Miyakogusa Predicted Gene
- Lj4g3v0793250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0793250.1 tr|Q7X9B8|Q7X9B8_SOYBN Ferrous ion membrane
transport protein DMT1 OS=Glycine max GN=DMT1 PE=2
SV=1,81.82,0,seg,NULL; Nramp,Natural resistance-associated macrophage
protein; NATURAL RESISTANCE-ASSOCIATED MACR,gene.g53391.t1.1
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60215 similar to UniRef100_Q7X9B8 Cluster: Ferrous io... 1059 0.0
gnl|LJGI|TC66340 similar to UniRef100_Q7X9B8 Cluster: Ferrous io... 478 e-134
gnl|LJGI|TC61751 similar to UniRef100_Q7X9B8 Cluster: Ferrous io... 172 3e-42
gnl|LJGI|FS355798 similar to UniRef100_A6YPU3 Cluster: Metal tra... 145 7e-34
>gnl|LJGI|TC60215 similar to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane transport
protein DMT1; n=1; Glycine max|Rep: Ferrous ion membrane
transport protein DMT1 - Glycine max (Soybean), partial
(48%)
Length = 1349
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atgccttataatctattcttgcactctgctcttgttcaatcaaggaagattgaccacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 atgccttataatctattcttgcactctgctcttgttcaatcaaggaagattgaccacacc 875
Query: 61 aacaaaggacgagttcaagaagctcttaactattactctattcagtccacccttgcgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 aacaaaggacgagttcaagaagctcttaactattactctattcagtccacccttgcgctt 935
Query: 121 ctcgtctcctttgtcattaacatatttgtaacatctgtgtttgccaaggggttttatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ctcgtctcctttgtcattaacatatttgtaacatctgtgtttgccaaggggttttatggt 995
Query: 181 tctaaaatagcaaataacattggtcttgcaaatgcaggacaatatcttcaggaggtgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 tctaaaatagcaaataacattggtcttgcaaatgcaggacaatatcttcaggaggtgtat 1055
Query: 241 ggtagtggagtatttccaatattatttatatggggtattggtttattagcagccggacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 ggtagtggagtatttccaatattatttatatggggtattggtttattagcagccggacaa 1115
Query: 301 agtagcactattactggtacttatgctgggcaatttatcatgggaggatttctaaattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 agtagcactattactggtacttatgctgggcaatttatcatgggaggatttctaaattta 1175
Query: 361 aggatcaaaaaatggatgagggcattaatcacccgcagttgtgcaataataccaaccatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 aggatcaaaaaatggatgagggcattaatcacccgcagttgtgcaataataccaaccatg 1235
Query: 421 gctgttgctcttatatttgattcctcaaagcaatcactggatgttcttagtgggtggctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 gctgttgctcttatatttgattcctcaaagcaatcactggatgttcttagtgggtggctt 1295
Query: 481 aatgttattcagtcagtccaaatcccatttgcacttattcctttgctctgtcta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 aatgttattcagtcagtccaaatcccatttgcacttattcctttgctctgtcta 1349
>gnl|LJGI|TC66340 similar to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane transport
protein DMT1; n=1; Glycine max|Rep: Ferrous ion membrane
transport protein DMT1 - Glycine max (Soybean), partial
(66%)
Length = 1129
Score = 478 bits (241), Expect = e-134
Identities = 331/361 (91%)
Strand = Plus / Plus
Query: 1 atgccttataatctattcttgcactctgctcttgttcaatcaaggaagattgaccacacc 60
|||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 766 atgccttacaatgtattcttgcactctgctcttgttcaatcgaggaagattgaccacagc 825
Query: 61 aacaaaggacgagttcaagaagctcttaactattactctattcagtccacccttgcgctt 120
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 826 aacaaaggacgggttcaagaagctcttaactattactctatagagtccacccttgcactt 885
Query: 121 ctcgtctcctttgtcattaacatatttgtaacatctgtgtttgccaaggggttttatggt 180
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 886 gtcgtctcctttgtcattaacatatttgtgacaactgtgtttgccaaggggttttatggt 945
Query: 181 tctaaaatagcaaataacattggtcttgcaaatgcaggacaatatcttcaggaggtgtat 240
||| || ||||| ||| ||||||||||| |||||||||||| ||||||||||| | ||||
Sbjct: 946 tctgaagtagcagatagcattggtcttgtaaatgcaggacagtatcttcaggacgcgtat 1005
Query: 241 ggtagtggagtatttccaatattatttatatggggtattggtttattagcagccggacaa 300
||| |||||||| ||||||| |||| ||||||||||||||| ||||| |||||||| |||
Sbjct: 1006 ggtggtggagtagttccaattttatatatatggggtattgggttattggcagccggccaa 1065
Query: 301 agtagcactattactggtacttatgctgggcaatttatcatgggaggatttctaaattta 360
|||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 1066 agtagcactattgctggtacttatgccggacaatttatcatgggagggtttctaaattta 1125
Query: 361 a 361
|
Sbjct: 1126 a 1126
>gnl|LJGI|TC61751 similar to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane transport
protein DMT1; n=1; Glycine max|Rep: Ferrous ion membrane
transport protein DMT1 - Glycine max (Soybean), partial
(14%)
Length = 708
Score = 172 bits (87), Expect = 3e-42
Identities = 99/103 (96%)
Strand = Plus / Plus
Query: 580 ctcaagactatttcttggcttgtggctgctctggtgataatgattaatggctatttcttg 639
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 1 ctcaagactatttcttggcttgtggctgctctggtgacaatgattaatggctatctcttg 60
Query: 640 atggaattcttctcatctgaagtgaatggagcaatagttggcg 682
||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 gtggaattcttctcctctgaagtgaatggagcaatagttggcg 103
Score = 71.9 bits (36), Expect = 8e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 764 cggcggctgttctgatcaaactctttggccaaaagtttaaggtgttag 811
||||||||||| |||||||| ||||||||| |||||||||||||||||
Sbjct: 514 cggcggctgttatgatcaaattctttggccgaaagtttaaggtgttag 561
>gnl|LJGI|FS355798 similar to UniRef100_A6YPU3 Cluster: Metal transporter NRAMP3; n=1;
Thlaspi caerulescens|Rep: Metal transporter NRAMP3 -
Thlaspi caerulescens (Alpine penny-cress) (Thlaspi
calaminare), partial (4%)
Length = 548
Score = 145 bits (73), Expect = 7e-34
Identities = 76/77 (98%)
Strand = Plus / Minus
Query: 616 ataatgattaatggctatttcttgatggaattcttctcatctgaagtgaatggagcaata 675
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 548 ataatgattaatggctatttcttgatggaattcttctcatttgaagtgaatggagcaata 489
Query: 676 gttggcgttatactggg 692
|||||||||||||||||
Sbjct: 488 gttggcgttatactggg 472
Score = 141 bits (71), Expect = 1e-32
Identities = 74/75 (98%)
Strand = Plus / Minus
Query: 691 ggatgtgccattctgctcaaggatttcatgagtctcatgtctacttttacccctgatcct 750
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggatgtgccattttgctcaaggatttcatgagtctcatgtctacttttacccctgatcct 264
Query: 751 ttcagggtattctcg 765
|||||||||||||||
Sbjct: 263 ttcagggtattctcg 249