Miyakogusa Predicted Gene

Lj4g3v0998910.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0998910.1 Non Chatacterized Hit- tr|K3XRI8|K3XRI8_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,47.54,0.000000005,seg,NULL,CUFF.48257.1
         (1092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU251739 similar to UniRef100_A7QE61 Cluster: Chromosom...   644   0.0  

>gnl|LJGI|AU251739 similar to UniRef100_A7QE61 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 325

 Score =  644 bits (325), Expect = 0.0
 Identities = 325/325 (100%)
 Strand = Plus / Plus

                                                                       
Query: 355 ggacgaacagcacaggtaaatattatatgtgggagttgtttgaatggacaatgtaaaggg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggacgaacagcacaggtaaatattatatgtgggagttgtttgaatggacaatgtaaaggg 60

                                                                       
Query: 415 cgtcctggatgcatatgtaatgtgacatatgaatcaaaatgcagggttttagttgaactt 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgtcctggatgcatatgtaatgtgacatatgaatcaaaatgcagggttttagttgaactt 120

                                                                       
Query: 475 gcaattccatgtgagaaaccgggcccactagtatttcaaggtttcactgttggttttcat 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaattccatgtgagaaaccgggcccactagtatttcaaggtttcactgttggttttcat 180

                                                                       
Query: 535 ccacgatcatgggaacttgtgaataatggcatgactcaatttggttttgagaaaacccac 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacgatcatgggaacttgtgaataatggcatgactcaatttggttttgagaaaacccac 240

                                                                       
Query: 595 catgaatttagctttcagacaggacaaactcatgcagtcctgtttatgactgcagttgct 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catgaatttagctttcagacaggacaaactcatgcagtcctgtttatgactgcagttgct 300

                                    
Query: 655 tcactttcatccttggttcaaaagc 679
           |||||||||||||||||||||||||
Sbjct: 301 tcactttcatccttggttcaaaagc 325