Miyakogusa Predicted Gene
- Lj4g3v0959990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0959990.1 tr|D0ABH5|D0ABH5_9ORYZ
OO_Ba0013J05-OO_Ba0033A15.32 protein OS=Oryza officinalis
GN=OO_Ba0013J05-OO_,32.16,4e-18,seg,NULL; Gb3_synth,Alpha
1,4-glycosyltransferase domain; LACTOSYLCERAMIDE
4-ALPHA-GALACTOSYLTRANSFE,gene.g53578.t1.1
(1539 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76620 similar to UniRef100_Q2MGS1 Cluster: Glycosyltr... 987 0.0
gnl|LJGI|TC62705 similar to UniRef100_Q2MGS1 Cluster: Glycosyltr... 950 0.0
gnl|LJGI|AW164006 similar to UniRef100_Q2MGS1 Cluster: Glycosylt... 232 5e-60
>gnl|LJGI|TC76620 similar to UniRef100_Q2MGS1 Cluster: Glycosyltransferase
sugar-binding region containing DXD motif; Alpha
1,4-glycosyltransferase conserved region; n=1; Medicago
truncatula|Rep: Glycosyltransferase sugar-binding region
containing DXD motif; Alpha 1,4-glycosyltransferase
conserved region - Medicago truncatula (Barrel medic),
partial (31%)
Length = 955
Score = 987 bits (498), Expect = 0.0
Identities = 515/523 (98%)
Strand = Plus / Plus
Query: 1017 gtatggtggcatctatctagactcagatatcatagtttggaagccgatttctttccttaa 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 gtatggtggcatctatctagactcagatatcatagtttggaagccgatttctttccttaa 75
Query: 1077 taattctgtcggtgtggaggagcatgctcctggtgctggtagcgctttgaatggtgctgt 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 taattctgtcggtgtggaggagcatgctcctggtgctggtagcgctttgaatggtgctgt 135
Query: 1137 gatggcatttgcaaagcacagtctattcataaaggagtgcatggaagagttctatacgac 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gatggcatttgcaaagcacagtctattcataaaggagtgcatggaagagttctatacgac 195
Query: 1197 atatgatgatactaatctgagatggaatggtgctgatctgttgacaagggttgcacgaaa 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atatgatgatactaatctgagatggaatggtgctgatctgttgacaagggttgcacgaaa 255
Query: 1257 gtttatgggagatgataataaatctattaaacagttggacttgaaagtggagccctctca 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtttatgggagatgataataaatctattaaacagttggacttgaaagtggagccctctca 315
Query: 1317 tatcttctttcctatcacttctcagaatatcacaagatattttattgcaccggcaacgga 1376
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 316 tatcttctttcctatcacttctcagaatatcgcaagatattttattgcaccggcaacgga 375
Query: 1377 gactgaaaaagctcaggaagatgttcttcttnnnnnnntaatgcaggagtcattgacatt 1436
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 376 gactgaaaaagctcaggaagatgttcttcttaaaaaaataatgcaggagtcattgacatt 435
Query: 1437 tcatttctggaacagcttgacatctgctctcatcccagaaccagatagccttgtgactag 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcatttctggaacagcttgacatctgctctcatcccagaaccagatagccttgtgactag 495
Query: 1497 gcttatgaattatgcttgtatccgatgcttggagttgttgtaa 1539
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcttatgaattatgcttgtatccgatgcttggagttgttgtaa 538
>gnl|LJGI|TC62705 similar to UniRef100_Q2MGS1 Cluster: Glycosyltransferase
sugar-binding region containing DXD motif; Alpha
1,4-glycosyltransferase conserved region; n=1; Medicago
truncatula|Rep: Glycosyltransferase sugar-binding region
containing DXD motif; Alpha 1,4-glycosyltransferase
conserved region - Medicago truncatula (Barrel medic),
partial (38%)
Length = 1054
Score = 950 bits (479), Expect = 0.0
Identities = 504/514 (98%), Gaps = 10/514 (1%)
Strand = Plus / Plus
Query: 403 ggcatggctggggtcactggttcgagaagaaaggcctctttctcagaaaagatagaatgt 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggcatggctggggtcactggttcgagaagaaaggcctctttctcagaaaagatagaatgt 610
Query: 463 tcaggttcgttgaagtcgagtttcgatgcgttgaatccagttaacaatccactgcttcaa 522
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tcaggt----------cgagtttcgatgcgttgaatccagttaacaatccactgcttcaa 660
Query: 523 gatcccgacggtgccggcgtcactggcttcaccagaggtgacaggatccttcaaaaatgg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatcccgacggtgccggcgtcactggcttcaccagaggtgacaggatccttcaaaaatgg 720
Query: 583 tggttgaatgagttcaagagagtgcccttccccggcaataaaaaccctaacaagttaccg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggttgaatgagttcaagagagtgcccttccccggcaataaaaaccctaacaagttaccg 780
Query: 643 atcgtgacgaagaaattaggaacggagcgtaagactttgaatgatgatgaaaacaacaag 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atcgtgacgaagaaattaggaacggagcgtaagactttgaatgatgatgaaaacaacaag 840
Query: 703 ggttcattgggtgatatcattgatgataggcatcatgagtttaggaatcatatatatgca 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggttcattgggtgatatcattgatgataggcatcatgagtttaggaatcatatatatgca 900
Query: 763 gatggtaacacttgggggtattttcccgggttgccgctgcgattgtcgttcgatgatttc 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gatggtaacacttgggggtattttcccgggttgccgctgcgattgtcgttcgatgatttc 960
Query: 823 atggaagcgttcttcaggaggggaaaatgtgtgatgagggtgtttatggtgtggaattct 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atggaagcgttcttcaggaggggaaaatgtgtgatgagggtgtttatggtgtggaattct 1020
Query: 883 ccgccttggatgtacaccgttcgctatcagcgtg 916
||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccgccttggatgtacaccgttcgctatcagcgtg 1054
Score = 547 bits (276), Expect = e-155
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 128 ttgacgagctcgacatcatcgtagatgaaaaccaacaggaggaccgccctctccacctca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttgacgagctcgacatcatcgtagatgaaaaccaacaggaggaccgccctctccacctca 301
Query: 188 acactccctcctccgcctacttcttcgatcccatctccgccgccatccgccgcgccttcc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acactccctcctccgcctacttcttcgatcccatctccgccgccatccgccgcgccttcc 361
Query: 248 tctcccctccttcctccatccaccaatggcactccttcgacaacgacgacaacaaattct 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tctcccctccttcctccatccaccaatggcactccttcgacaacgacgacaacaaattct 421
Query: 308 ccgctcccgtcgaccgctccatcaccgcgtttggctctgacgacgtccacctccacgatt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ccgctcccgtcgaccgctccatcaccgcgtttggctctgacgacgtccacctccacgatt 481
Query: 368 acctccggagcaagacaacgccggtaacctcaatcg 403
||||||||||||||||||||||||||||||||||||
Sbjct: 482 acctccggagcaagacaacgccggtaacctcaatcg 517
>gnl|LJGI|AW164006 similar to UniRef100_Q2MGS1 Cluster: Glycosyltransferase
sugar-binding region containing DXD motif; Alpha
1,4-glycosyltransferase conserved region; n=1; Medicago
truncatula|Rep: Glycosyltransferase sugar-binding region
containing DXD motif; Alpha 1,4-glycosyltransferase
conserved region - Medicago truncatula (Barrel medic),
partial (4%)
Length = 381
Score = 232 bits (117), Expect = 5e-60
Identities = 120/121 (99%)
Strand = Plus / Minus
Query: 1037 actcagatatcatagtttggaagccgatttctttccttaataattctgtcggtgtggagg 1096
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 actcagatatcatagtttggaacccgatttctttccttaataattctgtcggtgtggagg 322
Query: 1097 agcatgctcctggtgctggtagcgctttgaatggtgctgtgatggcatttgcaaagcaca 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcatgctcctggtgctggtagcgctttgaatggtgctgtgatggcatttgcaaagcaca 262
Query: 1157 g 1157
|
Sbjct: 261 g 261