Miyakogusa Predicted Gene
- Lj4g3v0901350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0901350.1 tr|A9T6Q6|A9T6Q6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=SDG1505 PE=3
SV=1,28.42,1e-16,no description,NULL; SET domain,NULL;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; SET,SET domain; SET
(Su(,CUFF.48168.1
(3129 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS345857 weakly similar to UniRef100_A7PV29 Cluster: Ch... 686 0.0
gnl|LJGI|GO016081 weakly similar to UniRef100_A7PV29 Cluster: Ch... 678 0.0
gnl|LJGI|BP065960 weakly similar to UniRef100_A9SP28 Cluster: Pr... 165 2e-39
gnl|LJGI|TC68342 similar to UniRef100_A7PV29 Cluster: Chromosome... 103 7e-21
gnl|LJGI|BP066597 similar to UniRef100_A2QQQ8 Cluster: Contig An... 70 9e-11
gnl|LJGI|AV415450 weakly similar to UniRef100_A7PV29 Cluster: Ch... 54 5e-06
>gnl|LJGI|FS345857 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 785
Score = 686 bits (346), Expect = 0.0
Identities = 352/354 (99%)
Strand = Plus / Minus
Query: 1 atgctgcttgttcgaccgattgatgagtttccgcagccgaccgcatacgaaactcatcag 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atgctgcttgttcgaccgatcgatgagtttccgcagccgaccgcatacgaaactcatcag 510
Query: 61 gaagcactggaaatcgtaaaagacttgactgttgtgcgacggttcacaatgcaagatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaagcactggaaatcgtaaaagacttgactgttgtgcgacggttcacaatgcaagatcta 450
Query: 121 gcccttagcatattgtacactcttgatcagcttcattcccatgctttagtagaaactgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gcccttagcatattgtacactcttgatcagcttcattcccatgctttagtagaaactgct 390
Query: 181 tgtgatgtgatggtctggaaggaacttgcaatgaaggcttctagttgtaacgcttattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgtgatgtgatggtctggaaggaacttgcaatgaaggcttctagttgtaacgcttattca 330
Query: 241 gatttggggagaatgcttctcaagctacaaaatagcatagcgccgcggtacataagtgct 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 329 gatttggggagaatgcttctcaagctacaaaatagcatagcgctgcggtacataagtgct 270
Query: 301 gactggatcaattcttcgtttgactcttgggcggaacgatgccggaatgtaaat 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gactggatcaattcttcgtttgactcttgggcggaacgatgccggaatgtaaat 216
>gnl|LJGI|GO016081 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 902
Score = 678 bits (342), Expect = 0.0
Identities = 351/354 (99%)
Strand = Plus / Minus
Query: 1 atgctgcttgttcgaccgattgatgagtttccgcagccgaccgcatacgaaactcatcag 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atgctgcttgttcgaccgatcgatgagtttccgcagccgaccgcatacgaaactcatcag 489
Query: 61 gaagcactggaaatcgtaaaagacttgactgttgtgcgacggttcacaatgcaagatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gaagcactggaaatcgtaaaagacttgactgttgtgcgacggttcacaatgcaagatcta 429
Query: 121 gcccttagcatattgtacactcttgatcagcttcattcccatgctttagtagaaactgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gcccttagcatattgtacactcttgatcagcttcattcccatgctttagtagaaactgct 369
Query: 181 tgtgatgtgatggtctggaaggaacttgcaatgaaggcttctagttgtaacgcttattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgtgatgtgatggtctggaaggaacttgcaatgaaggcttctagttgtaacgcttattca 309
Query: 241 gatttggggagaatgcttctcaagctacaaaatagcatagcgccgcggtacataagtgct 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 308 gatttggggagaatgcttctcaagctacaaaatagcatagcgctgcggtacataagtgct 249
Query: 301 gactggatcaattcttcgtttgactcttgggcggaacgatgccggaatgtaaat 354
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 248 gactggatcaattcttcgtttgacacttgggcggaacgatgccggaatgtaaat 195
>gnl|LJGI|BP065960 weakly similar to UniRef100_A9SP28 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(5%)
Length = 473
Score = 165 bits (83), Expect = 2e-39
Identities = 92/95 (96%)
Strand = Plus / Minus
Query: 3028 gtttttgtagagagcttggactgtaagcgttcccatattggtctttatgcaagtcgagac 3087
|||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 464 gtttttgttgagagcatggactgtaagcgttcccatattggtctttatgcgagtcgagac 405
Query: 3088 attgctttgggtgaagaattgacatttgattatca 3122
|||||||||||||||||||||||||||||||||||
Sbjct: 404 attgctttgggtgaagaattgacatttgattatca 370
>gnl|LJGI|TC68342 similar to UniRef100_A7PV29 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 607
Score = 103 bits (52), Expect = 7e-21
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 2953 attgatgctactagatatgggaatgtctctaggttcatcaatagcagctgctcacccaat 3012
|||||||| ||| |||||| ||||| || |||||||||||| |||||||||||| ||
Sbjct: 2 attgatgcatctaaatatggaaatgtgtcaaggttcatcaatcatagctgctcaccccat 61
Query: 3013 cttgtgagttacaatgtttttgtagagagcttggactgtaagcgttcccatattggtctt 3072
||||| ||| | | ||| | |||||||| |||| ||| ||||| | ||||| ||||||
Sbjct: 62 cttgtcagtcatcaagttctcatagagagcatggattgtgagcgtacacatatcggtctt 121
Query: 3073 tatgcaagtcgagacattgctttgggtgaaga 3104
|||||||||||||| |||||||||||||||||
Sbjct: 122 tatgcaagtcgagatattgctttgggtgaaga 153
>gnl|LJGI|BP066597 similar to UniRef100_A2QQQ8 Cluster: Contig An08c0100, complete
genome; n=1; Aspergillus niger|Rep: Contig An08c0100,
complete genome - Aspergillus niger, partial (3%)
Length = 534
Score = 69.9 bits (35), Expect = 9e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 3088 attgctttgggtgaagaattgacatttgattatca 3122
|||||||||||||||||||||||||||||||||||
Sbjct: 427 attgctttgggtgaagaattgacatttgattatca 393
>gnl|LJGI|AV415450 weakly similar to UniRef100_A7PV29 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 426
Score = 54.0 bits (27), Expect = 5e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2565 tgatgcgaaagacgtatttgggaaaccgatgcgtg 2599
|||||| |||||||||||||||||||| |||||||
Sbjct: 391 tgatgctaaagacgtatttgggaaaccaatgcgtg 425