Miyakogusa Predicted Gene
- Lj4g3v0668360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0668360.1 tr|C1EJ26|C1EJ26_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_89045
,37.04,2e-18,GLUCOSIDASE II BETA SUBUNIT,Glucosidase 2 subunit beta;
N-LINKED OLIGOSACCHARIDE PROCESSING,NULL; Ma,CUFF.47856.1
(1872 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598085 similar to UniRef100_A7P0C1 Cluster: Chromosom... 827 0.0
gnl|LJGI|BP073721 similar to UniRef100_A7P0C1 Cluster: Chromosom... 274 2e-72
gnl|LJGI|DC595865 170 2e-41
gnl|LJGI|GO023614 similar to UniRef100_A7PJC8 Cluster: Chromosom... 58 2e-07
>gnl|LJGI|DC598085 similar to UniRef100_A7P0C1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 551
Score = 827 bits (417), Expect = 0.0
Identities = 420/421 (99%)
Strand = Plus / Plus
Query: 1 atgaagctggggctgattttcctcttcatttcactactgctcccattttcttcttcgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgaagctggggctgattttcctcttcatttcactactgctcccattttcttcttcgtca 190
Query: 61 aaacccagcaacccattccttggaatcgctcctcaagatgacaagtattacaaatcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaacccagcaacccattccttggaatcgctcctcaagatgacaagtattacaaatcttcc 250
Query: 121 gatgtgatcaagtgtaaagatggatccggaaaattcaacaaagaccacctcaatgatgat 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatgtgatcaagtgtgaagatggatccggaaaattcaacaaagaccacctcaatgatgat 310
Query: 181 ttctgtgactgccttgatggcaccgatgagcctggtacatcggcatgtccgcgtgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttctgtgactgccttgatggcaccgatgagcctggtacatcggcatgtccgcgtgggaag 370
Query: 241 ttttattgtcggaatgcggggcattctccggtttacctgttttcttctagagtgaatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttttattgtcggaatgcggggcattctccggtttacctgttttcttctagagtgaatgat 430
Query: 301 ggaatttgcgattgttgtgatggaactgatgaatatgatggcaaagcaaagtgcccaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggaatttgcgattgttgtgatggaactgatgaatatgatggcaaagcaaagtgcccaaat 490
Query: 361 acgtgctgggaggctgggaaagttgctcggaataagctgaagaaaaagattgccacgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 acgtgctgggaggctgggaaagttgctcggaataagctgaagaaaaagattgccacgtat 550
Query: 421 c 421
|
Sbjct: 551 c 551
>gnl|LJGI|BP073721 similar to UniRef100_A7P0C1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 394
Score = 274 bits (138), Expect = 2e-72
Identities = 154/162 (95%)
Strand = Plus / Plus
Query: 1376 atgctgctcgtatacgcaaggaatatgatgaatcaagtaccaagttgtctaaaatacagt 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atgctgctcgtatacgcaaggaatatgatgaatcaagtaccaagttgtctaaaatacagt 64
Query: 1436 ctagaatatcgagcctgnnnnnnnngctaaaacaggattttggtccagcaaaggagtttt 1495
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 65 ctagaatatcgagcctgaaaaaaaagctaaaacaggattttggtccagcaaaggagtttt 124
Query: 1496 attcattctatgaccgatgctttgagagcaagcagaacaagt 1537
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 attcattctatgaccgatgctttgagagcaagcagaacaagt 166
Score = 226 bits (114), Expect = 4e-58
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1536 gtacacttacaaggtctgcccctataaacaggcttctcaggaggagggctattccaccac 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gtacacttacaaggtctgcccctataaacaggcttctcaggaggagggctattccaccac 340
Query: 1596 ccgcttgggtcgctgggacaaatttgaggattcgtacaaagtaatggtattttc 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ccgcttgggtcgctgggacaaatttgaggattcgtacaaagtaatggtattttc 394
>gnl|LJGI|DC595865
Length = 538
Score = 170 bits (86), Expect = 2e-41
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 1787 gtcatgaagaaaagctgaaggaattacaacacaaactagacaaactgaattcggaaatcc 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gtcatgaagaaaagctgaaggaattacaacacaaactagacaaactgaattcggaaatcc 479
Query: 1847 cagaaaaacatgatgagttgtaaaca 1872
||||||||||||||||||||||||||
Sbjct: 478 cagaaaaacatgatgagttgtaaaca 453
>gnl|LJGI|GO023614 similar to UniRef100_A7PJC8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 695
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 305 tttgcgattgttgtgatggaactgatgaatatgatgg 341
||||||||||||||||||| | |||||||||||||||
Sbjct: 393 tttgcgattgttgtgatgggagtgatgaatatgatgg 429