Miyakogusa Predicted Gene

Lj4g3v0668410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0668410.1 tr|A9RG30|A9RG30_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65655
,44.44,5e-18, ,CUFF.47857.1
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g03000.1                                                       394   e-110
Glyma07g35140.1                                                       296   1e-80

>Glyma20g03000.1 
          Length = 249

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/241 (81%), Positives = 212/241 (87%), Gaps = 1/241 (0%)

Query: 1   MVLCGCSFCFNLRDRIQPWIRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVSLINVAI 60
           M+LCG SFC NLRDRIQ WIRDYDRLQSFAVILIY+QIGCALIGSLGA YNGVSL+N+AI
Sbjct: 1   MMLCG-SFCLNLRDRIQQWIRDYDRLQSFAVILIYLQIGCALIGSLGASYNGVSLVNLAI 59

Query: 61  ALFALVAIESSSQSLGRTYAFLLFCAILLDISWFILFTHEIWNISEASYAAFFIFSVKLT 120
           ALFALVAIESSSQSLGRTYAFLLFCAILLDISWFILF +EIWNIS   Y  FF FSVKLT
Sbjct: 60  ALFALVAIESSSQSLGRTYAFLLFCAILLDISWFILFANEIWNISTKYYTTFFTFSVKLT 119

Query: 121 LAMQIVGFIVRLFSSLLWIQIYRLGASYVDTASRVADFDLRNSFLSPVAPPVVRQCSNSN 180
           LAMQIVGF VRL SSLLWIQIYRLGASYV+ ASR AD DLR+SFLSP+ P V RQCSNSN
Sbjct: 120 LAMQIVGFTVRLSSSLLWIQIYRLGASYVNAASRAADSDLRSSFLSPMTPAVARQCSNSN 179

Query: 181 EILGGSIYDPAYYSSLFEDGQENKYTSGMCNNDITQNESTSASNGSQKSSKCKSFQAVDE 240
           EILGGSIYDP+YYSSLFED QENKY+S M N++ TQNESTS++  S KS+  +SFQA DE
Sbjct: 180 EILGGSIYDPSYYSSLFEDAQENKYSSEMENHETTQNESTSSAEVSLKSTMGRSFQAADE 239

Query: 241 E 241
           E
Sbjct: 240 E 240


>Glyma07g35140.1 
          Length = 249

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/172 (86%), Positives = 156/172 (90%), Gaps = 1/172 (0%)

Query: 1   MVLCGCSFCFNLRDRIQPWIRDYDRLQSFAVILIYIQIGCALIGSLGALYNGVSLINVAI 60
           M+LCG SFC NLRDRIQPWIRDYDRLQSFAVILIY+QIGCALIGSLGA YNG+SLIN+AI
Sbjct: 79  MMLCG-SFCLNLRDRIQPWIRDYDRLQSFAVILIYLQIGCALIGSLGASYNGLSLINLAI 137

Query: 61  ALFALVAIESSSQSLGRTYAFLLFCAILLDISWFILFTHEIWNISEASYAAFFIFSVKLT 120
           ALFALVAIESSSQSLGRTYAFLLFCAILLDISWFILF++EIW IS   Y AFF FSVKLT
Sbjct: 138 ALFALVAIESSSQSLGRTYAFLLFCAILLDISWFILFSNEIWTISTKDYTAFFTFSVKLT 197

Query: 121 LAMQIVGFIVRLFSSLLWIQIYRLGASYVDTASRVADFDLRNSFLSPVAPPV 172
           LAMQIVGF VRL SSLLWIQIYRLGASYVD ASRVAD D R SFLSP+AP V
Sbjct: 198 LAMQIVGFTVRLSSSLLWIQIYRLGASYVDAASRVADSDSRISFLSPMAPAV 249