Miyakogusa Predicted Gene

Lj4g3v0756940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0756940.1 Non Chatacterized Hit- tr|I1K2E7|I1K2E7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51881
PE,83.05,0,TELOMERIC REPEAT BINDING PROTEIN 1,NULL; TELOMERIC REPEAT
BINDING PROTEIN,NULL; coiled-coil,NULL; "W,CUFF.47973.1
         (295 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G49950.1 | Symbols: TRB1, ATTRB1 | telomere repeat binding fa...   200   8e-52
AT1G49950.2 | Symbols: TRB1, ATTRB1 | telomere repeat binding fa...   200   8e-52
AT1G49950.3 | Symbols: TRB1, ATTRB1 | telomere repeat binding fa...   200   8e-52
AT5G67580.2 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | Homeodomain-...   180   1e-45
AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | Homeodomain-...   180   1e-45
AT3G49850.1 | Symbols: TRB3, ATTRB3, TBP2 | telomere repeat bind...   161   4e-40
AT1G72740.2 | Symbols:  | Homeodomain-like/winged-helix DNA-bind...   114   1e-25
AT1G72740.1 | Symbols:  | Homeodomain-like/winged-helix DNA-bind...   108   6e-24
AT1G17520.1 | Symbols:  | Homeodomain-like/winged-helix DNA-bind...   101   7e-22
AT2G30620.2 | Symbols:  | winged-helix DNA-binding transcription...    57   2e-08
AT2G30620.1 | Symbols:  | winged-helix DNA-binding transcription...    56   3e-08

>AT1G49950.1 | Symbols: TRB1, ATTRB1 | telomere repeat binding
           factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300
          Length = 300

 Score =  200 bits (509), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/242 (45%), Positives = 155/242 (64%), Gaps = 10/242 (4%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L +RSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  I-WGSRQXXXXXXXXXXXXXXIDNSHLALSTVVQREE--VLDTKPLAISDGTLQSPNSKD 117
             WGSR+               + + LAL+  +Q +E  V  T  L +S     +P  + 
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSS----NPPPRR 116

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
              RL D+ I+EAI  +KE  GC+K  I +Y+E++Y  PP+ ++LLSTK+K++ + GK++
Sbjct: 117 PNVRL-DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLV 175

Query: 178 KEKLKYRIPPSSAVSEKRRCSSVILLEDRPRDSRETEKS--DEVHILSKSQIDAELSKGK 235
           K K KYRIP S+ +S  RR    +    +   S  + K+  DEV+  ++SQID E+++ K
Sbjct: 176 KVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMK 235

Query: 236 RM 237
            M
Sbjct: 236 SM 237


>AT1G49950.2 | Symbols: TRB1, ATTRB1 | telomere repeat binding
           factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300
          Length = 300

 Score =  200 bits (509), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/242 (45%), Positives = 155/242 (64%), Gaps = 10/242 (4%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L +RSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  I-WGSRQXXXXXXXXXXXXXXIDNSHLALSTVVQREE--VLDTKPLAISDGTLQSPNSKD 117
             WGSR+               + + LAL+  +Q +E  V  T  L +S     +P  + 
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSS----NPPPRR 116

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
              RL D+ I+EAI  +KE  GC+K  I +Y+E++Y  PP+ ++LLSTK+K++ + GK++
Sbjct: 117 PNVRL-DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLV 175

Query: 178 KEKLKYRIPPSSAVSEKRRCSSVILLEDRPRDSRETEKS--DEVHILSKSQIDAELSKGK 235
           K K KYRIP S+ +S  RR    +    +   S  + K+  DEV+  ++SQID E+++ K
Sbjct: 176 KVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMK 235

Query: 236 RM 237
            M
Sbjct: 236 SM 237


>AT1G49950.3 | Symbols: TRB1, ATTRB1 | telomere repeat binding
           factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300
          Length = 300

 Score =  200 bits (509), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/242 (45%), Positives = 155/242 (64%), Gaps = 10/242 (4%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MGAPKQKWT EEE+ALK+GV+KHG GKWRTIL DPEFS +L +RSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60

Query: 61  I-WGSRQXXXXXXXXXXXXXXIDNSHLALSTVVQREE--VLDTKPLAISDGTLQSPNSKD 117
             WGSR+               + + LAL+  +Q +E  V  T  L +S     +P  + 
Sbjct: 61  NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSS----NPPPRR 116

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
              RL D+ I+EAI  +KE  GC+K  I +Y+E++Y  PP+ ++LLSTK+K++ + GK++
Sbjct: 117 PNVRL-DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLV 175

Query: 178 KEKLKYRIPPSSAVSEKRRCSSVILLEDRPRDSRETEKS--DEVHILSKSQIDAELSKGK 235
           K K KYRIP S+ +S  RR    +    +   S  + K+  DEV+  ++SQID E+++ K
Sbjct: 176 KVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMK 235

Query: 236 RM 237
            M
Sbjct: 236 SM 237


>AT5G67580.2 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 |
           Homeodomain-like/winged-helix DNA-binding family protein
           | chr5:26955843-26957073 REVERSE LENGTH=299
          Length = 299

 Score =  180 bits (456), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 148/241 (61%), Gaps = 4/241 (1%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MGAPKQKWT EEEAALKAGV+KHG GKWRTIL+D EFS IL+ RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60

Query: 61  IWGSRQXXXXXXXXXXXXXXIDNSHLALSTVV---QREEVLDTKPLAISDGTLQSPNSKD 117
           +WGSR+               D+++ AL+ V      E    T P     G+ ++  SK 
Sbjct: 61  LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASKR 120

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
            ++ L D  I EAI N++E +G D+ +I  Y+EE ++ PPN+++ ++ ++KH+ ++G ++
Sbjct: 121 SITSL-DKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLV 179

Query: 178 KEKLKYRIPPSSAVSEKRRCSSVILLEDRPRDSRETEKSDEVHILSKSQIDAELSKGKRM 237
           K K KYR   +   +  R+ +  + LE   +      + +  + L+K ++D EL   K M
Sbjct: 180 KIKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPTKPEENGANSLTKFRVDGELYMIKGM 239

Query: 238 T 238
           T
Sbjct: 240 T 240


>AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 |
           Homeodomain-like/winged-helix DNA-binding family protein
           | chr5:26955843-26957073 REVERSE LENGTH=299
          Length = 299

 Score =  180 bits (456), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 148/241 (61%), Gaps = 4/241 (1%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MGAPKQKWT EEEAALKAGV+KHG GKWRTIL+D EFS IL+ RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60

Query: 61  IWGSRQXXXXXXXXXXXXXXIDNSHLALSTVV---QREEVLDTKPLAISDGTLQSPNSKD 117
           +WGSR+               D+++ AL+ V      E    T P     G+ ++  SK 
Sbjct: 61  LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASKR 120

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
            ++ L D  I EAI N++E +G D+ +I  Y+EE ++ PPN+++ ++ ++KH+ ++G ++
Sbjct: 121 SITSL-DKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLV 179

Query: 178 KEKLKYRIPPSSAVSEKRRCSSVILLEDRPRDSRETEKSDEVHILSKSQIDAELSKGKRM 237
           K K KYR   +   +  R+ +  + LE   +      + +  + L+K ++D EL   K M
Sbjct: 180 KIKHKYRFSSNFIPAGARQKAPQLFLEGNNKKDPTKPEENGANSLTKFRVDGELYMIKGM 239

Query: 238 T 238
           T
Sbjct: 240 T 240


>AT3G49850.1 | Symbols: TRB3, ATTRB3, TBP2 | telomere repeat binding
           factor 3 | chr3:18489451-18490731 FORWARD LENGTH=295
          Length = 295

 Score =  161 bits (408), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 145/238 (60%), Gaps = 15/238 (6%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MGAPK KWT EEE ALKAGV+KHG GKWRTIL+DP +S+IL+ RSNVDLKDKWRNI+VTA
Sbjct: 1   MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60

Query: 61  IWGSRQXXX-XXXXXXXXXXXIDNSHLALSTV------VQREEVLDTKPLAISDGTLQSP 113
           +WGSR+                D++  A++ V      V  +++    P A   G+ + P
Sbjct: 61  LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPA---GSCEPP 117

Query: 114 NSKDHMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVAS 173
                + ++    ILEAI ++K   G D  +I  Y+EE ++  P++++L+++++K++   
Sbjct: 118 RPSTSVDKI----ILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNV 173

Query: 174 GKIIKEKLKYRIPPSSAVSEKRRCSSVILLEDRPRDSRETEKSDEVHILSKSQIDAEL 231
           G ++K+K KYRI  +     + + S  +LLE    ++ + E+ + V  L+KSQ+  E+
Sbjct: 174 GTLVKKKHKYRISQNYMAEGEGQRSPQLLLEGNKENTPKPEE-NGVKNLTKSQVGGEV 230


>AT1G72740.2 | Symbols:  | Homeodomain-like/winged-helix DNA-binding
           family protein | chr1:27380499-27382687 REVERSE
           LENGTH=281
          Length = 281

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 98/194 (50%), Gaps = 6/194 (3%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MG  K KWTAEEE AL AG+ KHG GKW+ IL DPEF+  L  RSN+DLKDKWRN++V  
Sbjct: 1   MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60

Query: 61  IWGSRQXXXXXXXXXXXXXXIDNSHLALSTVVQREEVLDTKPLAISDGTLQS---PNSKD 117
                Q               D      +  V     + T P      TL S   P+   
Sbjct: 61  ---GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDENT 117

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
             +   D  I EA+  + +  G D  +I  ++E +++ PPN R++LST+++ + A  K+ 
Sbjct: 118 KNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQSKLE 177

Query: 178 KEKLKYRIPPSSAV 191
           K +  Y+IP  S  
Sbjct: 178 KIQNFYKIPDPSGT 191


>AT1G72740.1 | Symbols:  | Homeodomain-like/winged-helix DNA-binding
           family protein | chr1:27380499-27382687 REVERSE
           LENGTH=287
          Length = 287

 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 92/181 (50%), Gaps = 6/181 (3%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60
           MG  K KWTAEEE AL AG+ KHG GKW+ IL DPEF+  L  RSN+DLKDKWRN++V  
Sbjct: 1   MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60

Query: 61  IWGSRQXXXXXXXXXXXXXXIDNSHLALSTVVQREEVLDTKPLAISDGTLQS---PNSKD 117
                Q               D      +  V     + T P      TL S   P+   
Sbjct: 61  ---GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDENT 117

Query: 118 HMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMKHMVASGKII 177
             +   D  I EA+  + +  G D  +I  ++E +++ PPN R++LST+++ + A  K+ 
Sbjct: 118 KNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQSKLE 177

Query: 178 K 178
           K
Sbjct: 178 K 178


>AT1G17520.1 | Symbols:  | Homeodomain-like/winged-helix DNA-binding
           family protein | chr1:6024959-6027224 REVERSE LENGTH=296
          Length = 296

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 17/190 (8%)

Query: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVT- 59
           MG  K KWTAEEE AL AGV KHG GKW+ IL DPE +  L  RSN+DLKDKWRN++V  
Sbjct: 1   MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60

Query: 60  AIWGSR--------QXXXXXXXXXXXXXXIDNSHLALSTVVQREEVLDTKPLAISDG--- 108
            I GS+        +              +  +H   S+ V       +  L+I D    
Sbjct: 61  GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRSGSSDLSIDDSFNI 120

Query: 109 TLQSPNSKDHMSRLGDNHILEAIVNMKEQKGCDKVAIASYLEEKYQCPPNLRKLLSTKMK 168
            +   N+  +     D  I EA+ N+ +  G D  AI +++E++ + PPN R++LS++++
Sbjct: 121 VVDPKNAPRY-----DGMIFEALSNLTDANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLR 175

Query: 169 HMVASGKIIK 178
            + A GK+ K
Sbjct: 176 RLAAQGKLEK 185


>AT2G30620.2 | Symbols:  | winged-helix DNA-binding transcription
           factor family protein | chr2:13045360-13046267 FORWARD
           LENGTH=202
          Length = 202

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 124 DNHILEAIVNMKEQKGCDKVAIASYLEEKYQC-PPNLRKLLSTKMKHMVASGKIIKEKLK 182
           +  I +AIV +KE+ G  + AI  ++EEK++  PP  RKLL   +K +VAS K++K K  
Sbjct: 66  EEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKAS 125

Query: 183 YRIP-------PSSAVSEKRRCSSVILLEDRPRDSRETEKSD 217
           ++IP       P  A   K++ + V     +P+ SR + ++ 
Sbjct: 126 FKIPSARSAATPKPAAPVKKKATVVA----KPKASRTSTRTS 163


>AT2G30620.1 | Symbols:  | winged-helix DNA-binding transcription
           factor family protein | chr2:13045360-13046267 FORWARD
           LENGTH=273
          Length = 273

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 124 DNHILEAIVNMKEQKGCDKVAIASYLEEKYQC-PPNLRKLLSTKMKHMVASGKIIKEKLK 182
           +  I +AIV +KE+ G  + AI  ++EEK++  PP  RKLL   +K +VAS K++K K  
Sbjct: 66  EEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKAS 125

Query: 183 YRIP 186
           ++IP
Sbjct: 126 FKIP 129