Miyakogusa Predicted Gene

Lj4g3v1154460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1154460.1 Non Chatacterized Hit- tr|I3SIX7|I3SIX7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; TETRASPANIN,NULL;
Tetraspannin,Tetraspanin/Peripherin,CUFF.48589.1
         (282 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32400.3 | Symbols: TOM2A | tobamovirus multiplication 2A | c...   353   7e-98
AT1G32400.2 | Symbols: TOM2A | tobamovirus multiplication 2A | c...   353   7e-98
AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A | c...   353   7e-98
AT4G28770.2 | Symbols:  | Tetraspanin family protein | chr4:1421...   110   9e-25
AT4G28770.1 | Symbols:  | Tetraspanin family protein | chr4:1421...   110   1e-24
AT2G20230.1 | Symbols:  | Tetraspanin family protein | chr2:8725...   105   3e-23
AT2G20740.2 | Symbols:  | Tetraspanin family protein | chr2:8935...   104   5e-23
AT2G20740.1 | Symbols:  | Tetraspanin family protein | chr2:8935...   104   6e-23
AT2G20740.3 | Symbols:  | Tetraspanin family protein | chr2:8936...    65   8e-11

>AT1G32400.3 | Symbols: TOM2A | tobamovirus multiplication 2A |
           chr1:11689393-11690873 REVERSE LENGTH=280
          Length = 280

 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 175/279 (62%), Positives = 209/279 (74%)

Query: 4   ACRGCWECXXXXXXXXXXXXXXAMVGYGIYLLVEFSKASDNTLSVSTVSDDQTLVQLGRP 63
           ACRGC EC               M+GYGIYL VE+ + +DN+++    + DQ+ V  GRP
Sbjct: 2   ACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRP 61

Query: 64  MLMAVSLSNSFFDDLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXX 123
           +LMAVSLS++ FD+LPKAWFIYLFIGIGV LFVISC GC+G  +RS CCLSC++      
Sbjct: 62  ILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILL 121

Query: 124 ILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVL 183
           IL ELG AAFIFFD SW+ E+P+D+TGNFD IY FLRENW IVRWVALG V+FEALLF+L
Sbjct: 122 ILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLL 181

Query: 184 ALIVRAANRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXTIDQRPSRNDAWSTR 243
           AL+VRAAN PA+YDSD+E++ PRQQ RQP +NR            T+DQRPSR+D WS R
Sbjct: 182 ALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSAR 241

Query: 244 MREKYGLDTSEFTYNPSESQRFQQVNSQPTEERSRCAIM 282
           MREKYGLDTSEFTYNPSES RFQQ+ +QP EE+ RC IM
Sbjct: 242 MREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280


>AT1G32400.2 | Symbols: TOM2A | tobamovirus multiplication 2A |
           chr1:11689393-11690873 REVERSE LENGTH=280
          Length = 280

 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 175/279 (62%), Positives = 209/279 (74%)

Query: 4   ACRGCWECXXXXXXXXXXXXXXAMVGYGIYLLVEFSKASDNTLSVSTVSDDQTLVQLGRP 63
           ACRGC EC               M+GYGIYL VE+ + +DN+++    + DQ+ V  GRP
Sbjct: 2   ACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRP 61

Query: 64  MLMAVSLSNSFFDDLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXX 123
           +LMAVSLS++ FD+LPKAWFIYLFIGIGV LFVISC GC+G  +RS CCLSC++      
Sbjct: 62  ILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILL 121

Query: 124 ILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVL 183
           IL ELG AAFIFFD SW+ E+P+D+TGNFD IY FLRENW IVRWVALG V+FEALLF+L
Sbjct: 122 ILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLL 181

Query: 184 ALIVRAANRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXTIDQRPSRNDAWSTR 243
           AL+VRAAN PA+YDSD+E++ PRQQ RQP +NR            T+DQRPSR+D WS R
Sbjct: 182 ALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSAR 241

Query: 244 MREKYGLDTSEFTYNPSESQRFQQVNSQPTEERSRCAIM 282
           MREKYGLDTSEFTYNPSES RFQQ+ +QP EE+ RC IM
Sbjct: 242 MREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280


>AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A |
           chr1:11689393-11690873 REVERSE LENGTH=280
          Length = 280

 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 175/279 (62%), Positives = 209/279 (74%)

Query: 4   ACRGCWECXXXXXXXXXXXXXXAMVGYGIYLLVEFSKASDNTLSVSTVSDDQTLVQLGRP 63
           ACRGC EC               M+GYGIYL VE+ + +DN+++    + DQ+ V  GRP
Sbjct: 2   ACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRP 61

Query: 64  MLMAVSLSNSFFDDLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXX 123
           +LMAVSLS++ FD+LPKAWFIYLFIGIGV LFVISC GC+G  +RS CCLSC++      
Sbjct: 62  ILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILL 121

Query: 124 ILAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVL 183
           IL ELG AAFIFFD SW+ E+P+D+TGNFD IY FLRENW IVRWVALG V+FEALLF+L
Sbjct: 122 ILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLL 181

Query: 184 ALIVRAANRPADYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXTIDQRPSRNDAWSTR 243
           AL+VRAAN PA+YDSD+E++ PRQQ RQP +NR            T+DQRPSR+D WS R
Sbjct: 182 ALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSAR 241

Query: 244 MREKYGLDTSEFTYNPSESQRFQQVNSQPTEERSRCAIM 282
           MREKYGLDTSEFTYNPSES RFQQ+ +QP EE+ RC IM
Sbjct: 242 MREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280


>AT4G28770.2 | Symbols:  | Tetraspanin family protein |
           chr4:14212177-14213896 REVERSE LENGTH=325
          Length = 325

 Score =  110 bits (276), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 12/186 (6%)

Query: 77  DLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXXILAELGCAAFIFF 136
           DLP  WFIY F+ IG+++ +++  G I A   +GCCL  ++      I+ E     FI  
Sbjct: 149 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 208

Query: 137 DKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVLALIVRA--ANRPA 194
           D+ W+K++P D TG  + +  F+ EN +I +WV + +V  + L  +LAL++RA  + R +
Sbjct: 209 DRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQS 268

Query: 195 DYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXTIDQRPSRNDAWSTRMREKYGLDTSE 254
           + D +++F NP  +AR  LL                    S  D W +R+REKYGL  S+
Sbjct: 269 ELDDEDDFENPMSRARDNLLGPQANQT---------SSGSSNIDNWRSRIREKYGLINSQ 319

Query: 255 FTYNPS 260
            ++ PS
Sbjct: 320 -SHTPS 324


>AT4G28770.1 | Symbols:  | Tetraspanin family protein |
           chr4:14212177-14213518 REVERSE LENGTH=281
          Length = 281

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 12/186 (6%)

Query: 77  DLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXXILAELGCAAFIFF 136
           DLP  WFIY F+ IG+++ +++  G I A   +GCCL  ++      I+ E     FI  
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 164

Query: 137 DKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVLALIVRA--ANRPA 194
           D+ W+K++P D TG  + +  F+ EN +I +WV + +V  + L  +LAL++RA  + R +
Sbjct: 165 DRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQS 224

Query: 195 DYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXTIDQRPSRNDAWSTRMREKYGLDTSE 254
           + D +++F NP  +AR  LL                    S  D W +R+REKYGL  S+
Sbjct: 225 ELDDEDDFENPMSRARDNLLGPQANQTSSGS---------SNIDNWRSRIREKYGLINSQ 275

Query: 255 FTYNPS 260
            ++ PS
Sbjct: 276 -SHTPS 280


>AT2G20230.1 | Symbols:  | Tetraspanin family protein |
           chr2:8725762-8727388 FORWARD LENGTH=270
          Length = 270

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 17/182 (9%)

Query: 77  DLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXXILAELGCAAFIFF 136
           DLP  WFIY F+ +G+++ +++  G I A   +GCCL  ++      IL E    A+I  
Sbjct: 94  DLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAI 153

Query: 137 DKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVLALIVRA--ANRPA 194
           D+ W+K++P D TG    +  F+ EN +I +WV + +V  + L  +LA+++RA  +    
Sbjct: 154 DRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKP 213

Query: 195 DYDSDEEFINPRQQARQPLLNRXXXXXXXXXXXXTIDQRP---SRNDAWSTRMREKYGLD 251
           + D +E+  NPR +   PLL                +Q P   S+ + WS+R+REKYGL+
Sbjct: 214 ELDEEEDDENPRSRTWDPLLGPQG------------NQAPAGSSKIENWSSRIREKYGLN 261

Query: 252 TS 253
            S
Sbjct: 262 QS 263


>AT2G20740.2 | Symbols:  | Tetraspanin family protein |
           chr2:8935911-8937292 FORWARD LENGTH=180
          Length = 180

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 6/142 (4%)

Query: 77  DLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXXILAELGCAAFIFF 136
           D P  WFIY F+G+G +L V++C G I A T +GCCL  +        + E G  A IF 
Sbjct: 10  DHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFL 69

Query: 137 DKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVLALIVRA--ANRPA 194
           ++ WKK+ P D +G F    +F+  N+ I +W+ L IV  + L  ++A++++A   +   
Sbjct: 70  NRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHR 129

Query: 195 DYDSDEEF----INPRQQARQP 212
            YDSD+E+    +   Q ARQP
Sbjct: 130 HYDSDDEYNVSTVALLQDARQP 151


>AT2G20740.1 | Symbols:  | Tetraspanin family protein |
           chr2:8935788-8937292 FORWARD LENGTH=221
          Length = 221

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 6/142 (4%)

Query: 77  DLPKAWFIYLFIGIGVVLFVISCFGCIGAMTRSGCCLSCFAXXXXXXILAELGCAAFIFF 136
           D P  WFIY F+G+G +L V++C G I A T +GCCL  +        + E G  A IF 
Sbjct: 51  DHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFL 110

Query: 137 DKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVLALIVRA--ANRPA 194
           ++ WKK+ P D +G F    +F+  N+ I +W+ L IV  + L  ++A++++A   +   
Sbjct: 111 NRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHR 170

Query: 195 DYDSDEEF----INPRQQARQP 212
            YDSD+E+    +   Q ARQP
Sbjct: 171 HYDSDDEYNVSTVALLQDARQP 192


>AT2G20740.3 | Symbols:  | Tetraspanin family protein |
           chr2:8936713-8937292 FORWARD LENGTH=131
          Length = 131

 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 6/94 (6%)

Query: 125 LAELGCAAFIFFDKSWKKEIPTDKTGNFDMIYEFLRENWNIVRWVALGIVIFEALLFVLA 184
           + E G  A IF ++ WKK+ P D +G F    +F+  N+ I +W+ L IV  + L  ++A
Sbjct: 9   MVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIA 68

Query: 185 LIVRA--ANRPADYDSDEEF----INPRQQARQP 212
           ++++A   +    YDSD+E+    +   Q ARQP
Sbjct: 69  MLLKALGPHPHRHYDSDDEYNVSTVALLQDARQP 102