Miyakogusa Predicted Gene

Lj4g3v0998910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0998910.1 Non Chatacterized Hit- tr|K3XRI8|K3XRI8_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,47.54,0.000000005,seg,NULL,CUFF.48257.1
         (364 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g05950.1                                                       633   0.0  
Glyma16g24650.1                                                       282   5e-76
Glyma10g26280.1                                                       230   2e-60
Glyma06g39880.1                                                       179   5e-45

>Glyma02g05950.1 
          Length = 405

 Score =  633 bits (1633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/346 (86%), Positives = 320/346 (92%), Gaps = 1/346 (0%)

Query: 19  PWIASISMPTSNCYAFDNSSRIVDFSSWIGYLWEYDDVKEGSDLVIRFCKDVERRSQTGY 78
           PW+AS+SMPTSNCYAFDNSSRIVDFS W GYL+EYD  K+GSDL +RFCKDVE RSQTGY
Sbjct: 19  PWVASVSMPTSNCYAFDNSSRIVDFSGWTGYLFEYDQ-KQGSDLSVRFCKDVESRSQTGY 77

Query: 79  VDFGRFDRFNYFVAGSGQSDFVQEFYNGDLMGCEQTFDKMGRTAQVNIICGSCLNGQCKG 138
           VDFGRFDRFNYFVAGSGQSDFVQEFYNGDLMGCEQ++DKMGRTAQVNIICG CLNGQCKG
Sbjct: 78  VDFGRFDRFNYFVAGSGQSDFVQEFYNGDLMGCEQSYDKMGRTAQVNIICGKCLNGQCKG 137

Query: 139 RPGCICNVTYESKCRVLVELAIPCEKPGPLVFQGFTVGFHPRSWELVNNGMTQFGFEKTH 198
           RPGCICNVT ES CRVLV+LAIPC+KPGP VFQGFTVGFHPRSWELV NGMTQ GFEK H
Sbjct: 138 RPGCICNVTNESNCRVLVDLAIPCDKPGPPVFQGFTVGFHPRSWELVYNGMTQIGFEKPH 197

Query: 199 HEFSFQTGQTHAVLFMTAVASLSSLVQKPILEVIPPKGLEVRLSGSAASGKPPTTLSPTM 258
           H+FSF TGQT  VLFMTAVASLSSLV KP L+V+P KGLEV LSGSAA GKPPTTLSP+M
Sbjct: 198 HDFSFHTGQTQVVLFMTAVASLSSLVHKPSLKVLPDKGLEVGLSGSAAKGKPPTTLSPSM 257

Query: 259 LIIDWRCEVARDTPYEVNITIPVEGYEPIQFVLTKMCDYKQNPGGGTTRGWAIFGVLSCI 318
           LI+DWRCEVAR+TPYEVNITIPVEGYEPI+FVLTK CDYKQ+PGGG TRGWAIFGVLSCI
Sbjct: 258 LIVDWRCEVARNTPYEVNITIPVEGYEPIEFVLTKTCDYKQDPGGGRTRGWAIFGVLSCI 317

Query: 319 FLVSSTIFCCGGFIYKTKVERQRGIDALPGMTILSACLETIGGAAQ 364
           F VSST+FCCGGFIYKTKVERQRGIDALPGMTILSACLET+ GA Q
Sbjct: 318 FFVSSTLFCCGGFIYKTKVERQRGIDALPGMTILSACLETVSGAGQ 363


>Glyma16g24650.1 
          Length = 327

 Score =  282 bits (721), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 147/200 (73%), Positives = 160/200 (80%), Gaps = 6/200 (3%)

Query: 165 PGPLVFQGFTVGFHPRSWE---LVNNGMTQFGFEKTHHEFSFQTGQTHAVLFMTAVASLS 221
           P PLV Q    G   R W    L N   T  G+  T  + +F TGQT  VL MTAVASLS
Sbjct: 121 PDPLVSQPEKQG-RERWWVQILLTNKLTTNIGW--TFRKKNFHTGQTRVVLSMTAVASLS 177

Query: 222 SLVQKPILEVIPPKGLEVRLSGSAASGKPPTTLSPTMLIIDWRCEVARDTPYEVNITIPV 281
           SLVQKP  +V+P KGLEV LSGSA  GK PTTLSP+MLI+DWRCEVAR+TPYEVNITIPV
Sbjct: 178 SLVQKPSSKVLPDKGLEVGLSGSAGEGKLPTTLSPSMLIVDWRCEVARNTPYEVNITIPV 237

Query: 282 EGYEPIQFVLTKMCDYKQNPGGGTTRGWAIFGVLSCIFLVSSTIFCCGGFIYKTKVERQR 341
           EGYEPI+FVLTK+CDYKQ+PGGG TRGWAIFGVLSCIF VSST+FCCGGFIYKTKVERQR
Sbjct: 238 EGYEPIEFVLTKICDYKQDPGGGRTRGWAIFGVLSCIFFVSSTLFCCGGFIYKTKVERQR 297

Query: 342 GIDALPGMTILSACLETIGG 361
           GIDALPGMTILSACLET+  
Sbjct: 298 GIDALPGMTILSACLETVSS 317


>Glyma10g26280.1 
          Length = 137

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/137 (80%), Positives = 120/137 (87%)

Query: 153 RVLVELAIPCEKPGPLVFQGFTVGFHPRSWELVNNGMTQFGFEKTHHEFSFQTGQTHAVL 212
           RVLV+LAIPC++ GP VFQG TVGFHPRSWELV NGMTQ GFEK HH+FSF  GQT  VL
Sbjct: 1   RVLVDLAIPCDRLGPPVFQGITVGFHPRSWELVYNGMTQIGFEKPHHDFSFHIGQTQVVL 60

Query: 213 FMTAVASLSSLVQKPILEVIPPKGLEVRLSGSAASGKPPTTLSPTMLIIDWRCEVARDTP 272
           FMTAVASLSSLVQKP L+V+P KGLEV LSGSAA GKPP  LSP+MLI+DWRCEV R+TP
Sbjct: 61  FMTAVASLSSLVQKPSLKVLPDKGLEVGLSGSAAKGKPPIMLSPSMLIVDWRCEVVRNTP 120

Query: 273 YEVNITIPVEGYEPIQF 289
           YEVNITIPVEGYEPI+F
Sbjct: 121 YEVNITIPVEGYEPIEF 137


>Glyma06g39880.1 
          Length = 213

 Score =  179 bits (453), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 98/154 (63%), Positives = 110/154 (71%), Gaps = 11/154 (7%)

Query: 154 VLVELAIPCEKPGPLVFQGFTVGFHPRSWELVNNGMTQFGFEKTHHEFSFQTGQTHAVLF 213
           VL ++AIPC+K GP +FQGFTVGF   SWELV NGMTQ GFEK      F T        
Sbjct: 1   VLADVAIPCDKLGPPLFQGFTVGFCQGSWELVYNGMTQNGFEKPTKVLFFTT-------L 53

Query: 214 MTAVASLSSLVQKPILEVIPPKGLEVRLSGSAASGKPPTTLSPTMLIIDWRCEVARDTPY 273
           MT VASLS +V+   L+V+  KGLEVRLSGSAA GKPPTTL    L++DWRCEVAR+TPY
Sbjct: 54  MTTVASLSFVVENLGLKVLQNKGLEVRLSGSAAKGKPPTTL----LLVDWRCEVARNTPY 109

Query: 274 EVNITIPVEGYEPIQFVLTKMCDYKQNPGGGTTR 307
           EVNITIPVEGYEPI+FVLTK CD  Q   G T  
Sbjct: 110 EVNITIPVEGYEPIEFVLTKTCDRVQQIIGATNN 143