Miyakogusa Predicted Gene

Lj4g3v1202180.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v1202180.2 Non Chatacterized Hit- tr|E1ZQA3|E1ZQA3_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,32.29,9e-19,seg,NULL; coiled-coil,NULL; DUF2052,Protein of
unknown function DUF2052, coiled-coil,CUFF.48631.2
         (981 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73518 similar to UniRef100_A7PCI3 Cluster: Chromosome...  1102   0.0  
gnl|LJGI|AV766929 weakly similar to UniRef100_A7PCI3 Cluster: Ch...   494   e-139

>gnl|LJGI|TC73518 similar to UniRef100_A7PCI3 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (57%)
          Length = 595

 Score = 1102 bits (556), Expect = 0.0
 Identities = 556/556 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggaggtgaagaagaagatgaatgacgaagcggtggagagaatcacagagagactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39  atggaggaggtgaagaagaagatgaatgacgaagcggtggagagaatcacagagagactc 98

                                                                       
Query: 61  tcatctttagacaatctctatttcccacgcgccgtccaatccaccaccactctcccctca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  tcatctttagacaatctctatttcccacgcgccgtccaatccaccaccactctcccctca 158

                                                                       
Query: 121 cagcgcaagacgctcctccgcgacctcctctcccgcgacgccgcgctcttcctcgaacgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cagcgcaagacgctcctccgcgacctcctctcccgcgacgccgcgctcttcctcgaacgc 218

                                                                       
Query: 181 tacggttccgaactcacgtgcacggagctgggcgatttcgattcgatgacggacgattac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tacggttccgaactcacgtgcacggagctgggcgatttcgattcgatgacggacgattac 278

                                                                       
Query: 241 gaggtgaattggcacgtgacgcggctgcggagcgcgatgagtccgacggcggaggagctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaggtgaattggcacgtgacgcggctgcggagcgcgatgagtccgacggcggaggagctg 338

                                                                       
Query: 301 aggaggaccaaggtgagggtgaagaaccggcggcgtgcttacctggataggttggtgatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aggaggaccaaggtgagggtgaagaaccggcggcgtgcttacctggataggttggtgatg 398

                                                                       
Query: 361 ggtgggcggtacttctccgaggaggcgatgagggagagggagccttacttgcatcatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtgggcggtacttctccgaggaggcgatgagggagagggagccttacttgcatcatgag 458

                                                                       
Query: 421 tatgtggggaggtttcaggatcagagtgggaggggtatggcgaggcccggggagcggtgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tatgtggggaggtttcaggatcagagtgggaggggtatggcgaggcccggggagcggtgg 518

                                                                       
Query: 481 tcggagacgctgttgagacggtgtgaggaggcggagctggtggctaagattagaggggag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tcggagacgctgttgagacggtgtgaggaggcggagctggtggctaagattagaggggag 578

                           
Query: 541 cagcagaggatggggg 556
           ||||||||||||||||
Sbjct: 579 cagcagaggatggggg 594


>gnl|LJGI|AV766929 weakly similar to UniRef100_A7PCI3 Cluster: Chromosome chr2
           scaffold_11, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_11, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (20%)
          Length = 411

 Score =  494 bits (249), Expect = e-139
 Identities = 249/249 (100%)
 Strand = Plus / Minus

                                                                       
Query: 733 aatcagccagatgtaactgataatgccccatctggttcagctagcgagagtcaggaatca 792
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aatcagccagatgtaactgataatgccccatctggttcagctagcgagagtcaggaatca 352

                                                                       
Query: 793 actttatcttcagaagagctggaggaccggatgaatcaattcgcgtacattatgcagcag 852
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 actttatcttcagaagagctggaggaccggatgaatcaattcgcgtacattatgcagcag 292

                                                                       
Query: 853 aagtttctattaggggaagaccatgaatacctagattacgctaaaatagataatgatgag 912
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aagtttctattaggggaagaccatgaatacctagattacgctaaaatagataatgatgag 232

                                                                       
Query: 913 acccttgacgatcattggcagagggaggccaatattgatgctgaagagagatattttgct 972
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acccttgacgatcattggcagagggaggccaatattgatgctgaagagagatattttgct 172

                    
Query: 973 gatgattaa 981
           |||||||||
Sbjct: 171 gatgattaa 163