Miyakogusa Predicted Gene
- Lj4g3v0654370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0654370.1 Non Chatacterized Hit- tr|G7IU33|G7IU33_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,39.26,0.00000000000001,FAMILY NOT NAMED,NULL; seg,NULL;
Frigida,Frigida-like; FAR1,FAR1 DNA binding domain;
coiled-coil,NUL,NODE_91742_length_2086_cov_9.027804.path1.1
(1677 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024999 UniRef100_Q3LX78 Cluster: Envelope glycoprotei... 323 2e-87
gnl|LJGI|TC66034 270 3e-71
gnl|LJGI|TC63372 182 5e-45
>gnl|LJGI|GO024999 UniRef100_Q3LX78 Cluster: Envelope glycoprotein; n=1; Human
immunodeficiency virus 1|Rep: Envelope glycoprotein -
Human immunodeficiency virus 1, partial (8%)
Length = 687
Score = 323 bits (163), Expect = 2e-87
Identities = 232/255 (90%)
Strand = Plus / Plus
Query: 938 gattcatttgtgcatttaagttggtggacaagaatcaaccagttgatctcttgcgagaat 997
||||||||||||||| |||| |||||||||| || || ||||||||||| ||||||||||
Sbjct: 2 gattcatttgtgcatataagctggtggacaataaccagccagttgatctattgcgagaat 61
Query: 998 atgtgcagaatgcaaaacggatttctgagatcagttgcaagaataccaactctcttgaaa 1057
| |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 62 acgtgcagaatgcaaaactgatttctgagatcagttgcaagaacaccaactcccttgaaa 121
Query: 1058 tcaaggataaggccagagatcatgaaattgccactttgacaaatgttctacaatgcattt 1117
|||||||||||| ||||||||| ||||| || |||||||||||||||||| | |||||||
Sbjct: 122 tcaaggataaggtcagagatcaagaaatggcaactttgacaaatgttctagagtgcattt 181
Query: 1118 cagacaacaacctggaatctgaggatctttttgatgagattaaagatcgcattcttgagc 1177
||||||||||||| ||||||| |||||| || |||||||| ||||||||||||||||||
Sbjct: 182 cagacaacaacctagaatctggggatctaattaatgagattgaagatcgcattcttgagc 241
Query: 1178 taaataagcagaagg 1192
||| |||||||||||
Sbjct: 242 taagtaagcagaagg 256
>gnl|LJGI|TC66034
Length = 677
Score = 270 bits (136), Expect = 3e-71
Identities = 268/312 (85%)
Strand = Plus / Plus
Query: 859 cagaccctgggttttgtagataaaatctctgattttgttcagaaacttattaacaaacag 918
|||||||||||||| ||| ||| |||||||||||||||||| |||||||| || ||
Sbjct: 2 cagaccctgggtttcacagacaaagtctctgattttgttcagagccttattaagaaggag 61
Query: 919 cagtatattgaagctgttagattcatttgtgcatttaagttggtggacaagaatcaacca 978
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 62 tagtattttgaagctgttagattcatttgtgcatttaagttggaagacaagaatcaacct 121
Query: 979 gttgatctcttgcgagaatatgtgcagaatgcaaaacggatttctgagatcagttgcaag 1038
|||||||||||||| |||| | |||||||||||||| |||||||| | || |||||||
Sbjct: 122 gttgatctcttgcggaaatacgcgcagaatgcaaaactgatttctgggcgcatttgcaag 181
Query: 1039 aataccaactctcttgaaatcaaggataaggccagagatcatgaaattgccactttgaca 1098
|| |||| |||||||||||||||||| | ||||||||||| |||||||| | ||| |
Sbjct: 182 aacaccatgtctcttgaaatcaaggatgatgccagagatcaagaaattgctagcctgaaa 241
Query: 1099 aatgttctacaatgcatttcagacaacaacctggaatctgaggatctttttgatgagatt 1158
| ||||| ||||||||||||||||||||| || |||||||||||||| || ||||||||
Sbjct: 242 agtgttcaacaatgcatttcagacaacaatctagaatctgaggatctaattaatgagatt 301
Query: 1159 aaagatcgcatt 1170
|| ||||||||
Sbjct: 302 caacatcgcatt 313
>gnl|LJGI|TC63372
Length = 728
Score = 182 bits (92), Expect = 5e-45
Identities = 235/285 (82%), Gaps = 12/285 (4%)
Strand = Plus / Plus
Query: 896 ttcagaaacttattaacaaacagcagtatattgaagctgttagattcatttgtgcattta 955
||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 13 ttcagaaccttgttaagaagcagcaacatattgaagctgttagattcatttgtgcattta 72
Query: 956 agttggtggacaagaatcaaccagttgatctcttgcgagaatatgtgcagaatgcaaaac 1015
| || | |||||||||||||| || ||||||||| | |||| |||||||||||||||
Sbjct: 73 aattagctgacaagaatcaacctgtcgatctcttgtggaaatacatgcagaatgcaaaac 132
Query: 1016 ggatttctgagatcagttgcaagaataccaactctcttgaaatcaaggataaggccagag 1075
| ||||||||| || ||| ||| ||||||||| |||||||||||||||
Sbjct: 133 tggtttctgagaaca------------ccacctcccttgaaatccaggataaggccagag 180
Query: 1076 atcatgaaattgccactttgacaaatgttctacaatgcatttcagacaacaacctggaat 1135
|||| ||| |||||||||||||||||||||||| | ||||||||||||||| | ||||
Sbjct: 181 atcaagaagttgccactttgacaaatgttctactgtccatttcagacaacaagttagaat 240
Query: 1136 ctgaggatctttttgatgagattaaagatcgcattcttgagctaa 1180
||| || ||| || |||||||| ||||||||||||||||||||
Sbjct: 241 ctgtgggtctacttaatgagattcgagatcgcattcttgagctaa 285