Miyakogusa Predicted Gene

Lj4g3v0831020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0831020.1 tr|B9I4X5|B9I4X5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_569412 PE=4
SV=1,34.86,8e-19,seg,NULL,CUFF.48135.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g477860.1 | myb transcription factor | HC | chr6:28638569-...   290   8e-79
Medtr6g477860.2 | myb transcription factor | HC | chr6:28638613-...   289   2e-78
Medtr6g477860.3 | myb transcription factor | HC | chr6:28639040-...   289   2e-78
Medtr5g076960.2 | myb transcription factor | HC | chr5:32831868-...    48   1e-05

>Medtr6g477860.1 | myb transcription factor | HC |
           chr6:28638569-28642957 | 20130731
          Length = 467

 Score =  290 bits (742), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 166/270 (61%), Positives = 197/270 (72%), Gaps = 19/270 (7%)

Query: 1   MSLSPAEKDNDCMTSKPAEVEEKGSLASVNLTTGLNPLMCMKSE-IGAEETEGLKEDATN 59
           +SLSP EK+NDC TSKP+E EEKGSLAS+  +T   PLMCMKSE I +EET+  KEDA N
Sbjct: 204 VSLSPVEKENDCQTSKPSEEEEKGSLASIP-STDSKPLMCMKSENISSEETQSSKEDAAN 262

Query: 60  MPPISSSIKLFGRTVSMVGNLMSMKVDDENIKPETIEMDDVENV-KVGQVGASEPLDTQL 118
           MP I+S IKLFGRT+SM G+  SMK DDEN K  TI+ +++E+V KVGQ   SEPLD QL
Sbjct: 263 MPQITS-IKLFGRTLSM-GSQKSMKDDDENTKLITIKSNEMEDVEKVGQKEVSEPLDIQL 320

Query: 119 SLGLSC---GKLTSIEHPKENLCXXXXXXXXXXXXXXXYQGLSAFNLRPCNHEILNPMPL 175
           SLG+      +++S+E PKE+                 YQGL AF+L PCNH+ILNP+PL
Sbjct: 321 SLGICTPDGAQVSSMERPKES---PYVSECATLPLWSLYQGLPAFHLMPCNHQILNPVPL 377

Query: 176 RPCLKVRAREEESSCTGSNTESV--------GKNSDTVDSKLQKYHEDGVAPQKSGRGFV 227
           RPCLKV  REEESSCTGSNTESV          +SDT DS+ QK+ ++GV  +KSGRGFV
Sbjct: 378 RPCLKVITREEESSCTGSNTESVCDMENQSKNNSSDTDDSQTQKHRQEGVVLKKSGRGFV 437

Query: 228 PYKRCLAERDANSLIVGLEEREGQRARLCS 257
           PYKRCLAERD NSLI GLEEREGQRAR+CS
Sbjct: 438 PYKRCLAERDENSLIAGLEEREGQRARVCS 467


>Medtr6g477860.2 | myb transcription factor | HC |
           chr6:28638613-28642876 | 20130731
          Length = 372

 Score =  289 bits (740), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 166/270 (61%), Positives = 197/270 (72%), Gaps = 19/270 (7%)

Query: 1   MSLSPAEKDNDCMTSKPAEVEEKGSLASVNLTTGLNPLMCMKSE-IGAEETEGLKEDATN 59
           +SLSP EK+NDC TSKP+E EEKGSLAS+  +T   PLMCMKSE I +EET+  KEDA N
Sbjct: 109 VSLSPVEKENDCQTSKPSEEEEKGSLASIP-STDSKPLMCMKSENISSEETQSSKEDAAN 167

Query: 60  MPPISSSIKLFGRTVSMVGNLMSMKVDDENIKPETIEMDDVENV-KVGQVGASEPLDTQL 118
           MP I+S IKLFGRT+SM G+  SMK DDEN K  TI+ +++E+V KVGQ   SEPLD QL
Sbjct: 168 MPQITS-IKLFGRTLSM-GSQKSMKDDDENTKLITIKSNEMEDVEKVGQKEVSEPLDIQL 225

Query: 119 SLGLSC---GKLTSIEHPKENLCXXXXXXXXXXXXXXXYQGLSAFNLRPCNHEILNPMPL 175
           SLG+      +++S+E PKE+                 YQGL AF+L PCNH+ILNP+PL
Sbjct: 226 SLGICTPDGAQVSSMERPKES---PYVSECATLPLWSLYQGLPAFHLMPCNHQILNPVPL 282

Query: 176 RPCLKVRAREEESSCTGSNTESV--------GKNSDTVDSKLQKYHEDGVAPQKSGRGFV 227
           RPCLKV  REEESSCTGSNTESV          +SDT DS+ QK+ ++GV  +KSGRGFV
Sbjct: 283 RPCLKVITREEESSCTGSNTESVCDMENQSKNNSSDTDDSQTQKHRQEGVVLKKSGRGFV 342

Query: 228 PYKRCLAERDANSLIVGLEEREGQRARLCS 257
           PYKRCLAERD NSLI GLEEREGQRAR+CS
Sbjct: 343 PYKRCLAERDENSLIAGLEEREGQRARVCS 372


>Medtr6g477860.3 | myb transcription factor | HC |
           chr6:28639040-28642876 | 20130731
          Length = 372

 Score =  289 bits (740), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 166/270 (61%), Positives = 197/270 (72%), Gaps = 19/270 (7%)

Query: 1   MSLSPAEKDNDCMTSKPAEVEEKGSLASVNLTTGLNPLMCMKSE-IGAEETEGLKEDATN 59
           +SLSP EK+NDC TSKP+E EEKGSLAS+  +T   PLMCMKSE I +EET+  KEDA N
Sbjct: 109 VSLSPVEKENDCQTSKPSEEEEKGSLASIP-STDSKPLMCMKSENISSEETQSSKEDAAN 167

Query: 60  MPPISSSIKLFGRTVSMVGNLMSMKVDDENIKPETIEMDDVENV-KVGQVGASEPLDTQL 118
           MP I+S IKLFGRT+SM G+  SMK DDEN K  TI+ +++E+V KVGQ   SEPLD QL
Sbjct: 168 MPQITS-IKLFGRTLSM-GSQKSMKDDDENTKLITIKSNEMEDVEKVGQKEVSEPLDIQL 225

Query: 119 SLGLSC---GKLTSIEHPKENLCXXXXXXXXXXXXXXXYQGLSAFNLRPCNHEILNPMPL 175
           SLG+      +++S+E PKE+                 YQGL AF+L PCNH+ILNP+PL
Sbjct: 226 SLGICTPDGAQVSSMERPKES---PYVSECATLPLWSLYQGLPAFHLMPCNHQILNPVPL 282

Query: 176 RPCLKVRAREEESSCTGSNTESV--------GKNSDTVDSKLQKYHEDGVAPQKSGRGFV 227
           RPCLKV  REEESSCTGSNTESV          +SDT DS+ QK+ ++GV  +KSGRGFV
Sbjct: 283 RPCLKVITREEESSCTGSNTESVCDMENQSKNNSSDTDDSQTQKHRQEGVVLKKSGRGFV 342

Query: 228 PYKRCLAERDANSLIVGLEEREGQRARLCS 257
           PYKRCLAERD NSLI GLEEREGQRAR+CS
Sbjct: 343 PYKRCLAERDENSLIAGLEEREGQRARVCS 372


>Medtr5g076960.2 | myb transcription factor | HC |
           chr5:32831868-32828410 | 20130731
          Length = 319

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 13/91 (14%)

Query: 178 CLKVRAREEESSCTGSNT-------ESVGKNSDTVDSKLQKYH------EDGVAPQKSGR 224
           C     ++E SSC GSN+       ES  +  D   S    Y        + V  +  G+
Sbjct: 227 CEDKEIQKEGSSCVGSNSTSSISDEESNERLDDQAKSDNVNYFVGHTTLNETVRLRTFGK 286

Query: 225 GFVPYKRCLAERDANSLIVGLEEREGQRARL 255
           GFVPYKRC+AER+     V  E RE QR RL
Sbjct: 287 GFVPYKRCMAERERQCSTVTDERREHQRMRL 317