Miyakogusa Predicted Gene

Lj4g3v1202180.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1202180.2 Non Characterized Hit- tr|E1ZQA3|E1ZQA3_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,32.29,9e-19,seg,NULL; coiled-coil,NULL; DUF2052,Protein of
unknown function DUF2052, coiled-coil,CUFF.48631.2
         (326 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g099190.3 | plant/K14A3-4 protein | HC | chr4:41098251-410...   342   3e-94
Medtr4g099190.1 | plant/K14A3-4 protein | HC | chr4:41098230-410...   341   7e-94
Medtr4g099190.2 | plant/K14A3-4 protein | HC | chr4:41098251-410...   253   1e-67

>Medtr4g099190.3 | plant/K14A3-4 protein | HC |
           chr4:41098251-41093493 | 20130731
          Length = 327

 Score =  342 bits (877), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/329 (54%), Positives = 216/329 (65%), Gaps = 8/329 (2%)

Query: 3   EVKKKMND---EAVERITERLSSLDNLYFPRAVQSTTTLPSQRKTXXXXXXXXXXXXXXE 59
           EVK+K N+   EA E+I+ERLS+++NL+FPRA QST TLPSQRK+              E
Sbjct: 2   EVKQKKNEVSEEAKEKISERLSNVENLWFPRAQQSTATLPSQRKSIFHSLLTRDPSLFLE 61

Query: 60  RYGSELTCTELGDFDSMTDDYEVNWHVTRLRSAMSPTAEELXXXXXXXXXXXXAYLDRLV 119
           RYGS LT TEL +F+++ +DYE+NWH+TRLRS ++PT EEL            AYLDRL+
Sbjct: 62  RYGSNLTSTELTEFETLKEDYEINWHLTRLRSVLTPTTEELRRKAVVAKNRRRAYLDRLI 121

Query: 120 MGGRYFSEEAMREREPYLHHEYVGRFQDQSGRGMARPGERWSETLLRRCEEAELVAKIRG 179
           +GG YFSEEAMRERE YLH+EYVG+FQD+ GR MARPGERWS+TLLRRCEEA +VAKIRG
Sbjct: 122 VGGVYFSEEAMREREAYLHYEYVGKFQDRFGRRMARPGERWSDTLLRRCEEAVIVAKIRG 181

Query: 180 EQQRMGVAERDWVGNEGFQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXGER--TSGGVTA 237
           EQ+R+GV   +W+GNEG Q++                             +   S   T+
Sbjct: 182 EQERIGVPRSEWIGNEGLQEEEEEEEEEEEEEEEDDDDVEKDETVEIHVPQPDVSDNGTS 241

Query: 238 LPVERDMNQPDVTDNAPXXXXXXXXXXXXXXXXXXDRMNQFAYIMQQKFLLGEDHEYLDY 297
            P      + DVT+N                    DRMNQF YIMQQKFLLGEDHE++DY
Sbjct: 242 DPARM---RHDVTNNGTSDPARARQDPTLSSEELEDRMNQFTYIMQQKFLLGEDHEHVDY 298

Query: 298 AKIDNDETLDDHWQREANIDAEERYFADD 326
            KIDNDETLDDHWQREANIDAEERYFADD
Sbjct: 299 TKIDNDETLDDHWQREANIDAEERYFADD 327


>Medtr4g099190.1 | plant/K14A3-4 protein | HC |
           chr4:41098230-41093551 | 20130731
          Length = 328

 Score =  341 bits (874), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 179/330 (54%), Positives = 215/330 (65%), Gaps = 9/330 (2%)

Query: 3   EVKKKMND---EAVERITERLSSLDNLYFPRAVQSTTTLPSQRKTXXXXXXXXXXXXXXE 59
           EVK+K N+   EA E+I+ERLS+++NL+FPRA QST TLPSQRK+              E
Sbjct: 2   EVKQKKNEVSEEAKEKISERLSNVENLWFPRAQQSTATLPSQRKSIFHSLLTRDPSLFLE 61

Query: 60  RYGSELTCTELGDFDSMTDDYEVNWHVTRLRSAMSPTAEELXXXXXXXXXXXXAYLDRLV 119
           RYGS LT TEL +F+++ +DYE+NWH+TRLRS ++PT EEL            AYLDRL+
Sbjct: 62  RYGSNLTSTELTEFETLKEDYEINWHLTRLRSVLTPTTEELRRKAVVAKNRRRAYLDRLI 121

Query: 120 MGGRYFSEEAMREREPYLHHEYVGRFQDQSGRGMARPGERWSETLLRRCEEAELVAKIRG 179
           +GG YFSEEAMRERE YLH+EYVG+FQD+ GR MARPGERWS+TLLRRCEEA +VAKIRG
Sbjct: 122 VGGVYFSEEAMREREAYLHYEYVGKFQDRFGRRMARPGERWSDTLLRRCEEAVIVAKIRG 181

Query: 180 EQQRMGVAERDWVGNEGFQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXG---ERTSGGVT 236
           EQ+R+GV   +W+GNEG Q++                                  S   T
Sbjct: 182 EQERIGVPRSEWIGNEGLQEEEEEEEEEEEEEEEDDDDVEKDETVEQIHVPQPDVSDNGT 241

Query: 237 ALPVERDMNQPDVTDNAPXXXXXXXXXXXXXXXXXXDRMNQFAYIMQQKFLLGEDHEYLD 296
           + P      + DVT+N                    DRMNQF YIMQQKFLLGEDHE++D
Sbjct: 242 SDPARM---RHDVTNNGTSDPARARQDPTLSSEELEDRMNQFTYIMQQKFLLGEDHEHVD 298

Query: 297 YAKIDNDETLDDHWQREANIDAEERYFADD 326
           Y KIDNDETLDDHWQREANIDAEERYFADD
Sbjct: 299 YTKIDNDETLDDHWQREANIDAEERYFADD 328


>Medtr4g099190.2 | plant/K14A3-4 protein | HC |
           chr4:41098251-41093510 | 20130731
          Length = 242

 Score =  253 bits (647), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 122/199 (61%), Positives = 151/199 (75%), Gaps = 3/199 (1%)

Query: 3   EVKKKMND---EAVERITERLSSLDNLYFPRAVQSTTTLPSQRKTXXXXXXXXXXXXXXE 59
           EVK+K N+   EA E+I+ERLS+++NL+FPRA QST TLPSQRK+              E
Sbjct: 2   EVKQKKNEVSEEAKEKISERLSNVENLWFPRAQQSTATLPSQRKSIFHSLLTRDPSLFLE 61

Query: 60  RYGSELTCTELGDFDSMTDDYEVNWHVTRLRSAMSPTAEELXXXXXXXXXXXXAYLDRLV 119
           RYGS LT TEL +F+++ +DYE+NWH+TRLRS ++PT EEL            AYLDRL+
Sbjct: 62  RYGSNLTSTELTEFETLKEDYEINWHLTRLRSVLTPTTEELRRKAVVAKNRRRAYLDRLI 121

Query: 120 MGGRYFSEEAMREREPYLHHEYVGRFQDQSGRGMARPGERWSETLLRRCEEAELVAKIRG 179
           +GG YFSEEAMRERE YLH+EYVG+FQD+ GR MARPGERWS+TLLRRCEEA +VAKIRG
Sbjct: 122 VGGVYFSEEAMREREAYLHYEYVGKFQDRFGRRMARPGERWSDTLLRRCEEAVIVAKIRG 181

Query: 180 EQQRMGVAERDWVGNEGFQ 198
           EQ+R+GV   +W+GNEG Q
Sbjct: 182 EQERIGVPRSEWIGNEGLQ 200