Miyakogusa Predicted Gene

Lj4g3v1259140.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1259140.1 Non Chatacterized Hit- tr|H2ATW2|H2ATW2_KAZAF
Uncharacterized protein OS=Kazachstania africana (stra,25.4,8,
,CUFF.48728.1
         (636 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75380 similar to UniRef100_Q39IC7 Cluster: Oligoribon...   856   0.0  

>gnl|LJGI|TC75380 similar to UniRef100_Q39IC7 Cluster: Oligoribonuclease; n=1;
           Burkholderia sp. 383|Rep: Oligoribonuclease -
           Burkholderia sp. (strain 383) (Burkholderia cepacia
           (strain ATCC 17760/ NCIB 9086 / R18194)), partial (9%)
          Length = 976

 Score =  856 bits (432), Expect = 0.0
 Identities = 439/440 (99%), Gaps = 1/440 (0%)
 Strand = Plus / Minus

                                                                       
Query: 197 ataagctcaagggtgtccagttctatgttggaccactcctagactctcttgatttcatat 256
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 970 ataagctcaagggtgtccagttctatgt-ggaccactcctagactctcttgatttcatat 912

                                                                       
Query: 257 tgcttaaatttggtcaaactgttactagaatacatgttgtacatgttttcagttccatga 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tgcttaaatttggtcaaactgttactagaatacatgttgtacatgttttcagttccatga 852

                                                                       
Query: 317 catttgactctggcatcattaacatagagaatttatgtctcgttgtcttccaacttcatc 376
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 catttgactctggcatcattaacatagagaatttatgtctcgttgtcttccaacttcatc 792

                                                                       
Query: 377 atgcttttagtgatattgcgtgtgaaaagttgaacaaccatcctactatggctattgatg 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atgcttttagtgatattgcgtgtgaaaagttgaacaaccatcctactatggctattgatg 732

                                                                       
Query: 437 cggcctcaagtggttacaagcaagcatttgaattcacacatgaagtctctgcttgtatag 496
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cggcctcaagtggttacaagcaagcatttgaattcacacatgaagtctctgcttgtatag 672

                                                                       
Query: 497 tatctgttgcgaactcttctatgtttccccagtacagggcctcaacagaaaaacaagcat 556
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tatctgttgcgaactcttctatgtttccccagtacagggcctcaacagaaaaacaagcat 612

                                                                       
Query: 557 tggttagaaacaacagtaattttgcagactctacactacaacaaggctggttatcttaca 616
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggttagaaacaacagtaattttgcagactctacactacaacaaggctggttatcttaca 552

                               
Query: 617 aaggcattctattcagataa 636
           ||||||||||||||||||||
Sbjct: 551 aaggcattctattcagataa 532