Miyakogusa Predicted Gene
- Lj4g3v0654570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0654570.1 Non Chatacterized Hit- tr|H2ZRQ7|H2ZRQ7_LATCH
Uncharacterized protein (Fragment) OS=Latimeria
chalum,28.41,1e-16,seg,NULL; LACTOSYLCERAMIDE
4-ALPHA-GALACTOSYLTRANSFERASE (ALPHA- 1,4-GALACTOSYLTRANSFERASE),NULL;
Gl,CUFF.47849.1
(590 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g02460.1 772 0.0
Glyma07g34720.1 330 3e-90
Glyma11g10370.1 154 2e-37
Glyma07g17880.1 141 2e-33
Glyma01g28510.1 134 3e-31
Glyma13g31530.1 110 5e-24
Glyma18g42660.1 86 1e-16
Glyma15g07780.1 82 2e-15
Glyma03g09050.1 61 3e-09
Glyma12g02660.1 59 2e-08
>Glyma20g02460.1
Length = 600
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/599 (67%), Positives = 466/599 (77%), Gaps = 35/599 (5%)
Query: 1 MLRSRRRSPYGAYLCAVIXXXXXXXXXXXXXXXXXXXHPPSNHLPRPSLI-HDDDAD--- 56
MLRSRRRSPYGAYLCAVI HP S+HLPRPSL+ H AD
Sbjct: 1 MLRSRRRSPYGAYLCAVISAVLLLFSVSLLYSRLSRSHPHSHHLPRPSLVSHSTSADISI 60
Query: 57 PSTSDPIDELDIIVDENQQEDRP-LHLNTPSSAYFFDPISAAIRRAFLSPPSSIHQWHSF 115
S+ DPIDELD I ++ D P L LN P FFDP+SA++RR+F H HS
Sbjct: 61 ASSDDPIDELDFI---DETLDPPSLRLNPPPYHLFFDPLSASLRRSF-------HHRHS- 109
Query: 116 DNDDN----KFSAPVDRSITAFGSDDVHLHDYLRSKTTPVTSIEDALLLKSSPLRHGWGH 171
DN++N FS DRS TAF SDDV + +RS V +I+DALLLK+SPLR GW
Sbjct: 110 DNNNNFPFQSFSDNDDRSKTAFASDDVPVDFTVRSMAARVATIDDALLLKTSPLREGWSD 169
Query: 172 WFEKKGLFLRKDRMFRSSFDALNPVNNPLLQDPD-GAGVTGFTRGDRILQKWWLNEFKRV 230
WF+KK +FLRKDRMFRS+FD LNP+NNPLLQDPD GA TG TRGDRI+QKWW++EFK+V
Sbjct: 170 WFDKKSVFLRKDRMFRSNFDVLNPLNNPLLQDPDAGAATTGLTRGDRIVQKWWIHEFKKV 229
Query: 231 PFPGNKNPNKLPI---VTKKLGTERKTLNDDENNKGSLG---DIIDDRHHEFRNHIYADG 284
PFPG K L + K+G ER+TLN + NN +II + NH+YADG
Sbjct: 230 PFPGIKKKAPLNVNVNTLTKVGIERRTLNHNHNNNDDDNNNNEIIKEV-----NHVYADG 284
Query: 285 NTWGYFPGLP-LRLSFDDFMEAFFRRGKCVMRVFMVWNSPPWMYTVRYQRGLESLLFHHP 343
+TWGY+PGLP LRLSF DFM+ FFR GKCV RVFMVWNSPPWMYTVR+QRGLESLLFHHP
Sbjct: 285 DTWGYYPGLPRLRLSFSDFMDEFFRLGKCVTRVFMVWNSPPWMYTVRHQRGLESLLFHHP 344
Query: 344 NACVVVFSETIELDFFKDSFVKDGYKVAVVMPNLDQLLKDTPAHIFSSVWFEWRKTKFYP 403
+ACVVVFSET+ELDFFKDSFVKDGYKVAV MPNLD+LLKD PAHIF+SVWFEW+KT FY
Sbjct: 345 DACVVVFSETVELDFFKDSFVKDGYKVAVAMPNLDELLKDMPAHIFASVWFEWKKTNFYS 404
Query: 404 THFSELIRLAALYKYGGIYLDSDIIVWKPISFLNNSVGVEEHAPGAGSALNGAVMAFAKH 463
TH+SELIRLAALYKYGGIYLDSDIIV KPISFLNNSVG+E H GAGSALNGAVM+F +H
Sbjct: 405 THYSELIRLAALYKYGGIYLDSDIIVLKPISFLNNSVGMEGH--GAGSALNGAVMSFPRH 462
Query: 464 SLFIKECMEEFYTTYDDTNLRWNGADLLTRVARKFMGDDNKSIKQLDLKVEPSHIFFPIT 523
SLF+KEC+EEFY TYDDT+LR NGADLLTRVARK++GD+NKS+K L+LKVEPS+IFFP++
Sbjct: 463 SLFVKECLEEFYMTYDDTSLRGNGADLLTRVARKYLGDENKSVKHLELKVEPSYIFFPVS 522
Query: 524 SQNITRYFIAPATETEKAQEDVLLKKIMQESLTFHFWNSLTSALIPEPDSLVTRLMNYA 582
SQNITRYFIAP TETEKAQ+DVLL+ I+ SLTFHFWNS+T +LIPEPDSLV++L+NYA
Sbjct: 523 SQNITRYFIAPTTETEKAQQDVLLENILHNSLTFHFWNSVTFSLIPEPDSLVSKLLNYA 581
>Glyma07g34720.1
Length = 404
Score = 330 bits (846), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/236 (68%), Positives = 192/236 (81%), Gaps = 17/236 (7%)
Query: 354 IELDFFKDSFVKDGYKVAVVMPNLDQLLKDTPAHIFSSVWFEWRKTKFYPTHFSELIRLA 413
+ELDFFK+SFVKDGYKVAV P LD+LLKD PAHIF++VWFEW+KT F TH+SELI LA
Sbjct: 158 VELDFFKESFVKDGYKVAVATPMLDELLKDMPAHIFATVWFEWKKTGFCSTHYSELIHLA 217
Query: 414 ALYKYGGIYLDSDIIVWKPISFLNNSVGVEEHAPGAGSALNGAVMAFAKHSLFIKECMEE 473
ALYKYGGIYLDSDII GAGSALNGAVM+F +HSLFIKEC+EE
Sbjct: 218 ALYKYGGIYLDSDII-----------------GHGAGSALNGAVMSFPRHSLFIKECLEE 260
Query: 474 FYTTYDDTNLRWNGADLLTRVARKFMGDDNKSIKQLDLKVEPSHIFFPITSQNITRYFIA 533
F TYDDT+LR NG D LTRV RK++G++NKS+K L+LKVEPS+IF P++SQNITR FIA
Sbjct: 261 FNMTYDDTSLRGNGVDPLTRVDRKYLGEENKSVKHLELKVEPSYIFIPVSSQNITRSFIA 320
Query: 534 PATETEKAQEDVLLKKIMQESLTFHFWNSLTSALIPEPDSLVTRLMNYACIRCLEL 589
P+TET+KA +DVLL+ I+ SLTFHFWNS+T +LIPEPDSLV++L+NYA I+C EL
Sbjct: 321 PSTETQKALQDVLLENILHNSLTFHFWNSVTFSLIPEPDSLVSKLLNYAFIQCSEL 376
>Glyma11g10370.1
Length = 261
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 120/215 (55%), Gaps = 24/215 (11%)
Query: 38 HPPSNHLPRPSLIHD---DD--ADPSTSDPIDELDIIVDE---------NQQEDRPLHLN 83
HP S SL+ D DD AD T D ID LD++ DE + ++ L N
Sbjct: 44 HPSSRDFNYDSLVSDSGNDDSVADDETLDTIDTLDVVEDEPEDTIDADVDTDDEESLDQN 103
Query: 84 TPSSAYFFDPISAAIRRAFLSPPSSIHQWHSFDNDDNKFSAPVDRSITAFGSDDVHLHDY 143
+S YFF IRRAF S + ++DN+ DRS TAFGSDDV + +
Sbjct: 104 AAASGYFFHHAEGVIRRAF-----SKSSFINYDNNKPFVDPTEDRSKTAFGSDDVAVEEN 158
Query: 144 LRSKTTPVTSIEDALLLKS-----SPLRHGWGHWFEKKGLFLRKDRMFRSSFDALNPVNN 198
+RSK V +EDALLLKS SPLR GWG WF+KK FLRKD+M RS+ + LNP+ N
Sbjct: 159 VRSKAIQVKGVEDALLLKSTGRRVSPLREGWGDWFDKKVDFLRKDKMLRSNLEGLNPLRN 218
Query: 199 PLLQDPDGAGVTGFTRGDRILQKWWLNEFKRVPFP 233
P+LQDPD G+TG T+ DRI++ L + K P
Sbjct: 219 PILQDPDALGLTGITKADRIIRNSLLRDLKTKKLP 253
>Glyma07g17880.1
Length = 319
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 140/287 (48%), Gaps = 25/287 (8%)
Query: 311 KCVMRVFMVWNSPPWMYTVRYQRGLESLLFHHPNACVVVFSETIELDFFKD-----SFVK 365
+C R FM+W SP + R ++S+ HP AC+V+ S T LD + +
Sbjct: 44 ECESRFFMIWESPAGSFGARELMSIDSVFKVHPKACLVILSRT--LDTIRSYRVLKPILD 101
Query: 366 DGYKVAVVMPNLDQLLKDTPAHIFSSVWF-EWRKTKFYP------THFSELIRLAALYKY 418
+G+KV V P+L L K TPA W E +K K P + S LIRLA LYKY
Sbjct: 102 EGFKVQPVTPDLQFLFKGTPAE----AWLNELKKGKKDPGQISLFQNLSNLIRLAVLYKY 157
Query: 419 GGIYLDSDIIVWKPISFLNNSVGVEEHAPGAG--SALNGAVMAFAKHSLFIKECMEEFYT 476
GG+YLD D +V KPIS L NS+G + G + LN AV+ F + + ++EF
Sbjct: 158 GGVYLDIDFVVLKPISLLRNSIGAQSMDAGNKHWTRLNNAVLIFDMNHPLLLRFIDEFVL 217
Query: 477 TYDDTNLRWNGADLLTRVARKFMGDDNKSIKQLDLKVEPSHIFFPITSQNITRYFIAPAT 536
T+D NG L++RV ++ +G+ + + P F+P + I F P T
Sbjct: 218 TFDGNRWGHNGPYLVSRVVKR-LGEK----PGFNFTILPPIAFYPADWKKIGGLFRKPKT 272
Query: 537 ETEKAQEDVLLKKIMQESLTFHFWNSLTSALIPEPDSLVTRLMNYAC 583
+E D L ++ ES H WN + L E S++ RL++ C
Sbjct: 273 RSESKLVDAKLLQLSGESYGVHLWNKESRRLKIEEGSVMERLISNHC 319
>Glyma01g28510.1
Length = 276
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 138/281 (49%), Gaps = 21/281 (7%)
Query: 318 MVWNSPPWMYTVRYQRGLESLLFHHPNACVVVFSETIELDF---FKDSFVKDGYKVAVVM 374
M W SP ++ R +ES+ +HP AC+++ S T++ + G+KV
Sbjct: 1 MTWISPASLFGGRELLSVESIFKNHPKACLIILSRTLDSRHGYRILKPLLDRGFKVQATA 60
Query: 375 PNLDQLLKDTPAHIFSSVWF-EWRKTKFYP------THFSELIRLAALYKYGGIYLDSDI 427
P+L L+K TP WF E RK + P + S LIRLA LYKYGGIY+D+D
Sbjct: 61 PDLSFLVKGTPV----EAWFRELRKGRKDPGEIPLSQNLSNLIRLAVLYKYGGIYIDTDF 116
Query: 428 IVWKPISFLNNSVGVEEHAPGAG--SALNGAVMAFAKHSLFIKECMEEFYTTYDDTNLRW 485
IV KP++ L NS+G + + + LN AV+ F + + EF T+D
Sbjct: 117 IVLKPLTGLRNSIGAQSMNLDSKHWTRLNNAVLIFDIGHQLLHRFINEFALTFDGNKWGH 176
Query: 486 NGADLLTRVARKFMGDDNKSIKQLDLKVEPSHIFFPITSQNITRYFIAPATETEKAQEDV 545
NG L++RV ++ +G + + V P F+P+ I F+ P T+ E +
Sbjct: 177 NGPYLVSRVIKR-LGKRH----DFNFTVLPPMAFYPVDWNKINGLFMKPKTQEESKWVEA 231
Query: 546 LLKKIMQESLTFHFWNSLTSALIPEPDSLVTRLMNYACIRC 586
L ++ +++ H WN +S L E S++ RL + C+ C
Sbjct: 232 KLLQLRRKTYGIHLWNKHSSRLTIEEGSIMGRLASDYCVIC 272
>Glyma13g31530.1
Length = 421
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 138/302 (45%), Gaps = 26/302 (8%)
Query: 299 FDDFMEAFFR--RGKCVMRVFMVWNSPPWMYTVRYQRGLESLLFHHPNACVVVFSETIEL 356
F ++AFF C R FM W S + R +ESL HP AC+V+ S++++
Sbjct: 130 FHARLKAFFNNSHSSCKERFFMTWISSLKGFGERELFSMESLFKSHPEACLVIVSKSLDS 189
Query: 357 DF---FKDSFVKDGYKVAVVMPNLDQLLKDTPAHIFSSVWF-EWRKTKFYPTHFS----- 407
+ FV +G+KV V P+ + KDT A WF ++ P S
Sbjct: 190 NAGTQILKPFVSNGFKVMAVAPDFGYIFKDTHAE----TWFNRLKEGNVDPGEVSLGQNL 245
Query: 408 -ELIRLAALYKYGGIYLDSDIIVWKPISFLNNSVGVE--EHAPGAGSALNGAVMAFAKHS 464
L+RLA LYK+GG Y+D D++V K S L N++G + + G S LN AV+ F K
Sbjct: 246 SNLLRLALLYKFGGTYIDLDVVVLKSFSKLRNTIGAQNFDTKTGKWSRLNNAVLIFDKKH 305
Query: 465 LFIKECMEEFYTTYDDTNLRWNGADLLTRVARKFMGDDNKSIKQLDLKVEPSHIFFPITS 524
+ + +EEF T+D NG L++RV + G + V P F+P+
Sbjct: 306 PLLFKFIEEFALTFDGNKWGHNGPYLISRVVSRVSGRPG-----FNFTVLPPSAFYPVDW 360
Query: 525 QNITRYFIAPATETEKAQEDVLLKKIMQESLTFHFWNSLTSALIPEPDSLVTRLMNYACI 584
+ I F E +++I +ES H WN + L S+V +++ CI
Sbjct: 361 RGIRSLF---RDEISSKWLINKMEQIRKESFAVHLWNRHSRKLKVVKGSIVDSIISSCCI 417
Query: 585 RC 586
C
Sbjct: 418 FC 419
>Glyma18g42660.1
Length = 238
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 311 KCVMRVFMVWNSPPWMYTVRYQRGLESLLFHHPNACVVVFSETIELDFFKDSFVKDGYKV 370
+C ++FM W S + R +ESL HP AC+V+ S T+ DS GY++
Sbjct: 13 RCESQIFMAWESSVGSFGARELLSIESLFKVHPEACLVILSRTL------DSI--HGYRI 64
Query: 371 AVVMPNLDQLLKDTPAHIFSSVWFEWRKTKFYP------THFSELIRLAALYKYGGIYLD 424
+ P LD TPA + + E +K K P + S L+RLAALYKYGG+YLD
Sbjct: 65 --LKPILDGGGGGTPAEAWLN---ELKKGKKDPGEISLFQNLSNLMRLAALYKYGGVYLD 119
Query: 425 SDIIVWKPISFLNNSVGVEEHAPGAG--SALNGAVMAF 460
D++V KP+S L N +G + G + LN AV+ F
Sbjct: 120 IDVVVLKPLSLLRNFIGAQCMDAGNKHWTRLNNAVLIF 157
>Glyma15g07780.1
Length = 225
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 21/188 (11%)
Query: 291 PGLPLRLSFDDFMEAFFRRGK----CVMRVFMVWNSPPWMYTVRYQRGLESLLFHHPNAC 346
P P+ L F ++AFF+ C +R FM W SP + R +E L HP AC
Sbjct: 39 PLFPVPL-FHSRLKAFFKNSSSSSSCKVRFFMTWISPLKAFGERKLFSIEILFGSHPEAC 97
Query: 347 VVVFSETIELDF---FKDSFVKDGYKVAVVMPNLDQLLKDTPAHIFSSVWFEWRKTKFYP 403
+V+ S++++ D FV + +K V P+ + K+T A WF ++ P
Sbjct: 98 LVIVSKSLDSDAGTQILKLFVSNCFKFMAVAPDFGYIFKNTHAE----TWFRLKEGNVDP 153
Query: 404 THFS------ELIRLAALYKYGGIYLDSDIIVWKPISFLNNSVGVEE---HAPGAGSALN 454
S L+RLA LYK+GG Y+D D++V K S L N++G P +GS+LN
Sbjct: 154 GEVSLGQNLSNLLRLALLYKFGGTYIDLDVVVLKSFSKLRNTIGGHRTLMSKPASGSSLN 213
Query: 455 GAVMAFAK 462
AV+ F K
Sbjct: 214 NAVLIFDK 221
>Glyma03g09050.1
Length = 359
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 48/273 (17%)
Query: 323 PPWMYTVRYQRGLESLLFHHPNACVVVFSETIELDF---FKDSFVKDGYKVAVVMPNLDQ 379
P ++ R +ES+ +HP AC+ + S T++ + +KV + P+L
Sbjct: 112 PASLFGGRELLPVESIFKNHPKACLTILSRTLDTKHGYRILKPLLDRRFKVQAMAPDLPF 171
Query: 380 LLKDTPAHIFSSVWF-EWRKTKFYPT------HFSELIRLAALYKYGGIYLDSDIIVWKP 432
L+K TP WF E RK + P+ + S LIRLA Y
Sbjct: 172 LVKGTPV----EAWFRELRKGRKDPSEIPLSQNLSNLIRLAIHTLY-------------- 213
Query: 433 ISFLNNSVGVEEHAPGAG-SALNGAVMAFAKHSLFIKECMEEFYTTYDDTNLRWNGADLL 491
NS+G + G + LN AV+ F + EF T++ NG L+
Sbjct: 214 ---FINSIGAQSMNSGKHWTRLNNAVLIFDIGHPLRHRFINEFALTFNGNKWGNNGPYLV 270
Query: 492 TRVARKFMGDDNKSIKQLDLKVEPSHIFFPITSQNITRYFIAPATETEKAQEDVLLKKIM 551
+RV ++ + + + P F+P+ I ++ + + ++L ++
Sbjct: 271 SRVIKRLFKRHD-----FNFTILPPMAFYPVDWNKI---------KSRRVEANLL--QLS 314
Query: 552 QESLTFHFWNSLTSALIPEPDSLVTRLMNYACI 584
++ H WN +S L E S++ RL++ C+
Sbjct: 315 GKTYGIHLWNKHSSRLTIEDGSVIGRLISDYCV 347
>Glyma12g02660.1
Length = 59
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 129 SITAFGSDDVHLHDYLRSKTTPVTSIEDALLLK-----SSPLRHGWGHWFEKK 176
S TAFGS+D + + +RSK V +EDALLLK SPLR GWG WF+KK
Sbjct: 1 SKTAFGSNDFAVEENVRSKAIQVQGVEDALLLKIMGSRVSPLREGWGDWFDKK 53