Miyakogusa Predicted Gene

Lj4g3v1212370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1212370.1 tr|I1J9Q7|I1J9Q7_SOYBN Glutamate dehydrogenase
OS=Glycine max GN=Gma.50162 PE=3
SV=1,91.73,0,GLFDHDRGNASE,Glutamate/phenylalanine/leucine/valine
dehydrogenase; GLFV_DEHYDROGENASE,Glutamate/phen,CUFF.48636.1
         (411 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   751   0.0  
AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   751   0.0  
AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6...   711   0.0  
AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1...   704   0.0  
AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   537   e-153
AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protei...   133   2e-31

>AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/411 (87%), Positives = 384/411 (93%)

Query: 1   MNALAATNRNFQRAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60
           MNALAATNRNF+ A+RILGLDSK+E+SL+IPFREIKVECTIPKDDGTLVSY+GFRVQHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPRDLSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGC+PRDLS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGIQRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIGI  DVPAPDMGTN+QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVVFATEALFAEYGKSISDKTFVIQGFGNVGTWAAKAIHDRGGKVVAVSDITG 240
           REAATG GVVFATEAL AEYGKSI   TFVIQGFGNVGTWAAK IH++GGKVVAVSDITG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIRNPNGIDIPALLKHKSDNPNLVEFPGADVMDPNDVLVHECDVLIPCALGGVLSKENAA 300
           AIRNP GIDI AL+KHK    +L +F G D M+ +++L+HECDVLIPCALGGVL+KENA 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300

Query: 301 DVKAKFIIEAANHPTDPEADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           DVKAKFI+EAANHPTDP+ADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNRELQKYMTNAFQDIKAMCKTHNCDLRMGAFTLGVNRVARATILRGWEA 411
           KVN ELQKYMT AF +IK MC TH+C+LRMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411


>AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/411 (87%), Positives = 384/411 (93%)

Query: 1   MNALAATNRNFQRAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60
           MNALAATNRNF+ A+RILGLDSK+E+SL+IPFREIKVECTIPKDDGTLVSY+GFRVQHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPRDLSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGC+PRDLS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGIQRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIGI  DVPAPDMGTN+QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVVFATEALFAEYGKSISDKTFVIQGFGNVGTWAAKAIHDRGGKVVAVSDITG 240
           REAATG GVVFATEAL AEYGKSI   TFVIQGFGNVGTWAAK IH++GGKVVAVSDITG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIRNPNGIDIPALLKHKSDNPNLVEFPGADVMDPNDVLVHECDVLIPCALGGVLSKENAA 300
           AIRNP GIDI AL+KHK    +L +F G D M+ +++L+HECDVLIPCALGGVL+KENA 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300

Query: 301 DVKAKFIIEAANHPTDPEADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           DVKAKFI+EAANHPTDP+ADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNRELQKYMTNAFQDIKAMCKTHNCDLRMGAFTLGVNRVARATILRGWEA 411
           KVN ELQKYMT AF +IK MC TH+C+LRMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411


>AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 |
           chr5:6006172-6008248 FORWARD LENGTH=411
          Length = 411

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/411 (81%), Positives = 376/411 (91%)

Query: 1   MNALAATNRNFQRAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60
           MNALAATNRNF+ AAR+LGLDSKLEKSLLIPFREIKVECTIPKDDGTL S+VGFRVQHDN
Sbjct: 1   MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPRDLSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P  LSISELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERL 120

Query: 121 TRVFTQKIHDLIGIQRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIGI  DVPAPDMGT  QTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVVFATEALFAEYGKSISDKTFVIQGFGNVGTWAAKAIHDRGGKVVAVSDITG 240
           R+AATG GV+F TEAL  E+GK+IS + FVIQGFGNVG+WAAK I ++GGK+VAVSDITG
Sbjct: 181 RDAATGRGVMFGTEALLNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITG 240

Query: 241 AIRNPNGIDIPALLKHKSDNPNLVEFPGADVMDPNDVLVHECDVLIPCALGGVLSKENAA 300
           AI+N +GIDIPALLKH  ++  +  F GAD +DPN +LV +CD+L+P ALGGV+++ENA 
Sbjct: 241 AIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENAN 300

Query: 301 DVKAKFIIEAANHPTDPEADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           ++KAKFIIEAANHPTDP+ADEILSKKGV+ILPDIYAN+GGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 EIKAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNRELQKYMTNAFQDIKAMCKTHNCDLRMGAFTLGVNRVARATILRGWEA 411
           KVN EL+ YMT +F+D+K MCKTH+CDLRMGAFTLGVNRVA+ATILRGW A
Sbjct: 361 KVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILRGWGA 411


>AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 |
           chr3:1006913-1008846 FORWARD LENGTH=411
          Length = 411

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/409 (80%), Positives = 372/409 (90%)

Query: 1   MNALAATNRNFQRAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60
           MNALAATNRNF+ A+R+LGLDSKLEKSLLIPFREIKVECTIPKDDGTL S+VGFRVQHDN
Sbjct: 1   MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPRDLSISELERL 120
           ARGPMKGGIRYHPEV+PDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSELSLSELERL 120

Query: 121 TRVFTQKIHDLIGIQRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIGI  DVPAPDMGT  QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVVFATEALFAEYGKSISDKTFVIQGFGNVGTWAAKAIHDRGGKVVAVSDITG 240
           R+AATG GV+FATEAL  E+GK+IS + F IQGFGNVG+WAAK I D+GGK+VAVSD+TG
Sbjct: 181 RDAATGRGVLFATEALLNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTG 240

Query: 241 AIRNPNGIDIPALLKHKSDNPNLVEFPGADVMDPNDVLVHECDVLIPCALGGVLSKENAA 300
           AI+N NGIDI +LL+H  +N  +  F GAD +DP+ +LV +CD+L+P ALGGV+++ENA 
Sbjct: 241 AIKNNNGIDILSLLEHAEENRGIKGFDGADSIDPDSILVEDCDILVPAALGGVINRENAN 300

Query: 301 DVKAKFIIEAANHPTDPEADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           ++KAKFIIE ANHPTDPEADEIL KKGV+ILPDIYAN+GGVTVSYFEWVQNIQGFMWDEE
Sbjct: 301 EIKAKFIIEGANHPTDPEADEILKKKGVMILPDIYANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 361 KVNRELQKYMTNAFQDIKAMCKTHNCDLRMGAFTLGVNRVARATILRGW 409
           KVNREL+ YMT  F+D+K MC+TH+CDLRMGAFTLG+NRVA+AT +RGW
Sbjct: 361 KVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIRGW 409


>AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2357546 FORWARD LENGTH=309
          Length = 309

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/297 (86%), Positives = 276/297 (92%)

Query: 1   MNALAATNRNFQRAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDN 60
           MNALAATNRNF+ A+RILGLDSK+E+SL+IPFREIKVECTIPKDDGTLVSY+GFRVQHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPRDLSISELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGC+PRDLS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGIQRDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIGI  DVPAPDMGTN+QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVVFATEALFAEYGKSISDKTFVIQGFGNVGTWAAKAIHDRGGKVVAVSDITG 240
           REAATG GVVFATEAL AEYGKSI   TFVIQGFGNVGTWAAK IH++GGKVVAVSDITG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIRNPNGIDIPALLKHKSDNPNLVEFPGADVMDPNDVLVHECDVLIPCALGGVLSKE 297
           AIRNP GIDI AL+KHK    +L +F G D M+ +++L+HECDVLIPCALGGVL+K 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKS 297


>AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr1:19181741-19186297 FORWARD LENGTH=637
          Length = 637

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 10/360 (2%)

Query: 26  KSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQ 85
           + LL P R I        D G      GFRVQ + A GP +GGIR+HP ++      L  
Sbjct: 237 ERLLEPERMIVFRVPWIDDRGETHVNRGFRVQFNQALGPCRGGIRFHPSMNLSIAKFLGF 296

Query: 86  LMTWKTAVADIPYGGAKGGIGCNPRDLSISELERLTRVFTQKIHDLIGIQRDVPAPDMGT 145
             T K A++    GGA GG   +P+  S +E+ R  + F  +++  +G  +D+P+ ++G 
Sbjct: 297 QQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGPDKDLPSEEVGV 356

Query: 146 NSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVVFATEALFAEYGKSIS 205
            ++ M ++  +Y +  G      TG  I    S  R  A+G GVV+    + A+  K I 
Sbjct: 357 GTREMGYLFGQYRRLAGQFQGSFTGPRIYWAASSLRTEASGYGVVYFARLILADMNKEIK 416

Query: 206 DKTFVIQGFGNVGTWAAKAIHDRGGKVVAVSDITGAIRNPNGID---IPALLKHKSDNPN 262
               V+ G G +     + +   G   V VSD  G + + +G D   +  L   KS   +
Sbjct: 417 GLRCVVSGCGKIAMHVVEKLIACGAHPVTVSDSKGYLVDDDGFDYMKLAFLRDIKSQQRS 476

Query: 263 LVEFPG----ADVMDPNDVLVHECDVLIPCALGGVLSKENAADV---KAKFIIEAANHPT 315
           L ++      A   D        CDV  PCA    + + +A ++     + ++E +N P 
Sbjct: 477 LRDYSKTYARAKYFDELKPWNERCDVAFPCASQNEVDQADAINLVNAGCRLLVEGSNMPC 536

Query: 316 DPEADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWDEEKVNRELQKYMTNAFQ 375
             EA ++  K  V+I P I A AGGV     E ++      W  E     LQ+ +   ++
Sbjct: 537 TAEAVDVFRKANVLIAPAIAAGAGGVAAGEIEVLRESNSMQWSAEDFESRLQEALKQTYE 596