Miyakogusa Predicted Gene

Lj4g3v1202180.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1202180.2 Non Chatacterized Hit- tr|E1ZQA3|E1ZQA3_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,32.29,9e-19,seg,NULL; coiled-coil,NULL; DUF2052,Protein of
unknown function DUF2052, coiled-coil,CUFF.48631.2
         (326 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g05610.1                                                       381   e-106
Glyma17g15920.1                                                        87   3e-17

>Glyma05g05610.1 
          Length = 317

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/325 (60%), Positives = 218/325 (67%), Gaps = 13/325 (4%)

Query: 2   EEVKKKMNDEAVERITERLSSLDNLYFPRAVQSTTTLPSQRKTXXXXXXXXXXXXXXERY 61
           E V   M+DEA ERI+ERLS L+NLYFPRA++ST TLPSQRK               ERY
Sbjct: 6   ETVTTTMSDEAKERISERLSCLENLYFPRALESTVTLPSQRKAIFRDLLSRDVALFLERY 65

Query: 62  GSELTCTELGDFDSMTDDYEVNWHVTRLRSAMSPTAEELXXXXXXXXXXXXAYLDRLVMG 121
           GS+LTC+EL +FDSM DDYE+NWH+ RLRS MSPT+EEL            AYLD+LV  
Sbjct: 66  GSKLTCSELSEFDSMKDDYEINWHIKRLRSIMSPTSEELRMRSVTVKNRRRAYLDKLVCQ 125

Query: 122 GRYFSEEAMREREPYLHHEYVGRFQDQSGRGMARPGERWSETLLRRCEEAELVAKIRGEQ 181
           G YFSEEAMREREPYLHHEYVGRFQDQSGR MARPGERWSETL+RRCEEA LVAKIRGEQ
Sbjct: 126 GHYFSEEAMREREPYLHHEYVGRFQDQSGRRMARPGERWSETLMRRCEEAALVAKIRGEQ 185

Query: 182 QRMGVAERDWVGNEGFQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXGERTSGGVTALPVE 241
           QRMGV ERDWVGNE FQ++                            ER        PVE
Sbjct: 186 QRMGVPERDWVGNERFQEEEEEEEEEEEEEEEEKEEEVVLDE-----ERRRISSNGQPVE 240

Query: 242 RDMNQPDVTDNAPXXXXXXXXXXXXXXXXXXDRMNQFAYIMQQKFLLGEDHEYLDYAKID 301
           R +N+ D T  +                   DRMNQF YIMQQKFLLGEDHE+ DY+KID
Sbjct: 241 RHLNEADPTKVS--------EEPTLSAEELEDRMNQFTYIMQQKFLLGEDHEHQDYSKID 292

Query: 302 NDETLDDHWQREANIDAEERYFADD 326
           NDETLDDHWQREANIDAEERYFADD
Sbjct: 293 NDETLDDHWQREANIDAEERYFADD 317


>Glyma17g15920.1 
          Length = 223

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 46/67 (68%)

Query: 76  MTDDYEVNWHVTRLRSAMSPTAEELXXXXXXXXXXXXAYLDRLVMGGRYFSEEAMREREP 135
           M D YEVNWHV RLRS +SPT+EEL            A LD+L+  G YFSE+AMREREP
Sbjct: 1   MKDGYEVNWHVKRLRSIISPTSEELRMRPVTVKNRRRACLDKLLCQGHYFSEDAMREREP 60

Query: 136 YLHHEYV 142
           YLHHEY 
Sbjct: 61  YLHHEYT 67



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 273 DRMNQFAYIMQQKFLLGEDHEYLDYAKIDNDETLDD 308
           DRMNQF YIMQQKFLLG+DHE+LDY KIDNDE LDD
Sbjct: 173 DRMNQFTYIMQQKFLLGKDHEHLDYTKIDNDEALDD 208