcc 628
Query: 601 ttcgatgactttattcttccatccaaaaagtatgctgatgtcatcatacctcgtggggga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttcgatgactttattcttccatccaaaaagtatgctgatgtcatcatacctcgtggggga 688
Query: 661 gacaatcatgtagcaattgacctgattgttcaacatatccgtactaagcttggccaacat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gacaatcatgtagcaattgacctgattgttcaacatatccgtactaagcttggccaacat 748
Query: 721 aacctctgt 729
|||||||||
Sbjct: 749 aacctctgt 757
>gnl|LJGI|TC59623
Length = 834
Score = 161 bits (81), Expect = 9e-39
Identities = 261/321 (81%)
Strand = Plus / Plus
Query: 379 tcttctgacactttccgacaggtcaatgcatctgaagtaatcatcctagagggtatattg 438
|||||||| | ||| || ||||||||||| ||||| || ||||| |||| || || |
Sbjct: 514 tcttctgatagttttcgtcaggtcaatgcctctgatgtcatcatattagaaggaattctt 573
Query: 439 gtttttcatgaacaacgtgtccgcaacatgatggatatgaagatatttgttgatgcagat 498
|| || ||||| ||| |||||||| | ||||| | |||||||| ||||||||| |||||
Sbjct: 574 gtgttccatgatcaaggtgtccgcgatctgatgaacatgaagatctttgttgatacagat 633
Query: 499 cctgatgtaaggcttgctcgcagaatacgacgtgatactgttgataggggtagagatgta 558
||||||| |||||||||| ||||| ||||||| ||||| || ||||| || ||| ||
Sbjct: 634 gctgatgtgcggcttgctcgtagaattagacgtgacactgtggagaggggcagggatata 693
Query: 559 ctctcagtactggaacagtatgcaaaatttgtcaagcctgccttcgatgactttattctt 618
||| || || |||||||||||||| ||||| |||||||| |||||||| ||| ||||
Sbjct: 694 aactctgttcttgaacagtatgcaaagtttgttaagcctgcattcgatgattttgttctg 753
Query: 619 ccatccaaaaagtatgctgatgtcatcatacctcgtgggggagacaatcatgtagcaatt 678
||||| || |||||||||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 754 ccatcaaagaagtatgctgatgtgatcattcctcgtggaggtgataatcatgttgccatt 813
Query: 679 gacctgattgttcaacatatc 699
|| ||||||| |||||||||
Sbjct: 814 gatttgattgtgcaacatatc 834
>gnl|LJGI|TC58552 homologue to UniRef100_A7QQE3 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 2240
Score = 115 bits (58), Expect = 5e-25
Identities = 160/194 (82%)
Strand = Plus / Plus
Query: 574 cagtatgcaaaatttgtcaagcctgccttcgatgactttattcttccatccaaaaagtat 633
|||||| | |||||||| ||||| || || ||||||||||| |||||| | || ||||||
Sbjct: 666 cagtattctaaatttgtgaagccagcttttgatgactttatccttccaacaaagaagtat 725
Query: 634 gctgatgtcatcatacctcgtgggggagacaatcatgtagcaattgacctgattgttcaa 693
|| ||| |||| ||||| ||||| ||||| |||||||| || ||||| ||||||| |||
Sbjct: 726 gcagatatcattataccccgtggaggagataatcatgtggctattgatttgattgtacaa 785
Query: 694 catatccgtactaagcttggccaacataacctctgtaagatatatccaaatttgaatgtg 753
|| || ||||| |||||||| || ||| |||| ||||| |||||||| ||||| ||||
Sbjct: 786 cacattcgtacaaagcttggtcagcatgacctgtgtaaaatatatcctaatttatatgtc 845
Query: 754 atacagtctacttt 767
|| |||||||||||
Sbjct: 846 attcagtctacttt 859
Score = 52.0 bits (26), Expect = 6e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 152 cagtttgtgatatgatcattcaacaactgcaagatcacagagttgt 197
|||||||||||||||| |||||||| || || ||||| ||||||||
Sbjct: 244 cagtttgtgatatgattattcaacagcttcatgatcaaagagttgt 289
>gnl|LJGI|TC57283 homologue to UniRef100_A7QQE3 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (88%)
Length = 1847
Score = 75.8 bits (38), Expect = 4e-13
Identities = 138/170 (81%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 583 aaatttgtcaagcctgccttcgatgactttattcttccatccaaaaagtatgctgatgtc 642
||||| || ||||| || || |||||||||||||||||| | || ||||| |||||| |
Sbjct: 743 aaattcgtgaagccagcttttgatgactttattcttccaac-aagaagtacgctgatata 801
Query: 643 atcatacctcgtgggggagacaatcatgtagcaattgacctgattgttcaacatatccgt 702
|| ||||| ||||| ||||| |||||||| || ||| ||||||| || ||||||||
Sbjct: 802 attataccccgtggaggagataatcatgtggcctgtgatttgattgtacagcatatccgc 861
Query: 703 actaagcttggccaacataacctctgtaagatatatccaaatttgaatgt 752
|| ||||| || || ||| |||| ||||| ||||||||||||||| ||||
Sbjct: 862 acaaagctcggtcagcatgacctttgtaaaatatatccaaatttgtatgt 911
>gnl|LJGI|TC64260 homologue to UniRef100_A7PHF5 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (48%)
Length = 969
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 793 attcgtgacaaggaaatatcaaaacatgactttgttttttattcaaatcg 842
||||||||||| || |||||||| ||||||||||| ||||||||| ||||
Sbjct: 12 attcgtgacaaagacatatcaaagcatgactttgtattttattcagatcg 61