Miyakogusa Predicted Gene

Lj4g3v0831020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0831020.1 tr|B9I4X5|B9I4X5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_569412 PE=4
SV=1,34.86,8e-19,seg,NULL,CUFF.48135.1
         (257 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |...    48   7e-06
AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    48   8e-06
AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    47   9e-06

>AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3118043-3119391 REVERSE LENGTH=336
          Length = 336

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 13/83 (15%)

Query: 187 ESSCTGSN--------TESVGKNSDTVDS---KLQKYHEDGVAPQKSGRGFVPYKRCLAE 235
           E+ CTGSN        +E++ K+++ + S   +L    + G     +  GF PYKRCL+E
Sbjct: 254 ETFCTGSNAFGSVTEASENLEKSAEPISSSWKRLSSLEKQGSCNPVNASGFRPYKRCLSE 313

Query: 236 RDANS--LIVGLEEREGQRARLC 256
           R+  S   +V  +E++ QRAR+C
Sbjct: 314 REVTSSLTLVASDEKKSQRARIC 336


>AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307640 REVERSE LENGTH=346
          Length = 346

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 13/83 (15%)

Query: 187 ESSCTGSN--------TESVGKNSDTVDS---KLQKYHEDGVAPQKSGRGFVPYKRCLAE 235
           E+ CTGSN        +E++ K+++ + S   +L    + G     +  GF PYKRCL+E
Sbjct: 264 ETFCTGSNAFGSVTEASENLEKSAEPISSSWKRLSSLEKQGSCNPVNASGFRPYKRCLSE 323

Query: 236 RDANS--LIVGLEEREGQRARLC 256
           R+  S   +V  +E++ QRAR+C
Sbjct: 324 REVTSSLTLVASDEKKSQRARIC 346


>AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307718 REVERSE LENGTH=372
          Length = 372

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 13/83 (15%)

Query: 187 ESSCTGSN--------TESVGKNSDTVDS---KLQKYHEDGVAPQKSGRGFVPYKRCLAE 235
           E+ CTGSN        +E++ K+++ + S   +L    + G     +  GF PYKRCL+E
Sbjct: 290 ETFCTGSNAFGSVTEASENLEKSAEPISSSWKRLSSLEKQGSCNPVNASGFRPYKRCLSE 349

Query: 236 RDANS--LIVGLEEREGQRARLC 256
           R+  S   +V  +E++ QRAR+C
Sbjct: 350 REVTSSLTLVASDEKKSQRARIC 372