Miyakogusa Predicted Gene

Lj4g3v0831020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0831020.1 tr|B9I4X5|B9I4X5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_569412 PE=4
SV=1,34.86,8e-19,seg,NULL,CUFF.48135.1
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g34340.1                                                       306   9e-84
Glyma09g29800.2                                                       280   1e-75
Glyma09g29800.1                                                       280   1e-75
Glyma14g39130.1                                                        57   2e-08

>Glyma16g34340.1 
          Length = 477

 Score =  306 bits (785), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 168/277 (60%), Positives = 196/277 (70%), Gaps = 24/277 (8%)

Query: 1   MSLSPAEKDNDCMTSKPAEVEEKGSLASVNLTTGLNPLMCMKSEIGAEETEGLKEDATNM 60
           +SLSPAEK+NDCMTSK +E EEK S AS+ L+T  NP MCMK E  +++T    EDA NM
Sbjct: 205 VSLSPAEKENDCMTSKASEEEEKASPASLPLSTVSNPNMCMKPEFSSKDT--FIEDAANM 262

Query: 61  PPISSSIKLFGRTVSMVGNLMSMKVDDENIKPETI---EMDDVENVKVGQVGASEPLDTQ 117
           P  ++SIKLFGRTVSMVGN  S+ +DD++ KP T+   E+DDVEN K+GQ G S+ +DTQ
Sbjct: 263 PQ-TTSIKLFGRTVSMVGNQKSLNIDDDDGKPITVKSDEVDDVENEKLGQSGESKQVDTQ 321

Query: 118 LSLGLSCGKL-----------TSIEHPKENLCXXXXXXXXXXXXXXXYQGLSAFNLRPCN 166
           LSLG+  G             TSIE PKENLC               YQGL  F LRPCN
Sbjct: 322 LSLGVVSGNWIITPDADGANTTSIEPPKENLCFSECAPDASFPQWSLYQGLPPFYLRPCN 381

Query: 167 HEILNPMPLRPCLKVRAREEESSCTGSNTESV------GKNSDTVDSKLQKYHEDGVAPQ 220
            ++LNP+PLRP LKVR REEES CTGSNTESV      GKNSD VDSK QKYH++G APQ
Sbjct: 382 -QVLNPLPLRPSLKVRTREEESCCTGSNTESVCDMENQGKNSDAVDSKCQKYHKEGAAPQ 440

Query: 221 KSGRGFVPYKRCLAERDANSLIVGLEEREGQRARLCS 257
           K  RGFVPYKRCL+ERD NSLIV +EEREGQRAR+CS
Sbjct: 441 KRARGFVPYKRCLSERDGNSLIVDMEEREGQRARVCS 477


>Glyma09g29800.2 
          Length = 466

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/279 (59%), Positives = 193/279 (69%), Gaps = 29/279 (10%)

Query: 1   MSLSPAEKDNDCMTSKPAEVEEKGSLASVNLTTGLNPLMCMKSEIGAEETEGLKEDATNM 60
           +SLSP EK+NDCMTSK +E EEK S AS  L+T  NP MCMK E  ++E E    DAT+M
Sbjct: 195 VSLSPVEKENDCMTSKESEEEEKASPASRPLSTVSNPKMCMKPEFSSKEIE----DATDM 250

Query: 61  PPISSSIKLFGRTVSMVGNLMSMKVDDENIKPETI---EMDDVENVKVGQVGASEPLDTQ 117
           P  ++SIKLFGRTVSMVGN  S+K+DD+  KP T+   E+DDVEN K+GQ G S+ +DTQ
Sbjct: 251 PQ-TTSIKLFGRTVSMVGNQKSLKIDDDG-KPITVKSDEVDDVENEKLGQSGESKQVDTQ 308

Query: 118 LSLGLSCGK-----------LTSIEHPKENLCXXXXXXXXXXXXXXXYQGLSAFNLRPCN 166
           LSLG+  G            +TSIE PKENLC                QGL  F LRPCN
Sbjct: 309 LSLGVVSGNWPITPDADGANVTSIEPPKENLCFSESAPDAFFPQWSLSQGLPPFYLRPCN 368

Query: 167 HEILNPMPLRPC-LKVRAREEESSCTGSNTESV------GKNSDTVDSKLQKYHEDGVAP 219
            ++LNP+PLRP  LKVR REEES CTGSNTESV      GKNSD VDSK QKYHE+G AP
Sbjct: 369 -QVLNPLPLRPSSLKVRTREEESCCTGSNTESVCDMENQGKNSDAVDSKFQKYHEEGAAP 427

Query: 220 QKS-GRGFVPYKRCLAERDANSLIVGLEEREGQRARLCS 257
           QK   RGFVPYKRCLAERD +S IV +EEREGQRAR+CS
Sbjct: 428 QKKPARGFVPYKRCLAERDGHSFIVAMEEREGQRARVCS 466


>Glyma09g29800.1 
          Length = 466

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/279 (59%), Positives = 193/279 (69%), Gaps = 29/279 (10%)

Query: 1   MSLSPAEKDNDCMTSKPAEVEEKGSLASVNLTTGLNPLMCMKSEIGAEETEGLKEDATNM 60
           +SLSP EK+NDCMTSK +E EEK S AS  L+T  NP MCMK E  ++E E    DAT+M
Sbjct: 195 VSLSPVEKENDCMTSKESEEEEKASPASRPLSTVSNPKMCMKPEFSSKEIE----DATDM 250

Query: 61  PPISSSIKLFGRTVSMVGNLMSMKVDDENIKPETI---EMDDVENVKVGQVGASEPLDTQ 117
           P  ++SIKLFGRTVSMVGN  S+K+DD+  KP T+   E+DDVEN K+GQ G S+ +DTQ
Sbjct: 251 PQ-TTSIKLFGRTVSMVGNQKSLKIDDDG-KPITVKSDEVDDVENEKLGQSGESKQVDTQ 308

Query: 118 LSLGLSCGK-----------LTSIEHPKENLCXXXXXXXXXXXXXXXYQGLSAFNLRPCN 166
           LSLG+  G            +TSIE PKENLC                QGL  F LRPCN
Sbjct: 309 LSLGVVSGNWPITPDADGANVTSIEPPKENLCFSESAPDAFFPQWSLSQGLPPFYLRPCN 368

Query: 167 HEILNPMPLRPC-LKVRAREEESSCTGSNTESV------GKNSDTVDSKLQKYHEDGVAP 219
            ++LNP+PLRP  LKVR REEES CTGSNTESV      GKNSD VDSK QKYHE+G AP
Sbjct: 369 -QVLNPLPLRPSSLKVRTREEESCCTGSNTESVCDMENQGKNSDAVDSKFQKYHEEGAAP 427

Query: 220 QKS-GRGFVPYKRCLAERDANSLIVGLEEREGQRARLCS 257
           QK   RGFVPYKRCLAERD +S IV +EEREGQRAR+CS
Sbjct: 428 QKKPARGFVPYKRCLAERDGHSFIVAMEEREGQRARVCS 466


>Glyma14g39130.1 
          Length = 436

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 16/86 (18%)

Query: 185 EEESSCTGSNTESV--GKNSDTVDSKLQKYHEDG-------------VAPQKSGRGFVPY 229
           ++E S TGSNT S+  G N++  D +  K H  G             V P+  G+GFVPY
Sbjct: 350 QKEGSWTGSNTSSIDDGDNTEKSDDQA-KSHVHGFSKSETLTISELRVRPKTCGKGFVPY 408

Query: 230 KRCLAERDANSLIVGLEEREGQRARL 255
           KRC+AER+     V  EERE QR +L
Sbjct: 409 KRCMAERENQCSSVYYEEREEQRIKL 434