Miyakogusa Predicted Gene
- Lj4g3v0537650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0537650.1 tr|G7JMJ4|G7JMJ4_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g0,80.22,0,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; no description,Tetratricopeptide-like
,CUFF.47575.1
(717 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 358 8e-99
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 9e-99
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 355 5e-98
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 6e-96
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 7e-96
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 2e-95
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 2e-94
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 6e-93
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 336 3e-92
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 336 3e-92
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 5e-92
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 330 3e-90
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 328 6e-90
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 3e-89
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 7e-89
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 323 2e-88
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 320 3e-87
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 317 1e-86
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 7e-86
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 4e-85
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 309 4e-84
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 309 5e-84
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 8e-84
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 306 2e-83
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 305 6e-83
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 304 2e-82
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 7e-82
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 301 1e-81
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 4e-80
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 6e-80
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 1e-79
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 9e-79
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 2e-78
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 2e-78
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 289 4e-78
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 288 8e-78
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 286 3e-77
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 283 4e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 7e-76
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 7e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 2e-75
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 279 4e-75
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 7e-75
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 276 3e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 1e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 273 3e-73
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 2e-72
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 8e-72
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 268 1e-71
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 268 1e-71
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 7e-71
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 1e-70
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 256 3e-68
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 8e-68
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 1e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 254 2e-67
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 5e-67
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 2e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 249 6e-66
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 3e-65
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 246 4e-65
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 245 9e-65
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 243 5e-64
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 7e-64
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 8e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 2e-63
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 1e-61
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 8e-61
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 229 5e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 217 2e-56
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 213 5e-55
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 6e-55
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 9e-55
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 210 2e-54
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 204 2e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 4e-51
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 1e-50
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 4e-48
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 7e-44
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 120 5e-27
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 117 4e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 6e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 7e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 8e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 97 4e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 5e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 97 6e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 6e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 94 4e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 89 1e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-17
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 1e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 5e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 79 1e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 3e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 5e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 69 1e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 67 5e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 6e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 7e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 63 9e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 2e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 53 6e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 53 6e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 2e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/638 (32%), Positives = 352/638 (55%), Gaps = 21/638 (3%)
Query: 68 VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHS 127
+ WN IS Y + GR +EAL + M R + +S++ ++S R+G L ++
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARK--- 116
Query: 128 LLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGN 187
L E+ + + ++ VR +G+A +FE + + + W+ MLSGY Q + +
Sbjct: 117 -LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDD 175
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR-IC 246
A +F +MP ++ V+W L+S Y + E A LF+ ++ + +C++
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSK-MEEACMLFKSRENWALV----SWNCLLGGFV 230
Query: 247 ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA 306
+ + A + + ++D + ++ I G Y ID+A+++++ +
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITG-----YAQSGKIDEARQLFDESPVQDVF-TW 284
Query: 307 NSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT 366
+++ G I +EEA +F + E N +S+N M+ GY ++E +K LF+ M +N++
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 367 SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
+ NTMI+ Y++ G++ EA LFDK +R+ V+W +M++GY +G EAL+L+V M R
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+RS+FS C + + + G+ LH L K ++ +VG AL+ Y KCG + +A
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 487 QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHA 546
F + ++ +W +I GY+ HG G ++ F SM +G+ P+ AT VA+LSACSH
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 547 GLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGA 606
GL++ G + F++M Y V P +HY C+VDLLGR+G L++A + MP E D IWG
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 607 LLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLEL 666
LL AS + E+ E AA+K+F+++P +V+LSN+YA GRWG +R R++ +
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 667 RKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
+K PG SWIE+ N H FSV D+ H D I+A ++ L
Sbjct: 644 KKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 237/542 (43%), Gaps = 101/542 (18%)
Query: 16 RVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMI 75
R +F L L D P ++S N+ I + L +AR +F+ MP R V SWNTM+
Sbjct: 107 RNGEFELARKLF-DEMPER-DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 76 SGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE 135
SGY+Q G D+A ++ M N++S++A+LS+ ++ K + +L E
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQN-----SKMEEACMLFKSRE 215
Query: 136 KFGLVG-SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGK 194
+ LV + LL V+ I EA F+ + + V W+ +++GY Q + A LF +
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 195 MPVRDVVAWTTLISGYARREDGCERALDLFRCM-RRSEVLPNEFTLDCVIRICARLGALH 253
PV+DV WT ++SGY + E A +LF M R+EV N A+
Sbjct: 276 SPVQDVFTWTAMVSGYIQNR-MVEEARELFDKMPERNEVSWN---------------AML 319
Query: 254 AGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA--NSLIG 311
AG Y + ++ AK +++ M C NV+ N++I
Sbjct: 320 AG-------------------------YVQGERMEMAKELFDVM---PCRNVSTWNTMIT 351
Query: 312 GLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTS 367
G G+I EA+ +F + + +P+S+ MI GY+ S ++ RLF +M + N +S
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 368 L-----------------------------------NTMISVYSKNGELDEAVKLFDKTK 392
N ++ +Y K G ++EA LF +
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 393 GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG- 451
G ++ V+WN+M++GY +G AL+ + +M+R + +T + AC+ +G
Sbjct: 472 G-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 452 QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAY 510
Q + N +VD + G L DA ++ F P+ A W L+
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 511 HG 512
HG
Sbjct: 591 HG 592
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 152/336 (45%), Gaps = 40/336 (11%)
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
G++ + N I + GR EA +F + + +SYN MI GY + + E +++LF+
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 359 KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALK 418
+M ++L S N MI Y +N L +A +LF+ ER+ +WN+M+SGY NG +A
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFE-IMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 419 LYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYS 478
++ M + + +++ L A ++ +L K+ + L+ +
Sbjct: 179 VFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLF----KSRENWALVSWNCLLGGFV 230
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
K + +A++ F S+ +V +W +I GYA G E+ LF VQ V T+ A
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF----TWTA 286
Query: 539 ILSACSHAGLLNDGLEIFHSM------------------------QICYRVTP--TIEHY 572
++S ++ + E+F M + + V P + +
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
++ + G++ EA+ ++MP + D V W A++
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/719 (29%), Positives = 373/719 (51%), Gaps = 52/719 (7%)
Query: 7 FCPVRNCCKRVEKF----RLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDE 62
F V + CK++E +L +L+ +V + +S+ G L A H+F
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH--LGNLISAEHIFSN 348
Query: 63 MPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLG 122
M R ++NT+I+G SQ G ++A+ L MH ++ + + ++++ +C+ G+LF G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 123 KQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQR 182
+Q+H+ K GF + ALL +C I
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIE--------------------------- 441
Query: 183 DMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCV 242
A+D F + V +VV W ++ Y +D + +FR M+ E++PN++T +
Sbjct: 442 ----TALDYFLETEVENVVLWNVMLVAYGLLDD-LRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC 302
++ C RLG L G+ +H IK + + L + Y +D A + G+
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 303 LNVANSLIGGLILMGRIEEA-----ELIFYGLRE-----TNPISYNLMIKGYAMSSQIEK 352
++ ++I G ++A +++ G+R TN +S ++ QI
Sbjct: 557 VS-WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 353 SKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
+ +L N ++++YS+ G+++E+ F++T+ N + WN+++SG+ +G
Sbjct: 616 QACV--SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 672
Query: 413 HSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTA 472
+ EAL+++V M R +D++ TF +A + + +QG+ +HA ++KT + + V A
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 473 LVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPN 532
L+ Y+KCG ++DA++ F + + N +W A+IN Y+ HG GSE++ F M+ V PN
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 533 AATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFI 592
T V +LSACSH GL++ G+ F SM Y ++P EHY CVVD+L R+G L A+EFI
Sbjct: 793 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFI 852
Query: 593 NQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWG 652
+MPI+ D ++W LL+A K++E+GE AA L L+P + +V+LSN+YA+ +W
Sbjct: 853 QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWD 912
Query: 653 QKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
+ R++++ ++K+PG SWIE+ N+IH F V D+ H +D I+ LT + I
Sbjct: 913 ARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/570 (24%), Positives = 247/570 (43%), Gaps = 47/570 (8%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G+L A +FDEMP RT+ +WN MI + E L M V NE +FS VL
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 111 SSCARSGSLFLG--KQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
+C R GS+ +Q+H+ +L G +V + L+ R + A VF+ LR +
Sbjct: 194 EAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
H W M+SG + + A+ LF M V
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLG----------------------------- 283
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
++P + V+ C ++ +L G+ +HGL +K G D + AL Y +
Sbjct: 284 ---IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF--YGLRETNPISYNL--MIKGY 344
A+ ++ +M + N+LI GL G E+A +F L P S L ++
Sbjct: 341 SAEHIFSNMSQRDAVTY-NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 345 AMSSQIEKSKRLFEKMAPKNLTSLN----TMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
+ + + ++L S N ++++Y+K +++ A+ F +T+ E N V W
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLW 458
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
N M+ Y + +++ M+ + ++ T+ + + C L + G+ +H+ + K
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILL 520
T FQ N YV + L+D Y+K G L A +V +WT +I GY + +++
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 521 FRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
FR ML +G+ + +SAC+ L +G +I H+ + + +V L
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYS 637
Query: 581 RSGRLKEAEEFINQMPIEADGVIWGALLNA 610
R G+++E+ Q D + W AL++
Sbjct: 638 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 666
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 216/514 (42%), Gaps = 73/514 (14%)
Query: 99 VKLNEISFSAVLSSCARS-GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
++ N + +L C ++ GSL G+++HS +LK G + G + L F
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF---------- 129
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
Y+ + + A +F +MP R + W +I A R
Sbjct: 130 ---------------------YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIG 168
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLG--ALHAGKVVHGLCIKDGLDFDNSIGG 275
E LF M V PNE T V+ C R G A + +H + GL +
Sbjct: 169 E-VFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE-EAELI-----FYGL 329
L + Y +D A+RV++ + L +S + + + + E EAE I Y L
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLR----LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL-------------NTMISVYS 376
+M YA SS + K++ + L L N ++S+Y
Sbjct: 283 --------GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
G L A +F +R++VT+N++++G G +A++L+ M ++ +T +
Sbjct: 335 HLGNLISAEHIFSNM-SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
L AC++ + +GQ LHA+ +K F +N + AL++ Y+KC + A F
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
NV W ++ Y S +FR M ++ ++PN T+ +IL C G L G +I
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI- 512
Query: 557 HSMQICYRVTPTIEHYTC--VVDLLGRSGRLKEA 588
HS I + + Y C ++D+ + G+L A
Sbjct: 513 HSQII--KTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 193/399 (48%), Gaps = 20/399 (5%)
Query: 232 VLPNEFTLDCVIRICARL-GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+ PN TL ++ C + G+L G+ +H +K GLD + + L +FY + + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKG------- 343
+V++ M E + N +I L I E +F + N G
Sbjct: 140 FKVFDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 344 ----YAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
+ + QI ++ L++ + + N +I +YS+NG +D A ++FD + + +S +
Sbjct: 199 GSVAFDVVEQIH-ARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHS-S 255
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
W +M+SG N +EA++L+ M L + + FS + AC + S + G+ LH +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
K F ++ YV ALV Y G+L A+ F+++ + + LING + G G +++
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF-HSMQICYRVTPTIEHYTCVVDL 578
LF+ M + G+ P++ T +++ ACS G L G ++ ++ ++ + IE +++L
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNL 433
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDI 617
+ ++ A ++ + +E + V+W +L A D+
Sbjct: 434 YAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDL 471
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 343/650 (52%), Gaps = 50/650 (7%)
Query: 106 FSAVLSSCARSG-SLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
F+ +L SC +S S + VH+ ++KSGF + + L+ +C + + VF+++
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
N W+ +++G + + A LF MP RD W +++SG+A+ D CE AL F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH-DRCEEALCYF 140
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
M + + NE++ V+ C+ L ++ G VH L K D IG AL + Y
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIG---------------GLILMGRIEEAELIFYGL 329
++DA+RV++ MG ++ NSLI ++L R+E E+ +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVS-WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 330 -------------------------RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN 364
+ I N + YA S+I++++ +F+ M +N
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 365 LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
+ + +MIS Y+ A +F K ERN V+WN++++GY NG++ EAL L+ ++
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKM-AERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF------QANVYVGTALVDFYS 478
R SV + +F+ + +AC L G H H+ K F + +++VG +L+D Y
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
KCG + + F + + +W A+I G+A +G G+E++ LFR ML G P+ T +
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+LSAC HAG + +G F SM + V P +HYTC+VDLLGR+G L+EA+ I +MP++
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIR 658
D VIWG+LL A ++I +G+ AEKL ++P+ +V+LSNMYA LG+W +R
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 659 KRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATI 708
K ++ + K PGCSWI++ + H+F V+DK+H I++ +D L A +
Sbjct: 619 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 240/534 (44%), Gaps = 89/534 (16%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL 88
D P ++ + N + K G L EA +F MP R +WN+M+SG++Q R +EAL
Sbjct: 79 DKMPQR-NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
+ MH+ LNE SF++VLS+C+ + G QVHSL+ KS F +GSAL+
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
+C + +A+ VF+E+ D N V W+ +++ + Q G A++
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN---GPAVE------------------ 236
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIK-DGL 267
ALD+F+ M S V P+E TL VI CA L A+ G+ VHG +K D L
Sbjct: 237 -----------ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY 327
D + A + Y I +A+ +++SM + S+I G + + A L+F
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI-AETSMISGYAMAASTKAARLMFT 344
Query: 328 GLRETNPISYNLMIKGYAMSSQIEKSKRLF-----EKMAPK------------NLTSL-- 368
+ E N +S+N +I GY + + E++ LF E + P +L L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404
Query: 369 --------------------------NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNS 402
N++I +Y K G ++E +F K ER+ V+WN+
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM-ERDCVSWNA 463
Query: 403 MMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK-- 460
M+ G+ NG +EAL+L+ M T + AC ++G+ + +++
Sbjct: 464 MIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDF 523
Query: 461 --TPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
P + + T +VD + G L +A+ + P+ W +L+ H
Sbjct: 524 GVAPLRDHY---TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 199/434 (45%), Gaps = 72/434 (16%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+K G + +A+ +FDEM R V SWN++I+ + Q G EAL + M S V+ +E++ +
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLV-GSALLYFCVRCCGIGEAELVFEELRD 166
+V+S+CA ++ +G++VH ++K+ + ++ +A + +C I EA +F+ +
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N + + M+SGY A +F KM R+VV+W LI+GY + + E AL LF
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN-EEALSLFCL 376
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
++R V P ++ +++ CA L LH G H +K G F +
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS--------------- 421
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAM 346
G E + V NSLI + G +EE L+F + E + +S+N MI G+A
Sbjct: 422 -----------GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 347 SSQIEKSKRLFEKM-----APKNLTSLNT------------------------------- 370
+ ++ LF +M P ++T +
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRD 530
Query: 371 ----MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG-YIHNGQHSEALKLYVTMRR 425
M+ + + G L+EA + ++ + +SV W S+++ +H + L YV +
Sbjct: 531 HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH---RNITLGKYVAEKL 587
Query: 426 LSVDHSRSTFSVLF 439
L V+ S S VL
Sbjct: 588 LEVEPSNSGPYVLL 601
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 1 MILFLRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMF 60
+IL F + C R+++ R + DS P +VI+ I+ A AR MF
Sbjct: 289 IILSNAFVDMYAKCSRIKEARF----IFDSMPIR-NVIAETSMISGYAMAASTKAARLMF 343
Query: 61 DEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLF 120
+M R V SWN +I+GY+Q G +EAL+L + R V SF+ +L +CA L
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
Query: 121 LGKQVHSLLLKSGF------EKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
LG Q H +LK GF E VG++L+ V+C + E LVF ++ + + V W+
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNA 463
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLP 234
M+ G+ Q +GY AL+LFR M S P
Sbjct: 464 MIIGFAQ--------------------------NGYGN------EALELFREMLESGEKP 491
Query: 235 NEFTLDCVIRICARLGALHAGK 256
+ T+ V+ C G + G+
Sbjct: 492 DHITMIGVLSACGHAGFVEEGR 513
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 213/681 (31%), Positives = 362/681 (53%), Gaps = 60/681 (8%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G+ +FD + R SWN++IS + +++ AL M V+ + + +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 109 VLSSCAR---SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
V+++C+ L +GKQVH+ L+ G EL
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKG-----------------------------EL- 234
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
N + + +++ Y + + ++ L G RD+V W T++S + E E AL+ R
Sbjct: 235 --NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE-ALEYLR 291
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDNSIGGALAEFYCDR 284
M V P+EFT+ V+ C+ L L GK +H +K+G LD ++ +G AL + YC+
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-----NPISYNL 339
+ +RV++ M + + N++I G +EA L+F G+ E+ N +
Sbjct: 352 KQVLSGRRVFDGMFDRK-IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGER 395
++ S + + + + + L NT++ +YS+ G++D A+++F K + +R
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DR 469
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMR-----------RLSVDHSRSTFSVLFRACTS 444
+ VTWN+M++GY+ + H +AL L M+ R+S+ + T + +C +
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 445 LCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTAL 504
L + +G+ +HA+ K +V VG+ALVD Y+KCG L +++ F I NV W +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 505 INGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYR 564
I Y HG G E+I L R M+VQGV PN TF+++ +ACSH+G++++GL IF+ M+ Y
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYG 649
Query: 565 VTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGV-IWGALLNASWFWKDIEVGERA 623
V P+ +HY CVVDLLGR+GR+KEA + +N MP + + W +LL AS ++E+GE A
Sbjct: 650 VEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIA 709
Query: 624 AEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHM 683
A+ L L+PN S +V+L+N+Y+ G W + T +R+ ++ +RK+PGCSWIE + +H
Sbjct: 710 AQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 769
Query: 684 FSVEDKTHAYSDVIYATVDHL 704
F D +H S+ + ++ L
Sbjct: 770 FVAGDSSHPQSEKLSGYLETL 790
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 232/544 (42%), Gaps = 59/544 (10%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N +A K G+LA ++ + R + +WNT++S Q + EAL M V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG-FEKFGLVGSALLYFCVRCCGIGEAEL 159
+E + S+VL +C+ L GK++H+ LK+G ++ VGSAL+ C +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
VF+ + D LW+ M++GY Q + A+ LF G E
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF----------------------IGMEE 397
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
+ L L N T+ V+ C R GA + +HG +K GLD D + L +
Sbjct: 398 SAGL---------LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR--------- 330
Y ID A R++ M L N++I G + E+A L+ + ++
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRD-LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 331 ------ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL----NTMISVYSKNGE 380
+ N I+ ++ A S + K K + NL + + ++ +Y+K G
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
L + K+FD+ ++N +TWN ++ Y +G EA+ L M V + TF +F
Sbjct: 568 LQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 441 ACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP--N 497
AC+ +G ++ + + + +VD + G + +A + +
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 686
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT-FVAILSACSHAGLLNDGLEIF 556
AW++L+ H E + L+Q + PN A+ +V + + S AGL + E+
Sbjct: 687 AGAWSSLLGASRIHN-NLEIGEIAAQNLIQ-LEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 557 HSMQ 560
+M+
Sbjct: 745 RNMK 748
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 138/629 (21%), Positives = 261/629 (41%), Gaps = 65/629 (10%)
Query: 8 CPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRT 67
CP+ F + LL S HP+++ + A ++ A +F R+
Sbjct: 3 CPLAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQS-RS 61
Query: 68 VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHS 127
W ++ + EA+ M +K + +F A+L + A + LGKQ+H+
Sbjct: 62 PEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 128 LLLKSGFEKFGL-VGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMG 186
+ K G+ + V + L+ +C G VF+ + +
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-------------------- 161
Query: 187 NAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRIC 246
R+ V+W +LIS E E AL+ FRCM V P+ FTL V+ C
Sbjct: 162 -----------RNQVSWNSLISSLCSFEK-WEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 247 ARLG---ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
+ L L GK VH ++ G + ++ I L Y + +K + S GG L
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD-L 267
Query: 304 NVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
N+++ L ++ EA E++ G+ E + + + ++ + + K L
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 359 KMAPKNLTSLNT-----MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH 413
N+ ++ +Y ++ ++FD +R WN+M++GY N
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHD 385
Query: 414 SEALKLYVTMRRLS-VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTA 472
EAL L++ M + + + +T + + AC +F + + +H + K + +V
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 473 LVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM------LV 526
L+D YS+ G + A R F + ++ W +I GY + +++LL M +
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 527 QG-----VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGR 581
+G + PN+ T + IL +C+ L G EI H+ I + + + +VD+ +
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAK 564
Query: 582 SGRLKEAEEFINQMPIEADGVIWGALLNA 610
G L+ + + +Q+P + + + W ++ A
Sbjct: 565 CGCLQMSRKVFDQIP-QKNVITWNVIIMA 592
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 214/722 (29%), Positives = 357/722 (49%), Gaps = 109/722 (15%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
E H + +STN I+ KTG+++ AR +FD MP RTV +W ++ Y++ +DEA L
Sbjct: 73 EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKL 132
Query: 91 ASFMHR--SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE--KFGLVGSALLY 146
M R SC + ++F+ +L C + QVH+ +K GF+ F V + LL
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLK 192
Query: 147 FCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL 206
+ A ++FEE+ + + V ++ +++GY + + ++ LF K
Sbjct: 193 SYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK------------ 240
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
MR+S P++FT V++ L G+ +H L + G
Sbjct: 241 --------------------MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF 326
D S+G + +FY D R+ E ++F
Sbjct: 281 FSRDASVGNQILDFYSKHD--------------------------------RVLETRMLF 308
Query: 327 YGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA-----------------PKNLTSL- 368
+ E + +SYN++I Y+ + Q E S F +M NL+SL
Sbjct: 309 DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 369 ---------------------NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY 407
N+++ +Y+K +EA +F K+ +R +V+W +++SGY
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF-KSLPQRTTVSWTALISGY 427
Query: 408 IHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANV 467
+ G H LKL+ MR ++ +STF+ + +A S S G+ LHA + ++ NV
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENV 487
Query: 468 YVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ 527
+ G+ LVD Y+KCG + DA + F + N +W ALI+ +A +G G +I F M+
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 528 GVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKE 587
G+ P++ + + +L+ACSH G + G E F +M Y +TP +HY C++DLLGR+GR E
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 588 AEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDP-NPISGFVILSNMYA 646
AE+ +++MP E D ++W ++LNA K+ + ERAAEKLFS++ + +V +SN+YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 647 ILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTA 706
G W + ++K ++ ++K P SW+E+N+ IH+FS D+TH D I ++ LTA
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 707 TI 708
I
Sbjct: 728 EI 729
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 250/544 (45%), Gaps = 24/544 (4%)
Query: 116 SGSLFLG-KQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
S + FL ++V + ++K+GF+ + ++ +R + A V++E+ N V +
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE--V 232
M+SG+V+ + +A DLF MP R VV WT L+ YAR + A LFR M RS
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSH-FDEAFKLFRQMCRSSSCT 143
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN--SIGGALAEFYCDRDAIDDA 290
LP+ T ++ C +A VH +K G D + ++ L + YC+ +D A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKG------- 343
++E + + + N+LI G G E+ +F +R++ + G
Sbjct: 204 CVLFEEIPEKDSVTF-NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 344 ---YAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
+A+ Q+ ++ + N ++ YSK+ + E LFD+ E + V++
Sbjct: 263 LHDFALGQQLHALS--VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSY 319
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
N ++S Y Q+ +L + M+ + D F+ + +L S Q G+ LH
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILL 520
+ ++VG +LVD Y+KC +A+ F S+ +WTALI+GY GL + L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 521 FRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
F M + + +TF +L A + L G ++ H+ I + + +VD+
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQL-HAFIIRSGNLENVFSGSGLVDMYA 498
Query: 581 RSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS--LDPNPISGF 638
+ G +K+A + +MP + + V W AL++A D E A K+ L P+ +S
Sbjct: 499 KCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 639 VILS 642
+L+
Sbjct: 558 GVLT 561
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 355 bits (912), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/672 (31%), Positives = 345/672 (51%), Gaps = 91/672 (13%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
+ N+ I H ++ G++ EAR +FD +++SSWN+M++GY A+ M R
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-----------FANLMPRDA 67
Query: 99 VKL-NEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
KL +E+ ++S L SG+ K G I EA
Sbjct: 68 RKLFDEMPDRNIISWNG---------------LVSGYMKNG--------------EIDEA 98
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY---ARRE 214
VF+ + + N V W+ ++ GYV + A LF KMP ++ V+WT ++ G+ R +
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRID 158
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
D C + E++P++ D + R ++HGLC K+G
Sbjct: 159 DAC----------KLYEMIPDK---DNIART----------SMIHGLC-KEG-------- 186
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
+D+A+ +++ M E + +++ G R+++A IF + E
Sbjct: 187 -----------RVDEAREIFDEMS-ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
Query: 335 ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
+S+ M+ GY + +IE ++ LFE M K + + N MIS + GE+ +A ++FD K E
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK-E 293
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
RN +W +++ + NG EAL L++ M++ V + T + C SL S G+ +
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
HA L + F +VYV + L+ Y KCG L ++ F S ++ W ++I+GYA HGLG
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 515 SESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYT 573
E++ +F M + G PN TFVA LSACS+AG++ +GL+I+ SM+ + V P HY
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 574 CVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPN 633
C+VD+LGR+GR EA E I+ M +E D +WG+LL A ++V E A+KL ++P
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Query: 634 PISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVED-KTHA 692
+++LSNMYA GRW +RK +++ +RK PGCSW E+ N +H F+ +H
Sbjct: 534 NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHP 593
Query: 693 YSDVIYATVDHL 704
+ I +D L
Sbjct: 594 EQESILKILDEL 605
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 192/436 (44%), Gaps = 72/436 (16%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
++IS N ++ K GE+ EAR +FD MP R V SW ++ GY G+ D A +L M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL----------LKSGFEKFGLVGSA-- 143
N++S++ +L + G + +++ ++ + G K G V A
Sbjct: 138 EK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 144 ---------LLYFCVRCCGIGE------AELVFEELRDGNHVLWSLMLSGYVQRDMMGNA 188
++ + G G+ A +F+ + + V W+ ML GYVQ + +A
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 189 MDLFGKMPVRDVVAWTTLISGY--------ARR---------------------EDGCE- 218
+LF MPV+ V+A +ISG ARR +G E
Sbjct: 254 EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
ALDLF M++ V P TL ++ +CA L +LH GK VH ++ D D + L
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETN 333
Y + +K +++ + + + NS+I G G EEA E+ G + N
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDII-MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPN 432
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTS-LNTMISVYSKNGELDEAVKLF 388
+++ + + + +E+ +++E M K +T+ M+ + + G +EA+++
Sbjct: 433 EVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 389 DKTKGERNSVTWNSMM 404
D E ++ W S++
Sbjct: 493 DSMTVEPDAAVWGSLL 508
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 181/423 (42%), Gaps = 60/423 (14%)
Query: 32 PHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALA 91
P P VI+ N I+ + GE+A+AR +FD M R +SW T+I + + G EAL L
Sbjct: 261 PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
M + V+ + ++LS CA SL GKQVH+ L++ F+ V S L+ ++C
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
+ +++L+F+ + ++W+ ++SGY + A+ +F +MP +SG
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP----------LSGST 429
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
+ PNE T + C+ +AG V GL I + ++
Sbjct: 430 K---------------------PNEVTFVATLSACS-----YAGMVEEGLKIYESMESVF 463
Query: 272 SIGGALAEFYCDRDAIDDAKRVYE------SMGGEACLNVANSLIGGLILMGRIEEAELI 325
+ A + C D + A R E SM E V SL+G +++ AE
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 326 FYGLRETNPI---SYNLMIKGYAMS------SQIEK--SKRLFEKMAPKNLTSLNTMISV 374
L E P +Y L+ YA +++ K RL K + T + +
Sbjct: 524 AKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Query: 375 YSKNG-----ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALK-LYVTMRRLSV 428
+++ G E + +K+ D+ G +N S +H+ E + L RL+V
Sbjct: 584 FTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAV 643
Query: 429 DHS 431
++
Sbjct: 644 AYA 646
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 58/341 (17%)
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
P + N+ I + +I ++++LF+ K+++S N+M++ Y N +A KLFD+
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP- 75
Query: 394 ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQL 453
+RN ++WN ++SGY+ NG+ EA K++ M
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMP----------------------------- 106
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
+ NV TALV Y G + A+ F + N +WT ++ G+ G
Sbjct: 107 ----------ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGR 156
Query: 514 GSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYT 573
++ L+ + + N A I C G +++ EIF M +T +T
Sbjct: 157 IDDACKLYEMIPDKD---NIARTSMIHGLCKE-GRVDEAREIFDEMSERSVIT-----WT 207
Query: 574 CVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPN 633
+V G++ R+ +A + + MP E V W ++L IE AE+LF +
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIE----DAEELFEV--M 260
Query: 634 PISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW 674
P+ + + M + LG+ G+ R+ S++ R D SW
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND--ASW 299
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 218/672 (32%), Positives = 349/672 (51%), Gaps = 43/672 (6%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G L A +FDEMP R SWNTMISGY+ G+ ++A L + M RS ++ SFS
Sbjct: 47 KFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSR 106
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
+L A LG+QVH L++K G+E VGS+L+ +C + +A F+E+ + N
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPN 166
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
V W+ +++G+VQ + A L G M ++ V M
Sbjct: 167 SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT------------------------MD 202
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
P LD + C L K VH +K GL + +I A+ Y D ++
Sbjct: 203 AGTFAPLLTLLDDPM-FCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGY 344
DAKRV++ +GG L NS+I G E A +F ++ ET+ +Y ++
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 345 AMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSK--NGELDEAVKLFDKTKGERNSV 398
+ K L + K L ++ N +IS+Y + G +++A+ LF+ K ++ +
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS-KDLI 374
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
+WNS+++G+ G +A+K + +R + FS L R+C+ L + Q GQ +HA
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALA 434
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP-NVAAWTALINGYAYHGLGSES 517
+K+ F +N +V ++L+ YSKCG + A++ F I S + AW A+I GYA HGLG S
Sbjct: 435 TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 494
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ LF M Q V + TF AIL+ACSH GL+ +GLE+ + M+ Y++ P +EHY VD
Sbjct: 495 LDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVD 554
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG 637
LLGR+G + +A+E I MP+ D ++ L +IE+ + A L ++P
Sbjct: 555 LLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFT 614
Query: 638 FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVI 697
+V LS+MY+ L +W +K +++K ++ ++K PG SWIE+ N + F+ ED+++ I
Sbjct: 615 YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDI 674
Query: 698 YATVDHLTATIN 709
Y + LT +
Sbjct: 675 YMMIKDLTQEMQ 686
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 201/466 (43%), Gaps = 60/466 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH-RSCVKLNEISF 106
AK + +A F E+ SWN +I+G+ Q A L M ++ V ++ +F
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
+ +L+ L KQVH+ +LK G + + +A++ C + +A+ VF+ L
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 167 GNHVL-WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
++ W+ M++G+ + ++ +A +LF +
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQ------------------------------- 295
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHA--GKVVHGLCIKDGLDFDNSIGGALAEFYCD 283
M+R V + +T ++ C+ G H GK +HG+ IK GL+ S AL Y
Sbjct: 296 -MQRHWVETDIYTYTGLLSACS--GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Query: 284 --RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI 341
++DA ++ES+ + ++ NS+I G G E+A F LR S + +
Sbjct: 353 FPTGTMEDALSLFESLKSKDLIS-WNSIITGFAQKGLSEDAVKFFSYLR-----SSEIKV 406
Query: 342 KGYAMSSQIEKSKRL--------FEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLF 388
YA S+ + L +A K N ++++I +YSK G ++ A K F
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
+ + ++V WN+M+ GY +G +L L+ M +V TF+ + AC+
Sbjct: 467 QQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLI 526
Query: 449 QQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
Q+G +LL+ Q + A VD + G + A+ S+
Sbjct: 527 QEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Query: 42 ISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKL 101
IS+ + TG + +A +F+ + + + SWN++I+G++Q G ++A+ S++ S +K+
Sbjct: 347 ISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKV 406
Query: 102 NEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVF 161
++ +FSA+L SC+ +L LG+Q+H+L KSGF V S+L+ +C I A F
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 162 EELRDGNH-VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV 200
+++ + V W+ M+ GY Q + ++DLF +M ++V
Sbjct: 467 QQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 151/356 (42%), Gaps = 70/356 (19%)
Query: 41 NISIAHRAKTGELAEARHMFDEMP-LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV 99
N I+ A G +++A+ +FD + + + SWN+MI+G+S+ + A L M R V
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSAL--LYFCVRCCGIGEA 157
+ + +++ +LS+C+ GK +H +++K G E+ +AL +Y + +A
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
+FE L+ + + W+ +++G+ Q+ +
Sbjct: 362 LSLFESLKSKDLISWNSIITGFAQKGL--------------------------------S 389
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
E A+ F +R SE+ +++ ++R C+ L L G+ +H L K G + + +L
Sbjct: 390 EDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSL 449
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
Y I+ A++ ++ + + + +++
Sbjct: 450 IVMYSKCGIIESARKCFQQISS-------------------------------KHSTVAW 478
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFD 389
N MI GYA + S LF +M +N+ + +++ S G + E ++L +
Sbjct: 479 NAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 365/691 (52%), Gaps = 55/691 (7%)
Query: 34 HPHVISTNIS---------IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRY 84
H H++++N ++ K G L +AR +FD MP R + S+ ++I+GYSQ G+
Sbjct: 90 HDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQG 149
Query: 85 DEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSAL 144
EA+ L M + + ++ +F +++ +CA S + LGKQ+H+ ++K
Sbjct: 150 AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK------------- 196
Query: 145 LYFCVRCCGIGEAELVFEELRDGNHVL-WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAW 203
L +H++ + +++ YV+ + M +A +F +P++D+++W
Sbjct: 197 -------------------LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISW 237
Query: 204 TTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
+++I+G+++ E L + PNE+ ++ C+ L G +HGLCI
Sbjct: 238 SSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI 297
Query: 264 KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM--GGEACLNVANSLIGGLILMGRIEE 321
K L + G +L + Y ++ A+RV++ + A NV +I GL G +E
Sbjct: 298 KSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV---IIAGLANNGYADE 354
Query: 322 AELIFYGLRETN--PISYNL------MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMIS 373
A +F +R + P + +L K A+S ++ + + +LT N++++
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y+ +L LF+ + +SV+WN++++ + + Q E L+L+ M +
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T L R C + S + G +H + KT ++ L+D Y+KCG L A+R F S+
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
+ +V +W+ LI GYA G G E+++LF+ M G+ PN TFV +L+ACSH GL+ +GL
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWF 613
+++ +MQ + ++PT EH +CVVDLL R+GRL EAE FI++M +E D V+W LL+A
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 614 WKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
++ + ++AAE + +DP + V+L +M+A G W +R ++ +++K PG S
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Query: 674 WIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
WIE+ + IH+F ED H D IY + ++
Sbjct: 715 WIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/555 (21%), Positives = 233/555 (41%), Gaps = 47/555 (8%)
Query: 65 LRTVSSWNTMISGYSQWGRYDEALALASFMHR-SCVKLNEISFSAVLSSCARSGSLFLGK 123
++T N I+ + Y EAL F + S K+ ++ +++ +C+ S SL G+
Sbjct: 28 IKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGR 87
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
++H +L S + ++ + +L +C + +A VF+ + + N V ++ +++GY Q
Sbjct: 88 KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNG 147
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
A+ L+ KM D+V P++F +I
Sbjct: 148 QGAEAIRLYLKMLQEDLV--------------------------------PDQFAFGSII 175
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
+ CA + GK +H IK AL Y + + DA RV+ + + +
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 304 NVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL-- 356
+ + S+I G +G EA E++ +G+ N + +K + + + ++
Sbjct: 236 SWS-SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 357 --FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
+ N + ++ +Y++ G L+ A ++FD+ + ++ +WN +++G +NG
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYAD 353
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
EA+ ++ MR + L A T + QG +H+++ K F A++ V +L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 475 DFYSKCGHLADAQRSFTSIF-SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNA 533
Y+ C L F + + +W ++ H E + LF+ MLV P+
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 534 ATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFIN 593
T +L C L G ++ H + + P ++D+ + G L +A +
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD 532
Query: 594 QMPIEADGVIWGALL 608
M D V W L+
Sbjct: 533 SMD-NRDVVSWSTLI 546
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/649 (31%), Positives = 335/649 (51%), Gaps = 83/649 (12%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
++ + I+ ++ G++ EAR FD + + + SWN+++SGY G EA L
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQL------- 70
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
+E+S V+S L SG+ K + I EA
Sbjct: 71 ---FDEMSERNVVSWNG---------------LVSGYIKNRM--------------IVEA 98
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG- 216
VFE + + N V W+ M+ GY+Q M+G A LF +MP R+ V+WT + G +DG
Sbjct: 99 RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLI--DDGR 156
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
++A L+ M +V+ + ++ GLC + +D
Sbjct: 157 IDKARKLYDMMPVKDVVA-------------------STNMIGGLCREGRVD-------- 189
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS 336
+A+ +++ M E + ++I G R++ A +F + E +S
Sbjct: 190 ------------EARLIFDEM-RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS 236
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERN 396
+ M+ GY +S +IE ++ FE M K + + N MI + + GE+ +A ++FD + +R+
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME-DRD 295
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
+ TW M+ Y G EAL L+ M++ V S + + C +L S Q G+ +HA
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
HL + F +VYV + L+ Y KCG L A+ F S ++ W ++I+GYA HGLG E
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
++ +F M G +PN T +AIL+ACS+AG L +GLEIF SM+ + VTPT+EHY+C V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPIS 636
D+LGR+G++ +A E I M I+ D +WGALL A +++ E AA+KLF +P+
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAG 535
Query: 637 GFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFS 685
+V+LS++ A +WG +RK +++ + K PGCSWIE+ +HMF+
Sbjct: 536 TYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFT 584
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 190/445 (42%), Gaps = 81/445 (18%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
E +V+S N ++ K + EAR++F+ MP R V SW M+ GY Q G EA +L
Sbjct: 73 EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESL 132
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL-LKSGFEKFGLVGSALLYFCV 149
M NE+S++ + G + ++++ ++ +K ++G C
Sbjct: 133 FWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGG----LC- 183
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
R + EA L+F+E+R+ N V W+ M++GY Q + + A LF MP + V+WT+++ G
Sbjct: 184 REGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLG 243
Query: 210 Y---ARREDGCE------------------------------RALDL------------- 223
Y R ED E R DL
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 224 ---------------FRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
F M++ V P+ +L ++ +CA L +L G+ VH ++ D
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
D + L Y + AK V++ + + + NS+I G G EEA IF+
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII-MWNSIISGYASHGLGEEALKIFHE 422
Query: 329 LRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNG 379
+ + N ++ ++ + + ++E+ +FE M K + + + + + G
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMM 404
++D+A++L + + ++ W +++
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALL 507
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/679 (32%), Positives = 364/679 (53%), Gaps = 58/679 (8%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGY--SQWGRYDEALALASFMHRSCVKLNEIS 105
AK+G L+ AR +F++M R + N ++ G +WG +EA L M+ S + ++ S
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG--EEATKLFMDMN-SMIDVSPES 310
Query: 106 FSAVLSS-----CARSGSLFLGKQVHSLLLKSGFEKFGL-VGSALLYFCVRCCGIGEAEL 159
+ +LSS A L G++VH ++ +G F + +G+ L+ +C I +A
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC-E 218
VF + D +D V+W ++I+G ++GC
Sbjct: 371 VFYFMTD-------------------------------KDSVSWNSMITGL--DQNGCFI 397
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
A++ ++ MRR ++LP FTL + CA L G+ +HG +K G+D + S+ AL
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGR-IEEAELIFYGLRET----N 333
Y + +++ ++++ SM ++ NS+IG L R + EA + F + N
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGALARSERSLPEAVVCFLNAQRAGQKLN 516
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFD 389
I+++ ++ + S E K++ N+ T+ N +I+ Y K GE+D K+F
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
+ R++VTWNSM+SGYIHN ++AL L M + ++ + A S+ + +
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
+G +HA + +++V VG+ALVD YSKCG L A R F ++ N +W ++I+GYA
Sbjct: 637 RGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYA 696
Query: 510 YHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
HG G E++ LF +M + G P+ TFV +LSACSHAGLL +G + F SM Y + P
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA--SWFWKDIEVGERAAEK 626
IEH++C+ D+LGR+G L + E+FI +MP++ + +IW +L A + E+G++AAE
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Query: 627 LFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSV 686
LF L+P +V+L NMYA GRW RK+++ +++K+ G SW+ + + +HMF
Sbjct: 817 LFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVA 876
Query: 687 EDKTHAYSDVIYATVDHLT 705
DK+H +DVIY + L
Sbjct: 877 GDKSHPDADVIYKKLKELN 895
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 149/620 (24%), Positives = 275/620 (44%), Gaps = 55/620 (8%)
Query: 10 VRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS 69
V++C R F + L + + N+ A+ +TG+ AR +FDEMPLR
Sbjct: 10 VQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAY-LETGDSVSARKVFDEMPLRNCV 68
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS--LFLGKQVHS 127
SW ++SGYS+ G + EAL M + + N+ +F +VL +C GS + G+Q+H
Sbjct: 69 SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG 128
Query: 128 LLLKSGFEKFGLVGSALLYFCVRCCG-IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMG 186
L+ K + +V + L+ +C G +G A F ++ N V W+ ++S Y Q
Sbjct: 129 LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR 188
Query: 187 NAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRIC 246
+A +F M + DG P E+T ++
Sbjct: 189 SAFRIFSSM-----------------QYDGSR---------------PTEYTFGSLVTTA 216
Query: 247 ARLGALHAGKVVHGLCI--KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
L + +C K GL D +G L + ++ A++V+ M +
Sbjct: 217 CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 305 VANSLIGGLILMGRIEEAELIFYGLR---ETNPISYNLMIKG---YAMSSQI--EKSKRL 356
+ N L+ GL+ EEA +F + + +P SY +++ Y+++ ++ +K + +
Sbjct: 277 L-NGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 357 FEKMAPKNLTSL-----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNG 411
+ L N ++++Y+K G + +A ++F +++SV+WNSM++G NG
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-YFMTDKDSVSWNSMITGLDQNG 394
Query: 412 QHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGT 471
EA++ Y +MRR + T +C SL + GQ +H K NV V
Sbjct: 395 CFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 472 ALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG-SESILLFRSMLVQGVL 530
AL+ Y++ G+L + ++ F+S+ + +W ++I A E+++ F + G
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEE 590
N TF ++LSA S G +I H + + + ++ G+ G + E+
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEK 573
Query: 591 FINQMPIEADGVIWGALLNA 610
++M D V W ++++
Sbjct: 574 IFSRMAERRDNVTWNSMISG 593
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 180/405 (44%), Gaps = 53/405 (13%)
Query: 38 ISTNISIAHR-----AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGR-YDEALALA 91
I N+S+++ A+TG L E R +F MP SWN++I ++ R EA+
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
R+ KLN I+FS+VLS+ + LGKQ+H L LK+ +AL+ +C
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565
Query: 152 CGIGEAELVFEELRD-GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY 210
+ E +F + + ++V W+ M+SGY+ +++ A+DL W L +G
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL----------VWFMLQTG- 614
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
+R D F V+ A + L G VH ++ L+ D
Sbjct: 615 -QRLD--------------------SFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
+G AL + Y +D A R + +M + NS+I G G+ EEA +F ++
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETMK 712
Query: 331 ---ETNP--ISYNLMIKGYAMSSQIEKSKRLFEKM------APKNLTSLNTMISVYSKNG 379
+T P +++ ++ + + +E+ + FE M AP+ + + M V + G
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR-IEHFSCMADVLGRAG 771
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSGYIH-NGQHSEALKLYVTM 423
ELD+ +K + N + W +++ NG+ +E K M
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 41/311 (13%)
Query: 355 RLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
RL++ K++ N +I+ Y + G+ A K+FD+ RN V+W ++SGY NG+H
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP-LRNCVSWACIVSGYSRNGEHK 84
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ--GQLLHAHLSKTPFQANVYVGTA 472
EAL M + + ++ F + RAC + S G+ +H + K + + V
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 473 LVDFYSKC-GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLP 531
L+ Y KC G + A +F I N +W ++I+ Y+ G + +F SM G P
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 532 NAATFVAIL-SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL---------LGR 581
TF +++ +ACS L + +++ ++ TI+ + DL +
Sbjct: 205 TEYTFGSLVTTACS----LTE-----PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 582 SGRLKEAEEFINQM----PIEADGVIWGALLNASWFWKDIEVGERAAEKLF-----SLDP 632
SG L A + NQM + +G++ G L+ W GE A KLF +D
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVG-LVRQKW-------GEEAT-KLFMDMNSMIDV 306
Query: 633 NPISGFVILSN 643
+P S ++LS+
Sbjct: 307 SPESYVILLSS 317
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 213/674 (31%), Positives = 351/674 (52%), Gaps = 46/674 (6%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G + AR +FD +P ++ +W TMISG + GR +L L + V + S
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
VLS+C+ L GKQ+H+ +L+ G E +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEM-------------------------------D 283
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
L ++++ YV+ + A LF MP +++++WTTL+SGY + E A++LF M
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE-AMELFTSMS 342
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
+ + P+ + ++ CA L AL G VH IK L D+ + +L + Y D +
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMG---RIEEAELIFYGLR----ETNPISYNLMI 341
DA++V++ A + + N++I G +G + EA IF +R + +++ ++
Sbjct: 403 DARKVFDIFAA-ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 342 KGYAMSSQIEKSKRLFEKMAPKNLT----SLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
+ A + + SK++ M L + + +I VYS L ++ +FD+ K ++
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK-VKDL 520
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
V WNSM +GY+ ++ EAL L++ ++ TF+ + A +L S Q GQ H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQ 580
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
L K + N Y+ AL+D Y+KCG DA ++F S S +V W ++I+ YA HG G ++
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ + M+ +G+ PN TFV +LSACSHAGL+ DGL+ F M + + + P EHY C+V
Sbjct: 641 LQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVS 699
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG 637
LLGR+GRL +A E I +MP + ++W +LL+ ++E+ E AAE DP
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGS 759
Query: 638 FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVI 697
F +LSN+YA G W + +R+R++ + K+PG SWI +N +H+F +DK+H ++ I
Sbjct: 760 FTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQI 819
Query: 698 YATVDHLTATINSI 711
Y +D L I +
Sbjct: 820 YEVLDDLLVQIRGV 833
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 231/476 (48%), Gaps = 34/476 (7%)
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDM---------MGNAMDLFGKMPVRDVVAWTTLISG 209
L ++ + G ++W L L Y+ + M A +F KMP R++V+W+T++S
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 210 ---YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV--VHGLCIK 264
+ E+ L+ +R + S PNE+ L I+ C+ L V + +K
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDS---PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVK 176
Query: 265 DGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAEL 324
G D D +G L +FY ID A+ V++++ ++ + ++I G + MGR +
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT-WTTMISGCVKMGRSYVSLQ 235
Query: 325 IFYGLRETN--PISYNL--MIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYS 376
+FY L E N P Y L ++ ++ +E K++ + L + +N +I Y
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
K G + A KLF+ +N ++W +++SGY N H EA++L+ +M + + S
Sbjct: 296 KCGRVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+ +C SL + G +HA+ K + YV +L+D Y+KC L DA++ F +
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 497 NVAAWTALINGYAYHGLG---SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
+V + A+I GY+ G E++ +FR M + + P+ TFV++L A A L + GL
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGL 472
Query: 554 -EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ H + Y + I + ++D+ LK++ ++M ++ D VIW ++
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMF 527
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 161/655 (24%), Positives = 279/655 (42%), Gaps = 124/655 (18%)
Query: 40 TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFMHRSC 98
+NI I ++ G + AR +F++MP R + SW+TM+S + G Y+E+L + F
Sbjct: 82 SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK 141
Query: 99 VKLNEISFSAVLSSCARSGSLFLGK----QVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
NE S+ + +C SG G+ Q+ S L+KSGF++ VG+ L+ F ++ I
Sbjct: 142 DSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNI 199
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
A LVF+ L + + V W+ M+SG V+ MG R V
Sbjct: 200 DYARLVFDALPEKSTVTWTTMISGCVK---MG-----------RSYV------------- 232
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
+L LF + V+P+ + L V+ C+ L L GK +H ++ GL+ D S+
Sbjct: 233 -----SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL- 286
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
N LI + GR+ A +F G+ N
Sbjct: 287 -------------------------------MNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 335 ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS--------------------------- 367
IS+ ++ GY ++ +++ LF M+ L
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 368 ------------LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH-- 413
N++I +Y+K L +A K+FD + V +N+M+ GY G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-IFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 414 -SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTA 472
EAL ++ MR + S TF L RA SL S + +H + K +++ G+A
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 473 LVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPN 532
L+D YS C L D++ F + ++ W ++ GY E++ LF + + P+
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 533 AATFVAILSACSHAGLLNDGLEIFHSMQICYR---VTPTIEHYTCVVDLLGRSGRLKEAE 589
TF +++A + + G E FH Q+ R P I + ++D+ + G ++A
Sbjct: 555 EFTFANMVTAAGNLASVQLGQE-FHC-QLLKRGLECNPYITN--ALLDMYAKCGSPEDAH 610
Query: 590 EFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS--LDPNPISGFVILS 642
+ + D V W +++++ + + + EK+ S ++PN I+ +LS
Sbjct: 611 KAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 26 LLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYD 85
LL+ +P++ TN + AK G +A FD R V WN++IS Y+ G
Sbjct: 581 LLKRGLECNPYI--TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 86 EALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALL 145
+AL + M ++ N I+F VLS+C+ +G + G + L+L+ G E
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP--------- 689
Query: 146 YFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRD-VVAWT 204
+ H + + L G R + A +L KMP + + W
Sbjct: 690 --------------------ETEHYVCMVSLLGRAGR--LNKARELIEKMPTKPAAIVWR 727
Query: 205 TLISGYAR 212
+L+SG A+
Sbjct: 728 SLLSGCAK 735
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 211/706 (29%), Positives = 357/706 (50%), Gaps = 63/706 (8%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V++ + + AK E+ +F +P + SW+ +I+G Q AL M +
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK 274
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
+++ +++VL SCA L LG Q+H+ LKS F G+V +A L +C + +
Sbjct: 275 VNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD 334
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A+++F+ + N ++ +I+GY++ E G
Sbjct: 335 AQILFDNSENLNRQ-------------------------------SYNAMITGYSQEEHG 363
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+AL LF + S + +E +L V R CA + L G ++GL IK L D + A
Sbjct: 364 F-KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ET 332
+ Y A+ +A RV++ M ++ N++I G+ E +F + E
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 333 NPISYNLMIK---GYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL-- 387
+ ++ ++K G ++ +E + + N + ++I +YSK G ++EA K+
Sbjct: 482 DEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 388 --------------FDKTKGERNS---VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
+K +R V+WNS++SGY+ Q +A L+ M + +
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
+ T++ + C +L S G+ +HA + K Q++VY+ + LVD YSKCG L D++ F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 491 TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
+ W A+I GYA+HG G E+I LF M+++ + PN TF++IL AC+H GL++
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 551 DGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
GLE F+ M+ Y + P + HY+ +VD+LG+SG++K A E I +MP EAD VIW LL
Sbjct: 722 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 781
Query: 611 SWFWK-DIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKD 669
+ ++EV E A L LDP S + +LSN+YA G W + + +R+ ++ +L+K+
Sbjct: 782 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 841
Query: 670 PGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSIIPFN 715
PGCSW+EL + +H+F V DK H + IY + L + + PF+
Sbjct: 842 PGCSWVELKDELHVFLVGDKAHPRWEEIY---EELGLIYSEMKPFD 884
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 260/536 (48%), Gaps = 20/536 (3%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEIS---FSAVLSSCARSGSLFLG 122
R+V S+N ++ + R F++ ++N +S FS V CA+ G+L LG
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLN----QVNSVSTTNFSFVFKECAKQGALELG 67
Query: 123 KQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQR 182
KQ H+ ++ SGF V + LL A +VF+++ + V W+ M++GY +
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 183 DMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCV 242
+ M A F MPVRDVV+W +++SGY + + +++++F M R + + T +
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL-KSIEVFVDMGREGIEFDGRTFAII 186
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC 302
+++C+ L G +HG+ ++ G D D AL + Y ++ RV++ + +
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLRETNP-IS---YNLMIKGYAMSSQIEKSKRLFE 358
++ + ++I G + + A F +++ N +S Y +++ A S++ +L
Sbjct: 247 VSWS-AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 359 KMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
+ + + +Y+K + +A LFD ++ N ++N+M++GY
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN-LNRQSYNAMITGYSQEEHGF 364
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
+AL L+ + + + S +FRAC + +G ++ K+ +V V A +
Sbjct: 365 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI 424
Query: 475 DFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAA 534
D Y KC LA+A R F + + +W A+I + +G G E++ LF SML + P+
Sbjct: 425 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484
Query: 535 TFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEE 590
TF +IL AC+ G L G+EI HS + + ++D+ + G ++EAE+
Sbjct: 485 TFGSILKACT-GGSLGYGMEI-HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 284/609 (46%), Gaps = 48/609 (7%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P N + + + A +FD+MPLR V SWN MI+GYS + ++ SF
Sbjct: 81 PTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS---KSNDMFKANSFF 137
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV----R 150
+ V+ + +S++++LS ++G +V + + G E G + +L C
Sbjct: 138 NMMPVR-DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT 196
Query: 151 CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY 210
G+ +V D + V S +L Y + ++ +F +P ++ V+W+ +I+G
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 256
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
+ + AL F+ M++ ++ V+R CA L L G +H +K D
Sbjct: 257 VQN-NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD 315
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAELIFYG 328
+ A + Y D + DA+ ++++ LN N++I G +A L+F+
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDN---SENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 329 LRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL-----NTMISVYSKNG 379
L + + IS + + + A+ + + +++ +A K+ SL N I +Y K
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-GLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
L EA ++FD+ + R++V+WN++++ + NG+ E L L+V+M R ++ TF +
Sbjct: 432 ALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 440 RACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS-PNV 498
+ACT S G +H+ + K+ +N VG +L+D YSKCG + +A++ + F NV
Sbjct: 491 KACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 499 A-------------------AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
+ +W ++I+GY ++ +LF M+ G+ P+ T+ +
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 540 LSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEA 599
L C++ G +I H+ I + + + +VD+ + G L ++ + + +
Sbjct: 610 LDTCANLASAGLGKQI-HAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRR 667
Query: 600 DGVIWGALL 608
D V W A++
Sbjct: 668 DFVTWNAMI 676
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 377/736 (51%), Gaps = 78/736 (10%)
Query: 14 CKRVEKFRLF-TTLLRDSEPHHPHVISTNISIAHRAKTGE-LAEARHMFDEM-PLRTVSS 70
CK +++ ++F +L + + I+ ++ + T E L+ A+ +F+ T
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
+N++I GY+ G +EA+ L M S + ++ +F LS+CA+S + G Q+H L++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
K G+ K V ++L++F C + A VF+E+ +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE------------------------ 197
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLF-RCMRRSEVLPNEFTLDCVIRICARL 249
R+VV+WT++I GYARR D + A+DLF R +R EV PN T+ CVI CA+L
Sbjct: 198 -------RNVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 250 GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
L G+ V+ G++ ++ + AL + Y +AID AKR+++ G + L++ N++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAM 308
Query: 310 IGGLILMGRIEEAELIF------------------------------------YGLR--- 330
+ G EA +F Y LR
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 331 ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDK 390
E+ N +I Y + + + R+F++M+ K + + N++++ Y +NGE+D A + F+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE- 427
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR-RLSVDHSRSTFSVLFRACTSLCSFQ 449
T E+N V+WN+++SG + EA++++ +M+ + V+ T + AC L +
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALD 487
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
+ ++ ++ K Q +V +GT LVD +S+CG A F S+ + +V+AWTA I A
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
G +I LF M+ QG+ P+ FV L+ACSH GL+ G EIF+SM + V+P
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
HY C+VDLLGR+G L+EA + I MP+E + VIW +LL A ++E+ AAEK+
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV 667
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK 689
L P +V+LSN+YA GRW +R ++ LRK PG S I++ H F+ D+
Sbjct: 668 LAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDE 727
Query: 690 THAYSDVIYATVDHLT 705
+H I A +D ++
Sbjct: 728 SHPEMPNIEAMLDEVS 743
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 376/736 (51%), Gaps = 78/736 (10%)
Query: 14 CKRVEKFRLF-TTLLRDSEPHHPHVISTNISIAHRAKTGE-LAEARHMFDEM-PLRTVSS 70
CK +++ ++F +L + + I+ ++ + T E L+ A+ +F+ T
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
+N++I GY+ G +EA+ L M S + ++ +F LS+CA+S + G Q+H L++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
K G+ K V ++L++F C + A VF+E+ +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE------------------------ 197
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLF-RCMRRSEVLPNEFTLDCVIRICARL 249
R+VV+WT++I GYARR D + A+DLF R +R EV PN T+ CVI CA+L
Sbjct: 198 -------RNVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 250 GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
L G+ V+ G++ ++ + AL + Y +AID AKR+++ G L++ N++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN-LDLCNAM 308
Query: 310 IGGLILMGRIEEAELIF------------------------------------YGLR--- 330
+ G EA +F Y LR
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 331 ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDK 390
E+ N +I Y + + + R+F++M+ K + + N++++ Y +NGE+D A + F+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE- 427
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR-RLSVDHSRSTFSVLFRACTSLCSFQ 449
T E+N V+WN+++SG + EA++++ +M+ + V+ T + AC L +
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALD 487
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
+ ++ ++ K Q +V +GT LVD +S+CG A F S+ + +V+AWTA I A
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
G +I LF M+ QG+ P+ FV L+ACSH GL+ G EIF+SM + V+P
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
HY C+VDLLGR+G L+EA + I MP+E + VIW +LL A ++E+ AAEK+
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQV 667
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK 689
L P +V+LSN+YA GRW +R ++ LRK PG S I++ H F+ D+
Sbjct: 668 LAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDE 727
Query: 690 THAYSDVIYATVDHLT 705
+H I A +D ++
Sbjct: 728 SHPEMPNIEAMLDEVS 743
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 205/665 (30%), Positives = 355/665 (53%), Gaps = 43/665 (6%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
++ G L AR +FDEMP+R + SWN++ISGYS G Y+EAL + + S + + + S
Sbjct: 152 SRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVS 211
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+VL + G+L + KQ GL G AL + +
Sbjct: 212 SVLPAF---GNLLVVKQGQ-----------GLHGFAL-----------------KSGVNS 240
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
V+ + +++ Y++ +A +F +M VRD V++ T+I GY + E E ++ +F
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE-MVEESVRMF-LE 298
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ P+ T+ V+R C L L K ++ +K G ++++ L + Y +
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKG 343
A+ V+ SM + ++ NS+I G I G + EA +F + + + I+Y ++I
Sbjct: 359 ITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 344 YAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
+ ++ K L +L+ N +I +Y+K GE+ +++K+F + G ++VT
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF-SSMGTGDTVT 476
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
WN+++S + G + L++ MR+ V +TF V C SL + + G+ +H L
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
+ +++ + +G AL++ YSKCG L ++ R F + +V WT +I Y +G G +++
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
F M G++P++ F+AI+ ACSH+GL+++GL F M+ Y++ P IEHY CVVDLL
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Query: 580 GRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFV 639
RS ++ +AEEFI MPI+ D IW ++L A D+E ER + ++ L+P+ +
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 640 ILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYA 699
+ SN YA L +W + + IRK L+ + K+PG SWIE+ N+H+FS D + S+ IY
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 700 TVDHL 704
+++ L
Sbjct: 777 SLEIL 781
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 278/592 (46%), Gaps = 48/592 (8%)
Query: 64 PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
P + V WN++I +S+ G + EAL + S V ++ +F +V+ +CA +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
V+ +L GFE VG+AL+ Y +
Sbjct: 127 LVYEQILDMGFESDLFVGNALV-------------------------------DMYSRMG 155
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
++ A +F +MPVRD+V+W +LISGY+ E AL+++ ++ S ++P+ FT+ V+
Sbjct: 156 LLTRARQVFDEMPVRDLVSWNSLISGYS-SHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
L + G+ +HG +K G++ + L Y DA+RV++ M +
Sbjct: 215 PAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV 274
Query: 304 NVANSLIGGLILMGRIEEAELIFY-GLRETNP--ISYNLMIKGYAMSSQIEKSKRLFEKM 360
+ N++I G + + +EE+ +F L + P ++ + +++ + +K ++ M
Sbjct: 275 SY-NTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 361 APKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEA 416
T N +I VY+K G++ A +F+ + +++V+WNS++SGYI +G EA
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC-KDTVSWNSIISGYIQSGDLMEA 392
Query: 417 LKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
+KL+ M + T+ +L T L + G+ LH++ K+ ++ V AL+D
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 477 YSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
Y+KCG + D+ + F+S+ + + W +I+ G + + + M V+P+ ATF
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 537 VAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
+ L C+ G EI H + + ++ ++++ + G L+ + +M
Sbjct: 513 LVTLPMCASLAAKRLGKEI-HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 597 IEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI--SGFVILSNMYA 646
D V W ++ A + + GE+A E ++ + I V ++ +YA
Sbjct: 572 -RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 192/447 (42%), Gaps = 54/447 (12%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
NI I AK G++ AR +F+ M + SWN++ISGY Q G EA+ L M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
+ I++ ++S R L GK +HS +KSG V +AL+ +C +G++ +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F + G D V W T+IS R D
Sbjct: 466 FSSMGTG-------------------------------DTVTWNTVISACVRFGDFAT-G 493
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
L + MR+SEV+P+ T + +CA L A GK +H ++ G + + IG AL E
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPIS 336
Y ++++ RV+E M + +I + G E+A F + ++ + +
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVT-WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVY-------SKNGELDEAVKLFD 389
+ +I + S +++ FEKM K ++ MI Y S++ ++ +A +
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKM--KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF-RACTSL--- 445
+ ++ W S++ +G A + V+ R + ++ +S+L A +L
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAER--VSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 446 --CSFQQGQLLHAHLSKTPFQANVYVG 470
S + L H++K P + + VG
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVG 755
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 97/182 (53%)
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
+I YS E ++ +F + +N WNS++ + NG EAL+ Y +R V
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
+ TF + +AC L + G L++ + F+++++VG ALVD YS+ G L A++ F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 491 TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
+ ++ +W +LI+GY+ HG E++ ++ + ++P++ T ++L A + ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 551 DG 552
G
Sbjct: 225 QG 226
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 16/363 (4%)
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
+H L I GLD + G L + Y + V+ + + + NS+I G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 318 RIEEAELIFYG-LRET--NPISYNL--MIKGYAMSSQIEKSKRLFEKMAPKNLTSL---- 368
EA L FYG LRE+ +P Y +IK A E ++E++ S
Sbjct: 86 LFPEA-LEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
N ++ +YS+ G L A ++FD+ R+ V+WNS++SGY +G + EAL++Y ++ +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
T S + A +L +QGQ LH K+ + V V LV Y K DA+R
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + + ++ +I GY + ES+ +F L Q P+ T ++L AC H
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRD 322
Query: 549 LNDGLEIFHSM-QICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
L+ I++ M + + + T+ + ++D+ + G + A + N M + D V W ++
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSI 379
Query: 608 LNA 610
++
Sbjct: 380 ISG 382
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 43/301 (14%)
Query: 40 TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV 99
+N I AK GE+ ++ +F M +WNT+IS ++G + L + + M +S V
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+ +F L CA + LGK++H LL+ G+E +G+AL+ +C + +
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
VFE +M RDVV WT +I Y +G E+
Sbjct: 566 VFE-------------------------------RMSRRDVVTWTGMIYAYGMYGEG-EK 593
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
AL+ F M +S ++P+ +I C+ H+G V GL + + I +
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACS-----HSGLVDEGLACFEKMKTHYKIDPMIEH 648
Query: 280 FYCDRD------AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN 333
+ C D I A+ ++M + ++ S++ G +E AE + + E N
Sbjct: 649 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Query: 334 P 334
P
Sbjct: 709 P 709
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 339/659 (51%), Gaps = 44/659 (6%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
++ +K ++ A +F+ + + WN MI GY+ G + + L M S +++
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEE 163
+F+++LS+CA S L +G Q HS+++K K VG+AL+ +C + +A +FE
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 164 LRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDL 223
+ D RD V W T+I Y + E+ E A DL
Sbjct: 489 MCD-------------------------------RDNVTWNTIIGSYVQDENESE-AFDL 516
Query: 224 FRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCD 283
F+ M ++ + L ++ C + L+ GK VH L +K GLD D G +L + Y
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSK 576
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNL 339
I DA++V+ S+ + +++ N+LI G +EEA ++F + R NP I++
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSM-NALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLTSLN-----TMISVYSKNGELDEAVKLFDKTKGE 394
+++ + + ++ + +S +++ +Y + + EA LF +
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP 694
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
++ V W MMSG+ NG + EALK Y MR V ++TF + R C+ L S ++G+ +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS-PNVAAWTALINGYAYHGL 513
H+ + + L+D Y+KCG + + + F + NV +W +LINGYA +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 514 GSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYT 573
+++ +F SM ++P+ TF+ +L+ACSHAG ++DG +IF M Y + ++H
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 574 CVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPN 633
C+VDLLGR G L+EA++FI ++ D +W +LL A D GE +AEKL L+P
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 634 PISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHA 692
S +V+LSN+YA G W + +RK ++ ++K PG SWI++ H+F+ DK+H+
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 302/610 (49%), Gaps = 56/610 (9%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK +++ A FD + + V++WN+M+S YS G+ + L + + + N+ +FS
Sbjct: 106 AKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
VLS+CAR ++ G+Q+H ++K G E+ G AL+ +C I +A VFE + D
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 168 NHVLWSLMLSGYVQ--------------RD---------------------MMGNAMDLF 192
N V W+ + SGYV+ RD + +A LF
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 193 GKMPVRDVVAWTTLISGYARREDGCER-ALDLFRCMRRSEVLPNEFTLDCVIRICARLGA 251
G+M DVVAW +ISG+ +R GCE A++ F MR+S V TL V+ +
Sbjct: 285 GEMSSPDVVAWNVMISGHGKR--GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 252 LHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG 311
L G VVH IK GL + +G +L Y + ++ A +V+E++ E N++I
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL-EEKNDVFWNAMIR 401
Query: 312 GLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKR----LFEKMAPK 363
G G + +F ++ + + ++ ++ A S +E + + +K K
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 364 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
NL N ++ +Y+K G L++A ++F++ +R++VTWN+++ Y+ + SEA L+ M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHL 483
+ + + +ACT + QG+ +H K +++ G++L+D YSKCG +
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
DA++ F+S+ +V + ALI GY+ + L E+++LF+ ML +GV P+ TF I+ AC
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG---RSGRLKEAEEFINQMPIEAD 600
L G + FH QI R + Y + LLG S + EA +++
Sbjct: 640 HKPESLTLGTQ-FHG-QITKRGFSSEGEYLG-ISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 601 GVIWGALLNA 610
V+W +++
Sbjct: 697 IVLWTGMMSG 706
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 244/515 (47%), Gaps = 65/515 (12%)
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEE--------LRDGNHVLW 172
LG++++ +L S + + LL C+ C + ++ VF+E LR G V
Sbjct: 29 LGRRIYGHVLPSHDQ----IHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHS 84
Query: 173 SLMLSGYVQRDMMGNAM-DLFGKMPV------------RDVVAWTTLISGYAR-REDGCE 218
++ G +GNA+ DL+ K +DV AW +++S Y+ + G
Sbjct: 85 KSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMYSSIGKPG-- 142
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
+ L F + +++ PN+FT V+ CAR + G+ +H IK GL+ ++ GGAL
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN 338
+ Y D I DA+RV+E + + L G + G EEA L+F +R+
Sbjct: 203 DMYAKCDRISDARRVFEWIVDPNTV-CWTCLFSGYVKAGLPEEAVLVFERMRD------- 254
Query: 339 LMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS- 397
E P +L + T+I+ Y + G+L +A LF GE +S
Sbjct: 255 -------------------EGHRPDHL-AFVTVINTYIRLGKLKDARLLF----GEMSSP 290
Query: 398 --VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
V WN M+SG+ G + A++ + MR+ SV +RST + A + + G ++H
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
A K +N+YVG++LV YSKC + A + F ++ N W A+I GYA++G
Sbjct: 351 AEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
+ + LF M G + TF ++LS C+ + L G + FHS+ I ++ + +
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNAL 469
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
VD+ + G L++A + +M + D V W ++ +
Sbjct: 470 VDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 10/255 (3%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
N ++ +Y+K ++ A K FD E++ WNSM+S Y G+ + L+ +V++ +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 156
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
++ TFS++ C + + G+ +H + K + N Y G ALVD Y+KC ++DA+R
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F I PN WT L +GY GL E++L+F M +G P+ FV +++ G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWG 605
L D +F M +P + + ++ G+ G A E+ M +++ G
Sbjct: 277 LKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 606 ALLNASWFWKDIEVG 620
++L+A ++++G
Sbjct: 332 SVLSAIGIVANLDLG 346
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 207/707 (29%), Positives = 363/707 (51%), Gaps = 51/707 (7%)
Query: 14 CKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNT 73
C +++ R L+ + + H T + ++ + G + EA +F+ + + ++T
Sbjct: 47 CSSLKELRQILPLVFKNGLYQEHFFQTKL-VSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
M+ G+++ D+AL M V+ +F+ +L C L +GK++H LL+KSG
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 134 F--EKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
F + F + G +Y +C + EA VF+
Sbjct: 166 FSLDLFAMTGLENMY--AKCRQVNEARKVFD----------------------------- 194
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCER-ALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+MP RD+V+W T+++GY+ ++G R AL++ + M + P+ T+ V+ + L
Sbjct: 195 --RMPERDLVSWNTIVAGYS--QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
+ GK +HG ++ G D +I AL + Y +++ A+++++ M ++ NS+I
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS-WNSMI 309
Query: 311 GGLILMGRIEEAELIFYGLRE--TNPISYNLMIKGYAMSS--QIEKSKRLFEKMA----- 361
+ +EA LIF + + P ++M +A + +E+ R K++
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGL 368
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
+N++ +N++IS+Y K E+D A +F K + R V+WN+M+ G+ NG+ +AL +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-RTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 422 TMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
MR +V T+ + A L + +H + ++ NV+V TALVD Y+KCG
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
+ A+ F + +V W A+I+GY HG G ++ LF M + PN TF++++S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
ACSH+GL+ GL+ F+ M+ Y + +++HY +VDLLGR+GRL EA +FI QMP++
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRL 661
++GA+L A K++ E+AAE+LF L+P+ V+L+N+Y W + +R +
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 662 QSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATI 708
LRK PGCS +E+ N +H F H S IYA ++ L I
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHI 714
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 213/485 (43%), Gaps = 41/485 (8%)
Query: 150 RCCGIGEAE----LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTT 205
RC + E LVF+ H + ++S + + + A +F + + V + T
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 206 LISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD 265
++ G+A+ D ++AL F MR +V P + ++++C L GK +HGL +K
Sbjct: 106 MLKGFAKVSD-LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 266 GLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELI 325
G D L Y +++A++V++ M E L N+++ G G A +
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRM-PERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 326 FYGLRETN--P-----------------ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT 366
+ E N P IS I GYAM S + +L
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD------------SLV 271
Query: 367 SLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRR 425
+++T ++ +Y+K G L+ A +LFD ERN V+WNSM+ Y+ N EA+ ++ M
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGML-ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
V + + AC L ++G+ +H + NV V +L+ Y KC +
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 486 AQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
A F + S + +W A+I G+A +G +++ F M + V P+ T+V++++A +
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 546 AGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWG 605
+ + I H + + + + T +VD+ + G + A + M E W
Sbjct: 451 LSITHHAKWI-HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWN 508
Query: 606 ALLNA 610
A+++
Sbjct: 509 AMIDG 513
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 201/670 (30%), Positives = 351/670 (52%), Gaps = 49/670 (7%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G+L EA +FDE+ + WN +++ ++ G + ++ L M S V+++ +FS V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
S + S+ G+Q+H +LKSGF + VG++L+ F
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF----------------------- 239
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERALDLFRCMRR 229
Y++ + +A +F +M RDV++W ++I+GY +G E+ L +F M
Sbjct: 240 --------YLKNQRVDSARKVFDEMTERDVISWNSIINGYV--SNGLAEKGLSVFVQMLV 289
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
S + + T+ V CA + G+ VH + +K ++ L + Y +D
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET--NPISYNL--MIKGYA 345
AK V+ M + ++ S+I G G EA +F + E +P Y + ++ A
Sbjct: 350 AKAVFREMSDRSVVSYT-SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 346 MSSQIEKSKRLFEKMAPKNLT----SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
+++ KR+ E + +L N ++ +Y+K G + EA +F + + ++ ++WN
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR-VKDIISWN 467
Query: 402 SMMSGYIHNGQHSEALKLY---VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
+++ GY N +EAL L+ + +R S D T + + AC SL +F +G+ +H ++
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDER--TVACVLPACASLSAFDKGREIHGYI 525
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
+ + ++ +V +LVD Y+KCG L A F I S ++ +WT +I GY HG G E+I
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
LF M G+ + +FV++L ACSH+GL+++G F+ M+ ++ PT+EHY C+VD+
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGF 638
L R+G L +A FI MPI D IWGALL D+++ E+ AEK+F L+P +
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 705
Query: 639 VILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
V+++N+YA +W Q +RKR+ LRK+PGCSWIE+ +++F D ++ ++ I
Sbjct: 706 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIE 765
Query: 699 ATVDHLTATI 708
A + + A +
Sbjct: 766 AFLRKVRARM 775
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 231/503 (45%), Gaps = 53/503 (10%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK----LNEISFSAVLSSCARSGSLFL 121
R+V+ NT + + + G + A+ L CV ++ + +VL CA S SL
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLL------CVSGKWDIDPRTLCSVLQLCADSKSLKD 112
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
GK+V + + +GF +GS L C + EA VF+E++ + W++++
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM----- 167
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
+ + + D G ++ LF+ M S V + +T C
Sbjct: 168 -NELAKSGDFSG--------------------------SIGLFKKMMSSGVEMDSYTFSC 200
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
V + + L ++H G+ +HG +K G NS+G +L FY +D A++V++ M
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLRETN-PISYNLMIKGYA--MSSQIEKSKRLFE 358
++ NS+I G + G E+ +F + + I ++ +A S++ R
Sbjct: 261 VIS-WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 359 KMAPKNLTS-----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH 413
+ K S NT++ +YSK G+LD A +F + +R+ V++ SM++GY G
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF-REMSDRSVVSYTSMIAGYAREGLA 378
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
EA+KL+ M + T + + C +G+ +H + + +++V AL
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 474 VDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL-PN 532
+D Y+KCG + +A+ F+ + ++ +W +I GY+ + +E++ LF +L + P+
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 533 AATFVAILSACSHAGLLNDGLEI 555
T +L AC+ + G EI
Sbjct: 499 ERTVACVLPACASLSAFDKGREI 521
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 218/482 (45%), Gaps = 45/482 (9%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N +A K + AR +FDEM R V SWN++I+GY G ++ L++ M S ++
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
++ + +V + CA S + LG+ VHS+ +K+ F + + LL +C + A+ V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F E+ D + V ++ M++GY + + G A+ LF +M E+G
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME-----------------EEG---- 392
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
+ P+ +T+ V+ CAR L GK VH ++ L FD + AL +
Sbjct: 393 -----------ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN-- 338
Y ++ +A+ V+ M + ++ N++IGG EA +F L E S +
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 339 ---LMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKT 391
++ A S +K + + + S N+++ +Y+K G L A LFD
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
++ V+W M++GY +G EA+ L+ MR+ ++ +F L AC+ +G
Sbjct: 561 -ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 452 -QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYA 509
+ + + + V +VD ++ G L A R ++ P+ W AL+ G
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 510 YH 511
H
Sbjct: 680 IH 681
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 4/220 (1%)
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
T +R+ N+ + + +G A+KL + +D R+ SVL + C S +
Sbjct: 55 TTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDID-PRTLCSVL-QLCADSKSLKD 112
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
G+ + + F + +G+ L Y+ CG L +A R F + W L+N A
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
G S SI LF+ M+ GV ++ TF + + S ++ G E H +
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG-EQLHGFILKSGFGERNS 231
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+V ++ R+ A + ++M E D + W +++N
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIING 270
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/677 (30%), Positives = 350/677 (51%), Gaps = 67/677 (9%)
Query: 56 ARHMFDEMPLRT-VSSWNTMISGYSQWGRYDEAL-ALASFMHRSCVKLNEISFSAVLSSC 113
ARH+F+ +R+ V WN+++SGYS+ + + L ++ S + +F V+ +
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 114 ARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWS 173
G FLG+ +H+L++KSG Y C + V+ S
Sbjct: 118 GALGREFLGRMIHTLVVKSG------------YVC-------------------DVVVAS 146
Query: 174 LMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVL 233
++ Y + ++ N++ +F +MP RDV +W T+IS + + + E+AL+LF M S
Sbjct: 147 SLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA-EKALELFGRMESSGFE 205
Query: 234 PNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRV 293
PN +L I C+RL L GK +H C+K G + D + AL + Y D ++ A+ V
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 294 YESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPI----------SYN 338
++ M ++ L NS+I G + G + +I G R + S N
Sbjct: 266 FQKMPRKS-LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 339 LM----IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
L+ I GY + S + ++ ++I +Y K GE + A +F KT+ +
Sbjct: 325 LLHGKFIHGYVIRSVVNA-----------DIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
+ +WN M+S YI G +A+++Y M + V TF+ + AC+ L + ++G+ +
Sbjct: 374 V-AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
H +S++ + + + +AL+D YSKCG+ +A R F SI +V +WT +I+ Y HG
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQP 492
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC 574
E++ F M G+ P+ T +A+LSAC HAGL+++GL+ F M+ Y + P IEHY+C
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSC 552
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGV-IWGALLNASWFWKDIEVGERAAEKLFSLDPN 633
++D+LGR+GRL EA E I Q P +D + L +A + +G+R A L P+
Sbjct: 553 MIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPD 612
Query: 634 PISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAY 693
S +++L N+YA W +R +++ + LRK PGCSWIE+++ + F ED++H
Sbjct: 613 DASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLR 672
Query: 694 SDVIYATVDHLTATINS 710
++ +Y + L+ + S
Sbjct: 673 AENVYECLALLSGHMES 689
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 203/436 (46%), Gaps = 19/436 (4%)
Query: 187 NAMDLFGKMPVR-DVVAWTTLISGYARRE---DGCERALDLFRCMRRSEVLPNEFTLDCV 242
+A +F +R DV W +L+SGY++ D E L C S +P+ FT V
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNC---SICVPDSFTFPNV 113
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC 302
I+ LG G+++H L +K G D + +L Y + +++ +V++ M E
Sbjct: 114 IKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEM-PERD 172
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFE 358
+ N++I G E+A +F + E N +S + I + +E+ K +
Sbjct: 173 VASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHR 232
Query: 359 KMAPKNL---TSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
K K +N+ ++ +Y K L+ A ++F K ++ V WNSM+ GY+ G
Sbjct: 233 KCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSK 291
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
+++ M S++T + + AC+ + G+ +H ++ ++ A++YV +L+
Sbjct: 292 SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLI 351
Query: 475 DFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAA 534
D Y KCG A+ F+ +W +I+ Y G +++ ++ M+ GV P+
Sbjct: 352 DLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVV 411
Query: 535 TFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQ 594
TF ++L ACS L G +I S+ T + + ++D+ + G KEA N
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNS 470
Query: 595 MPIEADGVIWGALLNA 610
+P + D V W +++A
Sbjct: 471 IP-KKDVVSWTVMISA 485
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 240/536 (44%), Gaps = 55/536 (10%)
Query: 21 RLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQ 80
R+ TL+ S V+++++ + AK + +FDEMP R V+SWNT+IS + Q
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSL-VGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 81 WGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLV 140
G ++AL L M S + N +S + +S+C+R L GK++H +K GFE V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 141 GSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV 200
SAL+ +C + A VF+++ + V W+ M+ GYV + + +++ +M
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM----- 300
Query: 201 VAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
+I G P++ TL ++ C+R L GK +HG
Sbjct: 301 -----IIEG----------------------TRPSQTTLTSILMACSRSRNLLHGKFIHG 333
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
I+ ++ D + +L + Y + A+ V+ + N +I I +G
Sbjct: 334 YVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVA-ESWNVMISSYISVGNWF 392
Query: 321 EA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTM 371
+A +++ G++ + +++ ++ + + +EK K++ ++ L + L+ +
Sbjct: 393 KAVEVYDQMVSVGVK-PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSAL 451
Query: 372 ISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
+ +YSK G EA ++F+ +++ V+W M+S Y +GQ EAL + M++ +
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHL-SKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
T + AC +G + + SK + + + ++D + G L +A
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Query: 491 --TSIFSPNVAAWTALING---YAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
T S N + L + + H LG +LV+ +A+T++ + +
Sbjct: 571 QQTPETSDNAELLSTLFSACCLHLEHSLGDR----IARLLVENYPDDASTYMVLFN 622
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 363 KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
+++ ++I+VY + A +F+ + WNS+MSGY N + L+++
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 423 MRRLSVDHSRS-TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
+ S+ S TF + +A +L G+++H + K+ + +V V ++LV Y+K
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
++ + F + +VA+W +I+ + G +++ LF M G PN+ + +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHY--TCVVDLLGRSGRLKEAEEFINQMPIEA 599
ACS L G EI C + ++ Y + +VD+ G+ L+ A E +MP ++
Sbjct: 217 ACSRLLWLERGKEIHRK---CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS 273
Query: 600 DGVIWGALLNA 610
V W +++
Sbjct: 274 -LVAWNSMIKG 283
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 327 bits (837), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 340/668 (50%), Gaps = 38/668 (5%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K + R +FDEM R V +W T+ISGY++ DE L L M + N +F+A
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
L A G G QVH++++K+G +K V ++L+ ++C + +A +
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI--------- 250
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
LF K V+ VV W ++ISGYA E AL +F MR
Sbjct: 251 ----------------------LFDKTEVKSVVTWNSMISGYAANGLDLE-ALGMFYSMR 287
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
+ V +E + VI++CA L L + +H +K G FD +I AL Y A+
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGY 344
DA R+++ +G + ++I G + EEA +F ++ N +Y++++
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 345 AMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+ S E ++ + ++ T ++ Y K G+++EA K+F +++ V W++M+
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL-CSFQQGQLLHAHLSKTPF 463
+GY G+ A+K++ + + + + TFS + C + S QG+ H K+
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 464 QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
+++ V +AL+ Y+K G++ A+ F ++ +W ++I+GYA HG +++ +F+
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSG 583
M + V + TF+ + +AC+HAGL+ +G + F M ++ PT EH +C+VDL R+G
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSN 643
+L++A + I MP A IW +L A K E+G AAEK+ ++ P + +V+LSN
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706
Query: 644 MYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDH 703
MYA G W ++ +RK + ++K+PG SWIE+ N + F D++H D IY ++
Sbjct: 707 MYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLED 766
Query: 704 LTATINSI 711
L+ + +
Sbjct: 767 LSTRLKDL 774
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/571 (26%), Positives = 271/571 (47%), Gaps = 50/571 (8%)
Query: 50 TGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAV 109
+ L A ++FD+ P R S+ +++ G+S+ GR EA L +HR ++++ FS+V
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
L A G+Q+H +K GF VG++L+ ++ + VF+E+++
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--- 156
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRR 229
R+VV WTTLISGYAR E L LF M+
Sbjct: 157 ----------------------------RNVVTWTTLISGYARNSMNDE-VLTLFMRMQN 187
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
PN FT + + A G G VH + +K+GLD + +L Y +
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYA 345
A+ +++ ++ + NS+I G G EA +FY +R + S+ +IK A
Sbjct: 248 ARILFDKTEVKSVV-TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Query: 346 MSSQIEKSKRL------FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
++ +++L + + +N+ + ++ YSK + +A++LF + N V+
Sbjct: 307 NLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
W +M+SG++ N EA+ L+ M+R V + T+SV+ A + + +HA +
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVV 420
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
KT ++ + VGTAL+D Y K G + +A + F+ I ++ AW+A++ GYA G +I
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
+F + G+ PN TF +IL+ C+ + FH I R+ ++ + ++ +
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 580 GRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ G ++ AEE + E D V W ++++
Sbjct: 541 AKKGNIESAEEVFKRQR-EKDLVSWNSMISG 570
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 240/512 (46%), Gaps = 45/512 (8%)
Query: 178 GYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERALDLFRCMRRSEVLPNE 236
G V + NA +LF K P RD ++ +L+ G++R DG + A LF + R + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSR--DGRTQEAKRLFLNIHRLGMEMDC 93
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
V+++ A L G+ +H CIK G D S+G +L + Y D ++V++
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 297 MGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE--TNPISYNLM----------IKGY 344
M E + +LI G +E +F ++ T P S+ + G
Sbjct: 154 M-KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 345 AMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+ K +K P + N++I++Y K G + +A LFDKT+ ++ VTWNSM+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVS----NSLINLYLKCGNVRKARILFDKTE-VKSVVTWNSMI 267
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
SGY NG EAL ++ +MR V S S+F+ + + C +L + + LH + K F
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL 327
Query: 465 ANVYVGTALVDFYSKCGHLADAQRSFTSIFS-PNVAAWTALINGYAYHGLGSESILLFRS 523
+ + TAL+ YSKC + DA R F I NV +WTA+I+G+ + E++ LF
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSG 583
M +GV PN T+ IL+A +++ ++ Y + T+ T ++D + G
Sbjct: 388 MKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLG 442
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGE-RAAEKLF------SLDPNPIS 636
+++EA + + + + D V W A+L + GE AA K+F + PN +
Sbjct: 443 KVEEAAKVFSGID-DKDIVAWSAMLAGY-----AQTGETEAAIKMFGELTKGGIKPNEFT 496
Query: 637 GFVILSNMYAILGRWGQKT-----TIRKRLQS 663
IL+ A GQ I+ RL S
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 189/415 (45%), Gaps = 54/415 (13%)
Query: 7 FCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIA---HRAKTGELAEARHMFDEM 63
F V C +++ R FT L S + + NI A +K + +A +F E+
Sbjct: 298 FASVIKLCANLKELR-FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 64 P-LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLG 122
+ V SW MISG+ Q +EA+ L S M R V+ NE ++S +L++ +
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISP 412
Query: 123 KQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQR 182
+VH+ ++K+ +E+ VG+ALL V+ + EA VF + D + V WS ML+GY Q
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 183 DMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCV 242
A+ +FG++ + + PNEFT +
Sbjct: 473 GETEAAIKMFGELT--------------------------------KGGIKPNEFTFSSI 500
Query: 243 IRICARLGA-LHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
+ +CA A + GK HG IK LD + AL Y + I+ A+ V++ E
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REK 559
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLF 357
L NS+I G G+ +A +F ++ + + +++ + + +E+ ++ F
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 358 E------KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+ K+AP + + M+ +YS+ G+L++A+K+ + S W ++++
Sbjct: 620 DIMVRDCKIAPTKEHN-SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G + A +F + + SWN+MISGY+Q G+ +AL + M + VK++ ++F
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKS-GFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
V ++C +G + G++ ++++ S ++ R + +A V E + +
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 167 -GNHVLWSLMLSG---YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
+W +L+ + + ++ A + M D A+ L + YA D ERA
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERA 718
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 201/670 (30%), Positives = 336/670 (50%), Gaps = 76/670 (11%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
IA AK+G +A AR +FD MP +WNTM++ YS+ G + EA+AL + + S K ++
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEE 163
SF+A+LS+CA G++ G+++ SL+++SGF V ++L+ +C A VF +
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 164 L--RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERAL 221
+ N V W +L Y+ + A+D+F +MP R AW +ISG+A E L
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC-GKLESCL 189
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRIC-ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
LF+ M SE P+ +T ++ C A + G++VH + +K+G ++ F
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVA-NSLIGGLILMGRIEEAELIFYGLRETNPISYNL 339
Y + DDA R ES+ E V+ NS+I + +G E+A +F+
Sbjct: 250 YTKLGSRDDAMRELESI--EVLTQVSWNSIIDACMKIGETEKALEVFH------------ 295
Query: 340 MIKGYAMSSQIEKSKRLFEKMAP-KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV 398
+AP KN+ + TMI+ Y +NG+ GE
Sbjct: 296 --------------------LAPEKNIVTWTTMITGYGRNGD------------GE---- 319
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
+AL+ +V M + VD + + AC+ L G+++H L
Sbjct: 320 ----------------QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
FQ YVG ALV+ Y+KCG + +A R+F I + ++ +W ++ + HGL +++
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQAL 423
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
L+ +M+ G+ P+ TF+ +L+ CSH+GL+ +G IF SM YR+ ++H TC++D+
Sbjct: 424 KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDM 483
Query: 579 LGRSGRLKEAEE----FINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNP 634
GR G L EA++ + + + ++ W LL A E+G ++ L +P+
Sbjct: 484 FGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSE 543
Query: 635 ISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYS 694
FV+LSN+Y GRW + +R+ + ++K PGCSWIE+ N + F V D +H
Sbjct: 544 EMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRL 603
Query: 695 DVIYATVDHL 704
+ + T++ L
Sbjct: 604 EELSETLNCL 613
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
+S N I K GE +A +F P + + +W TMI+GY + G ++AL M +S
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
V + ++ AVL +C+ L GK +H L+ GF+ + VG+AL+ +C I EA
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV-------VAWTTLISGY 210
+ F ++ + + V W+ ML + + A+ L+ M + + T S
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFT-LDCVIRICARLGALHAGK 256
E+GC +F M + +P E + C+I + R G L K
Sbjct: 452 GLVEEGCM----IFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 43/323 (13%)
Query: 365 LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
L L + I+ +K+G + A ++FD E ++V WN+M++ Y G H EA+ L+ +R
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMP-ELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
+F+ + C SL + + G+ + + + ++ F A++ V +L+D Y KC
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 485 DAQRSFTSI--------------------------------FSPNVA-AWTALINGYAYH 511
A + F + VA AW +I+G+A+
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 512 GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH 571
G + LF+ ML P+ TF ++++ACS + H++ + + +E
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 572 YTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGE-RAAEKLFSL 630
V+ + G +A + + + V W ++++A +++GE A ++F L
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQ-VSWNSIIDAC-----MKIGETEKALEVFHL 296
Query: 631 DPNPISGFVILSNMYAILGRWGQ 653
P V + M GR G
Sbjct: 297 APEK--NIVTWTTMITGYGRNGD 317
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/699 (31%), Positives = 356/699 (50%), Gaps = 66/699 (9%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPL---RTVSSWNTMISGYSQWGRYDEALAL 90
P + N I+ +K+G+ A+A +F+ M R V SW+ M++ Y GR +A+ +
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 91 -ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG-FEKFGLVGSALLYFC 148
F+ V N+ ++AV+ +C+ S + +G+ L+K+G FE VG +L+
Sbjct: 154 FVEFLELGLVP-NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
V+ E FE NA +F KM +VV WT +I+
Sbjct: 213 VK------GENSFE------------------------NAYKVFDKMSELNVVTWTLMIT 242
Query: 209 -----GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
G+ R A+ F M S ++FTL V CA L L GK +H I
Sbjct: 243 RCMQMGFPRE------AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 264 KDGLDFDNSIGGALAEFY--CDRD-AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
+ GL D + +L + Y C D ++DD ++V++ M + ++ + G +
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 321 EA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL----FEKMAPKNLTSLNTM 371
EA E+I G E N +++ K S K++ F++ N + N++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 372 ISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY--VTMRRLSVD 429
IS++ K+ +++A + F+ + E+N V++N+ + G N +A KL +T R L V
Sbjct: 415 ISMFVKSDRMEDAQRAFE-SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV- 472
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
S TF+ L ++ S ++G+ +H+ + K N V AL+ YSKCG + A R
Sbjct: 473 -SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
F + + NV +WT++I G+A HG + F M+ +GV PN T+VAILSACSH GL+
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
++G F+SM +++ P +EHY C+VDLL R+G L +A EFIN MP +AD ++W L
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 610 ASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKD 669
A + E+G+ AA K+ LDPN + ++ LSN+YA G+W + T +R++++ L K+
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 670 PGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATI 708
GCSWIE+ + IH F V D H + IY +D L I
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
TFS L ++C F+ G+L+HA L + + + + +L+ YSK G A A+ F ++
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 494 F---SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
+V +W+A++ Y +G ++I +F L G++PN + A++ ACS++ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 551 DG 552
G
Sbjct: 184 VG 185
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 219/687 (31%), Positives = 351/687 (51%), Gaps = 80/687 (11%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV---- 99
++ AKTG L EAR +F+ MP R + + N M++GY + R +EA L M ++ V
Sbjct: 84 LSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTV 143
Query: 100 ----------------------KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
+ N +S++ +++ R+G + KQV + +
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSW 203
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
+A++ + G+ EA+L+F ++ + N V W+ M+ GY + + A LF +MP
Sbjct: 204 ----NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRS--EVLPNEFTLDCVIRICARLGA--LH 253
R++V+WT +ISG+A E E AL LF M++ V PN TL + C LG
Sbjct: 260 RNIVSWTAMISGFAWNELYRE-ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 254 AGKVVHGLCIKDG---LDFDNSIGGALAEFYCDRDAIDDAKRVY-ESMGGEACLNVANSL 309
G+ +H I +G +D D + +L Y I A+ + ES ++C N +
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC----NII 374
Query: 310 IGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN 369
I + G +E AE +F E+ K L +K+ S
Sbjct: 375 INRYLKNGDLERAETLF------------------------ERVKSLHDKV------SWT 404
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
+MI Y + G++ A LF K +++ VTW M+SG + N +EA L M R +
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLH-DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP--FQANVYVGTALVDFYSKCGHLADAQ 487
ST+SVL + + + QG+ +H ++KT + ++ + +LV Y+KCG + DA
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
F + + +W ++I G ++HGL +++ LF+ ML G PN+ TF+ +LSACSH+G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
L+ GLE+F +M+ Y + P I+HY ++DLLGR+G+LKEAEEFI+ +P D ++GAL
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 608 L---NASWFWKDIE-VGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQS 663
L +W KD E + ERAA +L LDP G V L N+YA LGR + +RK +
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 664 LELRKDPGCSWIELNNNIHMFSVEDKT 690
++K PGCSW+ +N ++F DK+
Sbjct: 704 KGVKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 55/355 (15%)
Query: 252 LHAGKVVHGLCIKDGLDFDNSIG-----GALAEFYCDRDAIDDAKRVYESMGGEACLNVA 306
L G +VH + D + SI +L Y +D+A+ ++E M E +
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP-ERNIVTC 111
Query: 307 NSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT 366
N+++ G + R+ EA +F + + N +S+ +M+ + E + LF++M +N+
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 367 SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
S NT+++ +NG++++A ++FD R+ V+WN+M+ GYI N EA
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMP-SRDVVSWNAMIKGYIENDGMEEA---------- 219
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+LL +S + NV T++V Y + G + +A
Sbjct: 220 -------------------------KLLFGDMS----EKNVVTWTSMVYGYCRYGDVREA 250
Query: 487 QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSML--VQGVLPNAATFVAILSACS 544
R F + N+ +WTA+I+G+A++ L E+++LF M V V PN T +++ AC
Sbjct: 251 YRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACG 310
Query: 545 HAGLLNDGL-EIFHSMQICYRVTPTIEH----YTCVVDLLGRSGRLKEAEEFINQ 594
G+ L E H+ Q+ T++H +V + SG + A+ +N+
Sbjct: 311 GLGVEFRRLGEQLHA-QVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
+ P +I N ++ AK G + +A +F +M + SWN+MI G S G D+AL L
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
M S K N ++F VLS+C+ SG + G ++
Sbjct: 559 EMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 219/745 (29%), Positives = 352/745 (47%), Gaps = 91/745 (12%)
Query: 19 KFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGY 78
+F LFT P V ++ AK G +A+AR +FD M R + +W+ MI Y
Sbjct: 106 RFGLFT---------EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 79 SQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFG 138
S+ R+ E L M + V ++ F +L CA G + GK +HS+++K G
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 139 LVGSALLYFCVRCCGIGEAELVFEELRD----------------GNH------------- 169
V +++L +C + A F +R+ G H
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 170 ------VLWSLMLSGYVQRDMMGNAMDLFGKMPV----RDVVAWTTLISGYARREDGCE- 218
V W++++ GY Q AMDL KM DV WT +ISG +G
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLI--HNGMRY 334
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
+ALD+FR M + V+PN T+ + C+ L ++ G VH + +K G D +G +L
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN 338
+ Y C G++E+A +F ++ + ++N
Sbjct: 395 DMY------------------SKC--------------GKLEDARKVFDSVKNKDVYTWN 422
Query: 339 LMIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKT--- 391
MI GY + K+ LF +M NL + NTMIS Y KNG+ EA+ LF +
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 392 -KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
K +RN+ TWN +++GYI NG+ EAL+L+ M+ + T L AC +L +
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
+ +H + + A V AL D Y+K G + ++ F + + ++ W +LI GY
Sbjct: 543 VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVL 602
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
HG ++ LF M QG+ PN T +I+ A G +++G ++F+S+ Y + P +E
Sbjct: 603 HGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALE 662
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSL 630
H + +V L GR+ RL+EA +FI +M I+++ IW + L DI++ AAE LFSL
Sbjct: 663 HCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722
Query: 631 DPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKT 690
+P + I+S +YA+ + G+ K + L+K G SWIE+ N IH F+ D++
Sbjct: 723 EPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS 782
Query: 691 HAYSDVIYATVDHLTATINSIIPFN 715
+DV+Y V+ ++ N +N
Sbjct: 783 KLCTDVLYPLVEKMSRLDNRSDQYN 807
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 86/510 (16%)
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-------VGSALLYFCVRCC 152
K+ ++ +L SC SGS+ LG+ +H+ +FGL V + LL +C
Sbjct: 78 KVKRSTYLKLLESCIDSGSIHLGRILHA--------RFGLFTEPDVFVETKLLSMYAKCG 129
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
I +A VF+ +R+ N WS M+ Y
Sbjct: 130 CIADARKVFDSMRERNLFTWSAMIGAY--------------------------------S 157
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
RE+ LFR M + VLP++F +++ CA G + AGKV+H + IK
Sbjct: 158 RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK-------- 209
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET 332
+G +CL V+NS++ G ++ A F +RE
Sbjct: 210 ------------------------LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER 245
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLF 388
+ I++N ++ Y + + E++ L ++M + L + N +I Y++ G+ D A+ L
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 389 DKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
K + + TW +M+SG IHNG +AL ++ M V + T AC+ L
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 446 CSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 505
QG +H+ K F +V VG +LVD YSKCG L DA++ F S+ + +V W ++I
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMI 425
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
GY G ++ LF M + PN T+ ++S G + +++F M+ +V
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
+ ++ ++G+ EA E +M
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 144/330 (43%), Gaps = 33/330 (10%)
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
Y +++E S L K KNL+ TK + ++ +
Sbjct: 16 YQTPAKVENSPELHPKSRKKNLSF-----------------------TKKKEPNIIPDEQ 52
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
NG EA K ++ + RST+ L +C S G++LHA
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT- 111
Query: 464 QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
+ +V+V T L+ Y+KCG +ADA++ F S+ N+ W+A+I Y+ E LFR
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSG 583
M+ GVLP+ F IL C++ G + G ++ HS+ I ++ + ++ + + G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPIS-GFV--- 639
L A +F +M E D + W ++L A + E A E + ++ IS G V
Sbjct: 231 ELDFATKFFRRMR-ERDVIAWNSVLLA---YCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 640 ILSNMYAILGRWGQKTTIRKRLQSLELRKD 669
IL Y LG+ + +++++ + D
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITAD 316
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 331/654 (50%), Gaps = 50/654 (7%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
I+ A+ G++++A +FDEMP+R +S+N MI+ + + D A F + N
Sbjct: 88 ISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIK-NKCDLGKAYELFC--DIPEKNA 144
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF--GLVGSALLYFCVRCCGIGEAELVF 161
+S++ +++ R+G L KF + + LL +R EA VF
Sbjct: 145 VSYATMITGFVRAGRF----DEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVF 200
Query: 162 EELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR---EDGCE 218
+ + V S M+ GY + + +A LF +M R+V+ WT +I GY + EDG
Sbjct: 201 QGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG-- 258
Query: 219 RALDLFRCMRRS-EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
LF MR+ +V N TL + + C G +HGL + L+FD +G +L
Sbjct: 259 --FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSL 316
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
Y +G + EA+ +F ++ + +S+
Sbjct: 317 MSMYSK--------------------------------LGYMGEAKAVFGVMKNKDSVSW 344
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
N +I G QI ++ LFEKM K++ S MI +S GE+ + V+LF E+++
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP-EKDN 403
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
+TW +M+S ++ NG + EAL + M + V + TFS + A SL +G +H
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
+ K ++ V +LV Y KCG+ DA + F+ I PN+ ++ +I+GY+Y+G G ++
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKA 523
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ LF + G PN TF+A+LSAC H G ++ G + F SM+ Y + P +HY C+VD
Sbjct: 524 LKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVD 583
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG 637
LLGRSG L +A I+ MP + +WG+LL+AS +++ E AA+KL L+P+ +
Sbjct: 584 LLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATP 643
Query: 638 FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTH 691
+V+LS +Y+I+G+ I +S ++KDPG SWI L +H F D++
Sbjct: 644 YVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 187/415 (45%), Gaps = 49/415 (11%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
V+S + + K G + +AR +FD M R V +W MI GY + G +++ L M
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 96 RSC-VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
+ VK+N + + + +C G Q+H L+ + E +G++L+ + +
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
GEA+ VF +++ + V W+ +++G VQR + A +LF KMP +D+V+WT +I G++ +
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKG 386
Query: 215 D--GC----------------------------ERALDLFRCMRRSEVLPNEFTLDCVIR 244
+ C E AL F M + EV PN +T V+
Sbjct: 387 EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
A L L G +HG +K + D S+ +L YC +DA +++ + E +
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI-SEPNIV 505
Query: 305 VANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
N++I G G ++A +F L +E N +++ ++ ++ + F+ M
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 361 APKNLTSLNT---------MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+S N M+ + ++G LD+A L + +S W S++S
Sbjct: 566 K----SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA 616
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 190/446 (42%), Gaps = 78/446 (17%)
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
R + EAE +F ++ + + V W M+S Y + M A +F +MPVR ++ +I+
Sbjct: 62 RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
+ + +A +LF C +P + + I G + AG+ F
Sbjct: 122 MIKNKCDLGKAYELF-C-----DIPEKNAVSYATMIT---GFVRAGR------------F 160
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
D AEF + V +N L+ G + G+ EA +F G+
Sbjct: 161 DE------AEFLYAETPVKFRDSV-----------ASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
+S + M+ GY +I ++ LF++M +N+ + MI Y K G ++ LF
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
+ + E + V + +T +V+F+AC ++
Sbjct: 264 RMRQEGD-------------------------------VKVNSNTLAVMFKACRDFVRYR 292
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
+G +H +S+ P + ++++G +L+ YSK G++ +A+ F + + + +W +LI G
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
SE+ LF M + ++ ++ ++ S G ++ +E+F M +T
Sbjct: 353 QRKQISEAYELFEKMPGKDMV----SWTDMIKGFSGKGEISKCVELFGMMPEKDNIT--- 405
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQM 595
+T ++ +G +EA + ++M
Sbjct: 406 --WTAMISAFVSNGYYEEALCWFHKM 429
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 145/333 (43%), Gaps = 23/333 (6%)
Query: 307 NSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT 366
NS I G ++EAE IF + + +S+ MI YA + ++ K+ ++F++M + T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 367 SLNTMISVYSKNG-ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRR 425
S N MI+ KN +L +A +LF E+N+V++ +M++G++ G+ EA LY
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIP-EKNAVSYATMITGFVRAGRFDEAEFLYAET-- 170
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT--PFQA----NVYVGTALVDFYSK 479
V FR + G L ++ FQ V +++V Y K
Sbjct: 171 ----------PVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCK 220
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVA 538
G + DA+ F + NV WTA+I+GY G + LF M +G V N+ T
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+ AC +G +I H + + + ++ + + G + EA+ M
Sbjct: 281 MFKACRDFVRYREGSQI-HGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-N 338
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEKLFSLD 631
D V W +L+ K I EK+ D
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKD 371
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 214/703 (30%), Positives = 341/703 (48%), Gaps = 114/703 (16%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS-FMHRSCVKLNEISFSAV 109
G +A ARH FD + R V +WN MISGY + G E + S FM S + + +F +V
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
L +C ++ G ++H L LK GF V ++L++
Sbjct: 160 LKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHL---------------------- 194
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRR 229
Y + +GNA LF +MPVRD+ +W +ISGY + + E AL L +R
Sbjct: 195 ---------YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE-ALTLSNGLRA 244
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
+ + T+ ++ C G + G +H IK GL
Sbjct: 245 MDSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGL---------------------- 278
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQ 349
E+ L V+N LI GR+ + + +F + + IS+N +IK Y ++ Q
Sbjct: 279 ----------ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 350 IEKSKRLFEKM-----APKNLTSL-----------------------------------N 369
++ LF++M P LT + N
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL-SV 428
++ +Y+K G +D A +F+ + ++WN+++SGY NG SEA+++Y M +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
++ T+ + AC+ + +QG LH L K +V+V T+L D Y KCG L DA
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F I N W LI + +HG G ++++LF+ ML +GV P+ TFV +LSACSH+GL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+++G F MQ Y +TP+++HY C+VD+ GR+G+L+ A +FI M ++ D IWGALL
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
+A ++++G+ A+E LF ++P + V+LSNMYA G+W IR LRK
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
Query: 669 DPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
PG S +E++N + +F ++TH + +Y + L A + I
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 220/492 (44%), Gaps = 58/492 (11%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
+V ++ I + R K + AR +FDEMP+R + SWN MISGY Q G EAL L++ +
Sbjct: 186 YVAASLIHLYSRYKA--VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
++ ++ ++LS+C +G G +HS +K G E V + L+
Sbjct: 244 ----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE----- 294
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
F LRD V F +M VRD+++W ++I Y E
Sbjct: 295 -----FGRLRDCQKV---------------------FDRMYVRDLISWNSIIKAYELNEQ 328
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN-SIG 274
RA+ LF+ MR S + P+ TL + I ++LG + A + V G ++ G ++ +IG
Sbjct: 329 PL-RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
A+ Y +D A+ V+ + ++ N++I G G EA ++ + E
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVIS-WNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 335 ISYNLMI---------KGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAV 385
I+ N + A+ ++ RL + ++ + ++ +Y K G L++A+
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 386 KLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
LF + NSV WN++++ + +G +A+ L+ M V TF L AC+
Sbjct: 507 SLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 446 CSFQQGQ----LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAA 500
+GQ ++ TP + +VD Y + G L A + S+ P+ +
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHY---GCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 501 WTALINGYAYHG 512
W AL++ HG
Sbjct: 623 WGALLSACRVHG 634
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
LFR CT+L Q + LHA L + NV + LV+ Y G++A A+ +F I +
Sbjct: 59 TLFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 497 NVAAWTALINGYAYHGLGSESILLFR-SMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
+V AW +I+GY G SE I F ML G+ P+ TF ++L AC + DG +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI 172
Query: 556 FHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
H + + + + ++ L R + A ++MP+ G W A+++
Sbjct: 173 -HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISG 225
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 207/696 (29%), Positives = 352/696 (50%), Gaps = 64/696 (9%)
Query: 26 LLRDSEPHHPHVISTNISIAHR--AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGR 83
+LRD V ++ A R A + + +A +FDEM WN MI G++ G
Sbjct: 51 VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGL 110
Query: 84 YDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSA 143
Y EA+ S M + VK + ++ V+ S A SL GK++H++++K GF V ++
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNS 170
Query: 144 LLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAW 203
L+ ++ +AE VFEE MP RD+V+W
Sbjct: 171 LISLYMKLGCAWDAEKVFEE-------------------------------MPERDIVSW 199
Query: 204 TTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
++ISGY DG +L LF+ M + P+ F+ + C+ + + GK +H +
Sbjct: 200 NSMISGYLALGDGFS-SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 264 KDGLDF-DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA 322
+ ++ D + ++ + Y + A+R++ M + + N +IG GR+ +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI-QRNIVAWNVMIGCYARNGRVTDA 317
Query: 323 ELIFYGLRETNPI------SYNLM----------IKGYAMSSQIEKSKRLFEKMAPKNLT 366
L F + E N + S NL+ I GYAM +R F ++
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAM-------RRGF----LPHMV 366
Query: 367 SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
+I +Y + G+L A +FD+ E+N ++WNS+++ Y+ NG++ AL+L+ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRM-AEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
S+ +T + + A S +G+ +HA++ K+ + +N + +LV Y+ CG L DA
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 487 QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHA 546
++ F I +V +W ++I YA HG G S+ LF M+ V PN +TF ++L+ACS +
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545
Query: 547 GLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGA 606
G++++G E F SM+ Y + P IEHY C++DL+GR+G A+ F+ +MP IWG+
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGS 605
Query: 607 LLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLEL 666
LLNAS KDI + E AAE++F ++ + +V+L NMYA GRW I+ ++S +
Sbjct: 606 LLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
Query: 667 RKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVD 702
+ S +E H+F+ D++H ++ IY +D
Sbjct: 666 SRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 336/688 (48%), Gaps = 50/688 (7%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
+ +TNI + K G +A ++FDEMP R S+ T+ GY+ + + L S +HR
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHR 139
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
+LN F++ L + +HS ++K G++ VG+AL+ C +
Sbjct: 140 EGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDS 199
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A VFE + +D+V W ++S Y E+G
Sbjct: 200 ARTVFEGIL-------------------------------CKDIVVWAGIVSCYV--ENG 226
Query: 217 C-ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
E +L L CMR + +PN +T D ++ LGA K VHG +K D +G
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI 335
L + Y + DA +V+ M + + +I G EA +F +RE +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWS-FMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMA--------PKNLTSLNTMISVYSKNGELDEAVKL 387
+ I K L E++ ++ N +I VY+K ++D AVKL
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
F + +N V+WN+++ GY + G+ +A ++ R V + TFS AC SL S
Sbjct: 406 FAELS-SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
G +H KT V V +L+D Y+KCG + AQ F + + +VA+W ALI+G
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
Y+ HGLG +++ + M + PN TF+ +LS CS+AGL++ G E F SM + + P
Sbjct: 525 YSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL 627
+EHYTC+V LLGRSG+L +A + I +P E +IW A+L+AS + E R+AE++
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 628 FSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVE 687
++P + +V++SNMYA +W +IRK ++ + ++K+PG SWIE ++H FSV
Sbjct: 645 LKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVG 704
Query: 688 DKTHAYSDVIYATVD--HLTATINSIIP 713
H +I ++ ++ AT +P
Sbjct: 705 LSDHPDMKLINGMLEWLNMKATRAGYVP 732
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 356 LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE 415
+ +K + +L + N +++ Y K G +A+ LFD+ ERN+V++ ++ GY +
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP-ERNNVSFVTLAQGY----ACQD 129
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
+ LY + R + + F+ + SL + LH+ + K + +N +VG AL++
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
YS CG + A+ F I ++ W +++ Y +G +S+ L M + G +PN T
Sbjct: 190 AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 536 FVAILSACSHAGLLNDGLEIF-HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQ 594
F L A G + + ++ CY + P + ++ L + G + +A + N+
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNE 307
Query: 595 MPIEADGVIWGALL 608
MP + D V W ++
Sbjct: 308 MP-KNDVVPWSFMI 320
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 287/520 (55%), Gaps = 5/520 (0%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A+ +F ++ +V +LI +A+ + A +F M+R + + FT +++ C+
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQ-AFFVFSEMQRFGLFADNFTYPFLLKACS 128
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY--CDRDAIDDAKRVYESMGGEACLNV 305
L K++H K GL D + AL + Y C + DA +++E M ++
Sbjct: 129 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS- 187
Query: 306 ANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
NS++GGL+ G + +A +F + + + IS+N M+ GYA ++ K+ LFEKM +N
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNT 247
Query: 366 TSLNTMISVYSKNGELDEAVKLFDKTK-GERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
S +TM+ YSK G+++ A +FDK +N VTW +++GY G EA +L M
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
+ + + ACT G +H+ L ++ +N YV AL+D Y+KCG+L
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 485 DAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS 544
A F I ++ +W +++G HG G E+I LF M +G+ P+ TF+A+L +C+
Sbjct: 368 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 545 HAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIW 604
HAGL+++G++ F+SM+ Y + P +EHY C+VDLLGR GRLKEA + + MP+E + VIW
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 605 GALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSL 664
GALL A ++++ + + L LDP + +LSN+YA W IR +++S+
Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 547
Query: 665 ELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
+ K G S +EL + IH F+V DK+H SD IY + L
Sbjct: 548 GVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 227/514 (44%), Gaps = 46/514 (8%)
Query: 6 RFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPL 65
R + C + +L ++R + H+ IS + LA +F+++
Sbjct: 22 RLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAV--RVFNQVQE 79
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
V N++I ++Q + +A + S M R + + ++ +L +C+ L + K +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIG--EAELVFEELRDGNHVLWSLMLSGYVQRD 183
H+ + K G V +AL+ RC G+G +A +FE++ + + V W+ ML G V+
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAG 199
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYAR-REDGCERALDLFRCMRRSEVLPNEFTLDCV 242
+ +A LF +MP RD+++W T++ GYAR RE +A +LF M N + +
Sbjct: 200 ELRDARRLFDEMPQRDLISWNTMLDGYARCRE--MSKAFELFEKMPER----NTVSWSTM 253
Query: 243 IRICARLGALHAGKVVHG---LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
+ ++ G + +V+ L K+ + + I G Y ++ + +A R+ + M
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG-----YAEKGLLKEADRLVDQMVA 308
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEK 359
A ++I ++ E+ L+ G+R + S +++S
Sbjct: 309 SGLKFDAAAVIS---ILAACTESGLLSLGMR---------------IHSILKRSN----- 345
Query: 360 MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKL 419
N LN ++ +Y+K G L +A +F+ +++ V+WN+M+ G +G EA++L
Sbjct: 346 -LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYS 478
+ MRR + + TF + +C +G + K V LVD
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 479 KCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
+ G L +A + ++ PNV W AL+ H
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 178/403 (44%), Gaps = 69/403 (17%)
Query: 14 CKRVEK-FRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPL--RTVSS 70
C+ + K F LF + P + +S + + +K G++ AR MFD+MPL + V +
Sbjct: 229 CREMSKAFELFEKM-----PER-NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT 282
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
W +I+GY++ G EA L M S +K + + ++L++C SG L LG ++HS+L
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
+S V +ALL +C + +A VF ++ + V W+ ML G +G
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG------LG---- 392
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+ G+ + A++LF MRR + P++ T V+ C
Sbjct: 393 ----------------VHGHGK------EAIELFSRMRREGIRPDKVTFIAVLCSCN--- 427
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIG------------GALAEFYCDRDAIDDAKRVYESMG 298
HAG I +G+D+ S+ G L + + +A +V ++M
Sbjct: 428 --HAG------LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP 479
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI---SYNLMIKGYAMSSQIEKSKR 355
E + + +L+G + ++ A+ + L + +P +Y+L+ YA + E
Sbjct: 480 MEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD 539
Query: 356 LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV 398
+ KM + + SV ++G + V FDK+ + + +
Sbjct: 540 IRSKMKSMGVEKPSGASSVELEDGIHEFTV--FDKSHPKSDQI 580
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
SR F + + Q + LHA + + ++++ L+ S C A R F
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 491 TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
+ PNV +LI +A + ++ +F M G+ + T+ +L ACS L
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWL- 133
Query: 551 DGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL--KEAEEFINQMPIEADGVIWGALL 608
+++ H+ ++ I ++D R G L ++A + +M E D V W ++L
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSML 192
Query: 609 NASWFWKDIEVGE-RAAEKLFSLDPN 633
++ GE R A +LF P
Sbjct: 193 GGL-----VKAGELRDARRLFDEMPQ 213
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 327/651 (50%), Gaps = 51/651 (7%)
Query: 41 NISIAHRAKT-----GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
+ISIA + + G +AR +FD++P W M+ Y E + L +
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK-SGFEKFGLVGSALLYFCVRCCGI 154
+ + ++I FS L +C L GK++H L+K F+ L G LL +C I
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEI 192
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
A VF ++ +R+VV WT++I+GY +
Sbjct: 193 KSAHKVFNDI-------------------------------TLRNVVCWTSMIAGYVKN- 220
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
D CE L LF MR + VL NE+T +I C +L ALH GK HG +K G++ + +
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR---- 330
+L + Y I +A+RV+ L + ++I G G + EA +F ++
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 331 ETNPISYNLMIKGYAMSSQIEKSKR---LFEKMAPKNLTSLNTMISVYSKNGELDEAVKL 387
+ N ++ ++ G + +E + L K+ + N ++ +Y+K + +A +
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYV 399
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
F+ + E++ V WNS++SG+ NG EAL L+ M SV + T + LF AC SL S
Sbjct: 400 FE-MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 448 FQQGQLLHAHLSKTPFQAN--VYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 505
G LHA+ K F A+ V+VGTAL+DFY+KCG A+ F +I N W+A+I
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
GY G S+ LF ML + PN +TF +ILSAC H G++N+G + F SM Y
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAE 625
TP+ +HYTC+VD+L R+G L++A + I +MPI+ D +GA L+ ++GE +
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Query: 626 KLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIE 676
K+ L P+ S +V++SN+YA GRW Q +R ++ L K G S +E
Sbjct: 639 KMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 231/522 (44%), Gaps = 50/522 (9%)
Query: 32 PHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALA 91
P +V+ T + + AK GE+ A +F+++ LR V W +MI+GY + +E L L
Sbjct: 172 PSFDNVVLTGL-LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
+ M + V NE ++ ++ +C + +L GK H L+KSG E + ++LL V+C
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC 290
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
I A VF E + V+W+ M+ GY + A+ LF K
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK----------------- 333
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
M+ E+ PN T+ V+ C + L G+ VHGL IK G+ +D
Sbjct: 334 ---------------MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDT 377
Query: 272 SIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY---- 327
++ AL Y DAK V+E M E + NS+I G G I EA +F+
Sbjct: 378 NVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Query: 328 ------GLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGEL 381
G+ + S + A+ S + +A ++ ++ Y+K G+
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDP 496
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
A +FD T E+N++TW++M+ GY G +L+L+ M + + STF+ + A
Sbjct: 497 QSARLIFD-TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 442 CTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVA 499
C +G+ + + K F + T +VD ++ G L A + P+V
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
+ A ++G H ++ + ML + P+ A++ ++S
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 655
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 172/366 (46%), Gaps = 26/366 (7%)
Query: 259 HGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA-----------CLNVAN 307
HG+ +GL D SI L Y DA+ V++ + CLN +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL---FEKMAPKN 364
+ L + L+ +G R + I ++ +K ++ K++ K+ +
Sbjct: 124 VEVVKLYDL-------LMKHGFR-YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD 175
Query: 365 LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
L ++ +Y+K GE+ A K+F+ RN V W SM++GY+ N E L L+ MR
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDIT-LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
+V + T+ L ACT L + QG+ H L K+ + + + T+L+D Y KCG ++
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 485 DAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS 544
+A+R F ++ WTA+I GY ++G +E++ LF+ M + PN T ++LS C
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 545 HAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIW 604
L G + H + I + T +V + + + ++A +++ +M E D V W
Sbjct: 355 LIENLELGRSV-HGLSIKVGIWDT-NVANALVHMYAKCYQNRDA-KYVFEMESEKDIVAW 411
Query: 605 GALLNA 610
++++
Sbjct: 412 NSIISG 417
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/675 (28%), Positives = 340/675 (50%), Gaps = 56/675 (8%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K EL AR +FD MP R + S+N++ISGY+Q G Y++A+ L + +KL++ +++
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
L C L LG+ +H L++ +G ++ VF
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGL----------------------SQQVF------- 184
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
L ++++ Y + + AM LF + RD V+W +LISGY R E L+L M
Sbjct: 185 --LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV-GAAEEPLNLLAKMH 241
Query: 229 RSEVLPNEFTLDCVIRICA---RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
R + + L V++ C G + G +H K G++FD + AL + Y
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRI-----EEAELIFYGLR----ETNPIS 336
++ +A +++ M + + N++I G + M I EA +F ++ E +P +
Sbjct: 302 SLKEAIKLFSLMPSKNVVTY-NAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL----NTMISVYSKNGELDEAVKLFDKTK 392
+++++K + + +E +++ + N S + +I +Y+ G ++ ++ F T
Sbjct: 361 FSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Query: 393 GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS---TFSVLFRACTSLCSFQ 449
+++ +W SM+ ++ N Q A L+ R+L H R T S++ AC +
Sbjct: 421 -KQDIASWTSMIDCHVQNEQLESAFDLF---RQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
G+ + + K+ A V T+ + Y+K G++ A + F + +P+VA ++A+I+ A
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
HG +E++ +F SM G+ PN F+ +L AC H GL+ GL+ F M+ YR+ P
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNE 596
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
+H+TC+VDLLGR+GRL +AE I + V W ALL++ +KD +G+R AE+L
Sbjct: 597 KHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLME 656
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK 689
L+P +V+L N+Y G +R+ ++ ++K+P SWI + N H F+V D
Sbjct: 657 LEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADL 716
Query: 690 THAYSDVIYATVDHL 704
+H S +IY ++ +
Sbjct: 717 SHPSSQMIYTMLETM 731
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 256/550 (46%), Gaps = 78/550 (14%)
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
L+S L+ + + + A+SGS+ LGK H ++KS + + LL
Sbjct: 34 LSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYC 93
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
+C R++ G A LF +MP R+++++ +LISG
Sbjct: 94 KC------------------------------REL-GFARQLFDRMPERNIISFNSLISG 122
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
Y + E+A++LF R + + ++FT + C L G+++HGL + +GL
Sbjct: 123 YTQM-GFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE-----AEL 324
+ L + Y +D A +++ ++ NSLI G + +G EE A++
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS-WNSLISGYVRVGAAEEPLNLLAKM 240
Query: 325 IFYGLRETN------------PISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMI 372
GL T ++ + KG A+ K F+ + ++
Sbjct: 241 HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD------IVVRTALL 294
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY-----IHNGQHSEALKLYVTMRRLS 427
+Y+KNG L EA+KLF +N VT+N+M+SG+ I + SEA KL++ M+R
Sbjct: 295 DMYAKNGSLKEAIKLFSLMPS-KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
++ S STFSV+ +AC++ + + G+ +HA + K FQ++ ++G+AL++ Y+ G D
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
+ F S ++A+WT++I+ + + + LFR + + P T ++SAC+
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCV----VDLLGRSGRLKEAEEFINQMPIEA---D 600
L+ G +I Y + I+ +T V + + +SG + A NQ+ IE D
Sbjct: 474 ALSSGEQIQG-----YAIKSGIDAFTSVKTSSISMYAKSGNMPLA----NQVFIEVQNPD 524
Query: 601 GVIWGALLNA 610
+ A++++
Sbjct: 525 VATYSAMISS 534
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 218/487 (44%), Gaps = 48/487 (9%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
V N+ I +K G+L +A +FD R SWN++ISGY + G +E L L + MH
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 96 RSCVKLNEISFSAVLSSCA---RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
R + L + +VL +C G + G +H K G E +V +ALL +
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
+ EA +F + N V ++ M+SG++Q D +
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI--------------------------- 334
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
++ A LF M+R + P+ T V++ C+ L G+ +H L K+ D
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN--SLIGGLILMGRIEEAELIFYGLR 330
IG AL E Y + +D + + S + ++A+ S+I + ++E A +F L
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQ---DIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 331 ETN--PISY--NLMIKG---YAMSSQIEKSKRLFEKMAPKNLTSLNT-MISVYSKNGELD 382
++ P Y +LM+ +A S E+ + K TS+ T IS+Y+K+G +
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
A ++F + + + T+++M+S +G +EAL ++ +M+ + ++ F + AC
Sbjct: 512 LANQVFIEVQNP-DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVG--TALVDFYSKCGHLADAQR-SFTSIFSPNVA 499
QG L + K ++ N T LVD + G L+DA+ +S F +
Sbjct: 571 CHGGLVTQG-LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 500 AWTALIN 506
W AL++
Sbjct: 630 TWRALLS 636
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 157/356 (44%), Gaps = 34/356 (9%)
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y K EL A +LFD+ ERN +++NS++SGY G + +A++L++ R ++ +
Sbjct: 91 MYCKCRELGFARQLFDRMP-ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKF 149
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T++ C C G+LLH + V++ L+D YSKCG L A F
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS---HAGLLN 550
+ +W +LI+GY G E + L M G+ ++L AC + G +
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 551 DGLEIFHSMQICYRVTPTIEH----YTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGA 606
G+ I CY +E T ++D+ ++G LKEA + + MP + V + A
Sbjct: 270 KGMAIH-----CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNA 323
Query: 607 LLNASWFWKDIEVGERAAEKLFS---------LDPNPISGFVILSNMYAI----LGRWGQ 653
++ S F + E+ + A+ + F L+P+P + V+L A GR
Sbjct: 324 MI--SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIH 381
Query: 654 KTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATIN 709
+ QS E G + IEL M S ED ++ + T+ I+
Sbjct: 382 ALICKNNFQSDEF---IGSALIEL--YALMGSTEDGMQCFASTSKQDIASWTSMID 432
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 291/544 (53%), Gaps = 13/544 (2%)
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
L + +++ Y + D +A + P R+VV+WT+LISG A+ ++ F MRR
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRRE 102
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
V+PN+FT C + A L GK +H L +K G D +G + + YC DDA
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYA- 345
+++++ + E L N+ I + GR EA F R N I++ + +
Sbjct: 163 RKLFDEIP-ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 346 ---MSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNS 402
++ ++ + +++ N +I Y K ++ + +F + G +N+V+W S
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM-GTKNAVSWCS 280
Query: 403 MMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP 462
+++ Y+ N + +A LY+ R+ V+ S S + AC + + G+ +HAH K
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 463 FQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFR 522
+ ++VG+ALVD Y KCG + D++++F + N+ +LI GYA+ G ++ LF
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 523 SMLVQGV--LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
M +G PN TFV++LSACS AG + +G++IF SM+ Y + P EHY+C+VD+LG
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 460
Query: 581 RSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVI 640
R+G ++ A EFI +MPI+ +WGAL NA ++G AAE LF LDP V+
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520
Query: 641 LSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYAT 700
LSN +A GRW + T+R+ L+ + ++K G SWI + N +H F +D++H + I T
Sbjct: 521 LSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTT 580
Query: 701 VDHL 704
+ L
Sbjct: 581 LAKL 584
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 214/511 (41%), Gaps = 55/511 (10%)
Query: 16 RVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMI 75
RV R+ TL DS P P ++ N I +K AR + P R V SW ++I
Sbjct: 26 RVVHARIVKTL--DSPP--PPFLA-NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 76 SGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE 135
SG +Q G + AL M R V N+ +F + A GKQ+H+L +K G
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 136 KFGLVG-SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGK 194
VG SA +C LRD +A LF +
Sbjct: 141 LDVFVGCSAFDMYCK------------TRLRD--------------------DARKLFDE 168
Query: 195 MPVRDVVAWTTLISGYARREDGCER-ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALH 253
+P R++ W IS DG R A++ F RR + PN T + C+ L+
Sbjct: 169 IPERNLETWNAFISNSV--TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 254 AGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGL 313
G +HGL ++ G D D S+ L +FY I ++ ++ MG + ++ SL+
Sbjct: 227 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC-SLVAAY 285
Query: 314 ILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRL----FEKMAPKNL 365
+ E+A +++ R ET+ + ++ A + +E + + + + +
Sbjct: 286 VQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI 345
Query: 366 TSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM-- 423
+ ++ +Y K G ++++ + FD+ E+N VT NS++ GY H GQ AL L+ M
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
R + TF L AC+ + + G ++ + S + + +VD + G
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464
Query: 483 LADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
+ A + P ++ W AL N HG
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 177/419 (42%), Gaps = 71/419 (16%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
KT +AR +FDE+P R + +WN IS GR EA+ R N I+F A
Sbjct: 155 KTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCA 214
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
L++C+ L LG Q+H L+L+SGF+ V + L+ F +C I +E++F E+ N
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKN 274
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
V W +++ YVQ ED E+A L+ R
Sbjct: 275 AVSWCSLVAAYVQ------------------------------NHED--EKASVLYLRSR 302
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
+ V ++F + V+ CA + L G+ +H +K ++ +G AL + Y I+
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSS 348
D+++ ++ M E L NSLIG GYA
Sbjct: 363 DSEQAFDEM-PEKNLVTRNSLIG-------------------------------GYAHQG 390
Query: 349 QIEKSKRLFEKMAPK------NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNS 402
Q++ + LFE+MAP+ N + +++S S+ G ++ +K+FD +
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 403 MMSGYIHN-GQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
S + G+ + Y ++++ + + S + L AC Q G L +L K
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKT------PFQANVYVGTALVDFYSKCGHLA 484
S +L + S S + G+++HA + KT PF AN L++ YSK H
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANY-----LINMYSKLDHPE 59
Query: 485 DAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS 544
A+ + NV +WT+LI+G A +G S +++ F M +GV+PN TF A +
Sbjct: 60 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 119
Query: 545 HAGLLNDGLEIFHSMQI-CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
L G +I H++ + C R+ + D+ ++ +A + +++P E +
Sbjct: 120 SLRLPVTGKQI-HALAVKCGRILDVFVGCS-AFDMYCKTRLRDDARKLFDEIP-ERNLET 176
Query: 604 WGALLNAS 611
W A ++ S
Sbjct: 177 WNAFISNS 184
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 346/668 (51%), Gaps = 86/668 (12%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
+TN + ++G +AEAR +F+++ R +WNTMISGY + ++A L M +
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRD 101
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI---G 155
V ++++ ++S G+ V C GI
Sbjct: 102 V----VTWNTMIS---------------------GY--------------VSCGGIRFLE 122
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
EA +F+E+ + W+ M+SGY + +G A+ LF KMP R+ V+W+ +I+G+ + +
Sbjct: 123 EARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGE 182
Query: 216 GCERALDLFRCMRRSEVLP----------NEFTLDCVIRICARLGALHAGK--VVHGLCI 263
+ A+ LFR M + P NE L + + G+L +G+ +V+
Sbjct: 183 -VDSAVVLFRKMPVKDSSPLCALVAGLIKNE-RLSEAAWVLGQYGSLVSGREDLVYA--- 237
Query: 264 KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM--------GGEA----CLNVA--NSL 309
++ I G Y R ++ A+ +++ + GGE C NV NS+
Sbjct: 238 -----YNTLIVG-----YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 310 IGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN 369
I + +G + A L+F +++ + IS+N MI GY S++E + LF +M ++ S N
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN 347
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
M+S Y+ G ++ A F+KT E+++V+WNS+++ Y N + EA+ L++ M
Sbjct: 348 MMVSGYASVGNVELARHYFEKTP-EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
T + L A T L + + G +H + KT +V V AL+ YS+CG + +++R
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRI 465
Query: 490 FTSI-FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + V W A+I GYA+HG SE++ LF SM G+ P+ TFV++L+AC+HAGL
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGL 525
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+++ F SM Y++ P +EHY+ +V++ G+ +EA I MP E D +WGALL
Sbjct: 526 VDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALL 585
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
+A + ++ + AAE + L+P + +V+L NMYA +G W + + +R ++S ++K
Sbjct: 586 DACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKK 645
Query: 669 DPGCSWIE 676
+ G SW++
Sbjct: 646 ERGSSWVD 653
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 152/382 (39%), Gaps = 85/382 (22%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
+V+S N I K G++ AR +FD+M R SWNTMI GY R ++A AL S M
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSL-LLKSGFEKFGLVGSALLYFCVRCCGI 154
+ HS ++ SG+ G V A Y
Sbjct: 340 --------------------------NRDAHSWNMMVSGYASVGNVELARHY-------- 365
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
FE+ + + V W+ +++ Y + A+DLF +M +
Sbjct: 366 ------FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG--------------- 404
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
E+ P+ TL ++ L L G +H + +K + D +
Sbjct: 405 ---EK--------------PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVH 446
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-- 332
AL Y I +++R+++ M + + N++IGG G EA +F ++
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 333 --NPISYNLMIKGYAMSSQIEKSKRLF------EKMAPKNLTSLNTMISVYSKNGELDEA 384
+ I++ ++ A + ++++K F K+ P+ + +++++V S G+ +EA
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQ-MEHYSSLVNVTSGQGQFEEA 565
Query: 385 VKLFDKTKGERNSVTWNSMMSG 406
+ + E + W +++
Sbjct: 566 MYIITSMPFEPDKTVWGALLDA 587
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPL-RTVSSWNTMISGYSQWGRYDEALALASF 93
P V N I ++ GE+ E+R +FDEM L R V +WN MI GY+ G EAL L
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 94 MHRSCVKLNEISFSAVLSSCARSG 117
M + + + I+F +VL++CA +G
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAG 524
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 197/679 (29%), Positives = 325/679 (47%), Gaps = 45/679 (6%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N I+ G + A ++FD+M R SWN++ + Y+Q G +E+ + S M R +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
+N + S +LS G+ +H L++K GF+ V + LL EA LV
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F++ MP +D+++W +L++ + + A
Sbjct: 319 FKQ-------------------------------MPTKDLISWNSLMASFVNDGRSLD-A 346
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
L L M S N T + C G+++HGL + GL ++ IG AL
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 406
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLM 340
Y + +++RV M + N+LIGG ++A F +R +S N +
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVV-AWNALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYI 464
Query: 341 IKGYAMSS------QIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDK 390
+S+ +E+ K L + S N++I++Y+K G+L + LF+
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
RN +TWN+M++ H+G E LKL MR V + +FS A L ++
Sbjct: 525 LD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 583
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
GQ LH K F+ + ++ A D YSKCG + + + + ++ +W LI+
Sbjct: 584 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 643
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
HG E F ML G+ P TFV++L+ACSH GL++ GL + + + + P IE
Sbjct: 644 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 703
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSL 630
H CV+DLLGRSGRL EAE FI++MP++ + ++W +LL + +++ G +AAE L L
Sbjct: 704 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 763
Query: 631 DPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKT 690
+P S +V+ SNM+A GRW +RK++ ++K CSW++L + + F + D+T
Sbjct: 764 EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 823
Query: 691 HAYSDVIYATVDHLTATIN 709
H + IYA ++ + I
Sbjct: 824 HPQTMEIYAKLEDIKKLIK 842
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/603 (26%), Positives = 266/603 (44%), Gaps = 106/603 (17%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G + ARH+FD MP+R SWNTM+SG + G Y E + M +K + ++
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 109 VLSSCARSGSLFL-GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++++C RSGS+F G QVH + KSG V +A+L+ + + VFEE+ D
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N V W T+L+ GY+ + + E +D+++ M
Sbjct: 124 NVVSW-------------------------------TSLMVGYSDKGEP-EEVIDIYKGM 151
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R V NE ++ VI C L G+ + G +K GL
Sbjct: 152 RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-------------------- 191
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMS 347
E+ L V NSLI L MG ++ A IF + E + IS+N + YA +
Sbjct: 192 ------------ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 348 SQIEKSKRLFEKMA----PKNLTSLNTMISV----------------------------- 374
IE+S R+F M N T+++T++SV
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 375 ------YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
Y+ G EA +F K ++ ++WNS+M+ ++++G+ +AL L +M
Sbjct: 300 NTLLRMYAGAGRSVEANLVF-KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
+ TF+ AC + F++G++LH + + N +G ALV Y K G +++++R
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
+ +V AW ALI GYA +++ F++M V+GV N T V++LSAC G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
L + + H+ + ++ + + G L +++ N + + + W A+L
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAML 537
Query: 609 NAS 611
A+
Sbjct: 538 AAN 540
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/572 (23%), Positives = 249/572 (43%), Gaps = 51/572 (8%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G ++ +R +F+EMP R V SW +++ GYS G +E + + M V NE S S V+
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
SSC LG+Q+ ++KSG E V ++L+ + A +F+++ + + +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
W+ + + Y Q + E + +F MRR
Sbjct: 228 SWNSIAAAYAQNGHI--------------------------------EESFRIFSLMRRF 255
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
N T+ ++ + + G+ +HGL +K G D + L Y +A
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYA 345
V++ M + ++ NSL+ + GR +A +I G + N +++ +
Sbjct: 316 NLVFKQMPTKDLIS-WNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACF 373
Query: 346 MSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
EK + L + N N ++S+Y K GE+ E+ ++ + R+ V WN
Sbjct: 374 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 432
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS-FQQGQLLHAHLSK 460
+++ GY + +AL + TMR V + T + AC ++G+ LHA++
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILL 520
F+++ +V +L+ Y+KCG L+ +Q F + + N+ W A++ A+HG G E + L
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552
Query: 521 FRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
M GV + +F LSA + +L +G ++ H + + + D+
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYS 611
Query: 581 RSGRLKEAEEFINQMPIEADGVI--WGALLNA 610
+ G E E + +P + + W L++A
Sbjct: 612 KCG---EIGEVVKMLPPSVNRSLPSWNILISA 640
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 200/441 (45%), Gaps = 14/441 (3%)
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
Y + + A LF MPVR+ V+W T++SG R E ++ FR M + P+ F
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLE-GMEFFRKMCDLGIKPSSFV 60
Query: 239 LDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM 297
+ ++ C R G++ G VHG K GL D + A+ Y + +++V+E M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 298 GGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKS 353
++ SL+ G G EE I+ G+R N S +L+I +
Sbjct: 121 PDRNVVS-WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 354 KRLFEKMAPKNLTSL----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH 409
+++ ++ L S N++IS+ G +D A +FD+ ER++++WNS+ + Y
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQ 238
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
NG E+ +++ MRR + + +T S L + + G+ +H + K F + V V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
L+ Y+ G +A F + + ++ +W +L+ + G +++ L SM+ G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
N TF + L+AC G I H + + + +V + G+ G + E+
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 590 EFINQMPIEADGVIWGALLNA 610
+ QMP D V W AL+
Sbjct: 418 RVLLQMP-RRDVVAWNALIGG 437
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 170/398 (42%), Gaps = 44/398 (11%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISG 77
EK R+ L+ S + +I N ++ K GE++E+R + +MP R V +WN +I G
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLF-LGKQVHSLLLKSGFEK 136
Y++ D+ALA M V N I+ +VLS+C G L GK +H+ ++ +GFE
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 137 FGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMP 196
V ++L+ +C + ++ +F L + N + W+ ML+ NA G
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA--------ANAHHGHG--- 546
Query: 197 VRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
E L L MR V ++F+ + A+L L G+
Sbjct: 547 ---------------------EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585
Query: 257 VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILM 316
+HGL +K G + D+ I A A+ Y I + ++ + L N LI L
Sbjct: 586 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRS-LPSWNILISALGRH 644
Query: 317 GRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTS 367
G EE F+ + E +++ ++ + ++K ++ +A +
Sbjct: 645 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 704
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMS 405
+I + ++G L EA K + N + W S+++
Sbjct: 705 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 742
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 12/242 (4%)
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y+K G + A LFD RN V+WN+MMSG + G + E ++ + M L + S
Sbjct: 1 MYTKFGRVKPARHLFDIMP-VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59
Query: 434 TFSVLFRACTSLCS-FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
+ L AC S F++G +H ++K+ ++VYV TA++ Y G ++ +++ F
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
+ NV +WT+L+ GY+ G E I +++ M +GV N + ++S+C GLL D
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKD- 175
Query: 553 LEIFHSMQICYRVTPTIEHYTCV----VDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
E I V +E V + +LG G + A +QM E D + W ++
Sbjct: 176 -ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIA 233
Query: 609 NA 610
A
Sbjct: 234 AA 235
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 197/679 (29%), Positives = 325/679 (47%), Gaps = 45/679 (6%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N I+ G + A ++FD+M R SWN++ + Y+Q G +E+ + S M R +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
+N + S +LS G+ +H L++K GF+ V + LL EA LV
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F++ MP +D+++W +L++ + + A
Sbjct: 302 FKQ-------------------------------MPTKDLISWNSLMASFVNDGRSLD-A 329
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
L L M S N T + C G+++HGL + GL ++ IG AL
Sbjct: 330 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 389
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLM 340
Y + +++RV M + N+LIGG ++A F +R +S N +
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVV-AWNALIGGYAEDEDPDKALAAFQTMR-VEGVSSNYI 447
Query: 341 IKGYAMSS------QIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDK 390
+S+ +E+ K L + S N++I++Y+K G+L + LF+
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
RN +TWN+M++ H+G E LKL MR V + +FS A L ++
Sbjct: 508 LD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 566
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
GQ LH K F+ + ++ A D YSKCG + + + + ++ +W LI+
Sbjct: 567 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 626
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
HG E F ML G+ P TFV++L+ACSH GL++ GL + + + + P IE
Sbjct: 627 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 686
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSL 630
H CV+DLLGRSGRL EAE FI++MP++ + ++W +LL + +++ G +AAE L L
Sbjct: 687 HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 746
Query: 631 DPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKT 690
+P S +V+ SNM+A GRW +RK++ ++K CSW++L + + F + D+T
Sbjct: 747 EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 806
Query: 691 HAYSDVIYATVDHLTATIN 709
H + IYA ++ + I
Sbjct: 807 HPQTMEIYAKLEDIKKLIK 825
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 257/589 (43%), Gaps = 106/589 (17%)
Query: 63 MPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFL- 121
MP+R SWNTM+SG + G Y E + M +K + ++++++C RSGS+F
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
G QVH + KSG V +A+L+ + + VFEE+ D N V W
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSW--------- 111
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
T+L+ GY+ + + E +D+++ MR V NE ++
Sbjct: 112 ----------------------TSLMVGYSDKGE-PEEVIDIYKGMRGEGVGCNENSMSL 148
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
VI C L G+ + G +K GL E+
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGL--------------------------------ES 176
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM- 360
L V NSLI L MG ++ A IF + E + IS+N + YA + IE+S R+F M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 361 ---APKNLTSLNTMISV-----------------------------------YSKNGELD 382
N T+++T++SV Y+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
EA +F K ++ ++WNS+M+ ++++G+ +AL L +M + TF+ AC
Sbjct: 297 EANLVF-KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
+ F++G++LH + + N +G ALV Y K G +++++R + +V AW
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
ALI GYA +++ F++M V+GV N T V++LSAC G L + + H+ +
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNAS 611
++ + + G L +++ N + + + W A+L A+
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAAN 523
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/572 (23%), Positives = 249/572 (43%), Gaps = 51/572 (8%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G ++ +R +F+EMP R V SW +++ GYS G +E + + M V NE S S V+
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
SSC LG+Q+ ++KSG E V ++L+ + A +F+++ + + +
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
W+ + + Y Q + E + +F MRR
Sbjct: 211 SWNSIAAAYAQNGHI--------------------------------EESFRIFSLMRRF 238
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
N T+ ++ + + G+ +HGL +K G D + L Y +A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYA 345
V++ M + ++ NSL+ + GR +A +I G + N +++ +
Sbjct: 299 NLVFKQMPTKDLIS-WNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACF 356
Query: 346 MSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
EK + L + N N ++S+Y K GE+ E+ ++ + R+ V WN
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 415
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS-FQQGQLLHAHLSK 460
+++ GY + +AL + TMR V + T + AC ++G+ LHA++
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILL 520
F+++ +V +L+ Y+KCG L+ +Q F + + N+ W A++ A+HG G E + L
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535
Query: 521 FRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
M GV + +F LSA + +L +G ++ H + + + D+
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYS 594
Query: 581 RSGRLKEAEEFINQMPIEADGVI--WGALLNA 610
+ G E E + +P + + W L++A
Sbjct: 595 KCG---EIGEVVKMLPPSVNRSLPSWNILISA 623
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 170/398 (42%), Gaps = 44/398 (11%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISG 77
EK R+ L+ S + +I N ++ K GE++E+R + +MP R V +WN +I G
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLF-LGKQVHSLLLKSGFEK 136
Y++ D+ALA M V N I+ +VLS+C G L GK +H+ ++ +GFE
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 137 FGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMP 196
V ++L+ +C + ++ +F L + N + W+ ML+ NA G
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA--------ANAHHGHG--- 529
Query: 197 VRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
E L L MR V ++F+ + A+L L G+
Sbjct: 530 ---------------------EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 257 VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILM 316
+HGL +K G + D+ I A A+ Y I + ++ + L N LI L
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRS-LPSWNILISALGRH 627
Query: 317 GRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTS 367
G EE F+ + E +++ ++ + ++K ++ +A +
Sbjct: 628 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 687
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMS 405
+I + ++G L EA K + N + W S+++
Sbjct: 688 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 344/727 (47%), Gaps = 97/727 (13%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRT--VSSWNTMISGYSQWGRYDEALALASF 93
H+IST IS+ G L+ A + P V WN++I Y G ++ L L
Sbjct: 64 HLISTYISV------GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
MH + +F V +C S+ G+ H+L L +GF VG+AL+ RC
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
+ +A VF+E M V DVV+W ++I YA+
Sbjct: 178 LSDARKVFDE-------------------------------MSVWDVVSWNSIIESYAKL 206
Query: 214 EDGCERALDLF-RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
+ AL++F R P+ TL V+ CA LG GK +H + + +
Sbjct: 207 GKP-KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE- 331
+G L + Y +D+A V+ +M + ++ N+++ G +GR E+A +F ++E
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 332 ---TNPISYNLMIKGYA---------------MSSQIE---------------------- 351
+ ++++ I GYA +SS I+
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 352 KSKRLFEKMAPKNLTS---------LNTMISVYSKNGELDEAVKLFDK-TKGERNSVTWN 401
K + P +L +N +I +Y+K ++D A +FD + ER+ VTW
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV--LFRACTSLCSFQQGQLLHAHLS 459
M+ GY +G ++AL+L M + F++ AC SL + + G+ +HA+
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 460 KTPFQA-NVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
+ A ++V L+D Y+KCG ++DA+ F ++ + N WT+L+ GY HG G E++
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
+F M G + T + +L ACSH+G+++ G+E F+ M+ + V+P EHY C+VDL
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGF 638
LGR+GRL A I +MP+E V+W A L+ +E+GE AAEK+ L N +
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY 684
Query: 639 VILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
+LSN+YA GRW T IR ++ ++K PGCSW+E F V DKTH ++ IY
Sbjct: 685 TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Query: 699 AT-VDHL 704
+DH+
Sbjct: 745 QVLLDHM 751
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/688 (27%), Positives = 330/688 (47%), Gaps = 100/688 (14%)
Query: 26 LLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYD 85
++R P+ S ++A + L AR +FDE+P +WNT+I Y+ D
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--D 110
Query: 86 EALALASFMH---RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGS 142
L++ +F+ S N+ +F ++ + A SL LG+ +H + +KS V +
Sbjct: 111 PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVAN 170
Query: 143 ALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA 202
+L++ C + A VF +++ + V W+ M++G+VQ+ A++LF KM DV A
Sbjct: 171 SLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA 230
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
+ T+ V+ CA++ L G+ V
Sbjct: 231 --------------------------------SHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 263 IKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA 322
++ ++ + ++ A+ + Y +I+DAKR++++M
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM------------------------- 293
Query: 323 ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELD 382
E + +++ M+ GYA+S E ++ + M K++ + N +IS Y +NG+ +
Sbjct: 294 -------EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
EA+ +F + + ++N +KL ++ T AC
Sbjct: 347 EALIVFHELQLQKN--------------------MKL-----------NQITLVSTLSAC 375
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
+ + + G+ +H+++ K + N +V +AL+ YSKCG L ++ F S+ +V W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
A+I G A HG G+E++ +F M V PN TF + ACSH GL+++ +FH M+
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGER 622
Y + P +HY C+VD+LGRSG L++A +FI MPI +WGALL A ++ + E
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 623 AAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIH 682
A +L L+P V+LSN+YA LG+W + +RK ++ L+K+PGCS IE++ IH
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 683 MFSVEDKTHAYSDVIYATVDHLTATINS 710
F D H S+ +Y + + + S
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKS 643
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 197/683 (28%), Positives = 341/683 (49%), Gaps = 52/683 (7%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR---- 96
N +A + G L +A ++F +M R + SWN ++ GY++ G +DEA+ L HR
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL---YHRMLWV 189
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
VK + +F VL +C L GK+VH +++ G+E V +AL+ V+C +
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A L LF +MP RD+++W +ISGY E+G
Sbjct: 250 ARL-------------------------------LFDRMPRRDIISWNAMISGYF--ENG 276
Query: 217 -CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
C L+LF MR V P+ TL VI C LG G+ +H I G D S+
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG---GLILMGRIEEAELIFYGLRET 332
+L + Y + + +A++++ M + ++ + G + I+ ++ +
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL----NTMISVYSKNGELDEAVKLF 388
+ I+ ++ A ++ L + L S N +I++YSK +D+A+ +F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
+N ++W S+++G N + EAL +++ ++++ + T + AC + +
Sbjct: 457 HNIP-RKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
G+ +HAH+ +T + ++ AL+D Y +CG + A F S +V +W L+ GY
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGY 573
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
+ G GS + LF M+ V P+ TF+++L CS + ++ GL F M+ Y VTP
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPN 632
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLF 628
++HY CVVDLLGR+G L+EA +FI +MP+ D +WGALLNA I++GE +A+ +F
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIF 692
Query: 629 SLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVED 688
LD + +++L N+YA G+W + +R+ ++ L D GCSW+E+ +H F +D
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Query: 689 KTHAYSDVIYATVDHLTATINSI 711
K H + I ++ ++ +
Sbjct: 753 KYHPQTKEINTVLEGFYEKMSEV 775
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 239/541 (44%), Gaps = 53/541 (9%)
Query: 82 GRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-V 140
G+ +EA+ L + M V ++E F A++ C + G +V+S+ L S G+ +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL-SSMSSLGVEL 131
Query: 141 GSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV 200
G+A L VR + +A VF ++ + N W++++ GY ++ AM L+ +M
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM----- 186
Query: 201 VAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
W V P+ +T CV+R C + L GK VH
Sbjct: 187 -LWV-------------------------GGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
++ G + D + AL Y + A+ +++ M ++ N++I G G
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS-WNAMISGYFENGMCH 279
Query: 321 EAELIFYGLRETNPISYNLMIKGYAMSS-QIEKSKRLFEKMAPKNLTS--------LNTM 371
E +F+ +R + + +LM +S+ ++ +RL + +T+ N++
Sbjct: 280 EGLELFFAMRGLS-VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 372 ISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
+Y G EA KLF + + ++ V+W +M+SGY +N +A+ Y M + SV
Sbjct: 339 TQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
T + + AC +L G LH K + V V L++ YSKC + A F
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 492 SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
+I NV +WT++I G + E+++ R M + + PNA T A L+AC+ G L
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMC 516
Query: 552 GLEIFHSMQICYRVTPTIEHY--TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
G EI H+ + R ++ + ++D+ R GR+ A N + D W LL
Sbjct: 517 GKEI-HAHVL--RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLT 571
Query: 610 A 610
Sbjct: 572 G 572
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 52/390 (13%)
Query: 34 HPHVIST----NISIAHRA-----KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRY 84
H +VI+T +IS+ + G EA +F M + + SW TMISGY
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379
Query: 85 DEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSAL 144
D+A+ M + VK +EI+ +AVLS+CA G L G ++H L +K+ + +V + L
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 145 LYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWT 204
+ +C I +A +D+F +P ++V++WT
Sbjct: 440 INMYSKCKCIDKA-------------------------------LDIFHNIPRKNVISWT 468
Query: 205 TLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIK 264
++I+G R + C AL R M+ + + PN TL + CAR+GAL GK +H ++
Sbjct: 469 SIIAGL-RLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Query: 265 DGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGR----IE 320
G+ D+ + AL + Y ++ A + S + + N L+ G G+ +E
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTGYSERGQGSMVVE 584
Query: 321 EAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM----APKNLTSLNTMISVYS 376
+ + + I++ ++ G + S + + F KM NL ++ +
Sbjct: 585 LFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLG 644
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+ GEL EA K K + W ++++
Sbjct: 645 RAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 176/391 (45%), Gaps = 31/391 (7%)
Query: 312 GLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS 367
GL G++EEA + ++E + + +++ E+ +++ +A +++S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSMSS 126
Query: 368 L-----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
L N ++++ + G L +A +F K ERN +WN ++ GY G EA+ LY
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKM-SERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 423 MRRLS-VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
M + V TF + R C + +G+ +H H+ + ++ ++ V AL+ Y KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
+ A+ F + ++ +W A+I+GY +G+ E + LF +M V P+ T +++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
AC G G +I H+ I I + + +G +EAE+ ++M D
Sbjct: 306 ACELLGDRRLGRDI-HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDI 363
Query: 602 VIWGALLNASW--FWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWG-----QK 654
V W +++ F D + S+ P+ I+ +LS A LG K
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC-ATLGDLDTGVELHK 422
Query: 655 TTIRKRLQSLELRKDPGCSWIELNNNIHMFS 685
I+ RL S I NN I+M+S
Sbjct: 423 LAIKARLISYV---------IVANNLINMYS 444
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 295/599 (49%), Gaps = 45/599 (7%)
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A VF+ + N W+ +L Y + ++ F K+P RD V W LI GY+
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
MR TL ++++ + G + GK +HG IK G + +G
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS 336
L Y + I DAK+V+ + + + NSL+GGL+ G IE+A +F G+ E + +S
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTV-MYNSLMGGLLACGMIEDALQLFRGM-EKDSVS 237
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLT-----------------SLN---------- 369
+ MIKG A + +++ F +M + L ++N
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 370 ------------TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEAL 417
+I +Y K L A +FD+ K ++N V+W +M+ GY G+ EA+
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 418 KLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFY 477
K+++ M+R +D T AC ++ S ++G H + V V +LV Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 478 SKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFV 537
KCG + D+ R F + + +WTA+++ YA G E+I LF M+ G+ P+ T
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 538 AILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPI 597
++SACS AGL+ G F M Y + P+I HY+C++DL RSGRL+EA FIN MP
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 598 EADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTI 657
D + W LL+A ++E+G+ AAE L LDP+ +G+ +LS++YA G+W +
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 658 RKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSIIPFNY 716
R+ ++ ++K+PG SWI+ +H FS +D++ Y D IYA ++ L N II Y
Sbjct: 597 RRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELN---NKIIDNGY 652
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 244/485 (50%), Gaps = 17/485 (3%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF 93
P++ S N + +K G ++E F+++P R +WN +I GYS G A+ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 94 MHRS-CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
M R L ++ +L + +G + LGKQ+H ++K GFE + LVGS LLY
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
I +A+ VF L D N V+++ ++ G + M+ +A+ LF M +D V+W +I G A+
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQ 247
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
E A++ FR M+ + +++ V+ C LGA++ GK +H I+
Sbjct: 248 NGLAKE-AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET 332
+G AL + YC + AK V++ M + ++ +++ G GR EEA IF ++ +
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS-WTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 333 --NPISYNL--MIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEA 384
+P Y L I A S +E+ + K L T N+++++Y K G++D++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 385 VKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
+LF++ R++V+W +M+S Y G+ E ++L+ M + + T + + AC+
Sbjct: 426 TRLFNEMN-VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 445 LCSFQQGQLLHAHLSKTPFQANVYVG--TALVDFYSKCGHLADAQRSFTSI-FSPNVAAW 501
++GQ + L + + +G + ++D +S+ G L +A R + F P+ W
Sbjct: 485 AGLVEKGQ-RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 502 TALIN 506
T L++
Sbjct: 544 TTLLS 548
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 34/303 (11%)
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERN 396
YN ++ YA+ ++R+F+++ NL S N ++ YSK G + E F+K +R+
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP-DRD 102
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVT-MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
VTWN ++ GY +G A+K Y T MR S + +R T + + +S G+ +H
Sbjct: 103 GVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIH 162
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNV----------------- 498
+ K F++ + VG+ L+ Y+ G ++DA++ F + N
Sbjct: 163 GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIE 222
Query: 499 -------------AAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
+W A+I G A +GL E+I FR M VQG+ + F ++L AC
Sbjct: 223 DALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG 282
Query: 546 AGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWG 605
G +N+G +I H+ I I + ++D+ + L A+ ++M + + V W
Sbjct: 283 LGAINEGKQI-HACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWT 340
Query: 606 ALL 608
A++
Sbjct: 341 AMV 343
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 9/250 (3%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISG 77
E ++ ++R + H +V S I + + K L A+ +FD M + V SW M+ G
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC--LHYAKTVFDRMKQKNVVSWTAMVVG 345
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
Y Q GR +EA+ + M RS + + + +S+CA SL G Q H + SG +
Sbjct: 346 YGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
V ++L+ +C I ++ +F E+ + V W+ M+S Y Q + LF KM
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 198 R----DVVAWTTLISGYARREDGCERALDLFRCMRRS-EVLPNEFTLDCVIRICARLGAL 252
D V T +IS R E+ F+ M ++P+ C+I + +R G L
Sbjct: 466 HGLKPDGVTLTGVISA-CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 253 -HAGKVVHGL 261
A + ++G+
Sbjct: 525 EEAMRFINGM 534
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/655 (29%), Positives = 329/655 (50%), Gaps = 40/655 (6%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L A +FDEMP R +WN ++ + G +++A+ L M S K + + +L
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
C+ G+Q+H +L+ G E + ++L+ R + + VF ++D N W
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPV----RDVVAWTTLISGYARREDGCER-ALDLFRCM 227
+ +LS Y + + +A+ L +M + D+V W +L+SGYA + G + A+ + + M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASK--GLSKDAIAVLKRM 216
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ + + P+ ++ +++ A G L GK +HG +++ L +D + L + Y +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKG 343
A+ V++ M + + NSL+ GL +++AE + + + + I++N + G
Sbjct: 277 PYARMVFDMMDAKNIV-AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
YA + EK+ + KM K + N V+W ++
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAP----------------------------NVVSWTAI 367
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
SG NG ALK+++ M+ V + +T S L + L G+ +H +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 464 QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
+ YV TALVD Y K G L A F I + ++A+W ++ GYA G G E I F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSG 583
ML G+ P+A TF ++LS C ++GL+ +G + F M+ Y + PTIEH +C+VDLLGRSG
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSN 643
L EA +FI M ++ D IWGA L++ +D+E+ E A ++L L+P+ + ++++ N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 644 MYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
+Y+ L RW IR +++ +R SWI+++ +H+F E KTH IY
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 176/428 (41%), Gaps = 113/428 (26%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYD--------------- 85
N I ++ G+L +R +F+ M R +SSWN+++S Y++ G D
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 86 --------------------EALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
+A+A+ M + +K + S S++L + A G L LGK +
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW------------- 172
H +L++ V + L+ ++ + A +VF+ + N V W
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 173 ----SLML------------------SGYVQRDMMGNAMDLFGKMPVR----DVVAWTTL 206
+LM+ SGY A+D+ GKM + +VV+WT +
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
SG ++ + AL +F M+ V PN T+ +++I L LH+GK VHG C++
Sbjct: 368 FSGCSKNGN-FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF 326
L D + AL + Y G++ G ++ A IF
Sbjct: 427 LICDAYVATALVDMY-----------------GKS---------------GDLQSAIEIF 454
Query: 327 YGLRETNPISYNLMIKGYAMSSQIEKSKRLFE-----KMAPKNLTSLNTMISVYSKNGEL 381
+G++ + S+N M+ GYAM + E+ F M P +T +++SV +G +
Sbjct: 455 WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT-FTSVLSVCKNSGLV 513
Query: 382 DEAVKLFD 389
E K FD
Sbjct: 514 QEGWKYFD 521
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Query: 375 YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRST 434
Y + L A KLFD+ +R+ + WN ++ + +G +A++L+ M+ ST
Sbjct: 33 YGRCVSLGFANKLFDEMP-KRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDST 91
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
L + C++ F +G+ +H ++ + ++NV + +L+ YS+ G L +++ F S+
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLE 554
N+++W ++++ Y G ++I L M + G+ P+ T+ ++LS + GL D +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 555 IFHSMQICYRVTPTIEHYTCVVDLLGRSGRLK 586
+ MQI + P+ + ++ + G LK
Sbjct: 212 VLKRMQIA-GLKPSTSSISSLLQAVAEPGHLK 242
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
K+G+L A +F + ++++SWN M+ GY+ +GR +E +A S M + ++ + I+F+
Sbjct: 442 GKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFT 501
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGS 142
+VLS C SG L++ G++ F L+ S
Sbjct: 502 SVLSVCKNSG-----------LVQEGWKYFDLMRS 525
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 303/574 (52%), Gaps = 47/574 (8%)
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+H S+++S Y ++ A+ LF + V+AW ++I + + +AL F M
Sbjct: 38 SHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD-QSLFSKALASFVEM 96
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC----- 282
R S P+ V++ C + L G+ VHG ++ G+D D G AL Y
Sbjct: 97 RASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGM 156
Query: 283 ---------------------DRD----------AIDDAKRVYESMGGEACLNVANSLIG 311
D D ID +RV+E M + ++ N++I
Sbjct: 157 GSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSY-NTIIA 215
Query: 312 GLILMGRIEEAELIF--YGLRETNPISYNL--MIKGYAMSSQIEKSKRLFEKMAPKNLTS 367
G G E+A + G + P S+ L ++ ++ + K K + + K + S
Sbjct: 216 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS 275
Query: 368 L----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
++++ +Y+K+ ++++ ++F + R+ ++WNS+++GY+ NG+++EAL+L+ M
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYC-RDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHL 483
V FS + AC L + G+ LH ++ + F +N+++ +ALVD YSKCG++
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
A++ F + + +WTA+I G+A HG G E++ LF M QGV PN FVA+L+AC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
SH GL+++ F+SM Y + +EHY V DLLGR+G+L+EA FI++M +E G +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 604 WGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQS 663
W LL++ K++E+ E+ AEK+F++D + +V++ NMYA GRW + +R R++
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 664 LELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVI 697
LRK P CSWIE+ N H F D++H D I
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 216/467 (46%), Gaps = 18/467 (3%)
Query: 60 FDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSL 119
F + V +W ++I ++ + +ALA M S + F +VL SC L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 120 FLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE---AELVFEEL--RDGNHVLWSL 174
G+ VH +++ G + G+AL+ + G+G VF+E+ R N +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLP 234
+ + + +F MP +DVV++ T+I+GYA+ E AL + R M +++ P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ-SGMYEDALRMVREMGTTDLKP 240
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
+ FTL V+ I + + GK +HG I+ G+D D IG +L + Y I+D++RV+
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 295 ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMIKGYAMSSQI 350
+ ++ NSL+ G + GR EA +F + + P ++++ +I A + +
Sbjct: 301 SRLYCRDGIS-WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 351 EKSKRLFEKMA----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
K+L + N+ + ++ +YSK G + A K+FD+ + V+W +++ G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMG 418
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQA 465
+ +G EA+ L+ M+R V ++ F + AC+ + + ++K
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 466 NVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
+ A+ D + G L +A + + P + W+ L++ + H
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 162/365 (44%), Gaps = 56/365 (15%)
Query: 57 RHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARS 116
R +F+ MP + V S+NT+I+GY+Q G Y++AL + M + +K + + S+VL +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 117 GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL--RDGNHVLWSL 174
+ GK++H +++ G + +GS+L+ + I ++E VF L RDG + W+
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG--ISWNS 313
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLP 234
+++GYVQ A L LFR M ++V P
Sbjct: 314 LVAGYVQNGRYNEA--------------------------------LRLFRQMVTAKVKP 341
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
VI CA L LH GK +HG ++ G + I AL + Y I A++++
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 295 ESMGGEACLNVAN-----SLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYA 345
+ M NV + ++I G L G EA +F ++ + N +++ ++ +
Sbjct: 402 DRM------NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
Query: 346 MSSQIEKSKRLFEKMAP-----KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
++++ F M + L + + + G+L+EA K E W
Sbjct: 456 HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVW 515
Query: 401 NSMMS 405
++++S
Sbjct: 516 STLLS 520
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 36/322 (11%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK+ + ++ +F + R SWN++++GY Q GRY+EAL L M + VK ++FS
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+V+ +CA +L LGKQ+H +L+ GF + SAL+ +C I A +F+
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD----- 402
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+M V D V+WT +I G+A G E A+ LF M
Sbjct: 403 --------------------------RMNVLDEVSWTAIIMGHALHGHGHE-AVSLFEEM 435
Query: 228 RRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
+R V PN+ V+ C+ +G + A + + GL+ + A+A+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELI---FYGLRETNPISYNLMIKG 343
+++A M E +V ++L+ + +E AE + + + N +Y LM
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 344 YAMSSQIEKSKRLFEKMAPKNL 365
YA + + ++ +L +M K L
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGL 577
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 201/724 (27%), Positives = 340/724 (46%), Gaps = 106/724 (14%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V S N + R K G+L EA +FD MP R V SWN MIS + G ++AL + M
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
+ + ++VLS+C++ G + H + +K+G +K VG+ALL +C I +
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 157 AEL-VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYA 211
+ VFE L N V ++ ++ G + + + A+ +F M + D V + ++S A
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
RE GC+ SE+ NE GK +H L ++ G D
Sbjct: 252 PRE-GCDSL---------SEIYGNEL-----------------GKQIHCLALRLGFGGDL 284
Query: 272 SIGGALAEFYCDRDAIDDAKRVYESM---------------------------------- 297
+ +L E Y ++ A+ ++ M
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS 344
Query: 298 GGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLF 357
G + S++G G +E IF + + + ++N M+ GY+ E++ F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 358 EKMAPKNLTSLNT---------------------------------------MISVYSKN 378
+M +NL T +I+VYS+
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV-DHSRSTFSV 437
+++ + +FD E + WNSM+SG+ HN ++AL L+ M + +V + ++F+
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
+ +C+ LCS G+ H + K+ + ++ +V TAL D Y KCG + A++ F ++ N
Sbjct: 525 VLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKN 584
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
W +I+GY ++G G E++ L+R M+ G P+ TFV++L+ACSH+GL+ GLEI
Sbjct: 585 TVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILS 644
Query: 558 SMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDI 617
SMQ + + P ++HY C+VD LGR+GRL++AE+ P ++ V+W LL++ D+
Sbjct: 645 SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDV 704
Query: 618 EVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIEL 677
+ R AEKL LDP + +V+LSN Y+ L +W ++ + + K PG SW
Sbjct: 705 SLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTY 764
Query: 678 NNNI 681
N++
Sbjct: 765 GNDL 768
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 132/574 (22%), Positives = 253/574 (44%), Gaps = 89/574 (15%)
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
GK +H +++ G + + + LL + C A VF+E+ + W+ L+ +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
+G A ++F MP RDVV+W +IS R+ E+AL +++ M LP+ FTL
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFE-EKALVVYKRMVCDGFLPSRFTLAS 143
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD-AKRVYESMGGE 300
V+ C+++ G HG+ +K GLD + +G AL Y I D RV+ES+
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRE----------TNPISY------------- 337
++ ++IGGL ++ EA +F + E +N +S
Sbjct: 204 NEVSYT-AVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 338 -------------------------NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMI 372
N +++ YA + + ++ +F +M N+ S N MI
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 373 SVYSKNGELDEAVKLFDKTKG---ERNSVT------------------------------ 399
+ + D++V+ + + + N VT
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS 382
Query: 400 -WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
WN+M+SGY + + EA+ + M+ ++ ++T SV+ +C L + G+ +H +
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP-NVAAWTALINGYAYHGLGSES 517
+T N ++ + L+ YS+C + ++ F + ++A W ++I+G+ ++ L +++
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 502
Query: 518 ILLFRSMLVQGVL-PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
++LFR M VL PN +F +LS+CS L G + FH + + T +
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVETALT 561
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
D+ + G + A +F + + + + VIW +++
Sbjct: 562 DMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHG 594
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 222/481 (46%), Gaps = 53/481 (11%)
Query: 16 RVEKFRLFTTLLRDS--EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNT 73
R +K F T +RDS +P+ IS + ++G++ R +F +P +VS+WN
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISV---LGACFRSGDVETGRRIFSSIPQPSVSAWNA 386
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
M+SGYS + Y+EA++ M +K ++ + S +LSSCAR L GKQ+H +++++
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Query: 134 FEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFG 193
K + S L+ C + +E +F++ N +D
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCI---------------------NELD--- 482
Query: 194 KMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVL-PNEFTLDCVIRICARLGAL 252
+ W ++ISG+ R +AL LFR M ++ VL PNE + V+ C+RL +L
Sbjct: 483 ------IACWNSMISGF-RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 253 HAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGG 312
G+ HGL +K G D+ + AL + YC ID A++ ++++ + + + N +I G
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV-IWNEMIHG 594
Query: 313 LILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKMA-----PK 363
GR +EA ++ + + + I++ ++ + S +E + M
Sbjct: 595 YGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEP 654
Query: 364 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
L ++ + G L++A KL + T + +SV W ++S +G S A ++ +
Sbjct: 655 ELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQ-----QGQLLHAHLSKTPFQANVYVGTALVDFYS 478
RL S + + +L +SL + QG + + KTP Q+ G L +
Sbjct: 715 MRLD-PQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDLDSGFR 773
Query: 479 K 479
K
Sbjct: 774 K 774
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 288/576 (50%), Gaps = 79/576 (13%)
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
Q+H++ +KSG + L + +L FC S RD
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCA--------------------------TSDLHHRD 74
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARR-EDGCERALDLFRCMRRSE-VLPNEFTLDC 241
+ A +F +MP R+ +W T+I G++ ED A+ LF M E V PN FT
Sbjct: 75 L-DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
V++ CA+ G + GK +HGL +K G D + L Y
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMY-------------------- 173
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA 361
++ G +++A ++FY N I ++++ ++ KR E
Sbjct: 174 ------------VMCGFMKDARVLFY----KNIIEKDMVV-------MTDRRKRDGE--- 207
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
+ N MI Y + G+ A LFDK + +R+ V+WN+M+SGY NG +A++++
Sbjct: 208 ---IVLWNVMIDGYMRLGDCKAARMLFDKMR-QRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 422 TMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
M++ + + T + A + L S + G+ LH + + + + +G+AL+D YSKCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
+ A F + NV W+A+ING+A HG ++I F M GV P+ ++ +L+
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
ACSH GL+ +G F M + P IEHY C+VDLLGRSG L EAEEFI MPI+ D
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRL 661
VIW ALL A ++E+G+R A L + P+ +V LSNMYA G W + + +R R+
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 662 QSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVI 697
+ ++RKDPGCS I+++ +H F VED +H + I
Sbjct: 504 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEI 539
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 189/379 (49%), Gaps = 28/379 (7%)
Query: 52 ELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF---MHRSCVKLNEISFSA 108
+L A +F++MP R SWNT+I G+S+ +A+ F M V+ N +F +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVF------- 161
VL +CA++G + GKQ+H L LK GF V S L+ V C + +A ++F
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 162 -------EELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
RDG VLW++M+ GY++ A LF KM R VV+W T+ISGY+
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL-N 252
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
+ A+++FR M++ ++ PN TL V+ +RLG+L G+ +H G+ D+ +G
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-- 332
AL + Y I+ A V+E + E + + ++I G + G+ +A F +R+
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWS-AMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 333 --NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN-----LTSLNTMISVYSKNGELDEAV 385
+ ++Y ++ + +E+ +R F +M + + M+ + ++G LDEA
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 386 KLFDKTKGERNSVTWNSMM 404
+ + + V W +++
Sbjct: 432 EFILNMPIKPDDVIWKALL 450
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%)
Query: 25 TLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRY 84
++ D ++ N+ I + G+ AR +FD+M R+V SWNTMISGYS G +
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 85 DEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSAL 144
+A+ + M + ++ N ++ +VL + +R GSL LG+ +H SG ++GSAL
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 145 LYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
+ +C I +A VFE L N + WS M++G+ G+A+D F KM
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 366
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/679 (29%), Positives = 324/679 (47%), Gaps = 81/679 (11%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N I + + L++A +F P++ SWN +ISGY + G EA L M +K
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
NE + +VL C L G+Q+H +K+GF+ V + LL +C I EAE +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE-R 219
FE + ++ V WT++++GY+ ++G +
Sbjct: 183 FETMEGE------------------------------KNNVTWTSMLTGYS--QNGFAFK 210
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
A++ FR +RR N++T V+ CA + A G VH +K G + + AL +
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPI 335
Y ++ A+ + E M + ++ NS+I G + G I EA +F + E +
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 336 SYNLMIKGYAMSS---QIEKSKRLF---EKMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
+ ++ +A+S +I S A L + N ++ +Y+K G +D A+K+F+
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN-NALVDMYAKRGIMDSALKVFE 388
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
E++ ++W ++++G HNG + EALKL+ MR + + + + A L +
Sbjct: 389 GMI-EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLE 447
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
GQ +H + K+ F +++ V +LV Y+KCG L DA F S+ ++ WT LI GYA
Sbjct: 448 FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
+G LL D F SM+ Y +TP
Sbjct: 508 KNG-----------------------------------LLEDAQRYFDSMRTVYGITPGP 532
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
EHY C++DL GRSG + E+ ++QM +E D +W A+L AS +IE GERAA+ L
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLME 592
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK 689
L+PN +V LSNMY+ GR + +R+ ++S + K+PGCSW+E +H F ED+
Sbjct: 593 LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDR 652
Query: 690 THAYSDVIYATVDHLTATI 708
H IY+ VD + I
Sbjct: 653 RHPRMVEIYSKVDEMMLLI 671
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 309/556 (55%), Gaps = 17/556 (3%)
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR-DVVAWTTLISGYAR 212
I EA +F+ L + + V W+ +++GY++ M A +LF ++ R +VV WT ++SGY R
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
+ A LF+ M V+ +D G +G++ L + D + N
Sbjct: 122 SKQ-LSIAEMLFQEMPERNVVSWNTMID---------GYAQSGRIDKALELFDEMPERNI 171
Query: 273 IG-GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE 331
+ ++ + R ID+A ++E M ++ +++ GL G+++EA +F + E
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWT-AMVDGLAKNGKVDEARRLFDCMPE 230
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKT 391
N IS+N MI GYA +++I+++ +LF+ M ++ S NTMI+ + +N E+++A LFD+
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTM-RRLSVDHSRSTFSVLFRACTSLCSFQQ 450
E+N ++W +M++GY+ N ++ EAL ++ M R SV + T+ + AC+ L +
Sbjct: 291 P-EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS--IFSPNVAAWTALINGY 508
GQ +H +SK+ Q N V +AL++ YSK G L A++ F + + ++ +W ++I Y
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
A+HG G E+I ++ M G P+A T++ +L ACSHAGL+ G+E F + +
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLF 628
EHYTC+VDL GR+GRLK+ FIN +GA+L+A ++ + + +K+
Sbjct: 470 EEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL 529
Query: 629 SLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVED 688
+ +V++SN+YA G+ + +R +++ L+K PGCSW+++ H+F V D
Sbjct: 530 ETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGD 589
Query: 689 KTHAYSDVIYATVDHL 704
K+H + + + + L
Sbjct: 590 KSHPQFEALDSILSDL 605
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 225/522 (43%), Gaps = 98/522 (18%)
Query: 9 PVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTV 68
P + + V+ F L ++ S P V I K G++AEAR +FD +P R V
Sbjct: 20 PSSDNDRSVQLFNLVRSIY--SSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV 77
Query: 69 SSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSL 128
+W +I+GY + G EA L R + N ++++A++S RS L +
Sbjct: 78 VTWTHVITGYIKLGDMREAREL---FDRVDSRKNVVTWTAMVSGYLRSKQLSI------- 127
Query: 129 LLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNA 188
AE++F+E+ + N V W+ M+ GY Q + A
Sbjct: 128 ----------------------------AEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 189 MDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
++LF +MP R++V+W +++ +R + A++LF M R +V+ +D
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQR-GRIDEAMNLFERMPRRDVVSWTAMVD-------- 210
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIG-GALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
G GKV + D + N I A+ Y + ID+A ++++ M E N
Sbjct: 211 -GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM-PERDFASWN 268
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA------ 361
++I G I + +A +F + E N IS+ MI GY + + E++ +F KM
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 362 ----------------------------------PKNLTSLNTMISVYSKNGELDEAVKL 387
KN + ++++YSK+GEL A K+
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 388 FDK-TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLC 446
FD +R+ ++WNSM++ Y H+G EA+++Y MR+ S T+ L AC+
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 447 SFQQGQLLHAHLSKT---PFQANVYVGTALVDFYSKCGHLAD 485
++G L + P + Y T LVD + G L D
Sbjct: 449 LVEKGMEFFKDLVRDESLPLREEHY--TCLVDLCGRAGRLKD 488
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 31/354 (8%)
Query: 282 CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL-RETNPISYNLM 340
C I +A+++++ + E + +I G I +G + EA +F + N +++ M
Sbjct: 57 CKVGKIAEARKLFDGLP-ERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAM 115
Query: 341 IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
+ GY S Q+ ++ LF++M +N+ S NTMI Y+++G +D+A++LFD+ ERN V+W
Sbjct: 116 VSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP-ERNIVSW 174
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRL----------------SVDHSRSTFSVL-FRACT 443
NSM+ + G+ EA+ L+ M R VD +R F + R
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 444 SLCSFQQGQLLHAHLSKTP--FQA----NVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
S + G + + + FQ + ++ + + + A F + N
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIF 556
V +WT +I GY + E++ +F ML G V PN T+V+ILSACS L +G +I
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI- 353
Query: 557 HSMQICYRVTPTIEHYT-CVVDLLGRSGRLKEAEE-FINQMPIEADGVIWGALL 608
H + I V E T ++++ +SG L A + F N + + D + W +++
Sbjct: 354 HQL-ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 168/373 (45%), Gaps = 51/373 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL------ 90
V+S + AK G++ EAR +FD MP R + SWN MI+GY+Q R DEA L
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Query: 91 ---ASF------------MHRSC------VKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
AS+ M+++C + N IS++ +++ + V S +
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 130 LKSGFEKFGLVGS--ALLYFCVRCCGIGEA----ELVFEELRDGNHVLWSLMLSGYVQRD 183
L+ G K VG+ ++L C G+ E +L+ + + N ++ S +L+ Y +
Sbjct: 322 LRDGSVKPN-VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 184 MMGNAMDLF--GKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
+ A +F G + RD+++W ++I+ YA G E A++++ MR+ P+ T
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKE-AIEMYNQMRKHGFKPSAVTYLN 439
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
++ C+ HAG V G+ L D S+ + C D A R+ +
Sbjct: 440 LLFACS-----HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Query: 302 CLN--VANSLIGGLI----LMGRIEEAELIFYGLRET---NPISYNLMIKGYAMSSQIEK 352
C + ++ S G ++ + + A+ + + ET + +Y LM YA + + E+
Sbjct: 495 CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREE 554
Query: 353 SKRLFEKMAPKNL 365
+ + KM K L
Sbjct: 555 AAEMRMKMKEKGL 567
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 201/663 (30%), Positives = 323/663 (48%), Gaps = 51/663 (7%)
Query: 57 RHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARS 116
R ++ L +V++WN I E+L L M R + N +F V +CAR
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 117 GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLML 176
+ + VH+ L+KS F VG+A + V+C + A VFE
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFE-------------- 111
Query: 177 SGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNE 236
+MP RD W ++SG+ + ++A LFR MR +E+ P+
Sbjct: 112 -----------------RMPERDATTWNAMLSGFCQ-SGHTDKAFSLFREMRLNEITPDS 153
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
T+ +I+ + +L + +H + I+ G+D ++ Y +D AK V+E+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 297 MG-GEACLNVANSLIGGLILMGRIEEAELIFYGL------RETNP-ISYNLMIKGYAMSS 348
+ G+ + NS+ + G +A +GL E P +S + + +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDA----FGLYCLMLREEFKPDLSTFINLAASCQNP 269
Query: 349 QIEKSKRLFEKMA-----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
+ RL A +++ ++NT IS+YSK+ + A LFD R V+W M
Sbjct: 270 ETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD-IMTSRTCVSWTVM 328
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
+SGY G EAL L+ M + T L C S + G+ + A
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 464 Q-ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFR 522
+ NV + AL+D YSKCG + +A+ F + V WT +I GYA +G+ E++ LF
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 523 SMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRS 582
M+ PN TF+A+L AC+H+G L G E FH M+ Y ++P ++HY+C+VDLLGR
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 583 GRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILS 642
G+L+EA E I M + D IWGALLNA +++++ E+AAE LF+L+P + +V ++
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 643 NMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVD 702
N+YA G W IR ++ ++K PG S I++N H F+V + H ++VIY T++
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 628
Query: 703 HLT 705
L+
Sbjct: 629 GLS 631
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 209/496 (42%), Gaps = 53/496 (10%)
Query: 32 PHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALA 91
P V ++ K + A +F+ MP R ++WN M+SG+ Q G D+A +L
Sbjct: 82 PFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLF 141
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
M + + + ++ ++ S + SL L + +H++ ++ G + V + + +C
Sbjct: 142 REMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC 201
Query: 152 CGIGEAELVFEELRDGNH--VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
+ A+LVFE + G+ V W+ M Y + G A D FG
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAY---SVFGEAFDAFG---------------- 242
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
L+ M R E P+ T + C L G+++H I G D
Sbjct: 243 -------------LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ 289
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
D Y + A+ +++ M C++ +I G G ++EA +F+ +
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS-WTVMISGYAEKGDMDEALALFHAM 348
Query: 330 ----RETNPISYNLMIKGYAMSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGE 380
+ + ++ +I G +E K + + N+ N +I +YSK G
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
+ EA +FD T E+ VTW +M++GY NG EALKL+ M L + TF + +
Sbjct: 409 IHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 441 ACTSLCSFQQGQLLHAHLSKTPFQANVYVG----TALVDFYSKCGHLADAQRSFTSIFS- 495
AC S ++G + H+ K + N+ G + +VD + G L +A ++ +
Sbjct: 468 ACAHSGSLEKG-WEYFHIMKQVY--NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524
Query: 496 PNVAAWTALINGYAYH 511
P+ W AL+N H
Sbjct: 525 PDAGIWGALLNACKIH 540
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 17/320 (5%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
+ N I+ +K+ + AR +FD M RT SW MISGY++ G DEALAL M +S
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFG-LVGSALLYFCVRCCGIGEA 157
K + ++ +++S C + GSL GK + + G ++ ++ +AL+ +C I EA
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEA 412
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTLISGYARR 213
+F+ + V W+ M++GY + A+ LF KM D + + ++ A
Sbjct: 413 RDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA-H 471
Query: 214 EDGCERALDLFRCMRRS-EVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDN 271
E+ + F M++ + P C++ + R G L A +++ + K D
Sbjct: 472 SGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKP----DA 527
Query: 272 SIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE 331
I GAL + A++ ES+ N+ + + M I A ++ G
Sbjct: 528 GIWGALLNACKIHRNVKIAEQAAESL-----FNLEPQMAAPYVEMANIYAAAGMWDGFAR 582
Query: 332 TNPISYNLMIKGYAMSSQIE 351
I IK Y S I+
Sbjct: 583 IRSIMKQRNIKKYPGESVIQ 602
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 308/621 (49%), Gaps = 46/621 (7%)
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++L C R G G QVH LLKSG + + L+ +C
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKC---------------- 54
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ +M A +F MP R+VV+W+ L+SG+ D + +L LF M
Sbjct: 55 -------------REPLM--AYKVFDSMPERNVVSWSALMSGHVLNGD-LKGSLSLFSEM 98
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R + PNEFT ++ C L AL G +HG C+K G + +G +L + Y I
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN----PISYNL--MI 341
++A++V+ + + ++ N++I G + G +A F ++E N P + L ++
Sbjct: 159 NEAEKVFRRIVDRSLIS-WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 342 KGYAMSSQIEKSKRLFEKMA------PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
K + + I K++ + P + T +++ +Y K G L A K FD+ K E+
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EK 276
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
++W+S++ GY G+ EA+ L+ ++ L+ S + +QG+ +
Sbjct: 277 TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQ 336
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
A K P V ++VD Y KCG + +A++ F + +V +WT +I GY HGLG
Sbjct: 337 ALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGK 396
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
+S+ +F ML + P+ ++A+LSACSH+G++ +G E+F + + + P +EHY CV
Sbjct: 397 KSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
VDLLGR+GRLKEA+ I+ MPI+ + IW LL+ DIE+G+ + L +D
Sbjct: 457 VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 516
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSD 695
+ +V++SN+Y G W ++ R+ L+K+ G SW+E+ +H F + +H +
Sbjct: 517 ANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTP 576
Query: 696 VIYATVDHLTATINSIIPFNY 716
VI T+ + + + Y
Sbjct: 577 VIQETLKEAERRLREELGYVY 597
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 251/536 (46%), Gaps = 61/536 (11%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
++I++N I K E A +FD MP R V SW+ ++SG+ G +L+L S M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
R + NE +FS L +C +L G Q+H LK GFE VG++L+ +C I
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
EAE VF + D + + W+ M++G+V A+D FG M ++
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK-------------- 205
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS--I 273
ER P+EFTL +++ C+ G ++AGK +HG ++ G +S I
Sbjct: 206 --ER--------------PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN 333
G+L + Y + A++ ++ + E + +SLI G G EA +F L+E N
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQI-KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 334 PISYNLMIKGYAMSSQIE--------KSKRLFEKMA---PKNLTS--LNTMISVYSKNGE 380
I +A+SS I + + + +A P L + LN+++ +Y K G
Sbjct: 309 S-----QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
+DEA K F + + ++ ++W +++GY +G ++++++ M R +++ + +
Sbjct: 364 VDEAEKCFAEMQ-LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 441 ACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNV 498
AC+ ++G+ L + L +T + V +VD + G L +A+ ++ PNV
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 499 AAWTALINGYAYHG---LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
W L++ HG LG E +L++ N A +V + + AG N+
Sbjct: 483 GIWQTLLSLCRVHGDIELGKE----VGKILLRIDAKNPANYVMMSNLYGQAGYWNE 534
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 195/398 (48%), Gaps = 29/398 (7%)
Query: 232 VLPNEF-TLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
++PN+ L ++R+C R G G VH +K G + L + YC A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAM 346
+V++SM E + ++L+ G +L G ++ + +F + N +++ +K +
Sbjct: 61 YKVFDSM-PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 347 SSQIEKSKRL--------FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV 398
+ +EK ++ FE M N+++ +YSK G ++EA K+F + +R+ +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVG----NSLVDMYSKCGRINEAEKVFRRIV-DRSLI 174
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV--LFRACTSLCSFQQGQLLHA 456
+WN+M++G++H G S+AL + M+ ++ F++ L +AC+S G+ +H
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 457 HLSKTPFQ--ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
L ++ F ++ + +LVD Y KCG+L A+++F I + +W++LI GYA G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH--Y 572
E++ LF+ + ++ +I+ + LL G ++ + ++ +E
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM---QALAVKLPSGLETSVL 351
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
VVD+ + G + EAE+ +M ++ D + W ++
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITG 388
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 260/511 (50%), Gaps = 40/511 (7%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A+ +F M ++ + W +L+ G ++ A LF + + L C +R
Sbjct: 80 ALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVR--- 136
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
++F+ A+ + DR DA N
Sbjct: 137 ------------------NVNFEK------AQSFFDRMPFKDAAS-------------WN 159
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS 367
++I G G +E+A +FY + E N +S+N MI GY +EK+ F+ + + +
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA 219
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
MI+ Y K +++ A +F +N VTWN+M+SGY+ N + + LKL+ M
Sbjct: 220 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+ + S S C+ L + Q G+ +H +SK+ +V T+L+ Y KCG L DA
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
+ F + +V AW A+I+GYA HG +++ LFR M+ + P+ TFVA+L AC+HAG
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
L+N G+ F SM Y+V P +HYTC+VDLLGR+G+L+EA + I MP ++G L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
L A K++E+ E AAEKL L+ +G+V L+N+YA RW +RKR++ +
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 668 KDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
K PG SWIE+ N +H F D+ H D I+
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 49/328 (14%)
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAM 346
ID A RV+ M + + + LIG R+ EA +F + E + SYN+M+ Y
Sbjct: 77 IDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVR 136
Query: 347 SSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+ EK++ F++M K+ S NTMI+ Y++ GE+++A +LF + E+N V+WN+M+SG
Sbjct: 137 NVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF-YSMMEKNEVSWNAMISG 195
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
YI G +A +H K
Sbjct: 196 YIECGDLEKA---------------------------------------SHFFKVAPVRG 216
Query: 467 VYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHGLGSESILLFRSML 525
V TA++ Y K + A+ F + + N+ W A+I+GY + + + LFR+ML
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ---ICYRVTPTIEHYTCVVDLLGRS 582
+G+ PN++ + L CS L G +I + +C VT T ++ + +
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA----LTSLISMYCKC 332
Query: 583 GRLKEAEEFINQMPIEADGVIWGALLNA 610
G L +A + M + D V W A+++
Sbjct: 333 GELGDAWKLFEVMK-KKDVVAWNAMISG 359
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 178/396 (44%), Gaps = 25/396 (6%)
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
EA +F+E+ + + +++MLS YV+ A F +MP +D +W T+I+GYARR +
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE 170
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
E+A +LF M NE + + +I G L + G+
Sbjct: 171 -MEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWT 221
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE--TN 333
A+ Y ++ A+ +++ M L N++I G + R E+ +F + E
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 334 PISYNL--MIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKL 387
P S L + G + S ++ +++ + ++ L T+L ++IS+Y K GEL +A KL
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
F+ K +++ V WN+M+SGY +G +AL L+ M + TF + AC
Sbjct: 342 FEVMK-KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 448 FQQGQLLHAHLS---KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTA 503
G + K Q + Y T +VD + G L +A + S+ F P+ A +
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHY--TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGT 458
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
L+ H E L+Q NAA +V +
Sbjct: 459 LLGACRVHK-NVELAEFAAEKLLQLNSQNAAGYVQL 493
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 163/351 (46%), Gaps = 32/351 (9%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
+ EA +FDE+P S+N M+S Y + +++A SF R K + S++ +++
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKA---QSFFDRMPFK-DAASWNTMITG 164
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
AR G + ++ L S EK + +A++ + C + +A F+ V W
Sbjct: 165 YARRGEMEKARE----LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW 220
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPV-RDVVAWTTLISGY---ARREDGCERALDLFRCMR 228
+ M++GY++ + A +F M V +++V W +ISGY +R EDG L LFR M
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDG----LKLFRAML 276
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
+ PN L + C+ L AL G+ +H + K L D + +L YC +
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMIKGY 344
DA +++E M + + N++I G G ++A +F + + P I++ ++
Sbjct: 337 DAWKLFEVMKKKDVV-AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC 395
Query: 345 AMSSQIEKSKRLFEKMA--------PKNLTSLNTMISVYSKNGELDEAVKL 387
+ + FE M P + T M+ + + G+L+EA+KL
Sbjct: 396 NHAGLVNIGMAYFESMVRDYKVEPQPDHYT---CMVDLLGRAGKLEEALKL 443
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 49/332 (14%)
Query: 47 RAKTGELAEARHMFDEMPL-RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEIS 105
+AK ELAEA MF +M + + + +WN MISGY + R ++ L L M ++ N
Sbjct: 229 KAKKVELAEA--MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
S+ L C+ +L LG+Q+H ++ KS ++L+ +C +G+A +FE ++
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
+ V W+ M+SGY Q GNA ++AL LFR
Sbjct: 347 KKDVVAWNAMISGYAQH---GNA-----------------------------DKALCLFR 374
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
M +++ P+ T V+ C HAG V G+ + + D + + C D
Sbjct: 375 EMIDNKIRPDWITFVAVLLACN-----HAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 429
Query: 286 ------AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELI---FYGLRETNPIS 336
+++A ++ SM V +L+G + +E AE L N
Sbjct: 430 LLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAG 489
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL 368
Y + YA ++ E R+ ++M N+ +
Sbjct: 490 YVQLANIYASKNRWEDVARVRKRMKESNVVKV 521
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
I+ K GEL +A +F+ M + V +WN MISGY+Q G D+AL L M + ++ +
Sbjct: 326 ISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDW 385
Query: 104 ISFSAVLSSCARSGSLFLG 122
I+F AVL +C +G + +G
Sbjct: 386 ITFVAVLLACNHAGLVNIG 404
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 207/660 (31%), Positives = 333/660 (50%), Gaps = 52/660 (7%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
H++ST +S+ + A G + AR +F+EMP ++ S+N +I Y + G Y +A+++ M
Sbjct: 50 HILST-LSVTY-ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 96 RSCVKL--NEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
VK + ++ V + S+ LG VH +L+S F + V +ALL +
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYM---N 164
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
G+ E+ A D+F M RDV++W T+ISGY R
Sbjct: 165 FGKVEM----------------------------ARDVFDVMKNRDVISWNTMISGY-YR 195
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
AL +F M V + T+ ++ +C L L G+ VH L + L +
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-ELI----FYG 328
AL Y +D+A+ V++ M + +I G G +E A EL F G
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVI-TWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRL----FEKMAPKNLTSLNTMISVYSKNGELDEA 384
+R N ++ ++ + ++ K L + ++ ++IS+Y+K +D
Sbjct: 315 VRP-NAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 385 VKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
++F + ++ W+++++G + N S+AL L+ MRR V+ + +T + L A +
Sbjct: 374 FRVFSGAS-KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 445 LCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAA 500
L +Q +H +L+KT F +++ T LV YSKCG L A + F I S +V
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL 492
Query: 501 WTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
W ALI+GY HG G ++ +F M+ GV PN TF + L+ACSH+GL+ +GL +F M
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML 552
Query: 561 ICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVG 620
Y+ HYTC+VDLLGR+GRL EA I +P E +WGALL A +++++G
Sbjct: 553 EHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLG 612
Query: 621 ERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNN 680
E AA KLF L+P +V+L+N+YA LGRW +R ++++ LRK PG S IE+ +N
Sbjct: 613 EMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSN 672
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 12/298 (4%)
Query: 330 RETNPIS----YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS---LNTMISVYSKNGELD 382
R N +S Y ++ +A + I K+K L + S L+T+ Y+ G +
Sbjct: 7 RANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIT 66
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD--HSRSTFSVLFR 440
A KLF++ + + +++N ++ Y+ G + +A+ +++ M V T+ + +
Sbjct: 67 YARKLFEEMP-QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAK 125
Query: 441 ACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA 500
A L S + G ++H + ++ F + YV AL+ Y G + A+ F + + +V +
Sbjct: 126 AAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVIS 185
Query: 501 WTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
W +I+GY +G ++++++F M+ + V + AT V++L C H L G + H +
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV-HKLV 244
Query: 561 ICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIE 618
R+ IE +V++ + GR+ EA ++M D + W ++N D+E
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVE 301
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 201/687 (29%), Positives = 344/687 (50%), Gaps = 41/687 (5%)
Query: 14 CKRVEKFRLFTTLLRDSEPHHPHVI----STNISIAHRAKTGE-----LAEARHMFDEMP 64
C +V+ F+ E HVI S N+ IA+ + L++A +FDEM
Sbjct: 15 CGKVQAFK-------RGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 65 LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKL-NEISFSAVLSSCARSGSLFLGK 123
R + +W TM+SGY+ G+ ++A+ L M S + NE +SAVL +C G + LG
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
V+ + K ++ ++++ V+ + EA F+E+ + W+ ++SGY +
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
+M A+ LF +MP +VV+W LISG+ + G RAL+ M+R ++ + F L C +
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDK--GSPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY--ESMGGEA 301
+ C+ G L GK +H +K GL+ AL + Y + ++ A V+ E + +
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA 361
+ V NS++ G ++ E A + + +++ L Y +S ++
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSD-----LCFDSYTLSGALKICINYVNLRL 360
Query: 362 PKNLTSL-------------NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
+ SL + ++ +++ G + +A KLF + ++ + ++ ++ G +
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCV 419
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
+G +S A L+ + +L +D + S + + C+SL S G+ +H K +++
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 469 VGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG 528
TALVD Y KCG + + F + +V +WT +I G+ +G E+ F M+ G
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG 539
Query: 529 VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
+ PN TF+ +LSAC H+GLL + +M+ Y + P +EHY CVVDLLG++G +EA
Sbjct: 540 IEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEA 599
Query: 589 EEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAIL 648
E IN+MP+E D IW +LL A K+ + AEKL P+ S + LSN YA L
Sbjct: 600 NELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATL 659
Query: 649 GRWGQKTTIRKRLQSLELRKDPGCSWI 675
G W Q + +R+ + L K+ G SWI
Sbjct: 660 GMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/581 (21%), Positives = 242/581 (41%), Gaps = 80/581 (13%)
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
+A L C + + G+ + + ++K G + + + ++ V + +A VF+E+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
+ N V W+ M+SGY A++L+ +M
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRM------------------------------ 97
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
+ E NEF V++ C +G + G +V+ K+ L D + ++ + Y
Sbjct: 98 -LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNG 156
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGY- 344
+ +A ++ + + + N+LI G G ++EA +F+ + + N +S+N +I G+
Sbjct: 157 RLIEANSSFKEILRPSSTS-WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFV 215
Query: 345 ---------------------------------AMSSQIEKSKRLFEKMAPKNLTS---- 367
+ + K+L + L S
Sbjct: 216 DKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFA 275
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNS--VTWNSMMSGYIHNGQHSEALKLYVTMRR 425
++ +I +YS G L A +F + K NS WNSM+SG++ N ++ AL L + + +
Sbjct: 276 ISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
+ T S + C + + + G +H+ + + ++ + VG+ LVD ++ G++ D
Sbjct: 336 SDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQD 395
Query: 486 AQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
A + F + + ++ A++ LI G G S + LFR ++ G+ + IL CS
Sbjct: 396 AHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSS 455
Query: 546 AGLLNDGLEIFHSMQI--CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
L G +I H + I Y P T +VD+ + G + + M +E D V
Sbjct: 456 LASLGWGKQI-HGLCIKKGYESEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVS 511
Query: 604 WGALLNASWFWKDIEVGERAAEKLFS--LDPNPISGFVILS 642
W ++ +E R K+ + ++PN ++ +LS
Sbjct: 512 WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 195/669 (29%), Positives = 335/669 (50%), Gaps = 67/669 (10%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
S N ++ +K G++ FD++P R SW TMI GY G+Y +A+ + M +
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAE 158
++ + + + VL+S A + + GK+VHS ++K G V ++LL +C A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE 218
VF+ +M VRD+ +W +I+ + + +
Sbjct: 202 FVFD-------------------------------RMVVRDISSWNAMIALHMQVGQ-MD 229
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
A+ F M +++ T + +I G G + L I F +
Sbjct: 230 LAMAQFEQMAERDIV----TWNSMIS-----GFNQRGYDLRALDI-----FSKML----- 270
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN 338
RD++ R + AC N+ IG I + ++ G + + I N
Sbjct: 271 -----RDSLLSPDRFTLASVLSACANLEKLCIGKQI------HSHIVTTGF-DISGIVLN 318
Query: 339 LMIKGYAMSSQIEKSKRLFEKMAPKNLT--SLNTMISVYSKNGELDEAVKLFDKTKGERN 396
+I Y+ +E ++RL E+ K+L ++ Y K G++++A +F K +R+
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK-DRD 377
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
V W +M+ GY +G + EA+ L+ +M + T + + +SL S G+ +H
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF-SPNVAAWTALINGYAYHGLGS 515
K+ +V V AL+ Y+K G++ A R+F I + +WT++I A HG
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
E++ LF +ML++G+ P+ T+V + SAC+HAGL+N G + F M+ ++ PT+ HY C+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
VDL GR+G L+EA+EFI +MPIE D V WG+LL+A K+I++G+ AAE+L L+P
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENS 617
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSD 695
+ L+N+Y+ G+W + IRK ++ ++K+ G SWIE+ + +H+F VED TH +
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKN 677
Query: 696 VIYATVDHL 704
IY T+ +
Sbjct: 678 EIYMTMKKI 686
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 156/594 (26%), Positives = 261/594 (43%), Gaps = 90/594 (15%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQ---------------------W----- 81
+KTG AR +FDEMPLRT SWNT++S YS+ W
Sbjct: 60 SKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIV 119
Query: 82 -----GRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEK 136
G+Y +A+ + M + ++ + + + VL+S A + + GK+VHS ++K G
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 137 FGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMP 196
V ++LL +C A+ VF+ + + W+ M++ ++Q M AM F +M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 197 VRDVVAWTTLISGYARREDGCE-RALDLFRCMRRSEVL-PNEFTLDCVIRICARLGALHA 254
RD+V W ++ISG+ +R G + RALD+F M R +L P+ FTL V+ CA L L
Sbjct: 240 ERDIVTWNSMISGFNQR--GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 255 GKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC-LNVANSLIGGL 313
GK +H + G D + AL Y ++ A+R+ E G + + +L+ G
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 314 ILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTSL 368
I +G + +A+ IF L++ + +++ MI GY ++ LF M P + T
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 369 ----------------------------------NTMISVYSKNGELDEAVKLFDKTKGE 394
N +I++Y+K G + A + FD + E
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG-QL 453
R++V+W SM+ +G EAL+L+ TM + T+ +F ACT QG Q
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH- 511
+ +VD + + G L +AQ + P+V W +L++ H
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 512 -----GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
+ +E +LL N+ + A+ + S G + +I SM+
Sbjct: 598 NIDLGKVAAERLLLLEP-------ENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 193/383 (50%), Gaps = 15/383 (3%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
+ S N IA + G++ A F++M R + +WN+MISG++Q G AL + S M R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 97 -SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
S + + + ++VLS+CA L +GKQ+HS ++ +GF+ G+V +AL+ RC G+
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 156 EAELVFEE--LRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
A + E+ +D ++ +L GY++ M A ++F + RDVVAWT +I GY +
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
E A++LFR M PN +TL ++ + + L +L GK +HG +K G + S+
Sbjct: 392 GSYGE-AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYG 328
AL Y I A R ++ + E S+I L G EEA ++ G
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP-----KNLTSLNTMISVYSKNGELDE 383
LR + I+Y + + + + ++ F+ M L+ M+ ++ + G L E
Sbjct: 511 LR-PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 384 AVKLFDKTKGERNSVTWNSMMSG 406
A + +K E + VTW S++S
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSA 592
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 326/644 (50%), Gaps = 49/644 (7%)
Query: 48 AKTGELAEARHMFDEMPLRTVS--SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEIS 105
A E+ ARH+FDE+P ++ +W+ MI Y+ ++AL L M S V+ + +
Sbjct: 46 ASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYT 105
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
+ VL +CA ++ GK +HS + S F V +AL+ F +C + A VF+E+
Sbjct: 106 YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
+ V W+ M+SG+ + + + LF M RR DG
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDM----------------RRIDGLS------- 202
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
PN T+ + R GAL GK VHG C + G D + + + Y
Sbjct: 203 --------PNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSK 254
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN------PISYNL 339
I A+RV++ + + +++IGG + I+EA +F+ + + P++ L
Sbjct: 255 CIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL 313
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
++ G A + R A K +LT NT+IS Y+K G L +A + F + G
Sbjct: 314 ILMGCARFGDLS-GGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEI-GL 371
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
++ +++NS+++G + N + E+ +L+ MR + +T + AC+ L + G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
H + + N + AL+D Y+KCG L A+R F ++ ++ +W ++ G+ HGLG
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC-YRVTPTIEHYT 573
E++ LF SM GV P+ T +AILSACSH+GL+++G ++F+SM + V P I+HY
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 574 CVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPN 633
C+ DLL R+G L EA +F+N+MP E D + G LL+A W +K+ E+G ++K+ SL
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGET 611
Query: 634 PISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIEL 677
S V+LSN Y+ RW IR + L K PG SW+++
Sbjct: 612 TES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQ-ANVYVGTALVDFYSKCGHLADAQRSFTSI 493
F L C + GQ++H HL K ++ V L Y+ C + A+ F I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 494 FSP--NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
P N AW +I YA + +++ L+ ML GV P T+ +L AC+ ++D
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
G ++ HS C + T +VD + G L+ A + ++MP + D V W A+++
Sbjct: 122 G-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISG 178
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N I+ AK G L +A F E+ L+ V S+N++I+G R +E+ L M S ++
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
+ + VL++C+ +L G H + G+ + +AL+ +C + A+ V
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV 466
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F+ + + V W+ ML G FG I G + A
Sbjct: 467 FDTMHKRDIVSWNTMLFG-------------FG-------------IHGLGK------EA 494
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
L LF M+ + V P+E TL ++ C+ G + GK
Sbjct: 495 LSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 288/558 (51%), Gaps = 44/558 (7%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A+ +F + +++ W T+ G+A D AL L+ CM +LPN +T V++ CA
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
+ A G+ +HG +K G D D + +L Y ++DA +V++ ++
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT- 204
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP----- 362
+LI G G IE A+ +F + + +S+N MI GYA + +++ LF+ M
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 363 ----------------------------------KNLTSLNTMISVYSKNGELDEAVKLF 388
NL +N +I +YSK GEL+ A LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
++ ++ ++WN+++ GY H + EAL L+ M R + T + AC L +
Sbjct: 325 ERLP-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 449 QQGQLLHAHLSK--TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALIN 506
G+ +H ++ K + T+L+D Y+KCG + A + F SI ++++W A+I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 507 GYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVT 566
G+A HG S LF M G+ P+ TFV +LSACSH+G+L+ G IF +M Y++T
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 567 PTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEK 626
P +EHY C++DLLG SG KEAEE IN M +E DGVIW +LL A ++E+GE AE
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 563
Query: 627 LFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSV 686
L ++P +V+LSN+YA GRW + R L ++K PGCS IE+++ +H F +
Sbjct: 564 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 687 EDKTHAYSDVIYATVDHL 704
DK H + IY ++ +
Sbjct: 624 GDKFHPRNREIYGMLEEM 641
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 196/383 (51%), Gaps = 13/383 (3%)
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
WNTM G++ AL L M + N +F VL SCA+S + G+Q+H +L
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
K G + V ++L+ V+ + +A VF++ + V ++ ++ GY R + NA
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
LF ++PV+DVV+W +ISGYA + E AL+LF+ M ++ V P+E T+ V+ CA+ G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKE-ALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
++ G+ VH G + I AL + Y ++ A ++E + + ++ N+LI
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS-WNTLI 339
Query: 311 GGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK--- 363
GG M +EA L+F + N ++ ++ A I+ + + + +
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 364 --NLTSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
N +SL T +I +Y+K G+++ A ++F+ + S +WN+M+ G+ +G+ + L+
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS-SWNAMIFGFAMHGRADASFDLF 458
Query: 421 VTMRRLSVDHSRSTFSVLFRACT 443
MR++ + TF L AC+
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACS 481
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 189/390 (48%), Gaps = 47/390 (12%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL 88
D PH V+S I A G + A+ +FDE+P++ V SWN MISGY++ G Y EAL
Sbjct: 193 DKSPHR-DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L M ++ V+ +E + V+S+CA+SGS+ LG+QVH + GF + +AL+
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
+C + A +FE L + + W+ ++ GY M+L+
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTH-------MNLY---------------- 348
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIK--DG 266
+ AL LF+ M RS PN+ T+ ++ CA LGA+ G+ +H K G
Sbjct: 349 ---------KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF 326
+ +S+ +L + Y I+ A +V+ S+ ++ L+ N++I G + GR + + +F
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS-LSSWNAMIFGFAMHGRADASFDLF 458
Query: 327 YGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFE------KMAPKNLTSLNTMISVYS 376
+R + + I++ ++ + S ++ + +F KM PK L MI +
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK-LEHYGCMIDLLG 517
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+G EA ++ + + E + V W S++
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 76/387 (19%)
Query: 318 RIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSK 377
RI A++I GL TN YA+S IE F ++P + L ISV+
Sbjct: 50 RIIHAQMIKIGLHNTN----------YALSKLIE-----FCILSP-HFEGLPYAISVF-- 91
Query: 378 NGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV 437
KT E N + WN+M G+ + ALKLYV M L + + TF
Sbjct: 92 ------------KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
+ ++C +F++GQ +H H+ K ++YV T+L+ Y + G L DA + F +
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 498 VAAWTALINGYAYHGL-------------------------------GSESILLFRSMLV 526
V ++TALI GYA G E++ LF+ M+
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 527 QGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLK 586
V P+ +T V ++SAC+ +G + G ++ H + ++ ++DL + G L+
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 587 EAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERA----AEKLFSLD-PNPISGFVIL 641
A ++P + D + W L+ + + + + A E L S + PN ++ IL
Sbjct: 319 TACGLFERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 642 ---SNMYAI-LGRWGQKTTIRKRLQSL 664
+++ AI +GRW I KRL+ +
Sbjct: 375 PACAHLGAIDIGRWIH-VYIDKRLKGV 400
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 184/639 (28%), Positives = 313/639 (48%), Gaps = 46/639 (7%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS---CVKLNEI 104
+K G L +A +FDEMP R V +W +ISG+ Q G + L MH + K N
Sbjct: 172 SKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+ +C+ G+L G+ +H +K+G V S++ F + EA L F EL
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
D D+ +WT++I+ AR D E + D+F
Sbjct: 292 GD-------------------------------EDMFSWTSIIASLARSGD-MEESFDMF 319
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
M+ + P+ + C+I ++ + GK HG I+ D+++ +L YC
Sbjct: 320 WEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKF 379
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLM 340
+ + A++++ + E N+++ G M + +F ++ E + S +
Sbjct: 380 ELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSV 439
Query: 341 IKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGERN 396
I + + K L + +L + +N++I +Y K G+L A ++F + + N
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTN 497
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
+TWN+M++ Y+H Q +A+ L+ M + S T L AC + S ++GQ++H
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
++++T + N+ + AL+D Y+KCGHL ++ F + + W +I+GY HG
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
+I LF M V P TF+A+LSAC+HAGL+ G ++F M Y V P ++HY+C+V
Sbjct: 618 AIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLV 676
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPIS 636
DLL RSG L+EAE + MP DGVIWG LL++ + E+G R AE+ + DP
Sbjct: 677 DLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDG 736
Query: 637 GFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWI 675
+++L+NMY+ G+W + R+ ++ + K G S +
Sbjct: 737 YYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 157/621 (25%), Positives = 275/621 (44%), Gaps = 67/621 (10%)
Query: 38 ISTNISIAHR-----AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
+S NI +A + A G+ + +F + R + WN++I + G Y +L
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFF 114
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK-SGFEKFGLVGSALLYFCVRC 151
M S + + V+S+CA +G VH L+LK GF++ VG++ +YF +C
Sbjct: 115 SMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKC 174
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
+ +A LVF+E MP RDVVAWT +ISG+
Sbjct: 175 GFLQDACLVFDE-------------------------------MPDRDVVAWTAIISGHV 203
Query: 212 RREDGCERALDLFRCMRR--SEV-LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
+ + E L M S+V PN TL+C + C+ LGAL G+ +HG +K+GL
Sbjct: 204 QNGES-EGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
+ ++ FY +A + +G E + S+I L G +EE+ +F+
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS-WTSIIASLARSGDMEESFDMFWE 321
Query: 329 LRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL-----NTMISVYSKNG 379
++ + + + +I + + K F ++ SL N+++S+Y K
Sbjct: 322 MQNKGMHPDGVVISCLINELGKMMLVPQGKA-FHGFVIRHCFSLDSTVCNSLLSMYCKFE 380
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
L A KLF + E N WN+M+ GY H + ++L+ ++ L ++ ++ + +
Sbjct: 381 LLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVI 440
Query: 440 RACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVA 499
+C+ + + G+ LH ++ KT + V +L+D Y K G L A R F NV
Sbjct: 441 SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVI 499
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
W A+I Y + ++I LF M+ + P++ T V +L AC + G L G
Sbjct: 500 TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG------- 552
Query: 560 QICYRVTPTIEH------YTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWF 613
Q+ +R EH ++D+ + G L+++ E + + D V W +++
Sbjct: 553 QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGM 611
Query: 614 WKDIEVGERAAEKLFSLDPNP 634
D+E +++ D P
Sbjct: 612 HGDVESAIALFDQMEESDVKP 632
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 278/584 (47%), Gaps = 96/584 (16%)
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+ L C++ L KQ+H+ +LK+G + + L FC+
Sbjct: 19 SCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCI------------------ 57
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
D + A +F D W +I G++ D ER+L L++ M
Sbjct: 58 ----------SSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSC-SDEPERSLLLYQRM 106
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
S N +T +++ C+ L A +H K G + D
Sbjct: 107 LCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND----------------- 149
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMS 347
VY NSLI + G + A L+F + E + +S+N +IKGY +
Sbjct: 150 -----VY----------AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 348 SQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY 407
+++ + LF KMA KN S TMI SGY
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMI--------------------------------SGY 222
Query: 408 IHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANV 467
+ + EAL+L+ M+ V+ + + AC L + +QG+ +H++L+KT + +
Sbjct: 223 VQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDS 282
Query: 468 YVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ 527
+G L+D Y+KCG + +A F +I +V AWTALI+GYAYHG G E+I F M
Sbjct: 283 VLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKM 342
Query: 528 GVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKE 587
G+ PN TF A+L+ACS+ GL+ +G IF+SM+ Y + PTIEHY C+VDLLGR+G L E
Sbjct: 343 GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 588 AEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAI 647
A+ FI +MP++ + VIWGALL A K+IE+GE E L ++DP +V +N++A+
Sbjct: 403 AKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAM 462
Query: 648 LGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTH 691
+W + R+ ++ + K PGCS I L H F D++H
Sbjct: 463 DKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 506
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 195/412 (47%), Gaps = 17/412 (4%)
Query: 5 LRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGE-LAEARHMFDEM 63
L+ C + K++ L T L++DS + I+ +S + + + L A+ +FD
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDS-----YAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 64 PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
WN MI G+S + +L L M S N +F ++L +C+ +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
Q+H+ + K G+E ++L+ A L+F+ + + + V W+ ++ GYV+
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
M A+ LF KM ++ ++WTT+ISGY + D + AL LF M+ S+V P+ +L +
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYV-QADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
CA+LGAL GK +H K + D+ +G L + Y +++A V++++ ++ +
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS-V 313
Query: 304 NVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEK 359
+LI G G EA F ++ + N I++ ++ + + +E+ K +F
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 360 MA-----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
M + ++ + + G LDEA + + + N+V W +++
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 332/664 (50%), Gaps = 47/664 (7%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF---MHRS 97
N+ + AK G+LA+A +F+ + + V SWN++I+GYSQ G + + M
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
+ N + + + + + S +G+Q H+L++K FG + Y G+
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK--MSSFGDI-----YVDTSLVGM--- 162
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
Y + ++ + + +F MP R+ W+T++SGYA R
Sbjct: 163 ---------------------YCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR-GRV 200
Query: 218 ERALDLFRCMRRS--EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
E A+ +F R E +++ V+ A + G+ +H + IK+GL ++
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET--N 333
AL Y +++++A ++++S G + + +++ G G EA +F +
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWS-AMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 334 PISYNLMIKGYAMSS--QIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVKL 387
P Y ++ A S +E+ K+L + ++L + ++ +Y+K G L +A K
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
FD + ER+ W S++SGY+ N + EAL LY M+ + + T + + +AC+SL +
Sbjct: 380 FDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
+ G+ +H H K F V +G+AL YSKCG L D F + +V +W A+I+G
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
+++G G E++ LF ML +G+ P+ TFV I+SACSH G + G F+ M + P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL 627
++HY C+VDLL R+G+LKEA+EFI I+ +W LL+A E+G A EKL
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
Query: 628 FSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVE 687
+L S +V LS +Y LGR + K +++ + K+ GCSWIEL N H+F V
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVG 678
Query: 688 DKTH 691
D H
Sbjct: 679 DTMH 682
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/633 (30%), Positives = 314/633 (49%), Gaps = 83/633 (13%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+F +L LF GK +H+L +KS + + + +C + A F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
+ N +++++ Y + + A LF ++P D V++ TLISGYA + A+ LF
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA-AMVLF 128
Query: 225 RCMRRSEVLPNEFTLDCVIRICA-RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCD 283
+ MR+ + FTL +I C R+ + K +H + G D +S+ A +Y
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE-TNPISYNLMIK 342
GGL+ EA +FYG+ E + +S+N MI
Sbjct: 186 ---------------------------GGLL-----REAVSVFYGMDELRDEVSWNSMIV 213
Query: 343 GYAMSSQIEKSKRLFEKMAPKN--------------LTSLN------------------- 369
Y + K+ L+++M K LTSL+
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 370 ------TMISVYSKNGELD---EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE-ALKL 419
+I YSK G D ++ K+F + + V WN+M+SGY N + SE A+K
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP-DLVVWNTMISGYSMNEELSEEAVKS 332
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN-VYVGTALVDFYS 478
+ M+R+ +F + AC++L S Q + +H K+ +N + V AL+ Y
Sbjct: 333 FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
K G+L DA+ F + N ++ +I GYA HG G+E++LL++ ML G+ PN TFVA
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+LSAC+H G +++G E F++M+ +++ P EHY+C++DLLGR+G+L+EAE FI+ MP +
Sbjct: 453 VLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIR 658
V W ALL A K++ + ERAA +L + P + +V+L+NMYA +W + ++R
Sbjct: 513 PGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVR 572
Query: 659 KRLQSLELRKDPGCSWIELNNNIHMFSVEDKTH 691
K ++ +RK PGCSWIE+ H+F ED +H
Sbjct: 573 KSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 223/495 (45%), Gaps = 56/495 (11%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P+V S N+ + AK ++ AR +FDE+P S+NT+ISGY+ A+ L M
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
+ +++ + S ++++C L KQ+H + GF+ + V +A + + + +
Sbjct: 132 RKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 155 GEAELVF---EELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
EA VF +ELRD V W+ M+ Y Q A+ L+ +M + G+
Sbjct: 190 REAVSVFYGMDELRD--EVSWNSMIVAYGQHKEGAKALALYKEM----------IFKGF- 236
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
+D+ FTL V+ L L G+ HG IK G ++
Sbjct: 237 --------KIDM-------------FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS 275
Query: 272 SIGGALAEFYCD---RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRI-EEAELIFY 327
+G L +FY D + D+++V++ + L V N++I G + + EEA F
Sbjct: 276 HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD-LVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 328 GLR----ETNPISYNLMIKGYAMSSQIEKSKRL----FEKMAPKNLTSLNT-MISVYSKN 378
++ + S+ + + S + K++ + P N S+N +IS+Y K+
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL 438
G L +A +FD+ E N+V++N M+ GY +G +EAL LY M + ++ TF +
Sbjct: 395 GNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAV 453
Query: 439 FRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSP 496
AC +GQ + +T + + ++D + G L +A+R ++ + P
Sbjct: 454 LSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKP 513
Query: 497 NVAAWTALINGYAYH 511
AW AL+ H
Sbjct: 514 GSVAWAALLGACRKH 528
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 36 HVISTNISIAHRA-----KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
H+ S IS+ + K+G L +AR +FD MP S+N MI GY+Q G EAL L
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV- 149
M S + N+I+F AVLS+CA G + G++ + + E F + A Y C+
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK----ETFKIEPEAEHYSCMI 490
Query: 150 ----RCCGIGEAELVFEEL--RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAW 203
R + EAE + + + G+ V W+ +L + M A ++ V +A
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGS-VAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 204 TTLI 207
T +
Sbjct: 550 TPYV 553
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/649 (29%), Positives = 327/649 (50%), Gaps = 48/649 (7%)
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
N +S Y G+Y L + M S V+ ++++F +L++ + SL LG+QVH + LK
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 132 SGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
G + V ++L+ + Y + G A +
Sbjct: 344 LGLDLMLTVSNSLI-------------------------------NMYCKLRKFGFARTV 372
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCE-RALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
F M RD+++W ++I+G A ++G E A+ LF + R + P+++T+ V++ + L
Sbjct: 373 FDNMSERDLISWNSVIAGIA--QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 251 -ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
L K VH IK D+ + AL + Y + +A+ ++E + L N++
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD--LVAWNAM 488
Query: 310 IGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
+ G + +F + + ++ + + K I + K++ A K+
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV-HAYAIKSG 547
Query: 366 TSLNTMIS-----VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
L+ +S +Y K G++ A FD + V W +M+SG I NG+ A ++
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTMISGCIENGEEERAFHVF 606
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
MR + V T + L +A + L + +QG+ +HA+ K + +VGT+LVD Y+KC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 481 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
G + DA F I N+ AW A++ G A HG G E++ LF+ M G+ P+ TF+ +L
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 541 SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD 600
SACSH+GL+++ + SM Y + P IEHY+C+ D LGR+G +K+AE I M +EA
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 601 GVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKR 660
++ LL A D E G+R A KL L+P S +V+LSNMYA +W + R
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 846
Query: 661 LQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATIN 709
++ +++KDPG SWIE+ N IH+F V+D+++ +++IY V + I
Sbjct: 847 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIK 895
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 162/632 (25%), Positives = 282/632 (44%), Gaps = 66/632 (10%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGR-----YDEA 87
+P N I+ +K G L AR +FD+MP R + SWN++++ Y+Q +A
Sbjct: 70 ENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 88 LALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYF 147
L + + V + ++ S +L C SG ++ + H K G + V AL+
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 148 CVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL------FGKMPVRDVV 201
++ + E +++FEE+ + VLW+LML Y++ A+DL G P +
Sbjct: 190 YLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Query: 202 AWTTLISG----------YARREDGCERALDLFR------------------C---MRRS 230
ISG +A D + +FR C M S
Sbjct: 250 RLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES 309
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+V ++ T ++ ++ +L G+ VH + +K GLD ++ +L YC A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET--NPISYNL--------- 339
+ V+++M E L NS+I G+ G EA +F L P Y +
Sbjct: 370 RTVFDNM-SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
+ +G ++S Q+ ++ +++ +I YS+N + EA LF++ + V
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVST--ALIDAYSRNRCMKEAEILFERHNFDL--VA 484
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
WN+MM+GY + + LKL+ M + T + +F+ C L + QG+ +HA+
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
K+ + +++V + ++D Y KCG ++ AQ +F SI P+ AWT +I+G +G +
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
+F M + GVLP+ T + A S L G +I H+ + T T +VD+
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSLVDMY 663
Query: 580 GRSGRLKEAE---EFINQMPIEADGVIWGALL 608
+ G + +A + I M I A W A+L
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITA----WNAML 691
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 206/463 (44%), Gaps = 52/463 (11%)
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED--- 215
L FEE + L + ++S Y + + A +F KMP RD+V+W ++++ YA+ +
Sbjct: 66 LTFEE--NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 216 -GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
++A LFR +R+ V + TL ++++C G + A + HG K GLD D +
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA 183
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
GAL Y + G+++E +++F + +
Sbjct: 184 GALVNIY--------------------------------LKFGKVKEGKVLFEEMPYRDV 211
Query: 335 ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSK-NGELDEAVKLFDKTKG 393
+ +NLM+K Y E++ L L + + ++ +G+ +A ++ G
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANG 271
Query: 394 ERNS-----VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
S + N +S Y+H+GQ+S LK + M V+ + TF ++ + S
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
GQ +H K + V +L++ Y K A+ F ++ ++ +W ++I G
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI-CYRVTP 567
A +GL E++ LF +L G+ P+ T ++L A S L +GL + + + ++
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINN 448
Query: 568 TIEHY--TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ + T ++D R+ +KEAE + D V W A++
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMM 489
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 46/315 (14%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G+++ A+ FD +P+ +W TMISG + G + A + S M V +E + +
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
+ + + +L G+Q+H+ LK VG++L+ +C I +A +F+ + N
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 683
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
W+ ML G Q +G E L LF+ M+
Sbjct: 684 ITAWNAMLVGLAQHG-------------------------------EGKE-TLQLFKQMK 711
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA-- 286
+ P++ T V+ C+ H+G V + D I + + C DA
Sbjct: 712 SLGIKPDKVTFIGVLSACS-----HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 287 ----IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI---SYNL 339
+ A+ + ESM EA ++ +L+ + G E + + L E P+ +Y L
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826
Query: 340 MIKGYAMSSQIEKSK 354
+ YA +S+ ++ K
Sbjct: 827 LSNMYAAASKWDEMK 841
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
F L A TS G+ HA + ++ L+ YSKCG L A+R F +
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 495 SPNVAAWTALINGYAYHGLG-----SESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
++ +W +++ YA ++ LLFR + V + T +L C H+G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
E FH + +V++ + G++KE + +MP D V+W +L
Sbjct: 162 WAS-ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLK 219
Query: 610 A--SWFWKDIEVGERAAEKLFSLDPNPIS 636
A +K+ + +A L+PN I+
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/717 (28%), Positives = 344/717 (47%), Gaps = 84/717 (11%)
Query: 4 FLRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEM 63
L C C++V L + + S ++IS A+ G L +AR++F+ +
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISV------YARLGLLLDARNVFETV 115
Query: 64 PLRTVSS---WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLF 120
L +S WN+++ G Y+ AL L M + + + +L +C G
Sbjct: 116 SLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFG 175
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYV 180
L + H+ +++ G L++ HV+ L L+ Y
Sbjct: 176 LCRAFHTQVIQIG------------------------------LKENLHVVNEL-LTLYP 204
Query: 181 QRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
+ MG+A +LF +MPVR+ ++W +I G+++ D CE A+ +F M+R E P+E T
Sbjct: 205 KAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD-CESAVKIFEWMQREEFKPDEVTWT 263
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG-ALAEFY---CDRDAIDDAKRVYES 296
V+ ++ G L G N++ G ALA F+ + +A+ A++V+
Sbjct: 264 SVLSCHSQCGKFEDVLKYFHLMRMSG----NAVSGEALAVFFSVCAELEALSIAEKVH-- 317
Query: 297 MGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL 356
G ++ G G E P S N +I Y +++ ++ L
Sbjct: 318 ---------------GYVIKG----------GFEEYLP-SRNALIHVYGKQGKVKDAEHL 351
Query: 357 FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG-------ERNSVTWNSMMSGYIH 409
F ++ K + S N++I+ + G+LDEA+ LF + + + N VTW S++ G
Sbjct: 352 FRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNV 411
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
G+ ++L+ + M+ V + T + C L + G+ +H H+ +T N+ V
Sbjct: 412 QGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILV 471
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
ALV+ Y+KCG L++ F +I ++ +W ++I GY HG +++ +F M+ G
Sbjct: 472 QNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGF 531
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
P+ VA+LSACSHAGL+ G EIF+SM + + P EHY C+VDLLGR G LKEA
Sbjct: 532 HPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEAS 591
Query: 590 EFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILG 649
E + MP+E + GALLN+ K++++ E A +L L+P +++LSN+Y+ G
Sbjct: 592 EIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGG 651
Query: 650 RWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTA 706
RW + +R + +L+K G SWIE+ + FS + + IY ++ L +
Sbjct: 652 RWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVS 708
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 293/563 (52%), Gaps = 45/563 (7%)
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+H+L + ++ Y ++ ++ A LF +MP RDVVAWT +I+GYA RA + F M
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNA-RAWECFHEM 102
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ PNEFTL V++ C + L G +VHG+ +K G++ + A+ Y
Sbjct: 103 VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 288 DDAKRVYESMGGEACL-----NVANSL---------------IGGLILMGR--IEEAELI 325
+A ACL V N + IGGL + + +E AE+
Sbjct: 163 MEA----------ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVT 212
Query: 326 FYGLRETNPISYNLMIKGYAMSSQIEKS--KRLFEKMAPKNLTSLNTMISVYSKNGELDE 383
Y + T + + I QI S KR F+ NL +N+++ +Y + G L E
Sbjct: 213 PYCI--TIAVRASASIDSVTTGKQIHASVIKRGFQS----NLPVMNSILDLYCRCGYLSE 266
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
A F + + +++ +TWN+++S + SEAL ++ + TF+ L AC
Sbjct: 267 AKHYFHEME-DKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACA 324
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP-NVAAWT 502
++ + GQ LH + + F NV + AL+D Y+KCG++ D+QR F I N+ +WT
Sbjct: 325 NIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWT 384
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
+++ GY HG G+E++ LF M+ G+ P+ F+A+LSAC HAGL+ GL+ F+ M+
Sbjct: 385 SMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGER 622
Y + P + Y CVVDLLGR+G++ EA E + +MP + D WGA+L A K + R
Sbjct: 445 YGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISR 504
Query: 623 -AAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNI 681
AA K+ L P + +V+LS +YA G+W +RK ++ + +K+ G SWI + N +
Sbjct: 505 LAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQV 564
Query: 682 HMFSVEDKTHAYSDVIYATVDHL 704
F+V DK + +Y+ + L
Sbjct: 565 FSFAVSDKMCPNASSVYSVLGLL 587
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 213/495 (43%), Gaps = 52/495 (10%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
+P H+++TN+ +++ K G + EAR +FDEMP R V +W MI+GY+ A
Sbjct: 40 KPKKHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC 98
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
M + NE + S+VL SC L G VH +++K G E V +A++
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 151 CCGIGEAE-LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
C EA L+F +++ N V W TTLI+G
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTW-------------------------------TTLITG 187
Query: 210 YARREDGCERALDLFRCM--RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGL 267
+ DG L +++ M +EV P + + +R A + ++ GK +H IK G
Sbjct: 188 FTHLGDGIG-GLKMYKQMLLENAEVTP--YCITIAVRASASIDSVTTGKQIHASVIKRGF 244
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG---------GLILMGR 318
+ + ++ + YC + +AK + M + L N+LI L++ R
Sbjct: 245 QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD-LITWNTLISELERSDSSEALLMFQR 303
Query: 319 IEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKN 378
E + T+ ++ I Q+ R+F + KN+ N +I +Y+K
Sbjct: 304 FESQGFVPNCYTFTSLVAACANIAALNCGQQLH--GRIFRRGFNKNVELANALIDMYAKC 361
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL 438
G + ++ ++F + RN V+W SMM GY +G +EA++L+ M + R F +
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 439 FRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSP 496
AC ++G + + S+ + + +VD + G + +A + F P
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 497 NVAAWTALINGYAYH 511
+ + W A++ H
Sbjct: 482 DESTWGAILGACKAH 496
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 312/637 (48%), Gaps = 45/637 (7%)
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
N + S+ + +EA M ++ V ++ S+ + +C SL G+ +H + +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-R 110
Query: 132 SGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
G E S LL CV L Y + + +A L
Sbjct: 111 MGIEN----PSVLLQNCV--------------------------LQMYCECRSLEDADKL 140
Query: 192 FGKMPVRDVVAWTTLISGYARREDGC-ERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
F +M + V+ TT+IS YA E G ++A+ LF M S P +++
Sbjct: 141 FDEMSELNAVSRTTMISAYA--EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPR 198
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
AL G+ +H I+ GL + SI + Y + AKRV++ M + + L+
Sbjct: 199 ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV-ACTGLM 257
Query: 311 GGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT 366
G GR +A +F L E + +++++K A ++ K++ +A L
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 367 SL----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
S ++ Y K + A + F + + E N V+W++++SGY Q EA+K + +
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 423 MRRLSVDHSRS-TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
+R + S T++ +F+AC+ L G +HA K + Y +AL+ YSKCG
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
L DA F S+ +P++ AWTA I+G+AY+G SE++ LF M+ G+ PN+ TF+A+L+
Sbjct: 437 CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
ACSHAGL+ G +M Y V PTI+HY C++D+ RSG L EA +F+ MP E D
Sbjct: 497 ACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDA 556
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRL 661
+ W L+ W K++E+GE A E+L LDP +G+V+ N+Y G+W + + K +
Sbjct: 557 MSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLM 616
Query: 662 QSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
L+K+ CSWI+ IH F V DK H + IY
Sbjct: 617 NERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIY 653
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 217/489 (44%), Gaps = 45/489 (9%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF 93
+P V+ N + + L +A +FDEM S TMIS Y++ G D+A+ L S
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSG 174
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
M S K ++ +L S +L G+Q+H+ ++++G + + ++ V+C
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
+ A+ VF+++ V + ++ GY Q +A+ LF + V + V W
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEW---------- 283
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
+ F V++ CA L L+ GK +H K GL+ + S+
Sbjct: 284 ---------------------DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN 333
G L +FY + + A R ++ + ++ + ++I G M + EEA F LR N
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWS-AIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 334 P-----ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL----NTMISVYSKNGELDEA 384
+Y + + ++ + ++ ++L + +I++YSK G LD+A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 385 VKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
++F+ + V W + +SG+ + G SEAL+L+ M + + TF + AC+
Sbjct: 442 NEVFESMDNP-DIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSH 500
Query: 445 LCSFQQGQ-LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWT 502
+QG+ L L K + ++D Y++ G L +A + ++ F P+ +W
Sbjct: 501 AGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWK 560
Query: 503 ALINGYAYH 511
++G H
Sbjct: 561 CFLSGCWTH 569
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 279/527 (52%), Gaps = 18/527 (3%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A +F +P + W +I GY+R + + AL ++ M+ + V P+ FT +++ C+
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSR-NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG-GEACLNVA 306
L L G+ VH + G D D + L Y + A+ V+E + E +
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 307 NSLIGGLILMGRIEEAELIFYGLRETNP----ISYNLMIKGYAMSSQIEKSKRLFE---- 358
+++ G EA IF +R+ + ++ ++ + +++ + +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 359 ---KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE 415
++ P L SLNTM Y+K G++ A LFDK K N + WN+M+SGY NG E
Sbjct: 251 MGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSP-NLILWNAMISGYAKNGYARE 306
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
A+ ++ M V + + AC + S +Q + ++ ++ ++ ++ +V++ +AL+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
++KCG + A+ F +V W+A+I GY HG E+I L+R+M GV PN T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 536 FVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
F+ +L AC+H+G++ +G F+ M +++ P +HY CV+DLLGR+G L +A E I M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 596 PIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKT 655
P++ +WGALL+A + +E+GE AA++LFS+DP+ +V LSN+YA W +
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 656 TIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVD 702
+R R++ L KD GCSW+E+ + F V DK+H + I V+
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 213/470 (45%), Gaps = 41/470 (8%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G++ AR +FD++P + WN +I GYS+ + +AL + S M + V + +F +L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
+C+ L +G+ VH+ + + GF+ V + L+ +C +G A VFE L
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL------ 180
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
+P R +V+WT ++S YA+ + E AL++F MR+
Sbjct: 181 -----------------------PLPERTIVSWTAIVSAYAQNGEPME-ALEIFSQMRKM 216
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+V P+ L V+ L L G+ +H +K GL+ + + +L Y + A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMIKGYAM 346
K +++ M L + N++I G G EA +F+ + ++ P IS I A
Sbjct: 277 KILFDKMKSPN-LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 347 SSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNS 402
+E+++ ++E + + + +I +++K G ++ A +FD+T +R+ V W++
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSA 394
Query: 403 MMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP 462
M+ GY +G+ EA+ LY M R V + TF L AC ++G ++
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK 454
Query: 463 FQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
++D + GHL A + P V W AL++ H
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 48/320 (15%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G++A A+ +FD+M + WN MISGY++ G EA+ + M V+ + IS +
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+ +S+CA+ GSL + ++ + +S + + SAL+ +C + A LVF+ D
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ V+WS M+ GY + G AR A+ L+R M
Sbjct: 388 DVVVWSAMIVGYG--------------------------LHGRAR------EAISLYRAM 415
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA- 286
R V PN+ T ++ C H+G V G + + D+ I + C D
Sbjct: 416 ERGGVHPNDVTFLGLLMACN-----HSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 469
Query: 287 -----IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI 341
+D A V + M + + V +L+ +E E L +P +
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTG--- 526
Query: 342 KGYAMSSQIEKSKRLFEKMA 361
Y S + + RL++++A
Sbjct: 527 -HYVQLSNLYAAARLWDRVA 545
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 47/277 (16%)
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
HS S ++ L + T +Q +HA L Q + ++ T L+ S G + A++
Sbjct: 19 HSDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS----- 544
F + P + W A+I GY+ + +++L++ +M + V P++ TF +L ACS
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 545 ------HAGLLNDGLE------------------------IFHSMQICYRVTPTIEHYTC 574
HA + G + +F + + R TI +T
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER---TIVSWTA 192
Query: 575 VVDLLGRSGRLKEAEEFINQ---MPIEADGVIWGALLNASWFWKDIEVGE--RAAEKLFS 629
+V ++G EA E +Q M ++ D V ++LNA +D++ G A+
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLEL 666
L+ P + L+ MYA G+ + +++S L
Sbjct: 253 LEIEP-DLLISLNTMYAKCGQVATAKILFDKMKSPNL 288
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 189/682 (27%), Positives = 335/682 (49%), Gaps = 58/682 (8%)
Query: 55 EARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCA 114
+AR MF EM R++ WNT++ S+ +++E L S M R K + + L +C
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 115 RSGSLFLGKQVHSLLLKS---GFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVL 171
+ G+ +H + K G + + VGS+L+Y ++C + EA +F+EL
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLY--VGSSLIYMYIKCGRMIEALRMFDELEKP---- 125
Query: 172 WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM-RRS 230
D+V W++++SG+ + +A++ FR M S
Sbjct: 126 ---------------------------DIVTWSSMVSGF-EKNGSPYQAVEFFRRMVMAS 157
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+V P+ TL ++ C +L G+ VHG I+ G D S+ +L Y A +A
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAM 346
+++ M E + +++I + G EA L+F + E N + +++ A
Sbjct: 218 VNLFK-MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 347 SSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNS 402
+ +E+ ++ E K L + ++ +Y K +EA +F + ++ V+W +
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVA 335
Query: 403 MMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR---ACTSLCSFQQGQLLHAHLS 459
++SG+ NG +++ + M L +++R ++ + +C+ L +Q + H+++
Sbjct: 336 LISGFTLNGMAHRSIEEFSIM--LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 393
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
K F +N ++G +LV+ YS+CG L +A + F I + WT+LI GY HG G++++
Sbjct: 394 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453
Query: 520 LFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
F M+ V PN TF++ILSACSHAGL+++GL IF M YR+ P +EHY +VDL
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDL 513
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGF 638
LGR G L A E +MP I G LL A ++ E+ E A+KLF L+ N +
Sbjct: 514 LGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYY 573
Query: 639 VILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
+++SN+Y + G W +R ++ ++K S IE+ +H F +D+ H + +Y
Sbjct: 574 MLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVY 633
Query: 699 ATVD----HLTATINSIIPFNY 716
+ H+ + + + F Y
Sbjct: 634 GLLKELDLHMKEDLENCVYFEY 655
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 155/351 (44%), Gaps = 44/351 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK+ EA ++F + + V SW+T+I+ Y Q G EAL + + M + N +
Sbjct: 209 AKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
VL +CA + L G++ H L ++ G E V +AL+ ++C EA VF +
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ V W ++SG+ M +++ F M L+ R
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIM----------LLENNTR--------------- 363
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
P+ + V+ C+ LG L K H IK G D + IG +L E Y ++
Sbjct: 364 ------PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSL 417
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-----NPISYNLMIK 342
+A +V+ + + + V SLI G + G+ +A F + ++ N +++ ++
Sbjct: 418 GNASKVFNGIALKDTV-VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 476
Query: 343 GYAMSSQIEKSKRLFE------KMAPKNLTSLNTMISVYSKNGELDEAVKL 387
+ + I + R+F+ ++AP NL ++ + + G+LD A+++
Sbjct: 477 ACSHAGLIHEGLRIFKLMVNDYRLAP-NLEHYAVLVDLLGRVGDLDTAIEI 526
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 274/502 (54%), Gaps = 18/502 (3%)
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
++ L+R M RS P+ F+ +++ CA L +G+ +H K G + + + AL
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALIS 96
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVA-NSLIGGLILMGRIEEAELIFYGLRETNPISYN 338
YC + DA++V+E + L+V N+LI G ++ +A +F ++ET +
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 339 LMIKGYAMSSQIEK----SKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDK 390
+ + G + + + L + L S LN+ I++Y K G ++ +LFD+
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
+ +TWN+++SGY NG + L+LY M+ V T + +C L + +
Sbjct: 217 MP-VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
G + + F NV+V A + Y++CG+LA A+ F + ++ +WTA+I Y
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
HG+G ++LF M+ +G+ P+ A FV +LSACSH+GL + GLE+F +M+ Y++ P E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSL 630
HY+C+VDLLGR+GRL EA EFI MP+E DG +WGALL A K++++ E A K+
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455
Query: 631 DPNPISGFVILSNMYA----ILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSV 686
+PN I +V++SN+Y+ G W + +R+R RK PG S++E +H+F
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER----AFRKKPGYSYVEHKGRVHLFLA 511
Query: 687 EDKTHAYSDVIYATVDHLTATI 708
D++H ++ ++ +D L ++
Sbjct: 512 GDRSHEQTEEVHRMLDELETSV 533
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 184/453 (40%), Gaps = 42/453 (9%)
Query: 69 SSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSL 128
+ WN + + + E+++L M RS + SF +L SCA G+Q+H
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 129 LLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNA 188
+ K G E V +AL+ +C + +A VFEE + +
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQL------------------ 120
Query: 189 MDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
V + LISGY + A +FR M+ + V + T+ ++ +C
Sbjct: 121 -----------SVCYNALISGYTANSKVTDAAY-MFRRMKETGVSVDSVTMLGLVPLCTV 168
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANS 308
L G+ +HG C+K GLD + ++ + Y +++ +R+++ M + L N+
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG-LITWNA 227
Query: 309 LIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP------ 362
+I G G + ++ ++ + + S +K++ ++
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 363 --KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
N+ N IS+Y++ G L +A +FD ++ V+W +M+ Y +G L L+
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFD-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSK 479
M + + + F ++ AC+ +G +L A + + + LVD +
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
Query: 480 CGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
G L +A S+ P+ A W AL+ H
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 135/325 (41%), Gaps = 46/325 (14%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N I K G + R +FDEMP++ + +WN +ISGYSQ G + L L M S V
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
+ + +VLSSCA G+ +G +V L+ +GF V +A + RC + +A V
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F+ MPV+ +V+WT +I Y G E
Sbjct: 315 FD-------------------------------IMPVKSLVSWTAMIGCYGMHGMG-EIG 342
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
L LF M + + P+ V+ C+ H+G GL + + + + +
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACS-----HSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 281 YCDRD------AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
C D +D+A ESM E V +L+G + ++ AEL F + E P
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEP 457
Query: 335 IS---YNLMIKGYAMSSQIEKSKRL 356
+ Y LM Y+ S E R+
Sbjct: 458 NNIGYYVLMSNIYSDSKNQEGIWRI 482
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 169/386 (43%), Gaps = 54/386 (13%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS--WNTMISGYSQWGRYDEALALA 91
P V++ IS+ K G +A+AR +F+E P + S +N +ISGY+ + +A +
Sbjct: 87 EPFVLTALISM--YCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
M + V ++ ++ ++ C L+LG+ +H +K G + V ++ + ++C
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
+ +F+E+ + W+ ++SGY Q G A D+
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQN---GLAYDV-------------------- 241
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
L+L+ M+ S V P+ FTL V+ CA LGA G V L +G +
Sbjct: 242 ---------LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 272 SIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG--GLILMGRIEEA---ELIF 326
+ A Y + A+ V++ M ++ ++ ++IG G+ MG I ++I
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIK 351
Query: 327 YGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM--------APKNLTSLNTMISVYSKN 378
G+R + + +++ + S +K LF M P++ + L + + +
Sbjct: 352 RGIRPDGAV-FVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL---VDLLGRA 407
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMM 404
G LDEA++ + E + W +++
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
S WN + + SE++ LY +M R +F + ++C SL GQ LH
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVA----AWTALINGYAYHG 512
H++K + +V TAL+ Y KCG +ADA++ F +P + + ALI+GY +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE--NPQSSQLSVCYNALISGYTANS 135
Query: 513 LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
+++ +FR M GV ++ T + ++ C+ L G + H + + +
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL-HGQCVKGGLDSEVAVL 194
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ + + G ++ ++MP++ + W A+++
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGL-ITWNAVISG 231
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 27 LRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDE 86
L +S P+V +N SI+ A+ G LA+AR +FD MP++++ SW MI Y G +
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 87 ALALASFMHRSCVKLNEISFSAVLSSCARSG 117
L L M + ++ + F VLS+C+ SG
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 185/667 (27%), Positives = 316/667 (47%), Gaps = 80/667 (11%)
Query: 115 RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
R SL L + VH ++ GF+ + + L+ + + A +F+E+ + + + +
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 175 MLSGYVQRDMMGNAMDLFGKMPV--RDVVAWTTLISGYARREDGCERALDLFRCMRRSEV 232
M+SGY + A +F K PV RD V + +I+G++ DG A++LF M+
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS-AINLFCKMKHEGF 144
Query: 233 LPNEFTLDCVIRICARLGALHAGKV-VHGLCIKDGLDFDNSIGGALAEF----------- 280
P+ FT V+ A + V H +K G + S+ AL
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 281 ------------------------YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILM 316
Y D + + E M L N++I G +
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 317 GRIEEA-----ELIFYGLRETNPISY---------------------------------- 337
G +EA ++ G+ E + +Y
Sbjct: 265 GFYQEALEMVRRMVSSGI-ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
N ++ Y + ++++ +FEKM K+L S N ++S Y +G + EA +F + K E+N
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK-EKNI 382
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
++W M+SG NG E LKL+ M+R + FS ++C L ++ GQ HA
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
L K F +++ G AL+ Y+KCG + +A++ F ++ + +W ALI HG G+E+
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ ++ ML +G+ P+ T + +L+ACSHAGL++ G + F SM+ YR+ P +HY ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG 637
LL RSG+ +AE I +P + IW ALL+ ++E+G AA+KLF L P
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 638 FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVI 697
+++LSNM+A G+W + +RK ++ ++K+ CSWIE+ +H F V+D +H ++ +
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 698 YATVDHL 704
Y + L
Sbjct: 683 YIYLQDL 689
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 242/533 (45%), Gaps = 57/533 (10%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMP--LRTVSSWNTMISGYSQWGRYDEAL 88
E P I+ ++ +G++ AR +F++ P +R +N MI+G+S A+
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCAR-SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYF 147
L M K + +F++VL+ A + Q H+ LKSG V +AL+
Sbjct: 134 NLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 148 CVRCCG----IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR-DVVA 202
+C + A VF+E+ + + W+ M++GYV+ +L M +VA
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
+ +ISGY R + AL++ R M S + +EFT VIR CA G L GK VH
Sbjct: 254 YNAMISGYVNR-GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 263 IKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA 322
++ DF +L Y D+A+ ++E M + ++ N+L+ G + G I EA
Sbjct: 313 LRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALLSGYVSSGHIGEA 370
Query: 323 ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLF-----EKMAP--------------- 362
+LIF ++E N +S+ +MI G A + E+ +LF E P
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 363 -------------------KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
+L++ N +I++Y+K G ++EA ++F +T +SV+WN++
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF-RTMPCLDSVSWNAL 489
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS---K 460
++ +G +EA+ +Y M + + R T + AC+ QG+ + +
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
P A+ Y L+D + G +DA+ S+ F P W AL++G HG
Sbjct: 550 IPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 146/358 (40%), Gaps = 79/358 (22%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEA--------------------- 87
K G+ EAR +F++MP + + SWN ++SGY G EA
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 88 ----------LALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
L L S M R + + +FS + SCA G+ G+Q H+ LLK GF+
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
G+AL+ +C + EA VF MP
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFR-------------------------------TMPC 480
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
D V+W LI+ + G E A+D++ M + + P+ TL V+ C+ HAG V
Sbjct: 481 LDSVSWNALIAALGQHGHGAE-AVDVYEEMLKKGIRPDRITLLTVLTACS-----HAGLV 534
Query: 258 VHGLCIKDGLDFDNSI-GGA-----LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG 311
G D ++ I GA L + C DA+ V ES+ + + +L+
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 312 GLILMGRIE----EAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
G + G +E A+ +F GL + +Y L+ +A + Q E+ R+ + M + +
Sbjct: 595 GCRVHGNMELGIIAADKLF-GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGV 651
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/681 (28%), Positives = 344/681 (50%), Gaps = 45/681 (6%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
VI T++ + +TG L++A +FD MP+R + +W+T++S + G +AL + M
Sbjct: 137 VIETSL-LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVD 195
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
V+ + ++ +V+ CA G L + + VH + + F+ + ++LL +C +
Sbjct: 196 DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
+E +FE K+ ++ V+WT +IS Y R E
Sbjct: 256 SERIFE-------------------------------KIAKKNAVSWTAMISSYNRGEFS 284
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD-NSIGG 275
E+AL F M +S + PN TL V+ C +G + GK VHG ++ LD + S+
Sbjct: 285 -EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL 343
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL--RETN 333
AL E Y + + D + V + + NSLI G + +A +F + +
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIV-AWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 334 PISYNLM--IKGYAMSSQIEKSKRLFEKMAPKNLTS---LNTMISVYSKNGELDEAVKLF 388
P ++ L I + + K++ + +++ N++I +YSK+G +D A +F
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
++ K R+ VTWNSM+ G+ NG EA+ L+ M ++ + TF + +AC+S+ S
Sbjct: 463 NQIK-HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
++G+ +H L + + +++ TAL+D Y+KCG L A+ F ++ S ++ +W+++IN Y
Sbjct: 522 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
HG +I F M+ G PN F+ +LSAC H+G + +G F+ M+ + V+P
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFGVSPN 639
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLF 628
EH+ C +DLL RSG LKEA I +MP AD +WG+L+N + +++ + L
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLS 699
Query: 629 SLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVED 688
+ + + +LSN+YA G W + +R ++S L+K PG S IE++ + F +
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGE 759
Query: 689 KTHAYSDVIYATVDHLTATIN 709
+ +D IY + +L N
Sbjct: 760 ENRIQTDEIYRFLGNLQNLTN 780
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 247/563 (43%), Gaps = 49/563 (8%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
I A G +R +F+ P + +I D A+ L + ++++
Sbjct: 41 IESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISK 100
Query: 104 ISFSAVLSSCARSGS-LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
F +VL +CA S L +G +VH ++K G
Sbjct: 101 FVFPSVLRACAGSREHLSVGGKVHGRIIKGGV---------------------------- 132
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERAL 221
D + V+ + +L Y Q + +A +F MPVRD+VAW+TL+S E+G +AL
Sbjct: 133 ---DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL--ENGEVVKAL 187
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
+F+CM V P+ T+ V+ CA LG L + VHG + D D ++ +L Y
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
Query: 282 CDRDAIDDAKRVYESMGGEACLN----VANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
+ ++R++E + + ++ +++ G +E+I G+ E N ++
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI-EPNLVTL 306
Query: 338 NLMIKGYAMSSQIEKSKRL----FEKMAPKNLTSLN-TMISVYSKNGELDEAVKLFDKTK 392
++ + I + K + + N SL+ ++ +Y++ G+L + + +
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL-RVV 365
Query: 393 GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQ 452
+RN V WNS++S Y H G +AL L+ M + T + AC + G+
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 453 LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHG 512
+H H+ +T ++ +V +L+D YSK G + A F I +V W +++ G++ +G
Sbjct: 426 QIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG 484
Query: 513 LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
E+I LF M + N TF+A++ ACS G L G + H + I +
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG--LKDLFTD 542
Query: 573 TCVVDLLGRSGRLKEAEEFINQM 595
T ++D+ + G L AE M
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAM 565
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 51/381 (13%)
Query: 34 HPHVISTNIS--------IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYD 85
H HVI T++S I +K+G + A +F+++ R+V +WN+M+ G+SQ G
Sbjct: 428 HGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSV 487
Query: 86 EALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALL 145
EA++L +M+ S +++NE++F AV+ +C+ GSL GK VH L+ SG + +AL+
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDTALI 546
Query: 146 YFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTT 205
+C + AE VF + + V WS M++ Y +G+A+ F +M
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV--------- 597
Query: 206 LISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD 265
E G + PNE V+ C G++ GK L
Sbjct: 598 --------ESGTK---------------PNEVVFMNVLSACGHSGSVEEGKYYFNLMKSF 634
Query: 266 GLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELI 325
G+ ++ + + +A R + M A +V SL+ G + +++ + I
Sbjct: 635 GVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAI 694
Query: 326 FYGLRET---NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELD 382
L + + Y L+ YA + E+ +RL M NL + ++ E+D
Sbjct: 695 KNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI-----EID 749
Query: 383 EAVKLFDKTKGERNSVTWNSM 403
+ K+F GE N + + +
Sbjct: 750 Q--KVFRFGAGEENRIQTDEI 768
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 138/330 (41%), Gaps = 47/330 (14%)
Query: 322 AELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGEL 381
A L+ G +P+ +I+ YA + S+ +FE + +I L
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLL 81
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
D A+ L+ + E + S+ F + RA
Sbjct: 82 DAAIDLYHRLVSETTQI--------------------------------SKFVFPSVLRA 109
Query: 442 CT-SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA 500
C S G +H + K + + T+L+ Y + G+L+DA++ F + ++ A
Sbjct: 110 CAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVA 169
Query: 501 WTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
W+ L++ +G +++ +F+ M+ GV P+A T ++++ C+ G L + +
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 561 ICYRVTPTIEHYTC--VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIE 618
R ++ C ++ + + G L +E ++ + + V W A++++ + E
Sbjct: 230 ---RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISS---YNRGE 282
Query: 619 VGERA----AEKLFS-LDPNPISGFVILSN 643
E+A +E + S ++PN ++ + +LS+
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/650 (28%), Positives = 320/650 (49%), Gaps = 66/650 (10%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
K G L +A +FDE+P R +WN ++ GY Q G+ +EA+ L S M + V+ ++ S
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
LS+ A G + GKQ H++ + +G E ++G++LL F + I AE+VF+
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD----- 333
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+M +DVV W +ISGY + + E A+ + + M
Sbjct: 334 --------------------------RMFEKDVVTWNLIISGYVQ-QGLVEDAIYMCQLM 366
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R ++ + TL ++ AR L GK V CI+ + D + + + Y +I
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMS 347
DAK+V++S E L + N+L+ G EA +FYG+
Sbjct: 427 VDAKKVFDSTV-EKDLILWNTLLAAYAESGLSGEALRLFYGM------------------ 467
Query: 348 SQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE---RNSVTWNSMM 404
Q+E P N+ + N +I +NG++DEA +F + + N ++W +MM
Sbjct: 468 -QLEG--------VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
+G + NG EA+ M+ + + + +V AC L S G+ +H ++ +
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 465 AN-VYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
++ V + T+LVD Y+KCG + A++ F S + A+I+ YA +G E+I L+RS
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSG 583
+ G+ P+ T +LSAC+HAG +N +EIF + + P +EHY +VDLL +G
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSN 643
++A I +MP + D + +L+ + + E+ + + KL +P +V +SN
Sbjct: 699 ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 644 MYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELN--NNIHMFSVEDKTH 691
YA+ G W + +R+ +++ L+K PGCSWI++ +H+F DKTH
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTH 808
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/551 (24%), Positives = 263/551 (47%), Gaps = 47/551 (8%)
Query: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCAR 115
++H ++ + +S+ +S + G EAL+L + M +++ + +L C
Sbjct: 23 SKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVY 82
Query: 116 SGSLFLGKQVHSLLLKSG--FEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWS 173
L GKQ+H+ +LK+G + + + + L+ F +C + AE++F +LR
Sbjct: 83 ERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR-------- 134
Query: 174 LMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVL 233
VR+V +W +I G R CE AL F M +E+
Sbjct: 135 -----------------------VRNVFSWAAII-GVKCRIGLCEGALMGFVEMLENEIF 170
Query: 234 PNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRV 293
P+ F + V + C L G+ VHG +K GL+ + +LA+ Y +DDA +V
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 294 YESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQ 349
++ + + N+L+ G + G+ EEA +F +R E ++ + + A
Sbjct: 231 FDEIPDRNAV-AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 350 IEKSKR-----LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+E+ K+ + M N+ ++++ Y K G ++ A +FD+ E++ VTWN ++
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLII 347
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
SGY+ G +A+ + MR + + T + L A + + G+ + + + F+
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 465 ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM 524
+++ + + ++D Y+KCG + DA++ F S ++ W L+ YA GL E++ LF M
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 525 LVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGR 584
++GV PN T+ I+ + G +++ ++F MQ + P + +T +++ + ++G
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ-SSGIIPNLISWTTMMNGMVQNGC 526
Query: 585 LKEAEEFINQM 595
+EA F+ +M
Sbjct: 527 SEEAILFLRKM 537
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 185/384 (48%), Gaps = 24/384 (6%)
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDF---DNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+++ C L GK +H +K+G DF + I L FY DA++ A+ ++ +
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNG-DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR 134
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
+ A ++IG +G E A + F + E N ++ + K R
Sbjct: 135 VRNVFSWA-AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 359 KMAPKNLTS--------LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN 410
+ + S +++ +Y K G LD+A K+FD+ +RN+V WN++M GY+ N
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQN 252
Query: 411 GQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG 470
G++ EA++L+ MR+ V+ +R T S A ++ ++G+ HA + + +G
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 471 TALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL 530
T+L++FY K G + A+ F +F +V W +I+GY GL ++I + + M ++ +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH----YTCVVDLLGRSGRLK 586
+ T ++SA + L G E+ CY + + E + V+D+ + G +
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQ-----CYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 587 EAEEFINQMPIEADGVIWGALLNA 610
+A++ + +E D ++W LL A
Sbjct: 428 DAKKVFDS-TVEKDLILWNTLLAA 450
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 55/363 (15%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMP----LRTVSSWNT 73
E RLF + + P P+VI+ N+ I + G++ EA+ MF +M + + SW T
Sbjct: 459 EALRLFYGMQLEGVP--PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
M++G Q G +EA+ M S ++ N S + LS+CA SL +G+ +H ++++
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN- 575
Query: 134 FEKFGLVG--SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
+ LV ++L+ +C I +AE VF L
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVF--------------------------GSKL 609
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGA 251
+ ++P+ + +IS YA + + A+ L+R + + P+ T+ V+ C
Sbjct: 610 YSELPLSN-----AMISAYALYGN-LKEAIALYRSLEGVGLKPDNITITNVLSACN---- 659
Query: 252 LHAGKVVHGLCIKDGLDFDNSIG------GALAEFYCDRDAIDDAKRVYESMGGEACLNV 305
HAG + + I + S+ G + + + A R+ E M + +
Sbjct: 660 -HAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARM 718
Query: 306 ANSLIGGLILMGRIEEAELIFYGLRETNPI---SYNLMIKGYAMSSQIEKSKRLFEKMAP 362
SL+ + E + + L E+ P +Y + YA+ ++ ++ E M
Sbjct: 719 IQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 363 KNL 365
K L
Sbjct: 779 KGL 781
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 386 KLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
K D+ +S ++ +S NG+ EAL L M ++ + + + C
Sbjct: 24 KHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYE 83
Query: 446 CSFQQGQLLHAHLSKTP--FQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA 503
G+ +HA + K + N Y+ T LV FY+KC L A+ F+ + NV +W A
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC-----SHAGLLNDGLEIFHS 558
+I GL +++ F ML + P+ + AC S G G +
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 559 MQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
++ C V ++ D+ G+ G L +A + +++P + + V W AL+
Sbjct: 204 LEDCVFVASSL------ADMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 177/587 (30%), Positives = 292/587 (49%), Gaps = 40/587 (6%)
Query: 131 KSGFEKFGLVGSAL-LYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAM 189
KS E L+G L Y +R + ++ E+LR N L ++ Y + +A
Sbjct: 36 KSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLR-CNSSLGVKLMRAYASLKDVASAR 94
Query: 190 DLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARL 249
+F ++P R+V+ +I Y E + +F M V P+ +T CV++ C+
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGE-GVKVFGTMCGCNVRPDHYTFPCVLKACSCS 153
Query: 250 GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
G + G+ +HG K GL + L V N L
Sbjct: 154 GTIVIGRKIHGSATKVGL--------------------------------SSTLFVGNGL 181
Query: 310 IGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL---- 365
+ G + EA L+ + + +S+N ++ GYA + + + + + +M +
Sbjct: 182 VSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDA 241
Query: 366 -TSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
T + + +V + E VK G+++ V+WN M+ Y+ N EA++LY M
Sbjct: 242 GTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME 301
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
+ + + + AC + G+ +H ++ + N+ + AL+D Y+KCG L
Sbjct: 302 ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE 361
Query: 485 DAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS 544
A+ F ++ S +V +WTA+I+ Y + G G +++ LF + G++P++ FV L+ACS
Sbjct: 362 KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACS 421
Query: 545 HAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIW 604
HAGLL +G F M Y++TP +EH C+VDLLGR+G++KEA FI M +E + +W
Sbjct: 422 HAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVW 481
Query: 605 GALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSL 664
GALL A D ++G AA+KLF L P +V+LSN+YA GRW + T IR ++S
Sbjct: 482 GALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Query: 665 ELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
L+K+PG S +E+N IH F V D++H SD IY +D L + +
Sbjct: 542 GLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 175/404 (43%), Gaps = 50/404 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A ++A AR +FDE+P R V N MI Y G Y E + + M V+ + +F
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
VL +C+ SG++ +G+++H K G VG+ L+ +C + EA LV +E+
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 168 NHVLWSLMLSGYVQRDMMGNAM-------------------------------------D 190
+ V W+ ++ GY Q +A+ D
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+F KM + +V+W +I Y + E A++L+ M P+ ++ V+ C
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVE-AVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
AL GK +HG + L + + AL + Y ++ A+ V+E+M ++ ++I
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMI 382
Query: 311 GGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFE------KM 360
GR +A +F L+++ + I++ + + + +E+ + F+ K+
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 361 APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
P+ L L M+ + + G++ EA + E N W +++
Sbjct: 443 TPR-LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 6 RFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPL 65
RF C+ +E ++ H +++ + T + + MF +M
Sbjct: 221 RFDDALEVCREMESVKI---------SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
+++ SWN MI Y + EA+ L S M + + +S ++VL +C + +L LGK++
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMM 185
H + + L+ +AL+ +C + +A VFE ++ + V W+ M+S Y
Sbjct: 332 HGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Query: 186 GNAMDLFGKMP----VRDVVAWTTLISGYARREDGCERALDLFRCMR-RSEVLPNEFTLD 240
+A+ LF K+ V D +A+ T ++ + E F+ M ++ P L
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACS-HAGLLEEGRSCFKLMTDHYKITPRLEHLA 450
Query: 241 CVIRICARLGAL 252
C++ + R G +
Sbjct: 451 CMVDLLGRAGKV 462
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 201/648 (31%), Positives = 318/648 (49%), Gaps = 47/648 (7%)
Query: 49 KTGELAEARHMFDEMPLRT-VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
K G +A +F E+ ++ V WN MI G+ G + +L L + VKL SF+
Sbjct: 217 KFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT 276
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
L +C++S + G+Q+H ++K G V ++LL +C +GEAE VF + D
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+W+ M++ Y + D GY+ ALDLF M
Sbjct: 337 RLEIWNAMVAAYAENDY------------------------GYS--------ALDLFGFM 364
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R+ VLP+ FTL VI C+ LG + GK VH K + ++I AL Y
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN----PISYNLMIKG 343
DA V++SM E + SLI GL G+ +EA +F +++ + P S ++M
Sbjct: 425 PDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS-DIMTSV 482
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSL-------NTMISVYSKNGELDEAVKLFDKTKGERN 396
+ +E + + T L +++I +YSK G + A+K+F E N
Sbjct: 483 TNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-N 541
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
V WNSM+S Y N ++ L+ M + + + + A +S S +G+ LH
Sbjct: 542 MVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 601
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
+ + ++ ++ AL+D Y KCG A+ F + ++ W +I GY HG
Sbjct: 602 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
++ LF M G P+ TF++++SAC+H+G + +G IF M+ Y + P +EHY +V
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPIS 636
DLLGR+G L+EA FI MPIEAD IW LL+AS ++E+G +AEKL ++P S
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGS 781
Query: 637 GFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMF 684
+V L N+Y G + + ++ L K PGCSWIE+++ ++F
Sbjct: 782 TYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVF 829
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 253/569 (44%), Gaps = 59/569 (10%)
Query: 49 KTGELAEARHMFDE-------MPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKL 101
K G L A +FD + R V+ WN+MI GY ++ R+ E + M V+
Sbjct: 107 KCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRP 166
Query: 102 NEISFSAVLSSCARSGSLFL--GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+ S S V+S + G+ GKQ+H +L++ + + +AL+ + +A
Sbjct: 167 DAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWR 226
Query: 160 VFEELRD-GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE 218
VF E+ D N VLW++M+ G FG + CE
Sbjct: 227 VFVEIEDKSNVVLWNVMIVG-------------FGGSGI-------------------CE 254
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
+LDL+ + + V + + C++ G+ +H +K GL D + +L
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIG----------GLILMGRIEEAELIFYG 328
Y + +A+ V+ + + L + N+++ L L G + + ++
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKR-LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLF 388
+N IS ++ Y + LF++ T + ++++YSK G +A +F
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVH--AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR--RLSVDHSRSTFSVLFRACTSLC 446
K+ E++ V W S++SG NG+ EALK++ M+ S+ + + AC L
Sbjct: 432 -KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 447 SFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALIN 506
+ + G +H + KT NV+VG++L+D YSKCG A + FTS+ + N+ AW ++I+
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 507 GYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVT 566
Y+ + L SI LF ML QG+ P++ + ++L A S L G + H + +
Sbjct: 551 CYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIP 609
Query: 567 PTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
++D+ + G K AE +M
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 253/555 (45%), Gaps = 43/555 (7%)
Query: 69 SSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEI-SFSAVLSSCARSGSLFLGKQVHS 127
+S N+ I Q G Y +AL L S S + +F ++L +C+ +L GK +H
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 128 LLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGN 187
++ G+ + ++L+ V+C + A VF DG WS SG
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF----DG----WSQSQSG--------- 127
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
+ RDV W ++I GY + + + FR M V P+ F+L V+ +
Sbjct: 128 -------VSARDVTVWNSMIDGYFKFRR-FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 248 RLGAL--HAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNV 305
+ G GK +HG +++ LD D+ + AL + Y DA RV+ + ++ + +
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 306 ANSLIGGLILMGRIEEAELIFYGLRETNPI-----SYNLMIKGYAMSSQIEKSKRL---F 357
N +I G G I E+ L Y L + N + S+ + + S +++
Sbjct: 240 WNVMIVGFGGSG-ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 358 EKMAPKNLTSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEA 416
KM N + T ++S+YSK G + EA +F +R + WN+M++ Y N A
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI-WNAMVAAYAENDYGYSA 357
Query: 417 LKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
L L+ MR+ SV T S + C+ L + G+ +HA L K P Q+ + +AL+
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 477 YSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSML--VQGVLPNAA 534
YSKCG DA F S+ ++ AW +LI+G +G E++ +F M + P++
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 535 TFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQ 594
++ +AC+ L GL++ SM I + + + ++DL + G + A +
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 595 MPIEADGVIWGALLN 609
M E + V W ++++
Sbjct: 537 MSTE-NMVAWNSMIS 550
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/539 (23%), Positives = 225/539 (41%), Gaps = 47/539 (8%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
+ P+V ++ +S+ +K G + EA +F + + + WN M++ Y++ AL L
Sbjct: 305 NDPYVCTSLLSM--YSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
FM + V + + S V+S C+ G GK VH+ L K + + SALL +C
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
+A LVF+ + + + V W ++SG + A+ +FG M D
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD------------- 469
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
+ P+ + V CA L AL G VHG IK GL +
Sbjct: 470 -----------------DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET 332
+G +L + Y + A +V+ SM E + NS+I + E + + L +
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMV-AWNSMI-SCYSRNNLPELSIDLFNLMLS 570
Query: 333 -----NPISYNLMIKGYAMSSQIEKSKRL----FEKMAPKNLTSLNTMISVYSKNGELDE 383
+ +S ++ + ++ + K K L P + N +I +Y K G
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
A +F K + ++ +TWN M+ GY +G AL L+ M++ TF L AC
Sbjct: 631 AENIFKKMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 444 SLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAW 501
++G+ + + + + N+ +VD + G L +A ++ + + W
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 502 TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
L++ H E +L L++ +T+V +++ AGL N+ ++ M+
Sbjct: 750 LCLLSASRTHH-NVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 318/661 (48%), Gaps = 50/661 (7%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH--RSCVKLNEISFSA 108
G L AR +FD+MP + SW ++I Y DEAL L S M V + S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
VL +C +S ++ G+ +H+ +K+ VGS+LL R I ++ VF E
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE----- 168
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY---ARREDGCERALDLFR 225
MP R+ V WT +I+G R ++G L F
Sbjct: 169 --------------------------MPFRNAVTWTAIITGLVHAGRYKEG----LTYFS 198
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
M RSE L + +T ++ CA L + GK +H I G + +LA Y +
Sbjct: 199 EMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG 258
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMI 341
+ D ++E+M ++ SLI +G+ +A F +R + N ++ M
Sbjct: 259 EMQDGLCLFENMSERDVVS-WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMF 317
Query: 342 KGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
A S++ ++L + +L+ N+M+ +YS G L A LF + R+
Sbjct: 318 SACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC-RDI 376
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
++W++++ GY G E K + MR+ + + L ++ + G+ +HA
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHAL 436
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
+ N V ++L++ YSKCG + +A F ++ + TA+INGYA HG E+
Sbjct: 437 ALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEA 496
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
I LF L G P++ TF+++L+AC+H+G L+ G F+ MQ Y + P EHY C+VD
Sbjct: 497 IDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVD 556
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG 637
LL R+GRL +AE+ IN+M + D V+W LL A DIE G RAAE++ LDP +
Sbjct: 557 LLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATA 616
Query: 638 FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVI 697
V L+N+Y+ G + +RK +++ + K+PG S I++ + + F D+ H S+ I
Sbjct: 617 LVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDI 676
Query: 698 Y 698
Y
Sbjct: 677 Y 677
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 212/473 (44%), Gaps = 56/473 (11%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
+ G++ ++ +F EMP R +W +I+G GRY E L S M RS + +F+
Sbjct: 155 RVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAI 214
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
L +CA + GK +H+ ++ GF V ++L C E++DG
Sbjct: 215 ALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC----------GEMQDG- 263
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE-RALDLFRCM 227
+ LF M RDVV+WT+LI Y R G E +A++ F M
Sbjct: 264 --------------------LCLFENMSERDVVSWTSLIVAYKRI--GQEVKAVETFIKM 301
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R S+V PNE T + CA L L G+ +H + GL+ S+ ++ + Y +
Sbjct: 302 RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNL 361
Query: 288 DDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAELIFYGLRE--TNPISYNLM-IK 342
A +++ M C ++ +++IGG G EE F +R+ T P + L +
Sbjct: 362 VSASVLFQGM---RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 343 GYAMSSQIEKSKRLFEKMA-----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
+ + + + R +A +N T +++I++YSK G + EA +F +T + +
Sbjct: 419 SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD-DI 477
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG----QL 453
V+ +M++GY +G+ EA+ L+ ++ TF + ACT G +
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALI 505
+ + P A + G +VD + G L+DA++ + + + WT L+
Sbjct: 538 MQETYNMRP--AKEHYG-CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 192/679 (28%), Positives = 335/679 (49%), Gaps = 49/679 (7%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDE-ALALASFMHRS 97
+ N I+ + G L +AR +FD+MP R V S+N + S YS+ + A L + M
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
VK N +F++++ CA + +G ++S ++K G+ +V +++L C + A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
+F+ + + RD VAW T+I G + + D
Sbjct: 254 RRIFDCVNN-------------------------------RDAVAWNTMIVG-SLKNDKI 281
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
E L FR M S V P +FT V+ C++LG+ GK++H I D + AL
Sbjct: 282 EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNAL 341
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
+ YC + +A V+ + ++ NS+I G G E+A L++ L +
Sbjct: 342 LDMYCSCGDMREAFYVFGRIHNPNLVS-WNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL---------NTMISVYSKNGELDEAVKLF 388
+ A+S+ E + + K+ +T L T++S+Y KN E + A K+F
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
D K ER+ V W M+ G+ G A++ ++ M R + S + AC+ +
Sbjct: 461 DVMK-ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
+QG++ H +T F + V ALVD Y K G A+ F+ +P++ W +++ Y
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAY 579
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
+ HG+ +++ F +L G +P+A T++++L+ACSH G G +++ M+ +
Sbjct: 580 SQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAG 638
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPI-EADGVIWGALLNASWFWKDIEVGERAAEKL 627
+HY+C+V+L+ ++G + EA E I Q P +W LL+A +++++G AAE++
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQI 698
Query: 628 FSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIEL-NNNIHMFSV 686
LDP + ++LSN+YA+ GRW +R++++ L KDPG SWIE+ NNN +FS
Sbjct: 699 LKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSS 758
Query: 687 EDKTHAYSDVIYATVDHLT 705
D+++ +V+ D L
Sbjct: 759 GDQSNP--EVVSQAQDELN 775
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/599 (24%), Positives = 269/599 (44%), Gaps = 53/599 (8%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWN--TMISGYSQWGR--Y 84
D+ +P+ + IS+ R + L +AR +FD+MP R + + + + Y G +
Sbjct: 16 DAAAEYPYANNNLISMYVRCSS--LEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLH 73
Query: 85 DEALALASFMHRSCVKLNEISFSAV--LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGS 142
+ + L SF + LNEI+ S V C L +Q+H+L+L +G G+
Sbjct: 74 SQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAG------AGA 127
Query: 143 ALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA 202
A E N+ ++S YV+ + A +F KMP R+VV+
Sbjct: 128 AT-----------------ESPYANNN-----LISMYVRCGSLEQARKVFDKMPHRNVVS 165
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
+ L S Y+R D A L M V PN T ++++CA L + G ++
Sbjct: 166 YNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI 225
Query: 263 IKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA 322
IK G + + ++ Y ++ A+R+++ + + N++I G + +IE+
Sbjct: 226 IKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAV-AWNTMIVGSLKNDKIEDG 284
Query: 323 ELIFYGLR----ETNPISYNLMIKG------YAMSSQIEKSKRLFEKMAPKNLTSLNTMI 372
+ F + + +Y++++ G Y++ I + + +A +L N ++
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA--DLPLDNALL 342
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSR 432
+Y G++ EA +F + N V+WNS++SG NG +A+ +Y + R+S
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNP-NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 433 S-TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
TFS A F G+LLH ++K ++ +V+VGT L+ Y K AQ+ F
Sbjct: 402 EYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFD 461
Query: 492 SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
+ +V WT +I G++ G ++ F M + + + +++ ACS +L
Sbjct: 462 VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
G E+FH + I + +VD+ G++G+ + AE I + D W ++L A
Sbjct: 522 G-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSLASNPDLKCWNSMLGA 578
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 193/464 (41%), Gaps = 54/464 (11%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V+ T++ + + G+L AR +FD + R +WNTMI G + + ++ L M
Sbjct: 235 VVQTSV-LGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLM 293
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
S V + ++S VL+ C++ GS LGK +H+ ++ S + +ALL C + E
Sbjct: 294 SGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMRE 353
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A VF + + N +V+W ++ISG + G
Sbjct: 354 AFYVFGRIHNPN-------------------------------LVSWNSIISGCSENGFG 382
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+ L R +R S P+E+T I A GK++HG K G + +G
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL-RETNPI 335
L Y + A++V++ M E + + +I G +G E A F + RE N
Sbjct: 443 LLSMYFKNREAESAQKVFDVM-KERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-- 499
Query: 336 SYNLMIKGYAMSSQIE--------KSKRLFEKMAPKN-----LTSLNTMISVYSKNGELD 382
G+++SS I + +F +A + ++ ++ +Y KNG+ +
Sbjct: 500 ----RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYE 555
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
A +F + WNSM+ Y +G +AL + + T+ L AC
Sbjct: 556 TAETIFSLASNP-DLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC 614
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+ S QG+ L + + +A + +V+ SK G + +A
Sbjct: 615 SHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEA 658
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 20/307 (6%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWN--SMMSGYIHNGQ--HSEALKL--YVT 422
N +IS+Y + L++A K+FDK +RN VT S + Y+ G HS+ +KL +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMP-QRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQA---NVYVGTALVDFYSK 479
+ + ++ S+ L R C S+ ++ + +HA + A + Y L+ Y +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYH-GLGSESILLFRSMLVQGVLPNAATFVA 538
CG L A++ F + NV ++ AL + Y+ + S + L M + V PN++TF +
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 539 ILSACSHAGLLNDGL--EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
++ C+ +L D L +S I + + T V+ + G L+ A + +
Sbjct: 205 LVQVCA---VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 597 IEADGVIWGALLNASWFWKDIEVGERAAEKLF--SLDPNPISGFVILSNMYAILGRWGQK 654
D V W ++ S IE G + +DP + ++L N + LG +
Sbjct: 262 -NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL-NGCSKLGSYSLG 319
Query: 655 TTIRKRL 661
I R+
Sbjct: 320 KLIHARI 326
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 236/376 (62%), Gaps = 7/376 (1%)
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
M++ Y S ++ +K++F++M ++ + MI+ YS+ G + EA++LF K +++V
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKI-KDTVC 222
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
W +M+ G + N + ++AL+L+ M+ +V + T + AC+ L + + G+ +H+ +
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 282
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
+ + +VG AL++ YS+CG + +A+R F + +V ++ +I+G A HG E+I
Sbjct: 283 NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAIN 342
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
FR M+ +G PN T VA+L+ACSH GLL+ GLE+F+SM+ + V P IEHY C+VDLL
Sbjct: 343 EFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLL 402
Query: 580 GRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG-F 638
GR GRL+EA FI +PIE D ++ G LL+A ++E+GE+ A++LF + NP SG +
Sbjct: 403 GRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE-NPDSGTY 461
Query: 639 VILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
V+LSN+YA G+W + T IR+ ++ + K+PGCS IE++N IH F V D H + + IY
Sbjct: 462 VLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIY 521
Query: 699 ATVDHLTATINSIIPF 714
+ L N I+ F
Sbjct: 522 QRLQEL----NRILRF 533
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 41/326 (12%)
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
+ MI G+ GR + ++L M + V + ++VL +C L + +++H+ +L
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVL 150
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
K GF VG ++ + + A+ +F+E+ D +HV ++M++ Y + + A++
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
LF + ++D V WT +I G R ++ +AL+LFR M+ V NEFT CV+ C+ LG
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKE-MNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
AL G+ VH ++ N +G AL Y I++A+RV+ M
Sbjct: 270 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM------------- 316
Query: 311 GGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLT 366
R+ + ISYN MI G AM ++ F M + N
Sbjct: 317 -------------------RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQV 357
Query: 367 SLNTMISVYSKNGELDEAVKLFDKTK 392
+L +++ S G LD +++F+ K
Sbjct: 358 TLVALLNACSHGGLLDIGLEVFNSMK 383
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 146/337 (43%), Gaps = 39/337 (11%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL 88
D P HV +T + I ++ G + EA +F ++ ++ W MI G + ++AL
Sbjct: 182 DEMPDRDHVAAT-VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKAL 240
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L M V NE + VLS+C+ G+L LG+ VHS + E VG+AL+
Sbjct: 241 ELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMY 300
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
RC I EA VF +RD +DV+++ T+IS
Sbjct: 301 SRCGDINEARRVFRVMRD-------------------------------KDVISYNTMIS 329
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
G A E A++ FR M PN+ TL ++ C+ G L G V +K +
Sbjct: 330 GLAMHGASVE-AINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN-SMKRVFN 387
Query: 269 FDNSIG--GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF 326
+ I G + + +++A R E++ E + +L+ + G +E E I
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 447
Query: 327 YGLRET-NPIS--YNLMIKGYAMSSQIEKSKRLFEKM 360
L E+ NP S Y L+ YA S + ++S + E M
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 13/256 (5%)
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
+I V S +D A +F N + +M+ G++ +G+ ++ + LY M SV
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNP-NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP 125
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
+ + +AC + + +HA + K F ++ VG +++ Y K G L +A++ F
Sbjct: 126 DNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 491 TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
+ + A T +IN Y+ G E++ LF+ + ++ + + A++ +N
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK----DTVCWTAMIDGLVRNKEMN 237
Query: 551 DGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL---KEAEEFINQMPIEADGVIWGAL 607
LE+F MQ+ V+ CV+ G L + F+ +E + AL
Sbjct: 238 KALELFREMQM-ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNAL 296
Query: 608 LNASWFWKDIEVGERA 623
+N DI R
Sbjct: 297 INMYSRCGDINEARRV 312
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
R T + R+C ++ +HA + +T + +V L+ S + A F+
Sbjct: 29 RKTLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 492 SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS------- 544
+ +PNV +TA+I+G+ G ++ + L+ M+ VLP+ ++L AC
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI 145
Query: 545 HAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIW 604
HA +L G S+ + ++++ G+SG L A++ ++MP + D V
Sbjct: 146 HAQVLKLGFGSSRSVGL------------KMMEIYGKSGELVNAKKMFDEMP-DRDHVAA 192
Query: 605 GALLN 609
++N
Sbjct: 193 TVMIN 197
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 286/505 (56%), Gaps = 22/505 (4%)
Query: 219 RALDLFRCMRRSEVLP----NEFT----LDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
R + + + EV P NEF+ + ++++CAR GA+ K HG I+ L+ D
Sbjct: 36 RNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGD 95
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE-EAELIFYGL 329
++ L Y ++ A++V++ M E L N++IG L R+E EA IF +
Sbjct: 96 VTLLNVLINAYSKCGFVELARQVFDGML-ERSLVSWNTMIG-LYTRNRMESEALDIFLEM 153
Query: 330 RET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN-----TMISVYSKNGE 380
R + + + ++ ++ + K+L ++ K LN ++ +Y+K G
Sbjct: 154 RNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
+ +AV++F+ + +++SVTW+SM++GY+ N + EAL LY +R+S++ ++ T S +
Sbjct: 213 IKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 441 ACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA 500
AC++L + +G+ +HA + K+ F +NV+V ++ VD Y+KCG L ++ F+ + N+
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 501 WTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
W +I+G+A H E ++LF M G+ PN TF ++LS C H GL+ +G F M+
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 561 ICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVG 620
Y ++P + HY+C+VD+LGR+G L EA E I +P + IWG+LL + +K++E+
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 451
Query: 621 ERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNN 680
E AAEKLF L+P V+LSN+YA +W + RK L+ +++K G SWI++ +
Sbjct: 452 EVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Query: 681 IHMFSVEDKTHAYSDVIYATVDHLT 705
+H FSV + H I +T+D+L
Sbjct: 512 VHTFSVGESGHPRIREICSTLDNLV 536
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 172/374 (45%), Gaps = 42/374 (11%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N+ I +K G + AR +FD M R++ SWNTMI Y++ EAL + M K
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
+E + S+VLS+C + K++H L +K+ + VG+ALL +C I +A V
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
FE ++D + V WS M++GYVQ E A
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQ--------------------------------NKNYEEA 247
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
L L+R +R + N+FTL VI C+ L AL GK +H + K G + + + +
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPIS 336
Y ++ ++ ++ + E L + N++I G R +E ++F +++ N ++
Sbjct: 308 YAKCGSLRESYIIFSEV-QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTSLNTMISVYSKNGELDEAVKLFDKT 391
++ ++ + +E+ +R F+ M N+ + M+ + + G L EA +L
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 392 KGERNSVTWNSMMS 405
+ + W S+++
Sbjct: 427 PFDPTASIWGSLLA 440
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 188/434 (43%), Gaps = 56/434 (12%)
Query: 82 GRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVG 141
GRY + + +H +L CAR+G++ K H +++ E +
Sbjct: 52 GRYSNEFSNRNLVHE------------ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLL 99
Query: 142 SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV 201
+ L+ +C + A VF+ + + + V W+ M+ Y + M A+D+F +M
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM------ 153
Query: 202 AWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
R +G + + EFT+ V+ C K +H L
Sbjct: 154 -----------RNEGFKFS---------------EFTISSVLSACGVNCDALECKKLHCL 187
Query: 262 CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE 321
+K +D + +G AL + Y I DA +V+ESM ++ + + S++ G + EE
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWS-SMVAGYVQNKNYEE 246
Query: 322 AELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMIS 373
A L++ + E N + + +I + + + + K++ + N+ ++ +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y+K G L E+ +F + + E+N WN+++SG+ + + E + L+ M++ + +
Sbjct: 307 MYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
TFS L C ++G+ + T NV + +VD + G L++A S
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 493 I-FSPNVAAWTALI 505
I F P + W +L+
Sbjct: 426 IPFDPTASIWGSLL 439
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 206/675 (30%), Positives = 338/675 (50%), Gaps = 82/675 (12%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRT-VSSWNTMISGYSQWGRYDEALA 89
E P V S ++ K G++ A +FD+MP R V+ WN MI+G + G ++ ++
Sbjct: 117 EIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVE 176
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
L MH+ V+ ++ F+ +LS C GSL GKQVHSL++K+GF V +AL+
Sbjct: 177 LFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
C + +A LVFEE + VRD V + +I G
Sbjct: 236 NCQVVVDACLVFEET-----------------------------DVAVRDQVTFNVVIDG 266
Query: 210 YA--RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGL 267
A +R++ +L +FR M + + P + T V+ C+ G VHGL IK G
Sbjct: 267 LAGFKRDE----SLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGY 319
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGL--ILMGR------- 318
+ + A Y + A +V+ES+ E L N++I +G+
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLE-EKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 319 ------IEEAELIFYGLRETN-PISYNLMIKG----YAMSSQIEKSKRLFEKMAPKNLTS 367
++ E F L T+ + M++ + +SS+IE S
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS-------------- 424
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM--RR 425
N +IS YSKNG++++A LF+++ +N ++WN+++SG+ HNG E L+ + +
Sbjct: 425 -NALISAYSKNGQIEKADLLFERSL-RKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
+ + T S L C S S G HA++ + +G AL++ YS+CG + +
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQN 542
Query: 486 AQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACS 544
+ F + +V +W +LI+ Y+ HG G ++ +++M +G V+P+AATF A+LSACS
Sbjct: 543 SLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
Query: 545 HAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEF--INQMPIEADGV 602
HAGL+ +GLEIF+SM + V ++H++C+VDLLGR+G L EAE I++ I +
Sbjct: 603 HAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD 662
Query: 603 IWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQ 662
+W AL +A D+++G+ A+ L + + S +V LSN+YA G W + R+ +
Sbjct: 663 VWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAIN 722
Query: 663 SLELRKDPGCSWIEL 677
+ K GCSW+ L
Sbjct: 723 MIGAMKQRGCSWMRL 737
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 259/559 (46%), Gaps = 29/559 (5%)
Query: 67 TVSSWNTMISGYSQWGRYDEALALASFMHR-SCVKLNEISFSAVLSSCARSGSLFLGKQV 125
T+ + N ++G ++ G AL L + +HR + ++ ++ S S +++ G QV
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMM 185
H ++SG V + LL R + + F+E+ + + W+ +LS + +
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 186 GNAMDLFGKMPVRDVVA-WTTLISGYARREDGC-ERALDLFRCMRRSEVLPNEFTLDCVI 243
A ++F KMP RD VA W +I+G +E G E +++LFR M + V ++F ++
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITGC--KESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
+C G+L GK VH L IK G +S+ AL Y + + DA V+E
Sbjct: 198 SMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 304 NVA-NSLIGGLILMGRIEEAELIF-----YGLRETNPISYNLM--IKGYAMSSQIE--KS 353
V N +I GL R +E+ L+F LR T+ ++M AM Q+
Sbjct: 257 QVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAI 315
Query: 354 KRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH 413
K +EK L S N +++YS + A K+F+ + E++ VTWN+M+S Y
Sbjct: 316 KTGYEKY---TLVS-NATMTMYSSFEDFGAAHKVFESLE-EKDLVTWNTMISSYNQAKLG 370
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
A+ +Y M + V TF L TSL +++ A + K + + + AL
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLL--ATSL-DLDVLEMVQACIIKFGLSSKIEISNAL 427
Query: 474 VDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV--LP 531
+ YSK G + A F N+ +W A+I+G+ ++G E + F +L V LP
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 532 NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEF 591
+A T +LS C L G + H+ + + ++++ + G ++ + E
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQT-HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 592 INQMPIEADGVIWGALLNA 610
NQM E D V W +L++A
Sbjct: 547 FNQMS-EKDVVSWNSLISA 564
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 282 bits (721), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 173/576 (30%), Positives = 281/576 (48%), Gaps = 71/576 (12%)
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
D +L S ++ Y + + +A +F +MP +D + W T+ISGY + E E ++ +FR
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE-SIQVFR 209
Query: 226 -CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
+ S + TL ++ A L L G +H L K G + + Y
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK- 268
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGY 344
C G+I+ +F R+ + ++YN MI GY
Sbjct: 269 -----------------C--------------GKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 345 AMSSQIEKSKRLFE-------KMAPKNLTSL----------------------------- 368
+ + E S LF+ ++ L SL
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVS 357
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
+ +VYSK E++ A KLFD++ E++ +WN+M+SGY NG +A+ L+ M++
Sbjct: 358 TALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
+ T + + AC L + G+ +H + T F++++YV TAL+ Y+KCG +A+A+R
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + N W +I+GY HG G E++ +F ML G+ P TF+ +L ACSHAGL
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ +G EIF+SM Y P+++HY C+VD+LGR+G L+ A +FI M IE +W LL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
A KD + +EKLF LDP+ + V+LSN+++ + Q T+R+ + +L K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 669 DPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
PG + IE+ H+F+ D++H IY ++ L
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 210/470 (44%), Gaps = 48/470 (10%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFMHRSCVKLNEISFSAVLS 111
+ +AR +FD MP + WNTMISGY + Y E++ + ++ SC +L+ + +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 112 SCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVL 171
+ A L LG Q+HSL K+G V + + +C I +F E R + V
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 172 WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE 231
++ M+ GY ++ LF ++ ++SG R
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKEL----------MLSGARLRSS---------------- 323
Query: 232 VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAK 291
TL ++ + L ++A +HG C+K S+ AL Y + I+ A+
Sbjct: 324 ------TLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 292 RVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMS 347
++++ E L N++I G G E+A +F ++++ NP++ ++ A
Sbjct: 375 KLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 348 SQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
+ K + + + + S +I +Y+K G + EA +LFD ++N VTWN+M
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD-LMTKKNEVTWNTM 492
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTP 462
+SGY +GQ EAL ++ M + + TF + AC+ ++G ++ ++ + +
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Query: 463 FQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
F+ +V +VD + GHL A + ++ P + W L+ H
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 183/413 (44%), Gaps = 60/413 (14%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
+ST ++ + +K E+ AR +FDE P +++ SWN MISGY+Q G ++A++L M +S
Sbjct: 356 VSTALTTVY-SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
N ++ + +LS+CA+ G+L LGK VH L+ + FE V +AL+ +C I EA
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
+F+ + N V W+ M+SGY L G+
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGY----------GLHGQ----------------------G 502
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
+ AL++F M S + P T CV+ C+ HAG V G I + + ++
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACS-----HAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 278 AEFYCDRDA------IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE 331
+ C D + A + E+M E +V +L+G + A + L E
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 332 TNP--ISYNLMI-------KGYAMSSQIEKS--KRLFEKMAPKNLTSLNTMISVYS---- 376
+P + Y++++ + Y ++ + ++ KR K L + V++
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE-ALKLYVTMRRLSV 428
+ ++ E + +K +G+ + +H+ + E L + V RL++
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 171/382 (44%), Gaps = 51/382 (13%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF 93
H +V++ IS+ +K G++ +F E + ++N MI GY+ G + +L+L
Sbjct: 255 HDYVLTGFISL--YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
+ S +L S ++S SG L L +H LKS F V +AL +
Sbjct: 313 LMLSGARLRS---STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
I A +F+E + + W+ M+SGY Q +
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGL----------------------------- 400
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
E A+ LFR M++SE PN T+ C++ CA+LGAL GK VH L DF++SI
Sbjct: 401 ---TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV--RSTDFESSI 455
Query: 274 --GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE 331
AL Y +I +A+R+++ M + + N++I G L G+ +EA IFY +
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 332 T----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELD 382
+ P+++ ++ + + +++ +F M + ++ M+ + + G L
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 383 EAVKLFDKTKGERNSVTWNSMM 404
A++ + E S W +++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLL 596
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 326/656 (49%), Gaps = 50/656 (7%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G LA AR +F+EM R V W MI YS+ G EA +L + M +K ++
Sbjct: 92 AKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLL 151
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+LS L + +H + GF+ C I
Sbjct: 152 EMLSGVLEITQL---QCLHDFAVIYGFD----------------CDIA------------ 180
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ + ML+ Y + D +G+A DLF +M RD+V+W T+ISGYA + E L+R M
Sbjct: 181 ---VMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR-M 236
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R + P++ T + + + L G+++H +K G D D + AL Y
Sbjct: 237 RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKE 296
Query: 288 DDAKRVYESMGGE--ACLNVANSLIGGLILMGRIEEAELIFYG-LRETNPISYNLMIKGY 344
+ + RV E++ + C V +I GL+ +GR E+A ++F L+ + +S +
Sbjct: 297 EASYRVLETIPNKDVVCWTV---MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVV 353
Query: 345 AMSSQIEK-------SKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
A +Q+ + + +LN++I++Y+K G LD+++ +F++ ER+
Sbjct: 354 ASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDL 412
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS-TFSVLFRACTSLCSFQQGQLLHA 456
V+WN+++SGY N +AL L+ M+ +V S T L +AC+S + G+L+H
Sbjct: 413 VSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC 472
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
+ ++ + V TALVD YSKCG+L AQR F SI +V +W LI GY +HG G
Sbjct: 473 IVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDI 532
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
++ ++ L G+ PN F+A+LS+CSH G++ GL+IF SM + V P EH CVV
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPIS 636
DLL R+ R+++A +F + + G +L+A EV + E + L P
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAG 652
Query: 637 GFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHA 692
+V L + +A + RW + +++SL L+K PG S IE+N F + +H+
Sbjct: 653 HYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/592 (23%), Positives = 266/592 (44%), Gaps = 54/592 (9%)
Query: 65 LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQ 124
L + +N+ I+ S G + + L+ S M + + + +F ++L +CA L G
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 125 VHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDM 184
+H +L +GF + S+L+ + + A VFEE+R+
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE------------------ 109
Query: 185 MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
RDVV WT +I Y+R E A L MR + P TL +
Sbjct: 110 -------------RDVVHWTAMIGCYSRAGIVGE-ACSLVNEMRFQGIKPGPVTL---LE 152
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
+ + + + + +H + G D D ++ ++ YC D + DAK +++ M ++
Sbjct: 153 MLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVS 212
Query: 305 VANSLIGGLILMGRIEEAELIFYGLR------ETNPISYNLMIKGYAMSSQIEKSKRLFE 358
N++I G +G + E + Y +R + +L + G +E + L
Sbjct: 213 -WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTM--CDLEMGRMLHC 269
Query: 359 KMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
++ ++ +I++Y K G+ + + ++ + T ++ V W M+SG + G+
Sbjct: 270 QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE-TIPNKDVVCWTVMISGLMRLGRAE 328
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
+AL ++ M + D S + + +C L SF G +H ++ + + + +L+
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLI 388
Query: 475 DFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLP-NA 533
Y+KCGHL + F + ++ +W A+I+GYA + +++LLF M + V ++
Sbjct: 389 TMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDS 448
Query: 534 ATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFIN 593
T V++L ACS AG L G ++ H + I + P T +VD+ + G L+ A+ +
Sbjct: 449 FTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFD 507
Query: 594 QMPIEADGVIWGALLNASWFWKDIEVG-ERAAEKLFS-LDPNPISGFVILSN 643
+ + D V WG L+ F ++ E +E L S ++PN + +LS+
Sbjct: 508 SISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)
Query: 390 KTKGERNSVTW-NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
+T NS + NS ++ +G H + L + +M + TF L +AC SL
Sbjct: 3 RTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRL 62
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
G +H + F ++ Y+ ++LV+ Y+K G LA A++ F + +V WTA+I Y
Sbjct: 63 SFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCY 122
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN-DGLEIFHSMQICYRVTP 567
+ G+ E+ L M QG+ P T + +LS G+L L+ H + Y
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDC 177
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
I +++L + + +A++ +QM + D V W +++
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQME-QRDMVSWNTMISG 219
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 34/296 (11%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH-RSCV 99
N I AK G L ++ +F+ M R + SWN +ISGY+Q +AL L M ++
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+++ + ++L +C+ +G+L +GK +H ++++S LV +AL+ +C + A+
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
F+ + W +DVV+W LI+GY G +
Sbjct: 505 CFDSIS------W-------------------------KDVVSWGILIAGYGFHGKG-DI 532
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD-GLDFDNSIGGALA 278
AL+++ S + PN V+ C+ G + G + ++D G++ ++ +
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
+ C I+DA + Y+ ++V ++ G+ E ++I + E P
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKP 648
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/668 (27%), Positives = 331/668 (49%), Gaps = 49/668 (7%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEA-LALASFMH 95
V N ++ G + +A +FD MP R + SWN+MI +S G +E+ L L M
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 96 RS---CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
+ + + VL CAR + LGK VH +K +K ++ +AL+ +C
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
I A+++F+ M N ++VV+W T++ G++
Sbjct: 342 CITNAQMIFK----------------------MNNN---------KNVVSWNTMVGGFSA 370
Query: 213 REDGCERALDLFRCMRR--SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
D D+ R M +V +E T+ + +C L + K +H +K ++
Sbjct: 371 EGD-THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
+ A Y ++ A+RV+ + + +N N+LIGG + ++
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKT-VNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 331 ETNPISYNLMIKGYAMSSQIEKSKRLFEKM--------APKNLTSLNTMISVYSKNGELD 382
+ + + + + KS RL +++ ++L +++S+Y GEL
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
LFD + +++ V+WN++++GY+ NG AL ++ M + + +F AC
Sbjct: 549 TVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
+ L S + G+ HA+ K + + ++ +L+D Y+K G + + + F + + A+W
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
A+I GY HGL E+I LF M G P+ TF+ +L+AC+H+GL+++GL M+
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFI-NQMPIEADGVIWGALLNASWFWKDIEVGE 621
+ + P ++HY CV+D+LGR+G+L +A + +M EAD IW +LL++ +++E+GE
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 622 RAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNI 681
+ A KLF L+P +V+LSN+YA LG+W +R+R+ + LRKD GCSWIELN +
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847
Query: 682 HMFSVEDK 689
F V ++
Sbjct: 848 FSFVVGER 855
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 188/449 (41%), Gaps = 43/449 (9%)
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+F + +++ W +IS Y+R E E + +++LP+ FT CVI+ CA +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
+ G VHGL +K GL D +G AL FY + DA ++++ M E L NS+I
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM-PERNLVSWNSMI 260
Query: 311 GGLILMGRIEEAELIFYGLRETN-----------------------PISYNLMIKGYAMS 347
G EE+ L+ + E N I + G+A+
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 348 SQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY 407
+++K L N ++ +YSK G + A +F K +N V+WN+M+ G+
Sbjct: 321 LRLDKE-----------LVLNNALMDMYSKCGCITNAQMIF-KMNNNKNVVSWNTMVGGF 368
Query: 408 IHNGQHSEALKLYVTMRRLSVDHSRSTFSVL--FRACTSLCSFQQGQLLHAHLSKTPFQA 465
G + M D ++L C + LH + K F
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 466 NVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSML 525
N V A V Y+KCG L+ AQR F I S V +W ALI G+A S+ M
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
+ G+LP++ T ++LSACS L G E+ H I + + Y V+ L G L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEV-HGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 586 KEAEEFINQMP----IEADGVIWGALLNA 610
+ + M + + VI G L N
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNG 576
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM---RRLS 427
+I++Y+ G D++ +FD + +N WN+++S Y N + E L+ ++ M L
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRS-KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLL 184
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
DH T+ + +AC + G +H + KT +V+VG ALV FY G + DA
Sbjct: 185 PDHF--TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ----GVLPNAATFVAILSAC 543
+ F + N+ +W ++I ++ +G ES LL M+ + +P+ AT V +L C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
+ + G + H + R+ + ++D+ + G + A + I +M + V
Sbjct: 303 AREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVS 360
Query: 604 WGALL 608
W ++
Sbjct: 361 WNTMV 365
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 309/613 (50%), Gaps = 34/613 (5%)
Query: 101 LNEISFSAVLSSCARSGSL-FLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
LN + S +LS C R G LG +H+ ++K+ E F E
Sbjct: 42 LNHVDMSLLLSICGREGWFPHLGPCLHASIIKNP-EFF--------------------EP 80
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
V ++ V+W+ +LS Y + + +A+ LF +MP+RDV++ + G+ R + E
Sbjct: 81 VDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRE-TES 139
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
L + M S + TL V+ +C K++H L I G D + S+G L
Sbjct: 140 GFVLLKRMLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLIT 198
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF----YGLRETNPI 335
Y + V++ M + + ++I GLI E+ +F GL N +
Sbjct: 199 SYFKCGCSVSGRGVFDGMSHRNVITL-TAVISGLIENELHEDGLRLFSLMRRGLVHPNSV 257
Query: 336 SYNLMIKGYAMSSQIEKSKR----LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKT 391
+Y + + S +I + ++ L++ L + ++ +YSK G +++A +F+ T
Sbjct: 258 TYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST 317
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
E + V+ ++ G NG EA++ ++ M + V+ + S + S G
Sbjct: 318 T-EVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 452 QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYH 511
+ LH+ + K F N +V L++ YSKCG L D+Q F + N +W ++I +A H
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 512 GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH 571
G G ++ L+ M V P TF+++L ACSH GL++ G E+ + M+ + + P EH
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH 496
Query: 572 YTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLD 631
YTC++D+LGR+G LKEA+ FI+ +P++ D IW ALL A F D EVGE AAE+LF
Sbjct: 497 YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA 556
Query: 632 PNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTH 691
P+ S ++++N+Y+ G+W ++ KR++++ + K+ G S IE+ + H F VEDK H
Sbjct: 557 PDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLH 616
Query: 692 AYSDVIYATVDHL 704
++ IY + L
Sbjct: 617 PQAEAIYDVLSGL 629
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 220/498 (44%), Gaps = 53/498 (10%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL 88
D++ H ++ N ++ AK G+L +A +FDEMP+R V S N + G+ + +
Sbjct: 82 DADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGF 141
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALL--Y 146
L M S + + + VLS C + K +H+L + SG++K VG+ L+ Y
Sbjct: 142 VLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSY 200
Query: 147 FCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL 206
F C G VF+ + N + + ++SG ++ ++
Sbjct: 201 FKCGCSVSGRG--VFDGMSHRNVITLTAVISGLIENEL---------------------- 236
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
EDG L LF MRR V PN T + C+ + G+ +H L K G
Sbjct: 237 ------HEDG----LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESMG--GEACLNVANSLIGGLILMGRIEEAEL 324
++ + I AL + Y +I+DA ++ES E + V ++ GL G EEA
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV---ILVGLAQNGSEEEAIQ 343
Query: 325 IFYGLRE------TNPISYNLMIKGYAMSSQIEKS--KRLFEKMAPKNLTSLNTMISVYS 376
F + + N +S L + S + K + ++ N N +I++YS
Sbjct: 344 FFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYS 403
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
K G+L ++ +F + +RN V+WNSM++ + +G ALKLY M L V + TF
Sbjct: 404 KCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFL 462
Query: 437 VLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-F 494
L AC+ + +G +LL+ + T ++D + G L +A+ S+
Sbjct: 463 SLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPL 522
Query: 495 SPNVAAWTALINGYAYHG 512
P+ W AL+ ++HG
Sbjct: 523 KPDCKIWQALLGACSFHG 540
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 239/396 (60%), Gaps = 9/396 (2%)
Query: 316 MGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVY 375
+G+ A+++ +GL + +P ++ Y+ + ++R+F+ K+L + N++++ Y
Sbjct: 80 LGQRTHAQILLFGL-DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAY 138
Query: 376 SKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR-----RLSVDH 430
+K G +D+A KLFD+ ERN ++W+ +++GY+ G++ EAL L+ M+ V
Sbjct: 139 AKAGLIDDARKLFDEMP-ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
+ T S + AC L + +QG+ +HA++ K + ++ +GTAL+D Y+KCG L A+R F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 491 TSIFSP-NVAAWTALINGYAYHGLGSESILLFRSMLV-QGVLPNAATFVAILSACSHAGL 548
++ S +V A++A+I A +GL E LF M + PN+ TFV IL AC H GL
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+N+G F M + +TP+I+HY C+VDL GRSG +KEAE FI MP+E D +IWG+LL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
+ S DI+ E A ++L LDP +V+LSN+YA GRW + IR ++ + K
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK 437
Query: 669 DPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
PGCS++E+ +H F V D++ S+ IYA +D +
Sbjct: 438 VPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEI 473
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 22/320 (6%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+F +L S L LG++ H+ +L G +K V ++LL C + A+ VF++
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC---ERAL 221
+ W+ +++ Y + ++ +A LF +MP R+V++W+ LI+GY C + AL
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM----CGKYKEAL 179
Query: 222 DLFRCMRRSE-----VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
DLFR M+ + V PNEFT+ V+ C RLGAL GK VH K ++ D +G A
Sbjct: 180 DLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTA 239
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET---- 332
L + Y +++ AKRV+ ++G + + +++I L + G +E +F + +
Sbjct: 240 LIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN 299
Query: 333 -NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVK 386
N +++ ++ I + K F+ M + ++ M+ +Y ++G + EA
Sbjct: 300 PNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAES 359
Query: 387 LFDKTKGERNSVTWNSMMSG 406
E + + W S++SG
Sbjct: 360 FIASMPMEPDVLIWGSLLSG 379
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 41/331 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH-----RSCVKLN 102
AK G + +AR +FDEMP R V SW+ +I+GY G+Y EAL L M + V+ N
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN 198
Query: 103 EISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
E + S VLS+C R G+L GK VH+ + K E ++G+AL+ +C + A+ VF
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 163 ELRDGNHV-LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERAL 221
L V +S M+ + LF +M D
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD---------------------- 296
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD-GLDFDNSIGGALAEF 280
+ PN T ++ C G ++ GK + I++ G+ G + +
Sbjct: 297 ---------NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDL 347
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI---SY 337
Y I +A+ SM E + + SL+ G ++G I+ E L E +P+ +Y
Sbjct: 348 YGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAY 407
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL 368
L+ YA + + + K + +M K + +
Sbjct: 408 VLLSNVYAKTGRWMEVKCIRHEMEVKGINKV 438
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 100/251 (39%), Gaps = 40/251 (15%)
Query: 397 SVTWNSMMSGYIHN---GQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQL 453
S WN ++ +HN Q + +Y+ MR V TF L + + GQ
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP----------------- 496
HA + + +V T+L++ YS CG L AQR F S
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 497 --------------NVAAWTALINGYAYHGLGSESILLFRSMLVQG-----VLPNAATFV 537
NV +W+ LINGY G E++ LFR M + V PN T
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 538 AILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPI 597
+LSAC G L G + H+ Y V I T ++D+ + G L+ A+ N +
Sbjct: 204 TVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 598 EADGVIWGALL 608
+ D + A++
Sbjct: 263 KKDVKAYSAMI 273
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/660 (27%), Positives = 312/660 (47%), Gaps = 112/660 (16%)
Query: 124 QVHSLLLKSGFEKFGLVGSALL--YFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
Q H+ +LKSG + G + + L+ Y C +A+LV + + D +S ++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNC--FNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
+ ++ +F +M ++ S VLPN F
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIP--------------------------DSHVLPNLF---- 123
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY----------------CDRD 285
++CA L A GK +H + GLD D + G++ Y D+D
Sbjct: 124 --KVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKD 181
Query: 286 AI---------------DDAKRV---YESMGGEACLNVANSLIGGLILMGRIEEAELIFY 327
+ ++ R+ ES G EA + N ++ G G +EA ++F
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 328 GLR-------------------ETNPISYNLMIKGYAMSSQIEKSK-------------- 354
+ ++ ++ +I GY + + K K
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 355 ------RLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG---ERNSVTWNSMMS 405
LF + N I+ S+NG +D+A+++F+ K E N V+W S+++
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 406 GYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQA 465
G NG+ EAL+L+ M+ V + T + AC ++ + G+ H +
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 466 NVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSML 525
NV+VG+AL+D Y+KCG + +Q F + + N+ W +L+NG++ HG E + +F S++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
+ P+ +F ++LSAC GL ++G + F M Y + P +EHY+C+V+LLGR+G+L
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 586 KEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMY 645
+EA + I +MP E D +WGALLN+ ++++ E AAEKLF L+P +V+LSN+Y
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 646 AILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLT 705
A G W + +IR +++SL L+K+PGCSWI++ N ++ DK+H D I +D ++
Sbjct: 602 AAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEIS 661
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 184/386 (47%), Gaps = 19/386 (4%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALALAS 92
V++ + + A+ G L E + EM + SWN ++SG+++ G + EA+ +
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
+H ++++ S+VL S S L +G+ +H ++K G K V SA++ +
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLIS 208
+ +F + + + ++G + ++ A+++F + +VV+WT++I+
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
G A+ E AL+LFR M+ + V PN T+ ++ C + AL G+ HG ++ L
Sbjct: 362 GCAQNGKDIE-ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
+ +G AL + Y I+ ++ V+ M + L NSL+ G + G+ +E IF
Sbjct: 421 DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN-LVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 329 LRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNG 379
L T + IS+ ++ ++ + F+ M+ + L + M+++ + G
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMS 405
+L EA L + E +S W ++++
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLN 565
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/504 (20%), Positives = 217/504 (43%), Gaps = 58/504 (11%)
Query: 55 EARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCA 114
+A + +P T+ S++++I ++ + +++ + S M + + + CA
Sbjct: 68 DADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127
Query: 115 RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
+ +GKQ+H + SG + V ++ + +RC +G+A VF+ + D + V S
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRS 230
+L Y ++ + + + +M ++V+W ++SG+ R + A+ +F+ +
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF-NRSGYHKEAVVMFQKIHHL 246
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD---AI 287
P++ T+ V+ L+ G+++HG IK GL D + A+ + Y I
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA----ELIFYGLRETNPISYNLMIKG 343
+E M C N+ I GL G +++A EL E N +S+ +I G
Sbjct: 307 ISLFNQFEMMEAGVC----NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 344 YAMSSQIEKSKRLFEKM-----------------APKNLTSL------------------ 368
A + + ++ LF +M A N+ +L
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 369 ----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
+ +I +Y+K G ++ + +F+ +N V WNS+M+G+ +G+ E + ++ ++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHL 483
R + +F+ L AC + +G +S+ + + + +V+ + G L
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 484 ADAQRSFTSI-FSPNVAAWTALIN 506
+A + F P+ W AL+N
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLN 565
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 261/487 (53%), Gaps = 5/487 (1%)
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+F ++P W LI GY+ + E L R MR P+E+T V+++C+ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
+ G VHGL ++ G D D +G + +FY + A++V+ M ++ +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVS-WTALV 183
Query: 311 GGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT 370
+ G +EEA+ +F + E N S+N ++ G S + +K+LF++M +++ S +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
MI Y+K G++ A LF++ +G + W++++ GY NGQ +EA K++ M +V
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARG-VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKP 302
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSK--TPFQANVYVGTALVDFYSKCGHLADAQR 488
L AC+ + F+ + + ++L + F ++ YV AL+D +KCGH+ A +
Sbjct: 303 DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAKCGHMDRAAK 361
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + ++ ++ +++ G A HG GSE+I LF M+ +G++P+ F IL C + L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ +GL F M+ Y + + +HY+C+V+LL R+G+LKEA E I MP EA WG+LL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
+ E+ E A LF L+P +V+LSN+YA L RW +R ++ + K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 669 DPGCSWI 675
G SWI
Sbjct: 542 ICGRSWI 548
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 185/420 (44%), Gaps = 73/420 (17%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS-CVKLNEISFSAVLSSCARSG 117
+F+ +P WN +I GYS + E +++ M R+ + +E +F V+ C+ +G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 118 SLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLS 177
+ +G VH L+L+ GF+K +VG++ + F +C + A VF E+ + N V W+ ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 178 GYVQR----------DMMG---------------------NAMDLFGKMPVRDVVAWTTL 206
YV+ D+M NA LF +MP RD++++T++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 207 ISGYARRED------------GCE------------------RALDLFRCMRRSEVLPNE 236
I GYA+ D G + A +F M V P+E
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS-IGGALAEFYCDRDAIDDAKRVYE 295
F + ++ C+++G + V + F + + AL + +D A +++E
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 296 SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIE 351
M ++ S++ G+ + G EA +F + + + +++ +++K S +E
Sbjct: 365 EMPQRDLVSYC-SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 352 KSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+ R FE M K + + ++++ S+ G+L EA +L E ++ W S++ G
Sbjct: 424 EGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 483
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 332/640 (51%), Gaps = 79/640 (12%)
Query: 102 NEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVF 161
E + + L SCA S + G+Q+H +LKSG + G + +++L +C + +AE VF
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 162 EELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERAL 221
+ + +++M+ GYV+ + +A+ LF MP R V++TTLI GYA+ E A+
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE-AM 158
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
+LFR MR ++ NE TL VI C+ LG + +++ L IK L+ + L Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 282 ----CDRDA---------------------------IDDAKRVYESMGGEACLNVANSLI 310
C +DA I+ A+ +++ + E + ++I
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTMI 277
Query: 311 GGLILMGRIEEAELIFY------GLRETNPISYNLM------------------------ 340
G + +++EA L++Y G++ + + +L+
Sbjct: 278 DGCLRKNQLDEA-LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
Query: 341 ----------IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDK 390
I YA+S+ I+ + + FE ++ S N +I+ + KNG +++A ++FD+
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ 396
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS-VDHSRSTFSVLFRACTSLCSFQ 449
T +++ +WN+M+SGY + AL L+ M S V T +F A +SL S +
Sbjct: 397 TH-DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF---TSIFSPNVAAWTALIN 506
+G+ H +L+ + N + A++D Y+KCG + A F +I S ++ W A+I
Sbjct: 456 EGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 507 GYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVT 566
G A HG ++ L+ + + PN+ TFV +LSAC HAGL+ G F SM+ + +
Sbjct: 516 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE 575
Query: 567 PTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEK 626
P I+HY C+VDLLG++GRL+EA+E I +MP++AD +IWG LL+AS ++E+ E AA +
Sbjct: 576 PDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATE 635
Query: 627 LFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLEL 666
L ++DP+ V+LSN+YA GRW +R+ +++ ++
Sbjct: 636 LAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 237/518 (45%), Gaps = 46/518 (8%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
S NI + ++ L +A +FD MP R+ S+ T+I GY+Q ++ EA+ L M
Sbjct: 109 SFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG 168
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAE 158
+ LNE++ + V+S+C+ G ++ + + SL +K E V + LL+ C + +A
Sbjct: 169 IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDAR 228
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE 218
+F+E+ + N V W++ML+GY + ++ A +LF ++ +D+V+W T+I G R+ + +
Sbjct: 229 KLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK-NQLD 287
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
AL + M R + P+E + ++ AR G +HG +K G D + + +
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN 338
FY + I A + +E+ + + N+LI G + G +E+A +F + + S+N
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDH-IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWN 406
Query: 339 LMIKGYAMSSQIEKSKRLFEKM-------------------------------------- 360
MI GYA S + + LF +M
Sbjct: 407 AMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNF 466
Query: 361 --APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV--TWNSMMSGYIHNGQHSEA 416
P N +I +Y+K G ++ A+ +F +TK +S WN+++ G +G A
Sbjct: 467 STIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Query: 417 LKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL-SKTPFQANVYVGTALVD 475
L LY ++ L + + TF + AC + G+ + S + ++ +VD
Sbjct: 527 LDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVD 586
Query: 476 FYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
K G L +A+ + +V W L++ HG
Sbjct: 587 LLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 189/398 (47%), Gaps = 14/398 (3%)
Query: 27 LRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDE 86
L D P ++++ N+ + +K G + +A +FD++ + + SW TMI G + + DE
Sbjct: 230 LFDEMPER-NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDE 288
Query: 87 ALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY 146
AL + M R +K +E+ +LS+ ARS G Q+H ++K GF+ + + + +++
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIH 348
Query: 147 FCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL 206
F I A FE + + +++G+V+ M+ A ++F + +D+ +W +
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAM 408
Query: 207 ISGYARREDGCERALDLFRCM-RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD 265
ISGYA+ + AL LFR M S+V P+ T+ V + LG+L GK H
Sbjct: 409 ISGYAQSLSP-QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 266 GLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAE 323
+ ++++ A+ + Y +I+ A ++ + ++ N++I G G + A
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Query: 324 LIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISV 374
++ L+ + N I++ ++ + +E K FE M ++ M+ +
Sbjct: 528 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 375 YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
K G L+EA ++ K + + + W ++S +G
Sbjct: 588 LGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 31/287 (10%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFM 94
H+ S N IA K G + +AR +FD+ + + SWN MISGY+Q AL L +
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
S VK + I+ +V S+ + GSL GK+ H L S + +A++ +C I
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
A +F + ++ + + W +I G A
Sbjct: 490 ETALNIFHQTKN----------------------------ISSSTISPWNAIICGSATHG 521
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD-GLDFDNSI 273
+ ALDL+ ++ + PN T V+ C G + GK D G++ D
Sbjct: 522 HA-KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKH 580
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
G + + +++AK + + M +A + + L+ G +E
Sbjct: 581 YGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
S D R+ S L +C S G+ +H + K+ +N Y+ ++++ Y+KC LADA
Sbjct: 37 SSDTERALVSAL-GSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 487 Q-------------------------------RSFTSIFSPNVAAWTALINGYAYHGLGS 515
+ + F + + ++T LI GYA + S
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
E++ LFR M G++ N T ++SACSH G + D + S+ I ++ + T +
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWD-CRMLQSLAIKLKLEGRVFVSTNL 214
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ + LK+A + ++MP E + V W +LN
Sbjct: 215 LHMYCLCLCLKDARKLFDEMP-ERNLVTWNVMLNG 248
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 192/679 (28%), Positives = 325/679 (47%), Gaps = 47/679 (6%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G++ +FD + + WN M++GY++ G D + S M + N ++F VL
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
S CA + LG Q+H L++ SG + G + ++LL +C +A +F
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR-------- 298
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
MM A D V W +ISGY + E +L F M S
Sbjct: 299 -------------MMSRA----------DTVTWNCMISGYVQ-SGLMEESLTFFYEMISS 334
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
VLP+ T ++ ++ L K +H ++ + D + AL + Y + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN-------LMIKG 343
+ ++ S + V ++I G + G ++ +F L + IS N L + G
Sbjct: 395 QNIF-SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIG 452
Query: 344 YAMSSQIEKSKRLFE-KMAPKNLTSLN-TMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
++ ++ + F K N ++ +I +Y+K G ++ A ++F++ +R+ V+WN
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL-SKRDIVSWN 511
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
SM++ + S A+ ++ M + + + S AC +L S G+ +H + K
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH 571
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLF 521
++VY + L+D Y+KCG+L A F ++ N+ +W ++I HG +S+ LF
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLF 631
Query: 522 RSMLVQ-GVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
M+ + G+ P+ TF+ I+S+C H G +++G+ F SM Y + P EHY CVVDL G
Sbjct: 632 HEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFG 691
Query: 581 RSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVI 640
R+GRL EA E + MP D +WG LL A K++E+ E A+ KL LDP+ +V+
Sbjct: 692 RAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVL 751
Query: 641 LSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYAT 700
+SN +A W T +R ++ E++K PG SWIE+N H+F D H S IY+
Sbjct: 752 ISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSL 811
Query: 701 VDHLTAT--INSIIPFNYI 717
++ L + IP Y+
Sbjct: 812 LNSLLGELRLEGYIPQPYL 830
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 264/609 (43%), Gaps = 63/609 (10%)
Query: 25 TLLRDSEPHHPHVISTNIS---------IAHRAKTGELAEARHMFDEMPLR--TVSSWNT 73
LLR + H +I +IS + A G ++ MF + LR ++ WN+
Sbjct: 49 NLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNS 108
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCAR----SGSLFLGKQVHSLL 129
+IS + + G ++ALA M V + +F ++ +C G FL V SL
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 130 LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAM 189
+ D N + S ++ Y++ +
Sbjct: 169 M-----------------------------------DCNEFVASSLIKAYLEYGKIDVPS 193
Query: 190 DLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARL 249
LF ++ +D V W +++GYA+ + + F MR ++ PN T DCV+ +CA
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKC-GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 250 GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
+ G +HGL + G+DF+ SI +L Y DDA +++ M A N +
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM-SRADTVTWNCM 311
Query: 310 IGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKR----LFEKMA 361
I G + G +EE+ FY + + + I+++ ++ + +E K+ +
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI 371
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
++ + +I Y K + A +F + + V + +M+SGY+HNG + ++L+++
Sbjct: 372 SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV-DVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 422 TMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
+ ++ + + T + L + + G+ LH + K F +G A++D Y+KCG
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
+ A F + ++ +W ++I A S +I +FR M V G+ + + A LS
Sbjct: 491 RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
AC++ + G I H I + + + + ++D+ + G LK A M E +
Sbjct: 551 ACANLPSESFGKAI-HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNI 608
Query: 602 VIWGALLNA 610
V W +++ A
Sbjct: 609 VSWNSIIAA 617
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 134/287 (46%), Gaps = 7/287 (2%)
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT----SLNTMISVYSKNGELDEA 384
L ET P +L+++ + + + + K++ + +++ + ++ +Y+ G +
Sbjct: 30 LEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC 89
Query: 385 VKLFDKTKGERNSV-TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
K+F + R+S+ WNS++S ++ NG ++AL Y M V STF L +AC
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 149
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA 503
+L +F+ L +S N +V ++L+ Y + G + + F + + W
Sbjct: 150 ALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
++NGYA G I F M + + PNA TF +LS C+ L++ G+++ H + +
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVS 268
Query: 564 RVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
V ++ + + GR +A + M AD V W +++
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G + A +F+ + R + SWN+MI+ +Q A+ + M S + + +S S
Sbjct: 487 AKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
A LS+CA S GK +H ++K S L+ +C + A VF+ +++
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR-----DVVAWTTLISGYARREDGCERALD 222
N V W+ +++ + +++ LF +M + D + + +IS D + +
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD-VDEGVR 665
Query: 223 LFRCMRRSE-VLPNEFTLDCVIRICARLGAL 252
FR M + P + CV+ + R G L
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 194/649 (29%), Positives = 321/649 (49%), Gaps = 70/649 (10%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G +AEA +F +P +V SW M+SGY++ AL + M S V++N + +
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+V+S+C R + QVH+ + KSGF V +AL+ + I +E VFE+L D
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD- 414
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+QR + N M + S ++ G +A+ LF M
Sbjct: 415 ------------IQRQNIVNVM----------------ITSFSQSKKPG--KAIRLFTRM 444
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ + +EF+ V + + L L+ GK VHG +K GL D ++G +L Y ++
Sbjct: 445 LQEGLRTDEFS---VCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 288 DDAKRVYESM--GGEACLNVANSLIGGLILMGRIEEAELIFYGLRE--TNPISYNLM--- 340
+++ ++++ + AC S+I G G + EA +F + + T+P L
Sbjct: 502 EESYKLFQGIPFKDNACWA---SMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 341 --------------IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVK 386
I GY + + I+K L + ++++YSK G L A +
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG-----------SALVNMYSKCGSLKLARQ 607
Query: 387 LFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLC 446
++D+ E + V+ +S++SGY +G + L+ M S + +A
Sbjct: 608 VYDRLP-ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD 666
Query: 447 SFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALIN 506
G +HA+++K VG++L+ YSK G + D ++F+ I P++ AWTALI
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 507 GYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVT 566
YA HG +E++ ++ M +G P+ TFV +LSACSH GL+ + +SM Y +
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 567 PTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEK 626
P HY C+VD LGRSGRL+EAE FIN M I+ D ++WG LL A ++E+G+ AA+K
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKK 846
Query: 627 LFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWI 675
L+P+ ++ LSN+ A +G W + RK ++ ++K+PG S +
Sbjct: 847 AIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/576 (24%), Positives = 261/576 (45%), Gaps = 57/576 (9%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+ +G +A+A +FD +P V S N MISGY Q ++E+L S MH + NEIS+
Sbjct: 95 SNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYG 154
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+V+S+C+ + + V +K G+ + +V SAL+ + +A VF +
Sbjct: 155 SVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N W+ +++G ++ G DLF +M V G+ +
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCV-----------GFQK--------------- 248
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
P+ +T V+ CA L L GKVV IK G + D + A+ + Y +
Sbjct: 249 ------PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKG 343
+A V+ + + ++ ++ G A IF +R E N + +I
Sbjct: 302 AEAMEVFSRIPNPSVVS-WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 344 YAMSSQIEKSKR----LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
S + ++ + +F+ + + +IS+YSK+G++D + ++F+ +
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRR--LSVDHSRSTFSVLFRACTSLC---SFQQGQLL 454
N M++ + + + +A++L+ M + L D F C+ L G+ +
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE--------FSVCSLLSVLDCLNLGKQV 472
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
H + K+ ++ VG++L YSKCG L ++ + F I + A W ++I+G+ +G
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC 574
E+I LF ML G P+ +T A+L+ CS L G EI H + + ++ +
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDKGMDLGSA 591
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+V++ + G LK A + +++P E D V +L++
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISG 626
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 206/472 (43%), Gaps = 20/472 (4%)
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
+R I +A L+ L + L +LS Y M +A LF +P DVV+ +IS
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
GY ++ E +L F M NE + VI C+ L A ++V IK G
Sbjct: 124 GY-KQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY- 327
F + AL + + +DA +V+ A + N++I G + +F+
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 328 ---GLRETNPISYNLMIKGYAMSSQIEKSKRLFE---KMAPKNLTSLNTMISVYSKNGEL 381
G ++ + +Y+ ++ A ++ K + K +++ ++ +Y+K G +
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHM 301
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
EA+++F + + V+W M+SGY + AL+++ MR V+ + T + + A
Sbjct: 302 AEAMEVFSRIPNP-SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF---TSIFSPNV 498
C + +HA + K+ F + V AL+ YSK G + +++ F I N+
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 499 AAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHS 558
+I ++ ++I LF ML +G+ + + ++LS LN G ++ H
Sbjct: 421 V--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQV-HG 474
Query: 559 MQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ + + + + L + G L+E+ + +P + D W ++++
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISG 525
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 259/508 (50%), Gaps = 34/508 (6%)
Query: 183 DMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCV 242
D + A L P D + TL+ GY+ ++ MR+ V P+ F+ V
Sbjct: 53 DALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFV 112
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC 302
I+ +L G +H +K GL E+
Sbjct: 113 IKAVENFRSLRTGFQMHCQALKHGL--------------------------------ESH 140
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP 362
L V +LIG G +E A +F + + N +++N +I + + ++ +F+KM
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 363 KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
+N TS N M++ Y K GEL+ A ++F + R+ V+W++M+ G HNG +E+ +
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMP-HRDDVSWSTMIVGIAHNGSFNESFLYFRE 259
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
++R + + + + + AC+ SF+ G++LH + K + V V AL+D YS+CG+
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 483 LADAQRSFTSIFSPN-VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
+ A+ F + + +WT++I G A HG G E++ LF M GV P+ +F+++L
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
ACSHAGL+ +G + F M+ Y + P IEHY C+VDL GRSG+L++A +FI QMPI
Sbjct: 380 ACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTA 439
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRL 661
++W LL A +IE+ E+ ++L LDPN V+LSN YA G+W +IRK +
Sbjct: 440 IVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 499
Query: 662 QSLELRKDPGCSWIELNNNIHMFSVEDK 689
++K S +E+ ++ F+ +K
Sbjct: 500 IVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 190/421 (45%), Gaps = 44/421 (10%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFMHRSCVKLNEISFSAVLS 111
L AR + P +NT++ GYS+ ++A+ M + V + SF+ V+
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 112 SCARSGSLFLGKQVHSLLLKSGFEKFGLVGS----------------------------- 142
+ SL G Q+H LK G E VG+
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 143 --ALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV 200
A++ C R + A +F+++ NH W++ML+GY++ + +A +F +MP RD
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 201 VAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
V+W+T+I G A E L FR ++R+ + PNE +L V+ C++ G+ GK++HG
Sbjct: 235 VSWSTMIVGIAHNGSFNESFL-YFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG 293
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
K G + S+ AL + Y + A+ V+E M + C+ S+I GL + G+ E
Sbjct: 294 FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
Query: 321 EA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTSLNT 370
EA E+ YG+ + IS+ ++ + + IE+ + F +M +
Sbjct: 354 EAVRLFNEMTAYGV-TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGC 412
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
M+ +Y ++G+L +A + ++ W +++ +G A ++ + L ++
Sbjct: 413 MVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNN 472
Query: 431 S 431
S
Sbjct: 473 S 473
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 34/298 (11%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
S N+ +A K GEL A+ +F EMP R SW+TMI G + G ++E+ + R+
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAE 158
+ NE+S + VLS+C++SGS GK +H + K+G+ V +AL+ RC + A
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMAR 324
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE 218
LVFE +++ R +V+WT++I+G A G E
Sbjct: 325 LVFEGMQEK------------------------------RCIVSWTSMIAGLAMHGQG-E 353
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG--GA 276
A+ LF M V P+ + ++ C+ G + G+ +K + I G
Sbjct: 354 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSE-MKRVYHIEPEIEHYGC 412
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
+ + Y + A M V +L+G G IE AE + L E +P
Sbjct: 413 MVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDP 470
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 199/682 (29%), Positives = 322/682 (47%), Gaps = 43/682 (6%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS-WNTMISGYSQWGRYDEALALA 91
+H N ++ AK +L+ AR +FD + + WN+++S YS G+ E L L
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-VGSALLYFCVR 150
MH + N + + L++C LGK++H+ +LKS L V +AL+ R
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 151 CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY 210
C + +AE + + M NA DVV W +LI GY
Sbjct: 333 CGKMPQAERILRQ---------------------MNNA----------DVVTWNSLIKGY 361
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
+ E AL+ F M + +E ++ +I RL L AG +H IK G D +
Sbjct: 362 VQNLMYKE-ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
+G L + Y + R + M + ++ + G +E EL +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 331 ETNPISYNLMIKGYAMSSQIEKS----KRLFEKMAPKNLTSL---NTMISVYSKNGELDE 383
+ I +++ +S + KS K + + K L N ++ VY K +
Sbjct: 481 KRMEID-EMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
A ++F+ KG ++ V+W SM+S NG SEA++L+ M + + A
Sbjct: 540 ATRVFESIKG-KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA 503
SL + +G+ +H +L + F + A+VD Y+ CG L A+ F I + +T+
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
+IN Y HG G ++ LF M + V P+ +F+A+L ACSHAGLL++G M+ Y
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 564 RVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERA 623
+ P EHY C+VD+LGR+ + EA EF+ M E +W ALL A + E+GE A
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 624 AEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHM 683
A++L L+P V++SN++A GRW +R ++++ + K PGCSWIE++ +H
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838
Query: 684 FSVEDKTHAYSDVIYATVDHLT 705
F+ DK+H S IY + +T
Sbjct: 839 FTARDKSHPESKEIYEKLSEVT 860
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 262/584 (44%), Gaps = 71/584 (12%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G L +A +FDEMP RT +WNTMI Y G ALAL M V L SF A
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD-G 167
+L +CA+ + G ++HSLL+K G+ G + +AL+ + + A +F+ ++ G
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ VLW+ +LS Y G +++ L+LFR M
Sbjct: 248 DAVLWNSILSSY---STSGKSLE-----------------------------TLELFREM 275
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN-SIGGALAEFYCDRDA 286
+ PN +T+ + C GK +H +K + AL Y
Sbjct: 276 HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK 335
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAM 346
+ A+R+ M A + NSLI G + +EA F ++ I+ +M
Sbjct: 336 MPQAERILRQMNN-ADVVTWNSLIKGYVQNLMYKEALEFF-----SDMIAAGHKSDEVSM 389
Query: 347 SSQIEKSKRLFEKMA-------------PKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
+S I S RL +A NL NT+I +YSK + F +
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH- 448
Query: 394 ERNSVTWNSMMSGYIHNGQHSEALKLY--VTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
+++ ++W ++++GY N H EAL+L+ V +R+ +D + RA + L S
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE--MILGSILRASSVLKSMLIV 506
Query: 452 QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYH 511
+ +H H+ + V + LVD Y KC ++ A R F SI +V +WT++I+ A +
Sbjct: 507 KEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALN 565
Query: 512 GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY--RVTPTI 569
G SE++ LFR M+ G+ ++ + ILSA + LN G EI CY R +
Sbjct: 566 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH-----CYLLRKGFCL 620
Query: 570 EH--YTCVVDLLGRSGRLKEAEEFINQMPIEADGVI-WGALLNA 610
E VVD+ G L+ A+ ++ IE G++ + +++NA
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDR--IERKGLLQYTSMINA 662
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 197/451 (43%), Gaps = 45/451 (9%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL--VGSALLYFCVRCCGIGEAELVFE 162
+F+ VL C + ++ G+Q+HS + K+ F F L + L++ +C + +AE VF+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALD 222
E+ D W+ M+ YV +A+ L+ M R +G L
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-----------------RVEGVPLGLS 183
Query: 223 LFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC 282
F + ++ CA+L + +G +H L +K G I AL Y
Sbjct: 184 SFPAL---------------LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 228
Query: 283 DRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI--SYNLM 340
D + A+R+++ + + NS++ G+ E +F + T P SY ++
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 341 IK-------GYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
YA + + L L N +I++Y++ G++ +A ++ +
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL-RQMN 347
Query: 394 ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQL 453
+ VTWNS++ GY+ N + EAL+ + M + + + A L + G
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
LHA++ K + +N+ VG L+D YSKC R+F + ++ +WT +I GYA +
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 514 GSESILLFRSMLVQGVLPNAATFVAILSACS 544
E++ LFR + + + + +IL A S
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 8/272 (2%)
Query: 342 KGYAMSSQIEKSKRLFEKMAPKNLTSL-NTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
K A+S + R+F+ L L ++ +Y K G LD+A K+FD+ +R + W
Sbjct: 92 KRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP-DRTAFAW 150
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
N+M+ Y+ NG+ + AL LY MR V S+F L +AC L + G LH+ L K
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 210
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA-WTALINGYAYHGLGSESIL 519
+ + ++ ALV Y+K L+ A+R F A W ++++ Y+ G E++
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC--VVD 577
LFR M + G PN+ T V+ L+AC G EI S + T + E Y C ++
Sbjct: 271 LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS--VLKSSTHSSELYVCNALIA 328
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
+ R G++ +AE + QM AD V W +L+
Sbjct: 329 MYTRCGKMPQAERILRQMN-NADVVTWNSLIK 359
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 218/499 (43%), Gaps = 59/499 (11%)
Query: 30 SEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALA 89
S H + N IA + G++ +A + +M V +WN++I GY Q Y EAL
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
S M + K +E+S ++++++ R +L G ++H+ ++K G++ VG+ L+
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYS 432
Query: 150 RC---CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL 206
+C C +G A F + D + + W+ +++GY Q D A++LF RDV
Sbjct: 433 KCNLTCYMGRA---FLRMHDKDLISWTTVIAGYAQNDCHVEALELF-----RDVAK---- 480
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
+R E+ +E L ++R + L ++ K +H ++ G
Sbjct: 481 ---------------------KRMEI--DEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF 326
L D I L + Y + A RV+ES+ G+ ++ S+I L G EA +F
Sbjct: 518 L-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGNESEAVELF 575
Query: 327 YGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTM----ISVYSKN 378
+ ET + ++ ++ A S + K + + + K ++ + +Y+
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACC 635
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL 438
G+L A +FD+ + + + + SM++ Y +G A++L+ MR +V +F L
Sbjct: 636 GDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694
Query: 439 FRACTSLCSFQQG----QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
AC+ +G +++ P+ + YV LVD + + +A F +
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPWPEH-YV--CLVDMLGRANCVVEA-FEFVKMM 750
Query: 495 S--PNVAAWTALINGYAYH 511
P W AL+ H
Sbjct: 751 KTEPTAEVWCALLAACRSH 769
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/665 (27%), Positives = 311/665 (46%), Gaps = 99/665 (14%)
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGF-EKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+L SC+ L +Q + LLLK GF +V + LL R +G A +F+E+ D
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N+ W+ M+ GY+ G ++ F MP RD +W ++SG+A+ + A LF M
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGE-LSVARRLFNAM 150
Query: 228 RRSEVL----------------------------PNEFTLDCVIRICARLGALHAGKVVH 259
+V+ + TL V++ CA L AL GK +H
Sbjct: 151 PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIH 210
Query: 260 GLCIKDGLDFDNSIGGALAEFYCD--------------RDAID-----------DAKRVY 294
+ G++ D+ + +L Y R+ D + RV
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVN 270
Query: 295 ESMG-----GEACLNVANSLIGGLILMGRIEEAELIFYGLR-ETNPISYNL--------- 339
ES G C+ + NS+I G I EA ++F +R ET S L
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIG 330
Query: 340 ----------------------------MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTM 371
++ Y+ ++ +LF ++ + LN+M
Sbjct: 331 LGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSM 390
Query: 372 ISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
I VY G +D+A ++F++ + ++ ++WNSM +G+ NG E L+ + M +L +
Sbjct: 391 IKVYFSCGRIDDAKRVFERIEN-KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTD 449
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
+ S + AC S+ S + G+ + A + ++ V ++L+D Y KCG + +R F
Sbjct: 450 EVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD 509
Query: 492 SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
++ + W ++I+GYA +G G E+I LF+ M V G+ P TF+ +L+AC++ GL+ +
Sbjct: 510 TMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEE 569
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNAS 611
G ++F SM++ + P EH++C+VDLL R+G ++EA + +MP + DG +W ++L
Sbjct: 570 GRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGC 629
Query: 612 WFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPG 671
+G++AAEK+ L+P +V LS ++A G W +RK ++ + K+PG
Sbjct: 630 VANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPG 689
Query: 672 CSWIE 676
SW +
Sbjct: 690 SSWTD 694
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 243/517 (47%), Gaps = 52/517 (10%)
Query: 39 STNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
S N+ ++ AK GEL+ AR +F+ MP + V + N+++ GY G +EAL L ++ S
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA 185
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAE 158
+ I+ + VL +CA +L GKQ+H+ +L G E + S+L+ +C + A
Sbjct: 186 ---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE 218
+ E++R+ + S ++SGY + + LF + R V+ W ++ISGY E
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
AL LF M R+E + TL VI C LG L GK +H K GL D + L
Sbjct: 303 -ALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 279 EFY---------------------------------CDRDAIDDAKRVYESMGGEACLNV 305
+ Y C R IDDAKRV+E + ++ ++
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR--IDDAKRVFERIENKSLIS- 417
Query: 306 ANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMA 361
NS+ G G E F+ + + T+ +S + +I A S +E +++F +
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 362 PKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEAL 417
L S +++I +Y K G ++ ++FD T + + V WNSM+SGY NGQ EA+
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD-TMVKSDEVPWNSMISGYATNGQGFEAI 536
Query: 418 KLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS-KTPFQANVYVGTALVDF 476
L+ M + ++ TF V+ AC ++G+ L + F + + +VD
Sbjct: 537 DLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDL 596
Query: 477 YSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
++ G++ +A + F + + W++++ G +G
Sbjct: 597 LARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 13 CCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWN 72
C +E +LF SE I N I G + +A+ +F+ + +++ SWN
Sbjct: 366 CGSPMEACKLF------SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 73 TMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKS 132
+M +G+SQ G E L MH+ + +E+S S+V+S+CA SL LG+QV +
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV 479
Query: 133 GFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLF 192
G + +V S+L+ +C + VF+ + + V W+ M+SGY A+DLF
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLF 539
Query: 193 GKMPVRDV--VAWTTLISGYARREDG-CERALDLFRCMRRSE-VLPNEFTLDCVIRICAR 248
KM V + T ++ A G E LF M+ +P++ C++ + AR
Sbjct: 540 KKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLAR 599
Query: 249 LGALHAGKVVHGLCIKDGLDFD 270
AG V + + + + FD
Sbjct: 600 -----AGYVEEAINLVEEMPFD 616
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 290/528 (54%), Gaps = 30/528 (5%)
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPV--RDVVAWTTLISGYARREDGC-ERALDLFRC 226
VL S + + Y+Q + + A F ++P R+ +W T++SGY++ + C L L+
Sbjct: 40 VLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNR 99
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
MRR + F L I+ C LG L G ++HGL +K+GLD D+ + +L E Y
Sbjct: 100 MRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGT 159
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIE-----EAELIFYGLRET----NPISY 337
++ A++V++ + V NS++ G+++ G ++ E +F +R+T + ++
Sbjct: 160 MESAQKVFDE------IPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTL 213
Query: 338 NLMIK--GYAMSSQIEKS------KRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
++K G + ++ K +R F + S+ I +Y K LD A KLF+
Sbjct: 214 ICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI---IDMYVKCRLLDNARKLFE 270
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
T +RN V W +++SG+ + EA L+ M R S+ ++ T + + +C+SL S +
Sbjct: 271 -TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
G+ +H ++ + + + T+ +D Y++CG++ A+ F + NV +W+++IN +
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
+GL E++ F M Q V+PN+ TFV++LSACSH+G + +G + F SM Y V P
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
EHY C+VDLLGR+G + EA+ FI+ MP++ WGALL+A K++++ AEKL S
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIEL 677
++P S +V+LSN+YA G W +R+++ RK G S E+
Sbjct: 510 MEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 43/369 (11%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A+ G + A+ +FDE+P+R W ++ GY ++ + E L M + + L+ ++
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++ +C + +GK VH + ++ F D
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSF------------------------------IDQ 244
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ L + ++ YV+ ++ NA LF R+VV WTTLISG+A+ E E A DLFR M
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE-AFDLFRQM 303
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R +LPN+ TL ++ C+ LG+L GK VHG I++G++ D + + Y I
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKG 343
A+ V++ M ++ + S+I + G EEA F+ ++ N +++ ++
Sbjct: 364 QMARTVFDMMPERNVISWS-SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 344 YAMSSQIEKSKRLFEKMA------PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
+ S +++ + FE M P+ M+ + + GE+ EA D + +
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEE-EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481
Query: 398 VTWNSMMSG 406
W +++S
Sbjct: 482 SAWGALLSA 490
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 213/492 (43%), Gaps = 77/492 (15%)
Query: 49 KTGELAEARHMFDEMPL--RTVSSWNTMISGYSQWGR--YDEALALASFMHRSCVKLNEI 104
++ L A F+ +P R SWNT++SGYS+ Y + L L + M R C ++
Sbjct: 51 QSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSF 110
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+ + +C G L G +H L +K+G +K V +L+ + + A+ VF+E+
Sbjct: 111 NLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEI 170
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
N VLW +++ GY++ + K P LF
Sbjct: 171 PVRNSVLWGVLMKGYLK----------YSKDP----------------------EVFRLF 198
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDNSIGGALAEFYCD 283
MR + + + TL C+++ C + A GK VHG+ I+ +D + + ++ + Y
Sbjct: 199 CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVK 258
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-ELIFYGLRET---------- 332
+D+A++++E+ + + +LI G R EA +L LRE+
Sbjct: 259 CRLLDNARKLFETSVDRNVV-MWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAA 317
Query: 333 --------NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEA 384
+ + + GY + + IE M N TS I +Y++ G + A
Sbjct: 318 ILVSCSSLGSLRHGKSVHGYMIRNGIE--------MDAVNFTSF---IDMYARCGNIQMA 366
Query: 385 VKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
+FD ERN ++W+SM++ + NG EAL + M+ +V + TF L AC+
Sbjct: 367 RTVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 445 LCSFQQGQLLHAHLSK----TPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVA 499
+ ++G +++ P + + +VD + G + +A+ ++ P +
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHY---ACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 500 AWTALINGYAYH 511
AW AL++ H
Sbjct: 483 AWGALLSACRIH 494
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/593 (28%), Positives = 290/593 (48%), Gaps = 56/593 (9%)
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF--- 224
++ L S ++S Y ++D A+ +F ++ VR+ ++ L+ Y RE + A LF
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFD-AFSLFLSW 114
Query: 225 ---RCMRRSEVLPNEFTLDCVIRICAR-----LGALHAGKVVHGLCIKDGLDFDNSIGGA 276
C P+ ++ CV++ + LG+L + VHG I+ G D D +G
Sbjct: 115 IGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIRGGFDSDVFVGNG 172
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR-----E 331
+ +Y D I+ A++V++ M ++ NS+I G G E+ + ++ + +
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVS-WNSMISGYSQSGSFEDCKKMYKAMLACSDFK 231
Query: 332 TNPISYNLMIKGYAMSSQI----EKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL 387
N ++ + + SS + E K++ E +L+ N +I Y+K G LD A L
Sbjct: 232 PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 388 FDKTKGERNSVT-------------------------------WNSMMSGYIHNGQHSEA 416
FD+ E++SVT WN+M+SG + N H E
Sbjct: 292 FDEMS-EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 417 LKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
+ + M R + T S L + T + + G+ +HA + N+YV T+++D
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 477 YSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
Y+K G L AQR F + ++ AWTA+I YA HG + LF M G P+ T
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 537 VAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
A+LSA +H+G + IF SM Y + P +EHY C+V +L R+G+L +A EFI++MP
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Query: 597 IEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTT 656
I+ +WGALLN + D+E+ A ++LF ++P + I++N+Y GRW +
Sbjct: 531 IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 657 IRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATIN 709
+R +++ + L+K PG SWIE + F +D + S +Y ++ L +++
Sbjct: 591 VRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMS 643
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 184/380 (48%), Gaps = 12/380 (3%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V N I + K + AR +FDEM R V SWN+MISGYSQ G +++ + M
Sbjct: 167 VFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLA 226
Query: 97 -SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
S K N ++ +V +C +S L G +VH ++++ + + +A++ F +C +
Sbjct: 227 CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLD 286
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
A +F+E+ + + V + ++SGY+ ++ AM LF +M + W +ISG + +
Sbjct: 287 YARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQN-N 345
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
E ++ FR M R PN TL ++ L GK +H I++G D + +
Sbjct: 346 HHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTT 405
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----E 331
++ + Y + A+RV+++ + L ++I + G + A +F ++ +
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRS-LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTK 464
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVK 386
+ ++ ++ +A S + ++ +F+ M K + M+SV S+ G+L +A++
Sbjct: 465 PDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAME 524
Query: 387 LFDKTKGERNSVTWNSMMSG 406
K + + W ++++G
Sbjct: 525 FISKMPIDPIAKVWGALLNG 544
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 281/550 (51%), Gaps = 20/550 (3%)
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS-EVL 233
+++ YV+ A LF MP R+VV+W ++ GY E L LF+ M S E
Sbjct: 75 LINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFE-VLKLFKSMFFSGESR 133
Query: 234 PNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRV 293
PNEF V + C+ G + GK HG +K GL + L Y +A RV
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 294 YESMGGEAC-LNVANSLIGGLILMGRIEEAELIFYGLRET-------NPISYNLMIKGYA 345
+ + C L+V +S + G + G +E + LR+T N ++Y ++ ++
Sbjct: 194 LDDL--PYCDLSVFSSALSGYLECGAFKEGLDV---LRKTANEDFVWNNLTYLSSLRLFS 248
Query: 346 MSSQIEKSKRLFEKMA----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
+ + ++ +M + + +I++Y K G++ A ++FD T + N
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ-NIFLNT 307
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
++M Y + EAL L+ M V + TF++L + L +QG LLH + K+
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLF 521
++ +V VG ALV+ Y+K G + DA+++F+ + ++ W +I+G ++HGLG E++ F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAF 427
Query: 522 RSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGR 581
M+ G +PN TF+ +L ACSH G + GL F+ + + V P I+HYTC+V LL +
Sbjct: 428 DRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSK 487
Query: 582 SGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVIL 641
+G K+AE+F+ PIE D V W LLNA + ++ +G++ AE PN +V+L
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLL 547
Query: 642 SNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATV 701
SN++A W +R + + ++K+PG SWI + N H+F ED H +IYA V
Sbjct: 548 SNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKV 607
Query: 702 DHLTATINSI 711
+ + I +
Sbjct: 608 KEVMSKIKPL 617
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 210/507 (41%), Gaps = 57/507 (11%)
Query: 24 TTLLRDSEPHHPHVISTNIS------------IAHRAKTGELAEARHMFDEMPLRTVSSW 71
++ LR E H H+I TN S I K E AR +FD MP R V SW
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSW 103
Query: 72 NTMISGYSQWGRYDEALALASFMHRSC-VKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
M+ GY G E L L M S + NE + V SC+ SG + GKQ H L
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFL 163
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
K G V + L+Y C G GEA V ++L + ++S LSGY++ +D
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+ K D V W N T +R+ + L
Sbjct: 224 VLRKTANEDFV-W-------------------------------NNLTYLSSLRLFSNLR 251
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
L+ VH ++ G + + GAL Y + A+RV++ + + +++
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIF-LNTTIM 310
Query: 311 GGLILMGRIEEAELIFYGL--RETNPISYNLM-----IKGYAMSSQIEKSKRLFEKMAPK 363
EEA +F + +E P Y I ++ Q + L K +
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 364 NLTSL-NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
N + N ++++Y+K+G +++A K F R+ VTWN+M+SG H+G EAL+ +
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTF-RDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
M +R TF + +AC+ + +QG + + K Q ++ T +V SK G
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 482 HLADAQRSF-TSIFSPNVAAWTALING 507
DA+ T+ +V AW L+N
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 438 LFRACTSLCSFQQGQLLHAHL---SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
L + C + + G+ +HAHL +++ + Y +L++ Y KC A++ F +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGL 553
NV +W A++ GY G E + LF+SM G PN + +CS++G + +G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 554 EIFH 557
+ FH
Sbjct: 157 Q-FH 159
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 188/687 (27%), Positives = 328/687 (47%), Gaps = 55/687 (8%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V +N + K G A +F+ + V SWNT++SG+ AL M
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVVRMKS 167
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
+ V + ++S LS C S LG Q+ S ++K+G E +VG++ + R
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A VF+E M +D+++W +L+SG ++
Sbjct: 228 ARRVFDE-------------------------------MSFKDMISWNSLLSGLSQEGTF 256
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
A+ +FR M R V + + VI C L + +HGLCIK G + +G
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ET 332
L Y ++ K V+ M N + ++ ++A IF +R
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSER------NVVSWTTMISSNKDDAVSIFLNMRFDGVYP 370
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL----NTMISVYSKNGELDEAVKLF 388
N +++ +I + QI++ ++ S N+ I++Y+K L++A K F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR-ACTSLCS 447
+ R ++WN+M+SG+ NG EALK++++ ++ + + SVL A S
Sbjct: 431 EDITF-REIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDIS 489
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
+QGQ HAHL K + V +AL+D Y+K G++ ++++ F + N WT++I+
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
Y+ HG + LF M+ + V P+ TF+++L+AC+ G+++ G EIF+ M Y + P
Sbjct: 550 YSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEP 609
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL 627
+ EHY+C+VD+LGR+GRLKEAEE ++++P + ++L + ++++G + AE
Sbjct: 610 SHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELA 669
Query: 628 FSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNN-----NIH 682
+ P +V + N+YA W + IRK ++ + K+ G SWI++ + +
Sbjct: 670 MEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQ 729
Query: 683 MFSVEDKTHAYSDVIYATVDHLTATIN 709
FS DK+H SD IY V+ + +N
Sbjct: 730 GFSSGDKSHPKSDEIYRMVEIIGLEMN 756
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 200/462 (43%), Gaps = 62/462 (13%)
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
+E TL ++ C G L G +HG G + A+ Y D+A ++
Sbjct: 77 DEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 295 ESMGGEACLNVANSLIGG-------LILMGRIEEAELIFYGLRETNPISYNLMIKGYAMS 347
E++ ++ N+++ G L + R++ A ++F + +S+ + +G+ +
Sbjct: 135 ENLVDPDVVS-WNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLG 193
Query: 348 SQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY 407
Q++ + + + +L N+ I++YS++G A ++FD+ ++ ++WNS++SG
Sbjct: 194 LQLQST--VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGL 250
Query: 408 IHNGQHS-EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
G EA+ ++ M R V+ +F+ + C + + +H K +++
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 310
Query: 467 VYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLV 526
+ VG L+ YSKCG L + F + NV +WT +I+ +++ +F +M
Sbjct: 311 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRF 365
Query: 527 QGVLPNAATFVAILSACSHAGLLNDGLEI-------------------------FHSMQI 561
GV PN TFV +++A + +GL+I F +++
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED 425
Query: 562 CYRVTPTIE-----HYTCVVDLLGRSGRLKEAEEFI-----NQMPIEADGVIWGALLNAS 611
+ I + ++ ++G EA + MP E +G++LNA
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE---YTFGSVLNAI 482
Query: 612 WFWKDIEV--GERAAEKLFSLDPN--PISGFVILSNMYAILG 649
F +DI V G+R L L N P+ +L +MYA G
Sbjct: 483 AFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALL-DMYAKRG 523
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 10/230 (4%)
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV---DHSRSTFSVLFR 440
A KLFD + + + N +S + + AL ++ +L T + +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 441 ACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA 500
AC ++G +H + + F + V V A++ Y K G +A F ++ P+V +
Sbjct: 87 ACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 501 WTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
W +++G+ + + ++ +S GV+ +A T+ LS C + GL++ S
Sbjct: 145 WNTILSGFDDNQIALNFVVRMKS---AGVVFDAFTYSTALSFCVGSEGFLLGLQL-QSTV 200
Query: 561 ICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ + + + + RSG + A ++M + D + W +LL+
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSG 249
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/695 (28%), Positives = 332/695 (47%), Gaps = 43/695 (6%)
Query: 22 LFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQW 81
L L S H +++ +S + E R +FD M + V +WNT+IS Y +
Sbjct: 133 LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 82 GRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVG 141
GR EA M R VK + +SF V + + S S+ + L+LK G E
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDE------ 246
Query: 142 SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV 201
+ + A ++ EL D + ++ +F R++
Sbjct: 247 -----YVKDLFVVSSAISMYAELGD------------------IESSRRVFDSCVERNIE 283
Query: 202 AWTTLISGYARREDGCERALDLF-RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
W T+I Y + D +++LF + E++ +E T + L + G+ HG
Sbjct: 284 VWNTMIGVYVQN-DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG 342
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
K+ + I +L Y ++ + V+ SM ++ N++I + G +
Sbjct: 343 FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS-WNTMISAFVQNGLDD 401
Query: 321 EAELIFYGLRETN-PISYNLMIKGYAMSS-----QIEKSKRLFEKMAPKNLTSLNT-MIS 373
E ++ Y +++ I Y + + +S +I K F +N+ +I
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLID 461
Query: 374 VYSKNGELDEAVKLFDKTK-GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSR 432
+YSK+G + + KLF+ + ER+ TWNSM+SGY NG + ++ M ++ +
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 433 STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
T + + AC+ + S G+ LH + NV+V +ALVD YSK G + A+ F+
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
N +T +I GY HG+G +I LF SM G+ P+A TFVA+LSACS++GL+++G
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Query: 553 LEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD-GVIWGALLNAS 611
L+IF M+ Y + P+ EHY C+ D+LGR GR+ EA EF+ + E + +WG+LL +
Sbjct: 642 LKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Query: 612 WFWKDIEVGERAAEKLFSLDPNP-ISGF-VILSNMYAILGRWGQKTTIRKRLQSLELRKD 669
++E+ E +E+L D SG+ V+LSNMYA +W +R+ ++ L+K+
Sbjct: 702 KLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKE 761
Query: 670 PGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
G S IE+ ++ F D+ H +S IY +D L
Sbjct: 762 VGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 158/635 (24%), Positives = 286/635 (45%), Gaps = 68/635 (10%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P S ++ + G AR +FD +P T WNT+I G+ EAL S M
Sbjct: 37 PQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM 96
Query: 95 HRSC--VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
++ + ++S+ L +CA + +L GK VH L++ +V ++L+ V C
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL 156
Query: 153 GIGE------AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL 206
+ VF+ +R N V W+ ++S YV+
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT------------------------ 192
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
R + C + F M R EV P+ + V + ++ V +GL +K G
Sbjct: 193 ----GRNAEACRQ----FGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 267 LDF--DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAEL 324
++ D + + Y + I+ ++RV++S E + V N++IG + + E+
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VERNIEVWNTMIGVYVQNDCLVESIE 303
Query: 325 IFY---GLRE--TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL-----NTMISV 374
+F G +E ++ ++Y L + Q+E R F KN L N+++ +
Sbjct: 304 LFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG-RQFHGFVSKNFRELPIVIVNSLMVM 362
Query: 375 YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRST 434
YS+ G + ++ +F + ER+ V+WN+M+S ++ NG E L L M++ T
Sbjct: 363 YSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF--TS 492
+ L A ++L + + G+ HA L + Q + + L+D YSK G + +Q+ F +
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
+ A W ++I+GY +G ++ L+FR ML Q + PNA T +IL ACS G ++ G
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 553 LEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASW 612
++ H I + + + +VD+ ++G +K AE+ +Q E + V + ++
Sbjct: 541 KQL-HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK-ERNSVTYTTMILG-- 596
Query: 613 FWKDIEVGERAAEKLFSLD-----PNPISGFVILS 642
+ +GERA S+ P+ I+ +LS
Sbjct: 597 -YGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 202/456 (44%), Gaps = 51/456 (11%)
Query: 2 ILFLRFCPVRNCCKRVEKFRLFTTL---LRDSEPHHPHVISTNISIAHRAKTGELAEARH 58
+ F+ P + + ++K +F L L D V+S+ IS+ A+ G++ +R
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMY--AELGDIESSRR 272
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEA--LALASFMHRSCVKLNEISFSAVLSSCARS 116
+FD R + WNTMI Y Q E+ L L + + V +E+++ S+ +
Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS-DEVTYLLAASAVSAL 331
Query: 117 GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLML 176
+ LG+Q H + K+ E ++ ++L+ RC + ++ VF +R+ + V W+ M+
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 177 SGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNE 236
S +VQ N +D G M V + M++ +
Sbjct: 392 SAFVQ-----NGLDDEGLMLVYE---------------------------MQKQGFKIDY 419
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
T+ ++ + L GK H I+ G+ F+ + L + Y I +++++E
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG 478
Query: 297 MG-GEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIE 351
G E NS+I G G E+ L+F + E N ++ ++ + ++
Sbjct: 479 SGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVD 538
Query: 352 KSKRL----FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY 407
K+L + +N+ + ++ +YSK G + A +F +TK ERNSVT+ +M+ GY
Sbjct: 539 LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK-ERNSVTYTTMILGY 597
Query: 408 IHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
+G A+ L+++M+ + TF + AC+
Sbjct: 598 GQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 361 APKNLT----SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEA 416
+P LT S+ + +S ++G A +LFD + +V WN+++ G+I N EA
Sbjct: 31 SPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIP-KPTTVLWNTIIIGFICNNLPHEA 89
Query: 417 LKLYVTMRRLS--VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
L Y M++ + + T+S +AC + + G+ +H HL + ++ V +L+
Sbjct: 90 LLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLM 149
Query: 475 DFYSKCGHLAD------AQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG 528
+ Y C + D ++ F ++ NV AW LI+ Y G +E+ F M+
Sbjct: 150 NMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME 209
Query: 529 VLPNAATFVAILSACS 544
V P+ +FV + A S
Sbjct: 210 VKPSPVSFVNVFPAVS 225
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/597 (27%), Positives = 297/597 (49%), Gaps = 48/597 (8%)
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGF-EKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
A L CA+ G+Q+H +++ GF + G++L+ +C + A LVF
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF----- 119
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
G +RD+ G + LISG+ + A++ +R
Sbjct: 120 -----------GGSERDVFG----------------YNALISGFVVNGSPLD-AMETYRE 151
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
MR + +LP+++T +++ + L K VHGL K G D D +G L Y +
Sbjct: 152 MRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMS 210
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIK 342
++DA++V++ + + N+L+ G + R E+A L+F +RE + + ++
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 343 GYAMSSQIEKSKRL----FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV 398
+ +S I+ + + + + ++ N +I +Y K+ L+EA +F+ ER+
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLF 329
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
TWNS++ + + G H L L+ M + T + + C L S +QG+ +H ++
Sbjct: 330 TWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Query: 459 SKTPF----QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
+ +N ++ +L+D Y KCG L DA+ F S+ + A+W +INGY G
Sbjct: 390 IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCG 449
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC 574
++ +F M GV P+ TFV +L ACSH+G LN+G M+ Y + PT +HY C
Sbjct: 450 ELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC 509
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNP 634
V+D+LGR+ +L+EA E PI + V+W ++L++ + ++ A ++L L+P
Sbjct: 510 VIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEH 569
Query: 635 ISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTH 691
G+V++SN+Y G++ + +R ++ ++K PGCSWI L N +H F ++TH
Sbjct: 570 CGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 175/387 (45%), Gaps = 14/387 (3%)
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDNSIGGALAEFYCDRDAIDDAKRV 293
N T ++ CA+ +G+ +HG ++ G LD G +L Y + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 294 YESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN--PISYNL--MIKGY-AMS- 347
+ G E + N+LI G ++ G +A + +R P Y ++KG AM
Sbjct: 119 FG--GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL 176
Query: 348 SQIEKSKRLFEKMAPKNLTSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
S ++K L K+ + + + +++ YSK +++A K+FD+ +SV WN++++G
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
Y + +AL ++ MR V SR T + + A T G+ +H KT ++
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 467 VYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLV 526
+ V AL+D Y K L +A F ++ ++ W +++ + Y G ++ LF ML
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 527 QGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC---YRVTPTIEHYTCVVDLLGRSG 583
G+ P+ T +L C L G EI M + R + + ++D+ + G
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG 416
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNA 610
L++A + M ++ D W ++N
Sbjct: 417 DLRDARMVFDSMRVK-DSASWNIMING 442
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 203/497 (40%), Gaps = 90/497 (18%)
Query: 48 AKTGELAEARHMFDEMPLRTVSS-WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISF 106
+K + +A+ +FDE+P R S WN +++GYSQ R+++AL + S M V ++ +
Sbjct: 206 SKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTI 265
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
++VLS+ SG + G+ +H L +K+G +V +AL+ + + EA +FE
Sbjct: 266 TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFE---- 321
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL--ISGYARREDGCERALDLF 224
AMD RD+ W ++ + Y DG L LF
Sbjct: 322 ---------------------AMD------ERDLFTWNSVLCVHDYCGDHDG---TLALF 351
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
M S + P+ TL V+ C RL +L G+ +HG I GL S EF
Sbjct: 352 ERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN----EF---- 403
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGY 344
+ NSL+ + G + +A ++F +R + S+N+MI GY
Sbjct: 404 --------------------IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 345 AMSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
+ S E + +F M P +T + ++ S +G L+E + + N +
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVG-LLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ--------QG 451
+ + I ++ L+ L++ V++R+ S C G
Sbjct: 503 TSDHYACVIDMLGRADKLE---EAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAG 559
Query: 452 QLLH----AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
+ LH H +NVYV Y + + DA R +P +W L NG
Sbjct: 560 KRLHELEPEHCGGYVLMSNVYVEAGK---YEEVLDVRDAMRQQNVKKTPG-CSWIVLKNG 615
Query: 508 YAYHGLGSESILLFRSM 524
G+++ F+S+
Sbjct: 616 VHTFFTGNQTHPEFKSI 632
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 199/471 (42%), Gaps = 68/471 (14%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
R V +N +ISG+ G +A+ M + + ++ +F ++L + + L K+V
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKV 182
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD-GNHVLWSLMLSGYVQRDM 184
H L K GF+ VGS L+ + + +A+ VF+EL D + VLW+ +++GY Q
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 185 MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
+A+ +F KM RE+G V + T+ V+
Sbjct: 243 FEDALLVFSKM-----------------REEG---------------VGVSRHTITSVLS 270
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
G + G+ +HGL +K G D + AL + Y +++A ++E+M E L
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM-DERDLF 329
Query: 305 VANSLI----------GGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSK 354
NS++ G L L R ++ G+R + ++ ++ + + + +
Sbjct: 330 TWNSVLCVHDYCGDHDGTLALFER-----MLCSGIR-PDIVTLTTVLPTCGRLASLRQGR 383
Query: 355 RLFEKMAPKNLTSL--------NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+ M L + N+++ +Y K G+L +A +FD + ++S +WN M++G
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR-VKDSASWNIMING 442
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT----P 462
Y AL ++ M R V TF L +AC+ +G+ A + P
Sbjct: 443 YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 463 FQANVYVGTALVDFYSKCGHLADA-QRSFTSIFSPNVAAWTALINGYAYHG 512
+ ++D + L +A + + + N W ++++ HG
Sbjct: 503 TSDHY---ACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHG 550
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 40/226 (17%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
++ +N I K+ L EA +F+ M R + +WN+++ + G +D LAL M
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGF----EKFGLVGSALLYFCVRCC 152
S ++ + ++ + VL +C R SL G+++H ++ SG + ++L+ V+C
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG 416
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGY-VQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
+ +A +VF+ +R + W++M++GY VQ
Sbjct: 417 DLRDARMVFDSMRVKDSASWNIMINGYGVQ------------------------------ 446
Query: 212 RREDGC-ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
C E ALD+F CM R+ V P+E T +++ C+ G L+ G+
Sbjct: 447 ----SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGR 488
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF-QANVYVGTALVDFYSKCGHLADAQR 488
H+ +T + C + GQ +H + + F + GT+LV+ Y+KCG + A
Sbjct: 58 HNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVL 117
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F +V + ALI+G+ +G +++ +R M G+LP+ TF ++L S A
Sbjct: 118 VFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAME 175
Query: 549 LNDGLEIFHSMQI-------CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
L+D ++ H + CY + + Y+ + +++A++ +++P D
Sbjct: 176 LSD-VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMS-------VEDAQKVFDELPDRDDS 227
Query: 602 VIWGALLNA 610
V+W AL+N
Sbjct: 228 VLWNALVNG 236
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 282/520 (54%), Gaps = 26/520 (5%)
Query: 199 DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVV 258
DV +W ++I+ AR D E AL F MR+ + P + C I+ C+ L + +GK
Sbjct: 40 DVFSWNSVIADLARSGDSAE-ALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 259 HGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGR 318
H G D + AL Y ++DA++V++ + ++ S+I G L G
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS-WTSMIRGYDLNGN 157
Query: 319 IEEAELIFYGLR-ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL--------- 368
+A +F L + N + + + S I R+ K +++ S
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 369 ----NTMISVYSKNGELDEAV--KLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
NT++ Y+K GE AV K+FD+ +++ V++NS+MS Y +G +EA +++
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIV-DKDRVSYNSIMSVYAQSGMSNEAFEVF-- 274
Query: 423 MRRLS----VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYS 478
RRL V + T S + A + + + G+ +H + + + +V VGT+++D Y
Sbjct: 275 -RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
KCG + A+++F + + NV +WTA+I GY HG ++++ LF +M+ GV PN TFV+
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+L+ACSHAGL +G F++M+ + V P +EHY C+VDLLGR+G L++A + I +M ++
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIR 658
D +IW +LL A K++E+ E + +LF LD + +++LS++YA GRW +R
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 659 KRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
+++ L K PG S +ELN +H+F + D+ H + IY
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIY 553
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 173/375 (46%), Gaps = 53/375 (14%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM------HRSCVKLNEI 104
G+L +AR +FDE+P R + SW +MI GY G +A++L + + L+ +
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALL--YFCVRCCGIGEAELVFE 162
+V+S+C+R + L + +HS ++K GF++ VG+ LL Y G+ A +F+
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALD 222
++ D + V ++ ++S Y Q M A ++F ++ VV +
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTF------------------- 285
Query: 223 LFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC 282
N TL V+ + GAL GK +H I+ GL+ D +G ++ + YC
Sbjct: 286 ------------NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 283 DRDAIDDAKRVYESMGGEACLNVAN--SLIGGLILMGRIEEAELIFYGLRET----NPIS 336
++ A++ ++ M + NV + ++I G + G +A +F + ++ N I+
Sbjct: 334 KCGRVETARKAFDRMKNK---NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKT 391
+ ++ + + + R F M + L M+ + + G L +A L +
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 392 KGERNSVTWNSMMSG 406
K + +S+ W+S+++
Sbjct: 451 KMKPDSIIWSSLLAA 465
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 98/174 (56%), Gaps = 6/174 (3%)
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
++ E LF++ + + +WNS+++ +G +EAL + +MR+LS+ +RS+F
Sbjct: 21 RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+AC+SL G+ H +Q++++V +AL+ YS CG L DA++ F I
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF------VAILSACS 544
N+ +WT++I GY +G +++ LF+ +LV + A F V+++SACS
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 205/486 (42%), Gaps = 54/486 (11%)
Query: 46 HRAKTGELAEARHMFDEMPLRT-VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEI 104
H + E +F+ +T V SWN++I+ ++ G EAL S M + +
Sbjct: 18 HTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS 77
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
SF + +C+ +F GKQ H G++ V SAL+ C + +A VF+E+
Sbjct: 78 SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
P R++V+WT++I GY + + A+ LF
Sbjct: 138 -------------------------------PKRNIVSWTSMIRGYDLNGNALD-AVSLF 165
Query: 225 RCMRRSE------VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
+ + E + + L VI C+R+ A + +H IK G D S+G L
Sbjct: 166 KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLL 225
Query: 279 EFYCD--RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS 336
+ Y + A+++++ + + ++ NS++ G EA +F L + ++
Sbjct: 226 DAYAKGGEGGVAVARKIFDQIVDKDRVSY-NSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 337 YN-------LMIKGYAMSSQIEK--SKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL 387
+N L+ ++ + +I K ++ ++ ++I +Y K G ++ A K
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
FD+ K +N +W +M++GY +G ++AL+L+ M V + TF + AC+
Sbjct: 345 FDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403
Query: 448 FQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALI 505
+G + +A + + + +VD + G L A + P+ W++L+
Sbjct: 404 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Query: 506 NGYAYH 511
H
Sbjct: 464 AACRIH 469
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
++ T+I I K G + AR FD M + V SW MI+GY G +AL L M
Sbjct: 323 IVGTSI-IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 97 SCVKLNEISFSAVLSSCARSG 117
S V+ N I+F +VL++C+ +G
Sbjct: 382 SGVRPNYITFVSVLAACSHAG 402
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 314/623 (50%), Gaps = 49/623 (7%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G + A+ +FDEMP R WN +I GYS+ G +A L M + + +
Sbjct: 97 KKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVN 156
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
+L C + G + G+ VH + KSG E V +AL+ F +C +G AE++F E++D +
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTLISGYARREDGCERALDLF 224
V W+ M+ Y Q + A+ +F M ++V V L+S + E
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP--------L 268
Query: 225 RCMRRSEVLPNEFTLDCVIRICA--RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC 282
C+ + N+ ++ + +CA R G L + + ++ +D SI G + C
Sbjct: 269 HCLVVKCGMVNDISVVTSL-VCAYSRCGCLVSAERLYASAKQD------SIVGLTSIVSC 321
Query: 283 DRDAID-DAKRVYESMGGEACLNV-ANSLIGGLILMGRIEEAELIFYGLRETNPISYNLM 340
+ D D VY S + C+ + A +L+G I +G ++++ I +
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVG-------------ILHGCKKSSHIDIGMS 368
Query: 341 IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
+ GYA+ S + K L +N +I++YSK +++ + LF++ + E ++W
Sbjct: 369 LHGYAIKS----------GLCTKTLV-VNGLITMYSKFDDVETVLFLFEQLQ-ETPLISW 416
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRL-SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
NS++SG + +G+ S A +++ M + T + L C+ LC G+ LH +
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
+ F+ +V TAL+D Y+KCG+ A+ F SI +P A W ++I+GY+ GL ++
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
+ M +G+ P+ TF+ +LSAC+H G +++G F +M + ++PT++HY +V LL
Sbjct: 537 CYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLL 596
Query: 580 GRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFV 639
GR+ EA I +M I+ D +WGALL+A +++EVGE A K+F LD +V
Sbjct: 597 GRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYV 656
Query: 640 ILSNMYAILGRWGQKTTIRKRLQ 662
++SN+YA W +R ++
Sbjct: 657 LMSNLYATEAMWDDVVRVRNMMK 679
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 221/522 (42%), Gaps = 45/522 (8%)
Query: 96 RSCVKLNEISFSAVLSSCARSGSLF--LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
RS + N + S L + S + F +QV + L KSG ++F V ++LL
Sbjct: 41 RSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNL------ 94
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
Y+++ + +A LF +MP RD V W LI GY+R
Sbjct: 95 -------------------------YLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
C+ A LF M + P+ TL ++ C + G + G+ VHG+ K GL+ D+ +
Sbjct: 130 GYECD-AWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN 333
AL FY + A+ ++ M ++ ++ N++IG G EEA +F + E N
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 334 -PISYNLMIKGYAMSSQIEKSKRLFEKMAPKN-LTSLNTMISVYSKNGELDEAVKLFDKT 391
IS +I + E L K N ++ + +++ YS+ G L A +L+
Sbjct: 248 VEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASA 307
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
K + + V S++S Y G A+ + R+L + + C G
Sbjct: 308 K-QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Query: 452 QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYH 511
LH + K+ V L+ YSK + F + + +W ++I+G
Sbjct: 367 MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQS 426
Query: 512 GLGSESILLF-RSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
G S + +F + ML G+LP+A T ++L+ CS LN G E+ H + R E
Sbjct: 427 GRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL-HGYTL--RNNFENE 483
Query: 571 HYTC--VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
++ C ++D+ + G +AE + W ++++
Sbjct: 484 NFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT-WNSMISG 524
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 169/411 (41%), Gaps = 49/411 (11%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N I+ +K EL A +F EM ++ SWNTMI YSQ G +EA+ + M V+
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
++ ++ +LS+ L H L++K G V ++L+ RC + AE +
Sbjct: 250 ISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
+ + + +V T+++S YA + D + A
Sbjct: 304 YASAKQDS-------------------------------IVGLTSIVSCYAEKGD-MDIA 331
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
+ F R+ + + L ++ C + + G +HG IK GL + L
Sbjct: 332 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM 391
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-----NPI 335
Y D ++ ++E + E L NS+I G + GR A +F+ + T + I
Sbjct: 392 YSKFDDVETVLFLFEQL-QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN----TMISVYSKNGELDEAVKLFDKT 391
+ ++ G + + K L N + N +I +Y+K G +A +F
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
K + TWNSM+SGY +G AL Y+ MR + TF + AC
Sbjct: 511 KAP-CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 155/347 (44%), Gaps = 22/347 (6%)
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV----VHGLCIKDGLDFDNSIGGA 276
+ +FR + RS + PN FT+ ++ A + ++ K+ V K GLD + +
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQ--ATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTS 90
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-ELIFYGLRETNPI 335
L Y + + A+ +++ M E V N+LI G G +A +L L++
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEM-PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSP 149
Query: 336 SYNLMIKGYAMSSQ--IEKSKRLFEKMAPKNLTSL-----NTMISVYSKNGELDEAVKLF 388
S ++ Q R +A K+ L N +IS YSK EL A LF
Sbjct: 150 SATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF 209
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
+ K ++++V+WN+M+ Y +G EA+ ++ M +V+ S T L A S
Sbjct: 210 REMK-DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS---- 264
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
+ LH + K ++ V T+LV YS+CG L A+R + S ++ T++++ Y
Sbjct: 265 --HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCY 322
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
A G +++ F + +A V IL C + ++ G+ +
Sbjct: 323 AEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 175/427 (40%), Gaps = 54/427 (12%)
Query: 31 EPHHPHVIS----TNISIAHR-----AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQW 81
EP H V+ +IS+ ++ G L A ++ ++ +++S Y++
Sbjct: 266 EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 82 GRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVG 141
G D A+ S + C+K++ ++ +L C +S + +G +H +KSG LV
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 142 SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV 201
+ L+ + + +FE+L++ + W+ ++SG VQ A ++F +M
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM------ 439
Query: 202 AWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
M +LP+ T+ ++ C++L L+ GK +HG
Sbjct: 440 -------------------------MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGY 474
Query: 262 CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE 321
+++ + +N + AL + Y A+ V++S+ C NS+I G L G
Sbjct: 475 TLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKA-PCTATWNSMISGYSLSGLQHR 533
Query: 322 AELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMI 372
A + +RE + I++ ++ +++ K F M + L M+
Sbjct: 534 ALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMV 593
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE-ALKLYVTMRRLSVDHS 431
+ + EA+ L K + +S W +++S I H E + YV + +D+
Sbjct: 594 GLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACI---IHRELEVGEYVARKMFMLDYK 650
Query: 432 RSTFSVL 438
VL
Sbjct: 651 NGGLYVL 657
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT-SLCSFQ-QGQ 452
R+ ++S++ IH S + ++ + R S+ + T S+ +A T S SF+ Q +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 453 LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHG 512
+ HL+K+ VYV T+L++ Y K G + AQ F + + W ALI GY+ +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 513 LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
++ LF ML QG P+A T V +L C G ++ G + H + + +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVK 189
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
++ + L AE +M + V W ++ A
Sbjct: 190 NALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGA 226
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 13 CCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWN 72
CC + K L LR++ + V + I + AK G +A +F + ++WN
Sbjct: 463 CCLNLGK-ELHGYTLRNNFENENFVCTALIDM--YAKCGNEVQAESVFKSIKAPCTATWN 519
Query: 73 TMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKS 132
+MISGYS G AL+ M +K +EI+F VLS+C G + GK + ++
Sbjct: 520 SMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK----ICFRA 575
Query: 133 GFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
++FG + L ++ + +G A L E L +++W +
Sbjct: 576 MIKEFG-ISPTLQHYALMVGLLGRACLFTEAL----YLIWKM 612
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/492 (33%), Positives = 261/492 (53%), Gaps = 14/492 (2%)
Query: 202 AWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
++ +I G + E AL L+R M+ S + P++FT + V CA+L + G+ VH
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 262 CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE 321
K GL+ D I +L Y + A+++++ + ++ NS+I G G ++
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS-WNSMISGYSEAGYAKD 216
Query: 322 AELIFYGLRET--NPISYNLMIKGYAMSSQIE-KSKRLFEKMAPKNLTSLNT-----MIS 373
A +F + E P L+ A S + ++ RL E+MA L+T +IS
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y K G+LD A ++F++ +++ V W +M++ Y NG+ SEA KL+ M + V
Sbjct: 277 MYGKCGDLDSARRVFNQMI-KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 335
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T S + AC S+ + + G+ + H S+ Q N+YV T LVD Y KCG + +A R F ++
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
N A W A+I YA+ G E++LLF M V P+ TF+ +LSAC HAGL++ G
Sbjct: 396 PVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGC 452
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWF 613
FH M + + P IEHYT ++DLL R+G L EA EF+ + P + D ++ A+L A
Sbjct: 453 RYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHK 512
Query: 614 WKDIEVGERAAEKLFSLDPNPISG-FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGC 672
KD+ + E+A L + +G +VI SN+ A + W + +R ++ + K PGC
Sbjct: 513 RKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGC 572
Query: 673 SWIELNNNIHMF 684
SWIE+ + F
Sbjct: 573 SWIEIEGELMEF 584
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 203/463 (43%), Gaps = 53/463 (11%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQ-WGRYDEALALASFMH 95
V N I + G+ + +F S+N MI G + W ++ AL+L M
Sbjct: 65 VEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMK 124
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
S +K ++ +++ V +CA+ + +G+ VHS L K G E+ + +L+ +C +G
Sbjct: 125 FSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVG 184
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
A +F+E+ + + V W+ M+SGY + +AMDLF KM E+
Sbjct: 185 YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-----------------EEE 227
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
G E P+E TL ++ C+ LG L G+++ + I + +G
Sbjct: 228 GFE---------------PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGS 272
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVA-NSLIGGLILMGRIEEAELIFYGLRET-- 332
L Y +D A+RV+ M + VA ++I G+ EA +F+ + +T
Sbjct: 273 KLISMYGKCGDLDSARRVFNQMIKKD--RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 333 NPISYNL--------MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEA 384
+P + L + + QIE E N+ ++ +Y K G ++EA
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHAS--ELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 385 VKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
+++F+ +N TWN+M++ Y H G EAL L+ R+SV S TF + AC
Sbjct: 389 LRVFEAMP-VKNEATWNAMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLSACVH 444
Query: 445 LCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
QG + H S + T ++D S+ G L +A
Sbjct: 445 AGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 272/532 (51%), Gaps = 42/532 (7%)
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGA 251
FG+ V D W +I ++ +D +AL L M + V ++F+L V++ C+RLG
Sbjct: 80 FGE--VEDPFLWNAVIKSHSHGKDP-RQALLLLCLMLENGVSVDKFSLSLVLKACSRLGF 136
Query: 252 LHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG 311
+ G +HG K GL D + L Y + ++++++ M ++ NS+I
Sbjct: 137 VKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY-NSMID 195
Query: 312 GLILMGRIEEAELIF--YGLRETNPISYNLMIKGYAMSSQ-IEKSKRLFEKMAPKNLTSL 368
G + G I A +F + N IS+N MI GYA +S ++ + +LF M K+L S
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISW 255
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTW---------------------------- 400
N+MI Y K+G +++A LFD R+ VTW
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFD-VMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 401 ---NSMMSGYIHNGQHSEALKLYVTMRRLS-VDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
NSMM+GY+ N H EAL+++ M + S + +T ++ A L + +H
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
++ + F +G AL+D YSKCG + A F I + ++ W A+I G A HGLG
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
+ + + + P+ TFV +L+ACSH+GL+ +GL F M+ +++ P ++HY C+V
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL-FSLDPNPI 635
D+L RSG ++ A+ I +MP+E + VIW L A K+ E GE A+ L NP
Sbjct: 495 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP- 553
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVE 687
S +V+LSNMYA G W +R ++ ++ K PGCSWIEL+ +H F V+
Sbjct: 554 SSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD 605
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 186/374 (49%), Gaps = 17/374 (4%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G L +R MFD MP R S+N+MI GY + G A L M L IS+++
Sbjct: 168 KCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNL--ISWNS 225
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
++S A++ G + S L EK + ++++ V+ I +A+ +F+ + +
Sbjct: 226 MISGYAQTSD---GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRD 282
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM- 227
V W+ M+ GY + + +A LF +MP RDVVA+ ++++GY + + E AL++F M
Sbjct: 283 VVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHME-ALEIFSDME 341
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ S +LP++ TL V+ A+LG L +H ++ +G AL + Y +I
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKG 343
A V+E + ++ ++ N++IGGL + G E A + + + + I++ ++
Sbjct: 402 QHAMLVFEGIENKS-IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNA 460
Query: 344 YAMSSQIEKSKRLFEKMAPKN-----LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV 398
+ S +++ FE M K+ L M+ + S++G ++ A L ++ E N V
Sbjct: 461 CSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV 520
Query: 399 TWNSMMSGYIHNGQ 412
W + ++ H+ +
Sbjct: 521 IWRTFLTACSHHKE 534
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/526 (21%), Positives = 221/526 (42%), Gaps = 88/526 (16%)
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
WN +I +S +AL L M + V +++ S S VL +C+R G + G Q+H L
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
K+G + + L+ ++C +G + +F+ + + V ++ M+ GYV+ ++ +A +
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 191 LFGKMP--VRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
LF MP ++++++W ++ISGYA+ DG + A LF M +++ +D
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMID-------- 260
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANS 308
G V HG I+DAK +++ M + A +
Sbjct: 261 ------GYVKHG-------------------------RIEDAKGLFDVMPRRDVVTWA-T 288
Query: 309 LIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA------P 362
+I G +G + A+ +F + + ++YN M+ GY + ++ +F M P
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP 348
Query: 363 KNLTSL----------------------------------NTMISVYSKNGELDEAVKLF 388
+ T + +I +YSK G + A+ +F
Sbjct: 349 DDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 389 DKTKGERNSVT-WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
+ E S+ WN+M+ G +G A + + + RLS+ TF + AC+
Sbjct: 409 EGI--ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
Query: 448 FQQGQLLHAHL-SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALI 505
++G L + K + + +VD S+ G + A+ + PN W +
Sbjct: 467 VKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFL 526
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
++H L+ + +++Q N +++V + + + G+ D
Sbjct: 527 TACSHHKEFETGELVAKHLILQAGY-NPSSYVLLSNMYASFGMWKD 571
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 139/342 (40%), Gaps = 47/342 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V++ I AK G + A+ +FD+MP R V ++N+M++GY Q + EAL + S M +
Sbjct: 283 VVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEK 342
Query: 97 SCVKL-NEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
L ++ + VL + A+ G L +H +++ F G +G AL+ +C I
Sbjct: 343 ESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQ 402
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
A LVFE + + + + W +I G A
Sbjct: 403 HAMLVFEGIEN-------------------------------KSIDHWNAMIGGLAIHGL 431
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
G E A D+ + R + P++ T V+ C+ H+G V GL + + + I
Sbjct: 432 G-ESAFDMLLQIERLSLKPDDITFVGVLNACS-----HSGLVKEGLLCFELMRRKHKIEP 485
Query: 276 ALAEFYCDRD------AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
L + C D +I+ AK + E M E + + + E EL+ L
Sbjct: 486 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
Query: 330 ---RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL 368
NP SY L+ YA + +R+ M + + +
Sbjct: 546 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKI 587
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 298/557 (53%), Gaps = 40/557 (7%)
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
I EA VF ++ + L++ M++GY + + + +A++LF +MPVRDVV+W ++ISG
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDNS 272
D A+ LF M V+ + ++ C R G + A ++ + + +KD +++
Sbjct: 111 GD-MNTAVKLFDEMPERSVV----SWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSM 165
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE- 331
+ G Y +DDA ++++ M G+ ++ ++I GL R EA +F +
Sbjct: 166 VHG-----YLQFGKVDDALKLFKQMPGKNVIS-WTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 332 ----------------TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVY 375
N ++++ I+ + + I K L+E+ +L I+ Y
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGL---IIKLGFLYEEYVSASL------ITFY 270
Query: 376 SKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTF 435
+ + ++ K+FD+ E+ +V W +++SGY N +H +AL ++ M R S+ ++STF
Sbjct: 271 ANCKRIGDSRKVFDEKVHEQVAV-WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTF 329
Query: 436 SVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS 495
+ +C++L + G+ +H K + + +VG +LV YS G++ DA F IF
Sbjct: 330 ASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK 389
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
++ +W ++I G A HG G + ++F M+ P+ TF +LSACSH G L G ++
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
Query: 556 FHSMQI-CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFW 614
F+ M + I+HYTC+VD+LGR G+LKEAEE I +M ++ + ++W ALL+A
Sbjct: 450 FYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Query: 615 KDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW 674
D++ GE+AA +F+LD + +V+LSN+YA GRW + +R +++ + K PG SW
Sbjct: 510 SDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSW 569
Query: 675 IELNNNIHMFSVEDKTH 691
+ + H F D+ H
Sbjct: 570 VVIRGKKHEFFSGDQPH 586
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 231/488 (47%), Gaps = 53/488 (10%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
PHV I ++ L +A ++FDEMP+R V SWN+MISG + G + A+ L M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
V +S++A+++ C RSG +
Sbjct: 124 PERSV----VSWTAMVNGCFRSGK-----------------------------------V 144
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
+AE +F ++ + W+ M+ GY+Q + +A+ LF +MP ++V++WTT+I G + E
Sbjct: 145 DQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNE 204
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
E ALDLF+ M R + CVI CA A H G VHGL IK G ++ +
Sbjct: 205 RSGE-ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVS 263
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG-LRET- 332
+L FY + I D+++V++ E + V +L+ G L + E+A IF G LR +
Sbjct: 264 ASLITFYANCKRIGDSRKVFDEKVHEQ-VAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Query: 333 --NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL----NTMISVYSKNGELDEAVK 386
N ++ + + ++ K + L + N+++ +YS +G +++AV
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVS 382
Query: 387 LFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLC 446
+F K +++ V+WNS++ G +G+ A ++ M RL+ + TF+ L AC+
Sbjct: 383 VFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 447 SFQQGQLLHAHLSK--TPFQANVYVGTALVDFYSKCGHLADAQRSFTS-IFSPNVAAWTA 503
++G+ L ++S + T +VD +CG L +A+ + PN W A
Sbjct: 442 FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLA 501
Query: 504 LINGYAYH 511
L++ H
Sbjct: 502 LLSACRMH 509
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 61/308 (19%)
Query: 309 LIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL 368
LI +L RI+EA +F + + Y MI GY S+++ + LF++M +++ S
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 369 NTMISVYSKNGELDEAVKLFDK----------------------TKGER--------NSV 398
N+MIS + G+++ AVKLFD+ + ER ++
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMR-------------------------------RLS 427
WNSM+ GY+ G+ +ALKL+ M R
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+ + F+ + AC + +F G +H + K F YV +L+ FY+ C + D++
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
+ F VA WTAL++GY+ + +++ +F ML +LPN +TF + L++CS G
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 548 LLNDGLEI 555
L+ G E+
Sbjct: 341 TLDWGKEM 348
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/543 (30%), Positives = 274/543 (50%), Gaps = 47/543 (8%)
Query: 199 DVVAWTTLISGYARREDGCERALDLFRCMRRS---EVLPNEFTLDCVIRICARLGALHAG 255
++ +W I G++ E+ E L L++ M R E P+ FT + ++CA L G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFL-LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 256 KVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLIL 315
++ G +K L+ + + A + +++A++V++ ++ N LI G
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVS-WNCLINGYKK 234
Query: 316 MGRIEEAELI----------------------------------FY------GLRETNPI 335
+G E+A + FY GLR T P+
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
N ++ ++ I +++R+F+ + + + S TMIS Y++ G LD + KLFD + E+
Sbjct: 295 -VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME-EK 352
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
+ V WN+M+ G + + +AL L+ M+ + T AC+ L + G +H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
++ K NV +GT+LVD Y+KCG++++A F I + N +TA+I G A HG S
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
+I F M+ G+ P+ TF+ +LSAC H G++ G + F M+ + + P ++HY+ +
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
VDLLGR+G L+EA+ + MP+EAD +WGALL ++E+GE+AA+KL LDP+
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSD 695
+V+L MY W R+ + + K PGCS IE+N + F V DK+ S+
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Query: 696 VIY 698
IY
Sbjct: 653 KIY 655
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 197/409 (48%), Gaps = 15/409 (3%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK 100
N SI A G++ AR +FDE P+R + SWN +I+GY + G ++A+ + M VK
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELV 160
++++ ++SSC+ G L GK+ + + ++G + +AL+ +C I EA +
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F+ L V W+ M+SGY + ++ + LF M +DVV W +I G + + G + A
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG-QDA 373
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
L LF+ M+ S P+E T+ + C++LGAL G +H K L + ++G +L +
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPI 335
Y I +A V+ + L ++IGGL L G A E+I G+ + I
Sbjct: 434 YAKCGNISEALSVFHGIQTRNSLTYT-AIIGGLALHGDASTAISYFNEMIDAGI-APDEI 491
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDK 390
++ ++ I+ + F +M + L + M+ + + G L+EA +L +
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
E ++ W +++ G +G K + L +D S S VL
Sbjct: 552 MPMEADAAVWGALLFGCRMHGNVELGEK--AAKKLLELDPSDSGIYVLL 598
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 376 SKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS-- 433
S++ LD +VK+ + N +WN + G+ + E+ LY M R SR
Sbjct: 98 SESRYLDYSVKILKGIENP-NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDH 156
Query: 434 -TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
T+ VLF+ C L G ++ H+ K + +V A + ++ CG + +A++ F
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
++ +W LINGY G ++I +++ M +GV P+ T + ++S+CS G LN G
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 553 LEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
E + ++ + TI ++D+ + G + EA + +
Sbjct: 277 KEFYEYVKE-NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 161/386 (41%), Gaps = 46/386 (11%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISG 77
E R+F L + + ++S I+ A+ G L +R +FD+M + V WN MI G
Sbjct: 310 EARRIFDNLEKRT------IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
Q R +ALAL M S K +EI+ LS+C++ G+L +G +H + K
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLN 423
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
+G++L+ +C I E A+ +F +
Sbjct: 424 VALGTSLVDMYAKCGNISE-------------------------------ALSVFHGIQT 452
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
R+ + +T +I G A D A+ F M + + P+E T ++ C G + G+
Sbjct: 453 RNSLTYTAIIGGLALHGDA-STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD 511
Query: 258 VHGLCIKDGLDFDNSIG--GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLIL 315
+K + + + + + +++A R+ ESM EA V +L+ G +
Sbjct: 512 YFSQ-MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570
Query: 316 MGRIEEAELIFYGLRETNPIS---YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMI 372
G +E E L E +P Y L+ Y ++ E +KR M + + +
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSV 398
S+ NG + E + + DK++ E +
Sbjct: 631 SI-EVNGIVCEFI-VRDKSRPESEKI 654
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 230/406 (56%), Gaps = 8/406 (1%)
Query: 307 NSLIGGLILMGRIEEA-ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
+ + GL + GR++EA L++ + P +Y ++++ + K KR+ +M
Sbjct: 80 DKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 366 TSLNTMISV-----YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
+LN + V Y+ +G+L A LF K R+ + WN+M+SGY+ G E L +Y
Sbjct: 140 -ALNEYLKVKLLILYALSGDLQTAGILFRSLK-IRDLIPWNAMISGYVQKGLEQEGLFIY 197
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
MR+ + + TF+ +FRAC++L + G+ HA + K ++N+ V +ALVD Y KC
Sbjct: 198 YDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKC 257
Query: 481 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
+D R F + + NV WT+LI+GY YHG SE + F M +G PN TF+ +L
Sbjct: 258 SSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVL 317
Query: 541 SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD 600
+AC+H GL++ G E F+SM+ Y + P +HY +VD LGR+GRL+EA EF+ + P +
Sbjct: 318 TACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEH 377
Query: 601 GVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKR 660
+WG+LL A ++++ E AA K LDP +V+ +N YA G + +R++
Sbjct: 378 PPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRK 437
Query: 661 LQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTA 706
+++ ++KDPG S IEL +H F +D +H S+ IY V +T+
Sbjct: 438 MENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTS 483
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 132/322 (40%), Gaps = 46/322 (14%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A +G+L A +F + +R + WN MISGY Q G E L + M ++ + ++ +F+
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+V +C+ L GK+ H++++K + +V SAL+ +C + VF++L
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N + W+ ++SGY + + F KM +E+GC
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKM-----------------KEEGCR--------- 307
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
PN T V+ C H G V G + D I + D +
Sbjct: 308 ------PNPVTFLVVLTACN-----HGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTL 356
Query: 288 DDAKRV---YESMGGEACLN---VANSLIGGLILMGRIEEAELI---FYGLRETNPISYN 338
A R+ YE + C V SL+G + G ++ EL F L TN +Y
Sbjct: 357 GRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYV 416
Query: 339 LMIKGYAMSSQIEKSKRLFEKM 360
+ GYA E + ++ KM
Sbjct: 417 VFANGYASCGLREAASKVRRKM 438
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 272/529 (51%), Gaps = 9/529 (1%)
Query: 185 MGNAMDLFGKMPVRD-VVAWTTLISGYARREDGCERALDLFRCMRRSEVL-PNEFTLDCV 242
+G A LF + P RD ++I Y + + L+R +R+ P+ FT +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD-SFALYRDLRKETCFAPDNFTFTTL 84
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC 302
+ C+ ++ G +H + G D + + + Y + A+ ++ M +
Sbjct: 85 TKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLRETNPIS-YNLMIKGYAMSSQIEKSKRLFEKMA 361
++ +LI G I G ++ A +F + + YN M+ G+ S + ++RLF++M
Sbjct: 145 VS-WTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
K + + TMI Y ++D A KLFD ERN V+WN+M+ GY N Q E ++L+
Sbjct: 204 HKTVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 422 TMR-RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
M+ S+D T + A + + G+ H + + V V TA++D YSKC
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 481 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
G + A+R F + VA+W A+I+GYA +G ++ LF +M+++ P+ T +A++
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVI 381
Query: 541 SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD 600
+AC+H GL+ +G + FH M+ + IEHY C+VDLLGR+G LKEAE+ I MP E +
Sbjct: 382 TACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPN 440
Query: 601 GVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKR 660
G+I + L+A +KDIE ER +K L+P +V+L N+YA RW ++
Sbjct: 441 GIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNV 500
Query: 661 LQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATIN 709
++ + +K+ GCS IE+N + F D TH + I+ + L +N
Sbjct: 501 MRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMN 549
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 213/480 (44%), Gaps = 61/480 (12%)
Query: 36 HVISTNISIAHR-----AKTGELAEARHMFDEMPLRTVSSW-NTMISGYSQWGRYDEALA 89
H I TN+ I + A + AR +FD+ P R S N+MI Y + +Y ++ A
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 90 LASFMHR-SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L + + +C + +F+ + SC+ S ++ G Q+HS + + GF V + ++
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMP-VRDVVAWTTLI 207
+ +G A F+E+ + V W+ ++SGY++ + A LF +MP V+DVV + ++
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 208 SGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGL 267
G+ + D M + L +E T VI ++HG
Sbjct: 184 DGFVKSGD-----------MTSARRLFDEMTHKTVITWTT---------MIHG------- 216
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY 327
YC+ ID A++++++M E L N++IGG + +E +F
Sbjct: 217 -------------YCNIKDIDAARKLFDAM-PERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 328 GLRET---NPISYNLMIKGYAMSSQIEKSKRLF------EKMAPKNLTSLNTMISVYSKN 378
++ T +P ++ A+S S + K K + ++ +YSK
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL 438
GE+++A ++FD+ E+ +WN+M+ GY NG AL L+VTM + T +
Sbjct: 323 GEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAV 380
Query: 439 FRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPN 497
AC ++G+ + + A + +VD + G L +A+ T++ F PN
Sbjct: 381 ITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPN 440
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 34/306 (11%)
Query: 30 SEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALA 89
E H VI+ I ++ AR +FD MP R + SWNTMI GY Q + E +
Sbjct: 200 DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 90 LASFMH-RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L M + + ++++ +VL + + +G+L LG+ H + + +K V +A+L
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
+C I +A+ +F+E+ + W+ M+ GY ++
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA--------------------------LN 353
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
G AR ALDLF M E P+E T+ VI C G + G+ + + GL+
Sbjct: 354 GNAR------AALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLN 406
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
G + + ++ +A+ + +M E + +S + IE AE I
Sbjct: 407 AKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK 466
Query: 329 LRETNP 334
E P
Sbjct: 467 AVELEP 472
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 251/478 (52%), Gaps = 21/478 (4%)
Query: 247 ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC----DRDAIDDAKRVYESMGGEAC 302
+L +HA + HG+ I D +G L FY + A +V+ +
Sbjct: 31 TKLRQIHAFSIRHGVSISDA-----ELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 303 LNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLF 357
+ + N+LI G +G A E+ GL E + +Y +IK + + + +
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 358 EKMAPKNLTSL----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH 413
+ SL N+++ +Y+ G++ A K+FDK E++ V WNS+++G+ NG+
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNSVINGFAENGKP 203
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
EAL LY M + T L AC + + G+ +H ++ K N++ L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 474 VDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM-LVQGVLPN 532
+D Y++CG + +A+ F + N +WT+LI G A +G G E+I LF+ M +G+LP
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 533 AATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFI 592
TFV IL ACSH G++ +G E F M+ Y++ P IEH+ C+VDLL R+G++K+A E+I
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 593 NQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWG 652
MP++ + VIW LL A D ++ E A ++ L+PN +V+LSNMYA RW
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 653 QKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINS 710
IRK++ ++K PG S +E+ N +H F + DK+H SD IYA + +T + S
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 501
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 193/432 (44%), Gaps = 53/432 (12%)
Query: 62 EMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS-CVKLNEISFSAVLSSCARSGSLF 120
E P+ V WNT+I GY++ G A +L M S V+ + ++ ++ + +
Sbjct: 80 EKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYV 180
LG+ +HS++++SGF V ++LL+ C + A VF+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD------------------ 180
Query: 181 QRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERALDLFRCMRRSEVLPNEFTL 239
KMP +D+VAW ++I+G+A E+G E AL L+ M + P+ FT+
Sbjct: 181 -------------KMPEKDLVAWNSVINGFA--ENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
++ CA++GAL GK VH IK GL + L + Y +++AK +++ M
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRETN---PISYNLMIKGYAMS------SQI 350
+ ++ SLI GL + G +EA +F + T P + YA S
Sbjct: 286 KNSVS-WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 351 EKSKRLFE--KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
E +R+ E K+ P+ + M+ + ++ G++ +A + + N V W +++
Sbjct: 345 EYFRRMREEYKIEPR-IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRS--TFSVLFRACTSLCSFQQ--GQLLHAHLSKTPFQ 464
+G A + + +L +HS S ++ + Q+ Q+L + K P
Sbjct: 404 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 463
Query: 465 ANVYVGTALVDF 476
+ V VG + +F
Sbjct: 464 SLVEVGNRVHEF 475
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 47/323 (14%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A G++A A +FD+MP + + +WN++I+G+++ G+ +EALAL + M+ +K + +
Sbjct: 167 ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 226
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++LS+CA+ G+L LGK+VH ++K G + + LL RC + EA+ +F+E+ D
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N V W+ ++ +G A++ FGK A++LF+ M
Sbjct: 287 NSVSWTSLI--------VGLAVNGFGK------------------------EAIELFKYM 314
Query: 228 RRSE-VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
+E +LP E T ++ C+ H G V G + + I + F C D
Sbjct: 315 ESTEGLLPCEITFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 287 IDDA---KRVYE---SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI---SY 337
+ A K+ YE SM + + + +L+G + G + AE + + P Y
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 338 NLMIKGYAMSSQIEKSKRLFEKM 360
L+ YA + +++ ++M
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQM 452
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 275/531 (51%), Gaps = 46/531 (8%)
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
+ L LF +R + P+ FTL V++ RL + G+ VHG +K GL+FD+ + +L
Sbjct: 29 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLM 88
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS-- 336
Y I+ +V++ M ++ N LI + GR E+A +F + + + +
Sbjct: 89 GMYASLGKIEITHKVFDEMPQRDVVS-WNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147
Query: 337 -----------------------YNLMIKGYAMSSQI--------------EKSKRLFEK 359
Y ++ + MS +I +K++ +F+
Sbjct: 148 EGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDS 207
Query: 360 MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKL 419
M KN+ +M+ Y G +DEA LF+++ ++ V W +MM+GY+ + EAL+L
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP-VKDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSK 479
+ M+ + L C + +QG+ +H ++++ + VGTALVD Y+K
Sbjct: 267 FRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
CG + A F I + A+WT+LI G A +G+ ++ L+ M GV +A TFVA+
Sbjct: 327 CGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAV 386
Query: 540 LSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEA 599
L+AC+H G + +G +IFHSM + V P EH +C++DLL R+G L EAEE I++M E+
Sbjct: 387 LTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGES 446
Query: 600 DGV---IWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTT 656
D ++ +LL+A+ + ++++ ER AEKL ++ + S +L+++YA RW T
Sbjct: 447 DETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTN 506
Query: 657 IRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK--THAYSDVIYATVDHLT 705
+R++++ L +RK PGCS IE++ H F V D +H D I + + T
Sbjct: 507 VRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTT 557
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 204/397 (51%), Gaps = 16/397 (4%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM-HRSCVKLNEISF 106
A G++ +FDEMP R V SWN +IS Y GR+++A+ + M S +K +E +
Sbjct: 92 ASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTI 151
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
+ LS+C+ +L +G++++ ++ + FE +G+AL+ +C + +A VF+ +RD
Sbjct: 152 VSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRD 210
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N W+ M+ GYV + A LF + PV+DVV WT +++GY + + + AL+LFRC
Sbjct: 211 KNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQF-NRFDEALELFRC 269
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M+ + + P+ F L ++ CA+ GAL GK +HG ++ + D +G AL + Y
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIK 342
I+ A V+ + E SLI GL + G A ++Y + + I++ ++
Sbjct: 330 IETALEVFYEI-KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLT 388
Query: 343 GYAMSSQIEKSKRLFEKMAPKNLTSLNT-----MISVYSKNGELDEAVKLFDKTKGERNS 397
+ + +++F M ++ + +I + + G LDEA +L DK +GE +
Sbjct: 389 ACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDE 448
Query: 398 V---TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
+ S++S + G A ++ + ++ V S
Sbjct: 449 TLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 24/318 (7%)
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
+N M+ ++ L L+ +R + T V+ ++ L +G+ +H +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
K + + YV +L+ Y+ G + + F + +V +W LI+ Y +G ++I
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 520 LFRSMLVQGVLP-NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
+F+ M + L + T V+ LSACS L G I+ + + ++ I + +VD+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDM 191
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGF 638
+ G L +A + M + + W +++ + + G R E + +P+
Sbjct: 192 FCKCGCLDKARAVFDSMR-DKNVKCWTSMV-----FGYVSTG-RIDEARVLFERSPVKDV 244
Query: 639 VI---LSNMYAILGRWGQKTTIRKRLQSLELRKD--------PGCSW---IELNNNIHMF 684
V+ + N Y R+ + + + +Q+ +R D GC+ +E IH +
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 685 SVEDKTHAYSDVIYATVD 702
E++ V A VD
Sbjct: 305 INENRVTVDKVVGTALVD 322
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 253/480 (52%), Gaps = 11/480 (2%)
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
+ +++ C L G++VH ++ D +G L Y ++++A++V+E M
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKR 355
+ +LI G R +A L F + N + + +IK A + +
Sbjct: 124 RDFV-TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 356 LFEKMAP----KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNG 411
L N+ + ++ +Y++ G +D+A +FD + RN V+WN++++G+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRS 241
Query: 412 QHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGT 471
+AL+L+ M R S +++ LF AC+S +QG+ +HA++ K+ + + G
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 472 ALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLP 531
L+D Y+K G + DA++ F + +V +W +L+ YA HG G E++ F M G+ P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 532 NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEF 591
N +F+++L+ACSH+GLL++G + M+ + P HY VVDLLGR+G L A F
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 592 INQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRW 651
I +MPIE IW ALLNA K+ E+G AAE +F LDP+ VIL N+YA GRW
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 652 GQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
+RK+++ ++K+P CSW+E+ N IHMF D+ H + I + + A I +
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 195/416 (46%), Gaps = 45/416 (10%)
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
++ +L C L G+ VH+ +L+S F ++G+ LL +C + EA VFE++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
+ V W+ ++SGY Q D +A+ F +M L GY+
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQM----------LRFGYS-------------- 158
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
PNEFTL VI+ A G +HG C+K G D + +G AL + Y
Sbjct: 159 --------PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 286 AIDDAKRVYESMGGEACLNVA-NSLIGGLILMGRIEEAELIFYG-LRE---TNPISYNLM 340
+DDA+ V++++ E+ +V+ N+LI G E+A +F G LR+ + SY +
Sbjct: 211 LMDDAQLVFDAL--ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 341 IKGYAMSSQIEKSKRLFEKM--APKNLTSL--NTMISVYSKNGELDEAVKLFDKTKGERN 396
+ + +E+ K + M + + L + NT++ +Y+K+G + +A K+FD+ +R+
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRD 327
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
V+WNS+++ Y +G EA+ + MRR+ + + +F + AC+ +G +
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
+ K + +VD + G L A R + P A W AL+N H
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 41/378 (10%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
++ N + AK G L EAR +F++MP R +W T+ISGYSQ R +AL + M R
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
NE + S+V+ + A G Q+H +K GF+ VGSALL R + +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A+LVF+ L N V W+ +++G+ +R G
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARR--------------------------------SG 242
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
E+AL+LF+ M R P+ F+ + C+ G L GK VH IK G G
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET---- 332
L + Y +I DA+++++ + ++ NSL+ G +EA F +R
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLF 388
N IS+ ++ + S +++ +E M + T++ + + G+L+ A++
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 389 DKTKGERNSVTWNSMMSG 406
++ E + W ++++
Sbjct: 422 EEMPIEPTAAIWKALLNA 439
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 164/339 (48%), Gaps = 29/339 (8%)
Query: 315 LMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISV 374
L G A+ FY + L+I+G + + I +S +F ++ NT++++
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS--IFRH----DIVMGNTLLNM 104
Query: 375 YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRST 434
Y+K G L+EA K+F+K +R+ VTW +++SGY + + +AL + M R + T
Sbjct: 105 YAKCGSLEEARKVFEKMP-QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
S + +A + G LH K F +NV+VG+AL+D Y++ G + DAQ F ++
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLE 554
S N +W ALI G+A +++ LF+ ML G P+ ++ ++ ACS G L G +
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-K 282
Query: 555 IFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNAS--- 611
H+ I ++D+ +SG + +A + +++ + D V W +LL A
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Query: 612 --------WFWKDIEVGERAAEKLFSLDPNPISGFVILS 642
WF + VG R PN IS +L+
Sbjct: 342 GFGKEAVWWFEEMRRVGIR---------PNEISFLSVLT 371
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/609 (27%), Positives = 307/609 (50%), Gaps = 51/609 (8%)
Query: 80 QWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL 139
+ G+ EA+ + + H S + ++++L +C + S G Q H+ ++KSG E
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 140 VGSALLYFCVRCC-GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR 198
VG++LL + G+ E VF DG V +
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVF----DGRFV---------------------------K 126
Query: 199 DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVV 258
D ++WT+++SGY ++ +AL++F M + NEFTL ++ C+ LG + G+
Sbjct: 127 DAISWTSMMSGYVTGKEHV-KALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 259 HGLCIKDGLDFDNSIGGALAEFY-CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
HG+ I G ++++ I LA Y +R+ +D A+RV++ M E + +++
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVD-ARRVFDEMP-EPDVICWTAVLSAFSKND 243
Query: 318 RIEEAELIFYGLRETNPISYNLMIKGYAMSS-----QIEKSKRLFEKMAPK----NLTSL 368
EEA +FY + + + G +++ ++++ K + K+ N+
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
++++ +Y K G + EA ++F+ ++NSV+W++++ GY NG+H +A++++ M
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREME---- 358
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
+ F + +AC L + + G+ +H + NV V +AL+D Y K G + A R
Sbjct: 359 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
++ + N+ W A+++ A +G G E++ F M+ +G+ P+ +F+AIL+AC H G+
Sbjct: 419 VYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGM 478
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+++G F M Y + P EHY+C++DLLGR+G +EAE + + D +WG LL
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Query: 609 NASWFWKDI-EVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
D V ER A+++ L+P +V+LSNMY +GR G IRK + +
Sbjct: 539 GPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVA 598
Query: 668 KDPGCSWIE 676
K G SWI+
Sbjct: 599 KTVGQSWID 607
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 197/441 (44%), Gaps = 40/441 (9%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
+ E R +FD ++ SW +M+SGY + +AL + M + NE + S+ + +
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
C+ G + LG+ H +++ GFE + S L Y +A VF+E+ + + + W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE- 231
+ +LS + + D+ E AL LF M R +
Sbjct: 233 TAVLSAFSKNDLY--------------------------------EEALGLFYAMHRGKG 260
Query: 232 VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAK 291
++P+ T V+ C L L GK +HG I +G+ + + +L + Y ++ +A+
Sbjct: 261 LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREAR 320
Query: 292 RVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIE 351
+V+ M + ++ + +L+GG G E+A IF + E + + ++K A + +
Sbjct: 321 QVFNGMSKKNSVSWS-ALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVR 379
Query: 352 KSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY 407
K + + + N+ + +I +Y K+G +D A +++ K RN +TWN+M+S
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS-IRNMITWNAMLSAL 438
Query: 408 IHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQAN 466
NG+ EA+ + M + + +F + AC +G+ ++K+ +
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPG 498
Query: 467 VYVGTALVDFYSKCGHLADAQ 487
+ ++D + G +A+
Sbjct: 499 TEHYSCMIDLLGRAGLFEEAE 519
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 166/380 (43%), Gaps = 50/380 (13%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
H IS+ ++ + E +AR +FDEMP V W ++S +S+ Y+EAL L MH
Sbjct: 198 HFISSTLAYLYGVNR-EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 96 RSCVKLNEIS-FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
R + + S F VL++C L GK++H L+ +G +V S+LL +C +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
EA VF + N V WS +L GY Q A+++F +M +D+ + T
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGT--------- 367
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
V++ CA L A+ GK +HG ++ G + +
Sbjct: 368 ---------------------------VLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGL 329
AL + Y ID A RVY M + N+++ L GR EEA +++ G+
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIRNMI-TWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT-----MISVYSKNGELDEA 384
+ + IS+ ++ + +++ + F MA T MI + + G +EA
Sbjct: 460 K-PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518
Query: 385 VKLFDKTKGERNSVTWNSMM 404
L ++ + ++ W ++
Sbjct: 519 ENLLERAECRNDASLWGVLL 538
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 230/400 (57%), Gaps = 2/400 (0%)
Query: 314 ILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMIS 373
+ GR +++ +G + + L I+ Y + ++++F++M K++ N +++
Sbjct: 132 VWFGRQIHGQVVVFGFDSSVHVVTGL-IQMYFSCGGLGDARKMFDEMLVKDVNVWNALLA 190
Query: 374 VYSKNGELDEAVKLFDKTK-GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSR 432
Y K GE+DEA L + RN V+W ++SGY +G+ SEA++++ M +V+
Sbjct: 191 GYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDE 250
Query: 433 STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
T + AC L S + G+ + +++ V + A++D Y+K G++ A F
Sbjct: 251 VTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFEC 310
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
+ NV WT +I G A HG G+E++ +F M+ GV PN TF+AILSACSH G ++ G
Sbjct: 311 VNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLG 370
Query: 553 LEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASW 612
+F+SM+ Y + P IEHY C++DLLGR+G+L+EA+E I MP +A+ IWG+LL AS
Sbjct: 371 KRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASN 430
Query: 613 FWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGC 672
D+E+GERA +L L+PN +++L+N+Y+ LGRW + +R ++ + ++K G
Sbjct: 431 VHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGE 490
Query: 673 SWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSII 712
S IE+ N ++ F D TH + I+ + + I S +
Sbjct: 491 SSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQSKV 530
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 176/380 (46%), Gaps = 30/380 (7%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS----CVKLNE 103
+ G L A +F P NTMI S + A ++A ++R C K +
Sbjct: 58 SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPN-AHSIAITVYRKLWALCAKPDT 116
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEE 163
+F VL R ++ G+Q+H ++ GF+ V + L+ C G+G+A +F+E
Sbjct: 117 FTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDE 176
Query: 164 LRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMP--VRDVVAWTTLISGYARREDGCERAL 221
+ + +W+ +L+GY + M A L MP VR+ V+WT +ISGYA+ E A+
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE-AI 235
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
++F+ M V P+E TL V+ CA LG+L G+ + G++ S+ A+ + Y
Sbjct: 236 EVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 282 CDRDAIDDAKRVYESMGGEACLNVAN-----SLIGGLILMGRIEEAELIF-----YGLRE 331
I A V+E C+N N ++I GL G EA +F G+R
Sbjct: 296 AKSGNITKALDVFE------CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR- 348
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVK 386
N +++ ++ + ++ KRLF M K N+ MI + + G+L EA +
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 387 LFDKTKGERNSVTWNSMMSG 406
+ + N+ W S+++
Sbjct: 409 VIKSMPFKANAAIWGSLLAA 428
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 157/356 (44%), Gaps = 63/356 (17%)
Query: 41 NISIAHRAKTGELAEARHMFDEMP--LRTVSSWNTMISGYSQWGRYDEALALASFMHRSC 98
N +A K GE+ EAR + + MP +R SW +ISGY++ GR EA+ + M
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAE 158
V+ +E++ AVLS+CA GSL LG+++ S + G + + +A++ + I +A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE 218
VFE + + N V W TT+I+G A G E
Sbjct: 306 DVFECVNERNVVTW-------------------------------TTIIAGLATHGHGAE 334
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK-VVHGLCIKDGLDFDNSIGGAL 277
AL +F M ++ V PN+ T ++ C+ +G + GK + + + K G+ + G +
Sbjct: 335 -ALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
+ + +A V +SM + AN+ I G +L + + +
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFK-----ANAAIWGSLL---------------AASNVHH 433
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
+L + A+S I K+ P N + + ++YS G DE+ + + KG
Sbjct: 434 DLELGERALSELI--------KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKG 481
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 52/218 (23%)
Query: 413 HSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTA 472
HS A+ +Y + L TF + + + G+ +H + F ++V+V T
Sbjct: 97 HSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 473 LVDFYSKCGHLADAQRSFTSIFSPNVAAWTAL---------------------------- 504
L+ Y CG L DA++ F + +V W AL
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 505 -----INGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
I+GYA G SE+I +F+ ML++ V P+ T +A+LSAC+ G S+
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG----------SL 266
Query: 560 QICYRVTPTIEHY---------TCVVDLLGRSGRLKEA 588
++ R+ ++H V+D+ +SG + +A
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/587 (28%), Positives = 291/587 (49%), Gaps = 52/587 (8%)
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE-DGCERALDLFRCMR 228
V W L G+V A LF K+P DVV W +I G+++ + DG + L+ M
Sbjct: 74 VFWCSRLGGHVSY-----AYKLFVKIPEPDVVVWNNMIKGWSKVDCDG--EGVRLYLNML 126
Query: 229 RSEVLPNEFTLDCVIRICARLG-ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ V P+ T ++ R G AL GK +H +K GL + + AL + Y +
Sbjct: 127 KEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLM 186
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-ELIFYGLRE-TNPISY-------- 337
D A+ V++ E + N +I G M EE+ EL+ R +P S
Sbjct: 187 DMARGVFDRRCKEDVFS-WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 338 -----------------------------NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL 368
N ++ YA +++ + R+F M +++ S
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
+++ Y + G L A FD+ R+ ++W M+ GY+ G +E+L+++ M+ +
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMP-VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
T + AC L S + G+ + ++ K + +V VG AL+D Y KCG AQ+
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + + WTA++ G A +G G E+I +F M + P+ T++ +LSAC+H+G+
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
++ + F M+ +R+ P++ HY C+VD+LGR+G +KEA E + +MP+ + ++WGALL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
AS D + E AA+K+ L+P+ + + +L N+YA RW +R+++ + ++K
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 669 DPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLT--ATINSIIP 713
PG S IE+N H F DK+H S+ IY ++ L +T + +P
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLP 651
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 190/373 (50%), Gaps = 14/373 (3%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G + AR +FD V SWN MISGY++ Y+E++ L M R+ V ++ VL
Sbjct: 184 GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
S+C++ L K+VH + + E + +AL+ C + A +F ++ + +
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC-ERALDLFRCMRR 229
W+ ++ GYV+R + A F +MPVRD ++WT +I GY R GC +L++FR M+
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA--GCFNESLEIFREMQS 361
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
+ ++P+EFT+ V+ CA LG+L G+ + K+ + D +G AL + Y +
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYA 345
A++V+ M +++ GL G+ +EA +F+ ++ + + I+Y ++
Sbjct: 422 AQKVFHDMDQRDKF-TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACN 480
Query: 346 MSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
S ++++++ F KM +L M+ + + G + EA ++ K NS+ W
Sbjct: 481 HSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVW 540
Query: 401 NSMM-SGYIHNGQ 412
+++ + +HN +
Sbjct: 541 GALLGASRLHNDE 553
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 217/552 (39%), Gaps = 79/552 (14%)
Query: 4 FLRFCPVRNCCKRVEKFRLF--TTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFD 61
+ RF + CK ++F+ ++ R P+ + R G ++ A +F
Sbjct: 34 YSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRL-GGHVSYAYKLFV 92
Query: 62 EMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSG-SLF 120
++P V WN MI G+S+ E + L M + V + +F +L+ R G +L
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYV 180
GK++H ++K G V +AL+ C + A VF+ + W+LM+SGY
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY- 211
Query: 181 QRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
N M + E +++L M R+ V P TL
Sbjct: 212 ------NRMKEY-------------------------EESIELLVEMERNLVSPTSVTLL 240
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGE 300
V+ C+++ K VH + + + AL Y +D A R++ SM
Sbjct: 241 LVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR 300
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
++ S++ G + G ++ A F + + IS+ +MI GY + +S +F +M
Sbjct: 301 DVIS-WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM 359
Query: 361 A-----PKNLTSL----------------------------------NTMISVYSKNGEL 381
P T + N +I +Y K G
Sbjct: 360 QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCS 419
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
++A K+F +R+ TW +M+ G +NGQ EA+K++ M+ +S+ T+ + A
Sbjct: 420 EKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 442 CTSLCSFQQGQLLHAHL-SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVA 499
C Q + A + S + ++ +VD + G + +A + +PN
Sbjct: 479 CNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 500 AWTALINGYAYH 511
W AL+ H
Sbjct: 539 VWGALLGASRLH 550
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 242/461 (52%), Gaps = 35/461 (7%)
Query: 204 TTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
++I YA E AL +FR M V P++++ V++ CA G+ +HGL I
Sbjct: 109 NSVIRAYANSSTP-EVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 167
Query: 264 KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAE 323
K GL D + L Y + A++V + M
Sbjct: 168 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----------------------- 204
Query: 324 LIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDE 383
+ +S+N ++ Y +++++ LF++M +N+ S N MIS Y+ G + E
Sbjct: 205 ---------DAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKE 255
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS-TFSVLFRAC 442
A ++FD R+ V+WN+M++ Y H G ++E L+++ M S + T + AC
Sbjct: 256 AKEVFDSMP-VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
SL S QG+ +H ++ K + ++ TALVD YSKCG + A F + +V+ W
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWN 374
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
++I+ + HGLG +++ +F M+ +G PN TF+ +LSAC+H G+L+ ++F M
Sbjct: 375 SIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGER 622
YRV PTIEHY C+VDLLGR G+++EAEE +N++P + ++ +LL A + +E ER
Sbjct: 435 YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAER 494
Query: 623 AAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQS 663
A +L L+ SG+ +SN+YA GRW + R+ +++
Sbjct: 495 IANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRA 535
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 181/391 (46%), Gaps = 47/391 (12%)
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
N++I Y+ + AL + M V ++ SF+ VL +CA G+Q+H L +K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 132 SGF-----------EKFGLVG--------------------SALLYFCVRCCGIGEAELV 160
SG +G G ++LL + + EA +
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC-ER 219
F+E+ + N W+ M+SGY ++ A ++F MPVRDVV+W +++ YA GC
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV--GCYNE 286
Query: 220 ALDLF-RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
L++F + + S P+ FTL V+ CA LG+L G+ VH K G++ + + AL
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETN 333
+ Y ID A V+ + ++ NS+I L + G ++A E+++ G + N
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRD-VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK-PN 404
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTSLNTMISVYSKNGELDEAVKLF 388
I++ ++ ++++++LFE M+ + M+ + + G+++EA +L
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKL 419
++ + S+ S++ GQ +A ++
Sbjct: 465 NEIPADEASILLESLLGACKRFGQLEQAERI 495
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 144/332 (43%), Gaps = 38/332 (11%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
E +V S N I+ A G + EA+ +FD MP+R V SWN M++ Y+ G Y+E L +
Sbjct: 231 EMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEV 290
Query: 91 ASFM-HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
+ M S K + + +VLS+CA GSL G+ VH + K G E G + +AL+
Sbjct: 291 FNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYS 350
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
+C I + A+++F RDV W ++IS
Sbjct: 351 KCGKIDK-------------------------------ALEVFRATSKRDVSTWNSIISD 379
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLD 268
+ G + AL++F M PN T V+ C +G L A K+ + ++
Sbjct: 380 LSVHGLG-KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVE 438
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
G + + I++A+ + + + + SL+G G++E+AE I
Sbjct: 439 PTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANR 498
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
L E N + GYA S + S +EK+
Sbjct: 499 LLELNLRDSS----GYAQMSNLYASDGRWEKV 526
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 38/251 (15%)
Query: 393 GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQ 452
G N T NS++ Y ++ AL ++ M V + +F+ + +AC + C F++G+
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 453 LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR-----------SFTSIFSP----- 496
+H K+ +V+V LV+ Y + G+ A++ S+ S+ S
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 497 ---------------NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
NV +W +I+GYA GL E+ +F SM V+ V+ ++ A+++
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV----SWNAMVT 276
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE---EFINQMPIE 598
A +H G N+ LE+F+ M P V+ G L + E +I++ IE
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE 336
Query: 599 ADGVIWGALLN 609
+G + AL++
Sbjct: 337 IEGFLATALVD 347
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYS---KCGHLADAQRSFTSIFSPNVAA 500
SL QQ HA + KT + + + LV F + + ++ A I SPN
Sbjct: 51 SLTEIQQA---HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 501 WTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
++I YA ++ +FR ML+ V P+ +F +L AC+ +G +I H +
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI-HGLF 166
Query: 561 ICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
I + + +V++ GRSG + A + +++MP+ D V W +LL+A
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA 215
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 231/416 (55%), Gaps = 4/416 (0%)
Query: 282 CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI 341
C I A +V+ M E + + S+I G +L + A F E + + +N MI
Sbjct: 39 CLMGVIASANKVFCEMV-EKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMI 97
Query: 342 KGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
GY + +++ LF++M +++ S NT++ Y+ G+++ ++FD ERN +WN
Sbjct: 98 SGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP-ERNVFSWN 156
Query: 402 SMMSGYIHNGQHSEALKLYVTM-RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
++ GY NG+ SE L + M SV + +T +++ AC L +F G+ +H +
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 461 TPF-QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
+ + +V V AL+D Y KCG + A F I ++ +W +ING A HG G+E++
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALN 276
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
LF M G+ P+ TFV +L AC H GL+ DGL F+SM + + P IEH CVVDLL
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLL 336
Query: 580 GRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFV 639
R+G L +A EFIN+MP++AD VIW LL AS +K +++GE A E+L L+P + FV
Sbjct: 337 SRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFV 396
Query: 640 ILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSD 695
+LSN+Y GR+ ++ ++ +K+ G SWIE ++ + F + H ++
Sbjct: 397 MLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTE 452
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 161/400 (40%), Gaps = 69/400 (17%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL-ALASFMH 95
V+S N + A G++ +FD+MP R V SWN +I GY+Q GR E L + +
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-VGSALLYFCVRCCGI 154
V N+ + + VLS+CA+ G+ GK VH G+ K + V +AL+ +C I
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAI 240
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
A VF+ G +RD++ +W T+I+G A
Sbjct: 241 EIAMEVFK---------------GIKRRDLI----------------SWNTMINGLAAHG 269
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
G E AL+LF M+ S + P++ T V+ C H G V GL + + D SI
Sbjct: 270 HGTE-ALNLFHEMKNSGISPDKVTFVGVLCACK-----HMGLVEDGLAYFNSMFTDFSIM 323
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
+ C D + A L A I + ++ +I+ L +
Sbjct: 324 PEIEHCGCVVDLLSRA----------GFLTQAVEFINKM----PVKADAVIWATLLGASK 369
Query: 335 ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL------- 387
+ + I A+ I K+ P+N + + ++Y G D+A +L
Sbjct: 370 VYKKVDIGEVALEELI--------KLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDT 421
Query: 388 -FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
F K G T + ++ Y +H +L +R L
Sbjct: 422 GFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 320 EEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNG 379
E ELI + T ++ + + I + ++F +M KN+ +MI+ Y N
Sbjct: 14 ESRELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNK 73
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
+L A + FD + ER+ V WN+M+SGYI G EA L+ M
Sbjct: 74 DLVSARRYFDLSP-ERDIVLWNTMISGYIEMGNMLEARSLFDQM---------------- 116
Query: 440 RACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVA 499
C + S+ +++ Y+ G + +R F + NV
Sbjct: 117 -PCRDVMSWN----------------------TVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHS 558
+W LI GYA +G SE + F+ M+ +G V+PN AT +LSAC+ G + G +
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 559 MQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ + ++D+ G+ G ++ A E + D + W ++N
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMING 264
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED--GCERALD----- 222
VLW+ M+SGY++ M A LF +MP RDV++W T++ GYA D CER D
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 223 ------------------------LFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVV 258
R + V+PN+ T+ V+ CA+LGA GK V
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 259 HGLCIKDGLD-FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
H G + D ++ AL + Y AI+ A V++ + ++ N++I GL G
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLIS-WNTMINGLAAHG 269
Query: 318 RIEEAELIFYGLRETNPISYNLMIKGYAMSSQ----IEKSKRLFEKMAPK-----NLTSL 368
EA +F+ ++ + + G + + +E F M +
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC 329
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
++ + S+ G L +AV+ +K + ++V W +++
Sbjct: 330 GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 167/425 (39%), Gaps = 96/425 (22%)
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
++ +A +F +M ++VV WT++I+GY + DL R ++ P
Sbjct: 43 VIASANKVFCEMVEKNVVLWTSMINGYLLNK-------DLVSARRYFDLSPE-------- 87
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
+D + ++ I G Y + + +A+ +++ M C
Sbjct: 88 --------------------RDIVLWNTMISG-----YIEMGNMLEARSLFDQM---PCR 119
Query: 304 NVA--NSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM- 360
+V N+++ G +G +E E +F + E N S+N +IKGYA + ++ + F++M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 361 -----APKNLTSL-----------------------------------NTMISVYSKNGE 380
P + T N +I +Y K G
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
++ A+++F K R+ ++WN+M++G +G +EAL L+ M+ + + TF +
Sbjct: 240 IEIAMEVFKGIK-RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 441 ACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNV 498
AC + + G ++ + + +VD S+ G L A + +
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 499 AAWTALING---YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
W L+ Y +G ++ L++ N A FV + + AG +D +
Sbjct: 359 VIWATLLGASKVYKKVDIGEVAL----EELIKLEPRNPANFVMLSNIYGDAGRFDDAARL 414
Query: 556 FHSMQ 560
+M+
Sbjct: 415 KVAMR 419
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 188/698 (26%), Positives = 333/698 (47%), Gaps = 71/698 (10%)
Query: 4 FLRFCPVRNCCKRVEKFRLFTTLLRDSEPH--------HPHVISTNISIAHRA------- 48
L F +R+CC ++ L+ + S+ H VI A +
Sbjct: 186 LLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYC 245
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
+L A +F+E+ + SSW TM++ Y+ G ++E L L M V++N+++ ++
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS 305
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
L + A G L G +H ++ G V ++L+ +C GE E+
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC---GELEI--------- 353
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
A LF + RDVV+W+ +I+ Y + + A+ LFR M
Sbjct: 354 -------------------AEQLFINIEDRDVVSWSAMIASYEQAGQH-DEAISLFRDMM 393
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
R + PN TL V++ CA + A GK +H IK ++ + A+ Y
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR--ETNPISYNL--MIKGY 344
A + +E + + + N+L G +G +A ++ ++ P S + M++
Sbjct: 454 PALKAFERLPIKDAVAF-NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Query: 345 AMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
A S + ++ ++ S + +I++++K L A+ LFDK E+++V+W
Sbjct: 513 AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
N MM+GY+ +GQ EA+ + M+ + TF + RA L + + G +H+ L +
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ 632
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILL 520
F + VG +LVD Y+KCG + +++ F I + + +W +++ YA HGL S ++ L
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 521 FRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
F SM + P++ +F+++LSAC HAGL+ +G IF M +++ +EHY C+VDLLG
Sbjct: 693 FLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLG 752
Query: 581 RSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDP-NPISGFV 639
++G EA E + +M ++ +WGALLN+S ++ + A +L L+P NP
Sbjct: 753 KAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNP----- 807
Query: 640 ILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIEL 677
+ Y+ R G+ + + ++K P CSWIE+
Sbjct: 808 ---SHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 154/648 (23%), Positives = 290/648 (44%), Gaps = 61/648 (9%)
Query: 1 MILFLRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMF 60
++L LR C C +V + + L +PH+ + S+ R +R +F
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGL----KPHNQLI--NAYSLFQRQDL-----SRVIF 56
Query: 61 DEMPLRTVSSWNTMISGYSQWGRYDEALALASFM-HRSCVKLNEISFSAVLSSCARSGSL 119
D + V WN+MI GY++ G + EAL +M + ++ SF+ L +CA S
Sbjct: 57 DSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDF 116
Query: 120 FLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGY 179
G ++H L+ + G E +G+AL+ +
Sbjct: 117 KKGLRIHDLIAEMGLESDVYIGTALVEMYCK----------------------------- 147
Query: 180 VQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER-ALDLFRCMRRSEVLPNEFT 238
RD++ +A +F KM V+DVV W T++SG A ++GC AL LF MR V + +
Sbjct: 148 -ARDLV-SARQVFDKMHVKDVVTWNTMVSGLA--QNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
L +I ++L + +HGL IK G F S G L + YC+ + A+ V+E +
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAESVFEEVW 261
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSK 354
+ + +++ G EE +F +R N ++ ++ A + K
Sbjct: 262 RKD-ESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 355 RLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN 410
+ + + L + +++S+YSK GEL+ A +LF + +R+ V+W++M++ Y
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIASYEQA 379
Query: 411 GQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG 470
GQH EA+ L+ M R+ + + T + + + C + + + G+ +H + K ++ +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 471 TALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL 530
TA++ Y+KCG + A ++F + + A+ AL GY G +++ ++++M + GV
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEE 590
P++ T V +L C+ G ++ + I + ++++ + L A
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQI-IKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 591 FINQMPIEADGVIWGALLNASWFWKDIE--VGERAAEKLFSLDPNPIS 636
++ E V W ++N E V K+ PN ++
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 225/377 (59%), Gaps = 4/377 (1%)
Query: 331 ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDK 390
E++ +I YA + ++R+F++M+ +++ N MI+ Y + G++ A++LFD
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD- 172
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRR-LSVDHSRSTFSVLFRACTSLCSFQ 449
+ +N +W +++SG+ NG +SEALK+++ M + SV + T + AC +L +
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP-NVAAWTALINGY 508
G+ L + + F N+YV A ++ YSKCG + A+R F + + N+ +W ++I
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
A HG E++ LF ML +G P+A TFV +L AC H G++ G E+F SM+ ++++P
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLF 628
+EHY C++DLLGR G+L+EA + I MP++ D V+WG LL A F ++E+ E A+E LF
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALF 412
Query: 629 SLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW-IELNNNIHMFSVE 687
L+P VI+SN+YA +W +RK ++ + K G S+ +E+ ++H F+VE
Sbjct: 413 KLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Query: 688 DKTHAYSDVIYATVDHL 704
DK+H S IY ++ +
Sbjct: 473 DKSHPRSYEIYQVLEEI 489
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 182/366 (49%), Gaps = 15/366 (4%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L AR +FD +N +I Y + E++ L + + ++ + +F+ + ++
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
A S + +HS +SGFE + L+ + + A VF+E+ + +W
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE- 231
+ M++GY +R M AM+LF MP ++V +WTT+ISG+++ + E AL +F CM + +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSE-ALKMFLCMEKDKS 210
Query: 232 VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN-SIGGALAEFYCDRDAIDDA 290
V PN T+ V+ CA LG L G+ + G ++G FDN + A E Y ID A
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVA 269
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG-LRE---TNPISYNLMIKGYAM 346
KR++E +G + L NS+IG L G+ +EA +F LRE + +++ ++
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 347 SSQIEKSKRLFE------KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
+ K + LF+ K++PK L MI + + G+L EA L + ++V W
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPK-LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 401 NSMMSG 406
+++
Sbjct: 389 GTLLGA 394
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 56/365 (15%)
Query: 13 CCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWN 72
CC R R+F + + P N I + G++ A +FD MP + V+SW
Sbjct: 134 CCAR----RVFDEMSKRDVP------VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWT 183
Query: 73 TMISGYSQWGRYDEALALASFMHR-SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
T+ISG+SQ G Y EAL + M + VK N I+ +VL +CA G L +G+++ +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 132 SGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
+GF V +A + +C I A+ +FEEL GN
Sbjct: 244 NGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL--GNQ---------------------- 279
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGA 251
R++ +W ++I A + AL LF M R P D V + L
Sbjct: 280 ------RNLCSWNSMIGSLATHGKH-DEALTLFAQMLREGEKP-----DAVTFVGLLLAC 327
Query: 252 LHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD------AIDDAKRVYESMGGEACLNV 305
+H G VV G + ++ + I L + C D + +A + ++M + V
Sbjct: 328 VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVV 387
Query: 306 ANSLIGGLILMGRIEEAEL---IFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP 362
+L+G G +E AE+ + L TNP + +M YA + + + R+ + M
Sbjct: 388 WGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKK 447
Query: 363 KNLTS 367
+ +T
Sbjct: 448 ETMTK 452
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 384 AVKLFDKTKGERNSVT--WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
A KLFD +NS T +N ++ Y + Q E++ LY + + S TF+ +F A
Sbjct: 35 ARKLFDH---HQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAW 501
S S + +LLH+ ++ F+++ + T L+ Y+K G L A+R F + +V W
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 502 TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI 561
A+I GY G ++ LF SM + N ++ ++S S G ++ L++F M+
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEK 207
Query: 562 CYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
V P ++ VV +L L E E
Sbjct: 208 DKSVKP---NHITVVSVLPACANLGELE 232
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 258 bits (660), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 269/522 (51%), Gaps = 11/522 (2%)
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
LF ++ + +LI+G+ E LDLF +R+ + + FT V++ C R
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHE-TLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
+ G +H L +K G + D + +L Y ++DA ++++ + + + +L
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVT-WTALF 184
Query: 311 GGLILMGRIEEAELIFYGLRE--TNPISYNLM------IKGYAMSSQIEKSKRLFEKMAP 362
G GR EA +F + E P SY ++ + + S K + E
Sbjct: 185 SGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ 244
Query: 363 KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
KN T++++Y+K G++++A +FD + E++ VTW++M+ GY N E ++L++
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFD-SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
M + ++ + + +C SL + G+ + + + F N+++ AL+D Y+KCG
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 483 LADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+A F + ++ A I+G A +G S +F G+ P+ +TF+ +L
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGV 602
C HAGL+ DGL F+++ Y + T+EHY C+VDL GR+G L +A I MP+ + +
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 603 IWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQ 662
+WGALL+ KD ++ E ++L +L+P +V LSN+Y++ GRW + +R +
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 663 SLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
++K PG SWIEL +H F +DK+H SD IYA ++ L
Sbjct: 544 KKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDL 585
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 164/369 (44%), Gaps = 48/369 (13%)
Query: 50 TGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAV 109
+G L +A +FDE+P R+V +W + SGY+ GR+ EA+ L M VK + V
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
LS+C G L G+ + + + +K V + L+ +C + +A VF+ + + +
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRR 229
V WS M+ GY A + F K ++LF M +
Sbjct: 279 VTWSTMIQGY--------ASNSFPK------------------------EGIELFLQMLQ 306
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI--GGALAEFYCDRDAI 287
+ P++F++ + CA LGAL G+ G+ + D +F ++ AL + Y A+
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS-----YNLMIK 342
V++ M E + + N+ I GL G ++ + +F G E IS + ++
Sbjct: 365 ARGFEVFKEM-KEKDIVIMNAAISGLAKNGHVKLSFAVF-GQTEKLGISPDGSTFLGLLC 422
Query: 343 GYAMSSQIEKSKRLFEKMA-----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
G + I+ R F ++ + + M+ ++ + G LD+A +L N+
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 398 VTWNSMMSG 406
+ W +++SG
Sbjct: 483 IVWGALLSG 491
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 191/490 (38%), Gaps = 106/490 (21%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS 118
+F + +N++I+G+ + E L L + + + L+ +F VL +C R+ S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 119 LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSG 178
LG +HSL++K GF ++LL + +A +F+E+ D + V W+ + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
Y SG R A+DLF+ M V P+ +
Sbjct: 187 YTT--------------------------SGRHR------EAIDLFKKMVEMGVKPDSYF 214
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+ V+ C +G L +G+ + + E M
Sbjct: 215 IVQVLSACVHVGDLDSGEWI--------------------------------VKYMEEME 242
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
+ V +L+ G++E+A +F + E + ++++ MI+GYA +S ++ LF
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 359 KMAPKN------------------------------------LTSL---NTMISVYSKNG 379
+M +N LT+L N +I +Y+K G
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
+ ++F + K E++ V N+ +SG NG + ++ +L + STF L
Sbjct: 363 AMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 440 RACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPN 497
C Q G + +A + V +VD + + G L DA R + PN
Sbjct: 422 CGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 498 VAAWTALING 507
W AL++G
Sbjct: 482 AIVWGALLSG 491
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G++ +AR +FD M + + +W+TMI GY+ E + L M + +K ++ S
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
LSSCA G+L LG+ SL+ + F + +AL+ +C + VF+E+++
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGK 194
+ V+ + +SG + + + +FG+
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 453 LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHG 512
L++ HL F N+ + L +K +L + F PN+ + +LING+ +
Sbjct: 36 LINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF-----PNIFLYNSLINGFVNNH 90
Query: 513 LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
L E++ LF S+ G+ + TF +L AC+ A G+++ HS+ + +
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL-HSLVVKCGFNHDVAAM 149
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
T ++ + SGRL +A + +++P + V W AL +
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTALFSG 186
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 256/489 (52%), Gaps = 13/489 (2%)
Query: 224 FRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCD 283
+R MRR+ V+P+ T +++ +L + + H +K GLD D + +L Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKG 343
D A R+++ + + ++I G + G EA + F +++T + + +
Sbjct: 151 SGLFDFASRLFDGAEDKDVVT-WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS 209
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSL---------NTMISVYSKNGELDEAVKLFDKTKGE 394
++ + R + L + ++++ +Y K D+A K+FD+
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS- 268
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
RN VTW ++++GY+ + + + ++ M + V + T S + AC + + +G+ +
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
H ++ K + N GT L+D Y KCG L +A F + NV WTA+ING+A HG
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC 574
++ LF +ML V PN TF+A+LSAC+H GL+ +G +F SM+ + + P +HY C
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC 448
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNP 634
+VDL GR G L+EA+ I +MP+E V+WGAL + KD E+G+ AA ++ L P+
Sbjct: 449 MVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSH 508
Query: 635 ISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMF-SVEDKTHAY 693
+ +L+N+Y+ W + +RK+++ ++ K PG SWIE+ + F + +DK
Sbjct: 509 SGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLE 568
Query: 694 SDVIYATVD 702
SD +Y T+D
Sbjct: 569 SDDLYKTLD 577
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 184/400 (46%), Gaps = 58/400 (14%)
Query: 27 LRDSEPH--HPHVIS---------TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMI 75
LRDS P H H++ N I+ + +G A +FD + V +W MI
Sbjct: 117 LRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMI 176
Query: 76 SGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE 135
G+ + G EA+ M ++ V NE++ +VL + + + G+ VH L L++G
Sbjct: 177 DGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV 236
Query: 136 KFGL-VGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGK 194
K + +GS+L+ +C +A+ VF+E
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKVFDE------------------------------- 265
Query: 195 MPVRDVVAWTTLISGYARREDGC-ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALH 253
MP R+VV WT LI+GY + C ++ + +F M +S+V PNE TL V+ CA +GALH
Sbjct: 266 MPSRNVVTWTALIAGYVQSR--CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALH 323
Query: 254 AGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGL 313
G+ VH IK+ ++ + + G L + Y +++A V+E + E + ++I G
Sbjct: 324 RGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-HEKNVYTWTAMINGF 382
Query: 314 ILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMA------PK 363
G +A +FY + + N +++ ++ A +E+ +RLF M PK
Sbjct: 383 AAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPK 442
Query: 364 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
M+ ++ + G L+EA L ++ E +V W ++
Sbjct: 443 A-DHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 259/484 (53%), Gaps = 14/484 (2%)
Query: 238 TLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM 297
T D ++ C RL ++ K V+G + +G + + + + + I DA+R+++ +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 298 GGEACLNVANSLIGGLILMGRIEEA----ELIFYGLRETNPISYNLMIKGYAMSSQIEKS 353
E L S+I G + G EA ++++ L + ++ +M++ A I
Sbjct: 185 P-ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 354 KRLFE---KMAPKNLTSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH 409
K+L K+ + T ++ +I +YSK G++++A F+ E+ +V WN++++GY
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE-CMPEKTTVAWNNVIAGYAL 302
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
+G EAL L MR V + T S++ R T L + + HA L + F++ +
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
TALVDFYSK G + A+ F + N+ +W AL+ GYA HG G++++ LF M+ V
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
PN TF+A+LSAC+++GL G EIF SM + + P HY C+++LLGR G L EA
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 590 EFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILG 649
FI + P++ +W ALLNA +++E+G AEKL+ + P + +V++ NMY +G
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 650 RWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDV----IYATVDHLT 705
+ + + + L+S L P C+W+E+ + H F D+ +Y++ IY VD L
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELM 602
Query: 706 ATIN 709
I+
Sbjct: 603 EEIS 606
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 179/412 (43%), Gaps = 52/412 (12%)
Query: 5 LRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMP 64
+R +R C KRV F + S P N + K G + +AR +FDE+P
Sbjct: 134 IRLKSIR-CVKRVYGFMM-------SNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP 185
Query: 65 LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQ 124
R + S+ ++ISG+ +G Y EA L M +F+ +L + A GS+++GKQ
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 125 VHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDM 184
+H LK G V L+ +C I +A FE + + V W+ +++GY
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA---- 301
Query: 185 MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
+ GY+ E AL L MR S V ++FTL +IR
Sbjct: 302 ----------------------LHGYS------EEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
I +L L K H I++G + + AL +FY +D A+ V++ + + ++
Sbjct: 334 ISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
Query: 305 VANSLIGGLILMGRIEEAELIFYGLRETNP----ISYNLMIKGYAMSSQIEKSKRLFEKM 360
N+L+GG GR +A +F + N +++ ++ A S E+ +F M
Sbjct: 394 -WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 361 A------PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
+ P+ + MI + ++G LDEA+ + + W ++++
Sbjct: 453 SEVHGIKPRAM-HYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 47/437 (10%)
Query: 83 RYDEALALASFMHRSC-VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVG 141
R+ EA L + C K+ ++ A++ +C R S+ K+V+ ++ +GFE +
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 142 SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV 201
+ +L V+C I +A +F+E+ P R++
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEI-------------------------------PERNLY 190
Query: 202 AWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
++ ++ISG+ + E A +LF+ M T ++R A LG+++ GK +H
Sbjct: 191 SYYSIISGFVNFGNYVE-AFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVC 249
Query: 262 CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE 321
+K G+ + + L + Y I+DA+ +E M E N++I G L G EE
Sbjct: 250 ALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECM-PEKTTVAWNNVIAGYALHGYSEE 308
Query: 322 AELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKR----LFEKMAPKNLTSLNTMIS 373
A + Y +R++ + + ++MI+ +++E +K+ L + + ++
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
YSK G +D A +FDK +N ++WN++M GY ++G+ ++A+KL+ M +V +
Sbjct: 369 FYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHV 427
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFT- 491
TF + AC +QG + +S+ + +++ + G L D +F
Sbjct: 428 TFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDG-LLDEAIAFIR 486
Query: 492 -SIFSPNVAAWTALING 507
+ V W AL+N
Sbjct: 487 RAPLKTTVNMWAALLNA 503
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
Query: 386 KLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR-RLSVDHSRSTFSVLFRACTS 444
++ D T+ ++ VT S + + + EA +L+ + R S ST+ L AC
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIR 135
Query: 445 LCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTAL 504
L S + + ++ + F+ Y+ ++ + KCG + DA+R F I N+ ++ ++
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 505 INGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYR 564
I+G+ G E+ LF+ M + TF +L A + G + G + +C
Sbjct: 196 ISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG----KQLHVCAL 251
Query: 565 VTPTIEH--YTC-VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+++ +C ++D+ + G +++A MP E V W ++
Sbjct: 252 KLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVI 297
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 262/506 (51%), Gaps = 45/506 (8%)
Query: 234 PNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRV 293
P T +I++C++ AL GK VH G I L Y ++ DA++V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 294 YESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKS 353
++ M L N ++ G +G +EEA +F + E + S+ M+ GY Q E++
Sbjct: 143 FDEMPNRD-LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 354 KRLFEKM--APKNLTSL--------------------------------------NTMIS 373
L+ M P + ++ ++++
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y K G +DEA +FDK E++ V+W SM+ Y + + E L+ + +
Sbjct: 262 MYGKCGCIDEARNIFDKIV-EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
TF+ + AC L + + G+ +H ++++ F + ++LVD Y+KCG++ A+
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
P++ +WT+LI G A +G E++ F +L G P+ TFV +LSAC+HAGL+ GL
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWF 613
E F+S+ +R++ T +HYTC+VDLL RSGR ++ + I++MP++ +W ++L
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 614 WKDIEVGERAAEKLFSLDP-NPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGC 672
+ +I++ E AA++LF ++P NP++ +V ++N+YA G+W ++ +RKR+Q + + K PG
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVT-YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGS 559
Query: 673 SWIELNNNIHMFSVEDKTHA-YSDVI 697
SW E+ H+F D +H Y+ ++
Sbjct: 560 SWTEIKRKRHVFIAADTSHPMYNQIV 585
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 218/471 (46%), Gaps = 23/471 (4%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
++ ++ C+++ +L GK+VH + SGF ++ + LL +C + +A VF+E+
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
+ + W++M++GY + ++ A LF +M +D +WT +++GY ++ D E AL L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK-DQPEEALVLY 205
Query: 225 RCMRR-SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCD 283
M+R PN FT+ + A + + GK +HG ++ GLD D + +L + Y
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNL 339
ID+A+ +++ + + ++ S+I R E +F L N ++
Sbjct: 266 CGCIDEARNIFDKIVEKDVVS-WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAG 324
Query: 340 MIKGYAMSSQIEKSKRLFEKMA-----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
++ A + E K++ M P + S ++++ +Y+K G ++ A + D +
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFAS-SSLVDMYTKCGNIESAKHVVDGCP-K 382
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG-QL 453
+ V+W S++ G NGQ EALK + + + TF + ACT ++G +
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
++ K T LVD ++ G + + + P+ W +++ G + +G
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 513 ---LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
L E+ L + N T+V + + + AG + ++ MQ
Sbjct: 503 NIDLAEEAA----QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 175/387 (45%), Gaps = 22/387 (5%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P ++ N + AK G L +AR +FDEMP R + SWN M++GY++ G +EA L M
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYF------C 148
+ + S++A+++ + ++SL+ + + + ++ C
Sbjct: 178 ----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
+R +V L D + VLWS ++ Y + + A ++F K+ +DVV+WT++I
Sbjct: 234 IRRGKEIHGHIVRAGL-DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
Y + E LF + S PNE+T V+ CA L GK VHG + G D
Sbjct: 293 RYFKSSRWRE-GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA----EL 324
+ +L + Y I+ AK V + + L SLIGG G+ +EA +L
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGC-PKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 325 IFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT-----MISVYSKNG 379
+ + + +++ ++ + +EK F + K+ S + ++ + +++G
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSG 470
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSG 406
++ + + + + W S++ G
Sbjct: 471 RFEQLKSVISEMPMKPSKFLWASVLGG 497
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/647 (27%), Positives = 314/647 (48%), Gaps = 69/647 (10%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
R + + +S ++ +A++ + + ++L +++L C + SL GK +
Sbjct: 9 RPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMM 185
H L +GF++ N +L + ++ Y++
Sbjct: 69 HRHLKITGFKR------------------------------PNTLLSNHLIGMYMKCGKP 98
Query: 186 GNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRI 245
+A +F +M +R++ +W ++SGY + RA +F M +V+ + + ++
Sbjct: 99 IDACKVFDQMHLRNLYSWNNMVSGYVK-SGMLVRARVVFDSMPERDVV----SWNTMVIG 153
Query: 246 CARLGALHAGKVVHGLCIKDGLDFDN-SIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
A+ G LH + + G+ F+ S G L AC+
Sbjct: 154 YAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT----------------------ACVK 191
Query: 305 VANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN 364
+ + R +++ G +S ++ I YA Q+E +KR F++M K+
Sbjct: 192 SRQ------LQLNRQAHGQVLVAGFLSNVVLSCSI-IDAYAKCGQMESAKRCFDEMTVKD 244
Query: 365 LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
+ T+IS Y+K G+++ A KLF + E+N V+W ++++GY+ G + AL L+ M
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMP-EKNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
L V + TFS A S+ S + G+ +H ++ +T + N V ++L+D YSK G L
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 485 DAQRSFTSIFSP-NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
++R F + W +I+ A HGLG +++ + M+ V PN T V IL+AC
Sbjct: 364 ASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNAC 423
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
SH+GL+ +GL F SM + + + P EHY C++DLLGR+G KE I +MP E D I
Sbjct: 424 SHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI 483
Query: 604 WGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQS 663
W A+L + E+G++AA++L LDP + +++LS++YA G+W +R ++
Sbjct: 484 WNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKK 543
Query: 664 LELRKDPGCSWIELNNNIHMFSVEDKTHAYS--DVIYATVDHLTATI 708
+ K+ SWIE+ + F+V D +HA++ + IY + +L A I
Sbjct: 544 RRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVI 590
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 201/403 (49%), Gaps = 18/403 (4%)
Query: 12 NCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSW 71
C K ++ ++F + H ++ S N ++ K+G L AR +FD MP R V SW
Sbjct: 94 KCGKPIDACKVFDQM------HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
NTM+ GY+Q G EAL RS +K NE SF+ +L++C +S L L +Q H +L
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 132 SGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
+GF ++ +++ +C + A+ F+E+ + +W+ ++SGY + M A L
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGA 251
F +MP ++ V+WT LI+GY R+ G RALDLFR M V P +FT + A + +
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSG-NRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326
Query: 252 LHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG 311
L GK +HG I+ + + + +L + Y +++ ++RV+ + N++I
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 312 GLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK--- 363
L G +A ++I + + + N + +++ + S +E+ R FE M +
Sbjct: 387 ALAQHGLGHKALRMLDDMIKFRV-QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 364 --NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+ +I + + G E ++ ++ E + WN+++
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 232/452 (51%), Gaps = 42/452 (9%)
Query: 305 VANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA--- 361
+ + L+G + +G AE +F + E + +S+N +I GY+ + K + +M
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE 127
Query: 362 ----PKNLTSL----------------------------------NTMISVYSKNGELDE 383
P +T L N I+ Y K G+L
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
+ KLF+ +N V+WN+M+ ++ NG + L + RR+ + ++TF + R+C
Sbjct: 188 SCKLFEDLS-IKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA 503
+ + Q +H + F N + TAL+D YSK G L D+ F I SP+ AWTA
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
++ YA HG G ++I F M+ G+ P+ TF +L+ACSH+GL+ +G F +M Y
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRY 366
Query: 564 RVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERA 623
R+ P ++HY+C+VDLLGRSG L++A I +MP+E +WGALL A +KD ++G +A
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKA 426
Query: 624 AEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHM 683
AE+LF L+P +V+LSN+Y+ G W + IR ++ L + GCS+IE N IH
Sbjct: 427 AERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHK 486
Query: 684 FSVEDKTHAYSDVIYATVDHLTATINSIIPFN 715
F V D +H S+ I + + + S + +
Sbjct: 487 FVVGDWSHPESEKIQKKLKEIRKKMKSEMGYK 518
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 165/363 (45%), Gaps = 50/363 (13%)
Query: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV--KLNEISFSAVLSSC 113
A +FDEMP R + SWN++ISGYS G + + S M S V + NE++F +++S+C
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 114 ARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWS 173
GS G+ +H L++K G V EE++ N
Sbjct: 145 VYGGSKEEGRCIHGLVMKFG--------------------------VLEEVKVVN----- 173
Query: 174 LMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERALDLFRCMRRSEV 232
++ Y + + ++ LF + ++++V+W T+I ++G E+ L F RR
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI--VIHLQNGLAEKGLAYFNMSRRVGH 231
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKR 292
P++ T V+R C +G + + +HGL + G + I AL + Y ++D+
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 293 VY------ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAM 346
V+ +SM A L + G + E ++ YG+ + +++ ++ +
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE--LMVHYGI-SPDHVTFTHLLNACSH 348
Query: 347 SSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
S +E+ K FE M+ + L + M+ + ++G L +A L + E +S W
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 402 SMM 404
+++
Sbjct: 409 ALL 411
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 13/245 (5%)
Query: 40 TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV 99
N I KTG+L + +F+++ ++ + SWNTMI + Q G ++ LA + R
Sbjct: 172 VNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH 231
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+ ++ +F AVL SC G + L + +H L++ GF + +ALL + + ++
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLF------GKMPVRDVVAWTTLISGYARR 213
VF E+ + + W+ ML+ Y +A+ F G P D V +T L++
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP--DHVTFTHLLNA-CSH 348
Query: 214 EDGCERALDLFRCM-RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
E F M +R + P C++ + R G L +GL + ++ +
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA---YGLIKEMPMEPSSG 405
Query: 273 IGGAL 277
+ GAL
Sbjct: 406 VWGAL 410
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 433 STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
+ S L A S S + +LLH + K+ + ++G LV Y + GH A++ F
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 493 IFSPNVAAWTALINGYAYHG-LGSESILLFRSMLVQ-GVLPNAATFVAILSACSHAGLLN 550
+ ++ +W +LI+GY+ G LG +L R M+ + G PN TF++++SAC + G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 551 DGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+G H + + + V ++ ++ G++G L + + + I+ + V W ++
Sbjct: 152 EG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 260/484 (53%), Gaps = 16/484 (3%)
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
E P++ T + +I C +L VH + +G D D + L Y D ++D
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYA 345
A++V++ + + V N+L L L G EE +++ + E++ +Y ++K
Sbjct: 131 ARKVFDKTR-KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 346 MS----SQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNS 397
S + + K K + + + +S + T++ +Y++ G +D A +F RN
Sbjct: 190 ASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP-VRNV 248
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL--FRACTSLCSFQQGQLLH 455
V+W++M++ Y NG+ EAL+ + M R + D S ++ +++ +AC SL + +QG+L+H
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
++ + + + V +ALV Y +CG L QR F + +V +W +LI+ Y HG G
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
++I +F ML G P TFV++L ACSH GL+ +G +F +M + + P IEHY C+
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
VDLLGR+ RL EA + + M E +WG+LL + ++E+ ERA+ +LF+L+P
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNA 488
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSD 695
+V+L+++YA W + ++K L+ L+K PG W+E+ ++ F D+ + +
Sbjct: 489 GNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLME 548
Query: 696 VIYA 699
I+A
Sbjct: 549 QIHA 552
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 48/369 (13%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G + AR +FD+ RT+ WN + + G +E L L M+R V+ + +++ VL
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 111 SSCARS----GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
+C S L GK++H+ L + G+ + + L+ R + A VF
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF----- 240
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
G MPVR+VV+W+ +I+ YA+ E AL FR
Sbjct: 241 --------------------------GGMPVRNVVSWSAMIACYAKNGKAFE-ALRTFRE 273
Query: 227 MRR--SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
M R + PN T+ V++ CA L AL GK++HG ++ GLD + AL Y
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLM 340
++ +RV++ M ++ NSLI + G ++A IF + P+++ +
Sbjct: 334 GKLEVGQRVFDRMHDRDVVS-WNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 341 IKGYAMSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
+ + +E+ KRLFE M + M+ + + LDEA K+ + E
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 396 NSVTWNSMM 404
W S++
Sbjct: 453 GPKVWGSLL 461
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 152/354 (42%), Gaps = 53/354 (14%)
Query: 26 LLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYD 85
L R H ++++T + + A+ G + A ++F MP+R V SW+ MI+ Y++ G+
Sbjct: 208 LTRRGYSSHVYIMTTLVDMY--ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 86 EALALASFMHRSC--VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSA 143
EAL M R N ++ +VL +CA +L GK +H +L+ G + V SA
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 144 LLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAW 203
L+ RC + + VF+ + D + V W+ ++S Y
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG----------------------- 362
Query: 204 TTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
+ GY + +A+ +F M + P T V+ C+ H G V G +
Sbjct: 363 ---VHGYGK------KAIQIFEEMLANGASPTPVTFVSVLGACS-----HEGLVEEGKRL 408
Query: 264 KDGLDFDNSIGGALAEFYCDRD------AIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
+ + D+ I + + C D +D+A ++ + M E V SL+G + G
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Query: 318 RIEEAELI---FYGLRETNPISYNLMIKGYA---MSSQIEKSKRLFEKMAPKNL 365
+E AE + L N +Y L+ YA M ++++ K+L E + L
Sbjct: 469 NVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 182/461 (39%), Gaps = 58/461 (12%)
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
S N +I + G+ +A+ + S ++ ++ ++ C SL +VH +
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQESSP----SQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 130 LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAM 189
L +G ++ + + L+ + A VF++ R
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK----------------------- 140
Query: 190 DLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA-- 247
R + W L G E L L+ M R V + FT V++ C
Sbjct: 141 --------RTIYVWNALFRALTLAGHG-EEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191
Query: 248 --RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNV 305
+ L GK +H + G I L + Y +D A V+ GG NV
Sbjct: 192 ECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF---GGMPVRNV 248
Query: 306 A--NSLIGGLILMGRIEEAELIFYG-LRET-----NPISYNLMIKGYAMSSQIEKSKRLF 357
+++I G+ EA F +RET N ++ +++ A + +E+ K +
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 358 EKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH 413
+ + L S ++ ++++Y + G+L+ ++FD+ +R+ V+WNS++S Y +G
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHGYG 367
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTA 472
+A++++ M + TF + AC+ ++G+ L + + + +
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 473 LVDFYSKCGHLADAQRSFTSIFS-PNVAAWTALINGYAYHG 512
+VD + L +A + + + P W +L+ HG
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 201/343 (58%), Gaps = 2/343 (0%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
N+++ +Y+ G++ A K+FDK E++ V WNS+++G+ NG+ EAL LY M +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI 85
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
T L AC + + G+ +H ++ K N++ L+D Y++CG + +A+
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM-LVQGVLPNAATFVAILSACSHAG 547
F + N +WT+LI G A +G G E+I LF+ M +G+LP TFV IL ACSH G
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
++ +G E F M+ Y++ P IEH+ C+VDLL R+G++K+A E+I MP++ + VIW L
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
L A D ++ E A ++ L+PN +V+LSNMYA RW IRK++ ++
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 668 KDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINS 710
K PG S +E+ N +H F + DK+H SD IYA + +T + S
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 368
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 47/323 (14%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A G++A A +FD+MP + + +WN++I+G+++ G+ +EALAL + M+ +K + +
Sbjct: 34 ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 93
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++LS+CA+ G+L LGK+VH ++K G + + LL RC + EA+ +F+E+ D
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N V W+ ++ +G A++ FGK A++LF+ M
Sbjct: 154 NSVSWTSLI--------VGLAVNGFGK------------------------EAIELFKYM 181
Query: 228 RRSE-VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
+E +LP E T ++ C+ H G V G + + I + F C D
Sbjct: 182 ESTEGLLPCEITFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 287 IDDA---KRVYE---SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI---SY 337
+ A K+ YE SM + + + +L+G + G + AE + + P Y
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 338 NLMIKGYAMSSQIEKSKRLFEKM 360
L+ YA + +++ ++M
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQM 319
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
G+ +H+ + ++ F + +YV +L+ Y+ CG +A A + F + ++ AW ++ING+A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
+G E++ L+ M +G+ P+ T V++LSAC+ G L G + H I +T +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV-HVYMIKVGLTRNLH 125
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
++DL R GR++EA+ ++M ++ + V W +L+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 51/372 (13%)
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYV 180
LG+ +HS++++SGF V ++LL+ C + A VF+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD------------------ 47
Query: 181 QRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERALDLFRCMRRSEVLPNEFTL 239
KMP +D+VAW ++I+G+A E+G E AL L+ M + P+ FT+
Sbjct: 48 -------------KMPEKDLVAWNSVINGFA--ENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
++ CA++GAL GK VH IK GL + L + Y +++AK +++ M
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRETN---PISYNLMIKGYAMS------SQI 350
+ ++ SLI GL + G +EA +F + T P + YA S
Sbjct: 153 KNSVS-WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 351 EKSKRLFE--KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
E +R+ E K+ P+ + M+ + ++ G++ +A + + N V W +++
Sbjct: 212 EYFRRMREEYKIEPR-IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRS--TFSVLFRACTSLCSFQQ--GQLLHAHLSKTPFQ 464
+G A + + +L +HS S ++ + Q+ Q+L + K P
Sbjct: 271 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 330
Query: 465 ANVYVGTALVDF 476
+ V VG + +F
Sbjct: 331 SLVEVGNRVHEF 342
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 174/610 (28%), Positives = 304/610 (49%), Gaps = 47/610 (7%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+FS +L C S+ K + + +LKSGF + GS L+ ++C I A VF
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVF--- 122
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
DG M R +V W +LI+ Y + + A++++
Sbjct: 123 -DG---------------------------MSERHIVTWNSLIA-YLIKHRRSKEAVEMY 153
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS-IGGALAEFYCD 283
R M + VLP+E+TL V + + L + HGL + GL+ N +G AL + Y
Sbjct: 154 RLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 213
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNL 339
+AK V + + E + + +LI G G EA F + + N +Y
Sbjct: 214 FGKTREAKLVLDRVE-EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
++ I K + M L S +++++Y + +D+++++F K
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF-KCIEYP 331
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
N V+W S++SG + NG+ AL + M R S+ + T S R C++L F++G+ +H
Sbjct: 332 NQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH 391
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
++K F + Y G+ L+D Y KCG A+ F ++ +V + +I YA +G G
Sbjct: 392 GIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
E++ LF M+ G+ PN T +++L AC+++ L+ +G E+F S + ++ T +HY C+
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACM 510
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
VDLLGR+GRL+EAE ++ I D V+W LL+A + +E+ ER K+ ++P
Sbjct: 511 VDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDE 569
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK-THAYS 694
+++SN+YA G+W + ++ +++ ++L+K+P SW+E+N H F D +H S
Sbjct: 570 GTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNS 629
Query: 695 DVIYATVDHL 704
+ I ++ L
Sbjct: 630 EQILENLEEL 639
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 217/491 (44%), Gaps = 53/491 (10%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P IS + + K G++ AR +FD M R + +WN++I+ + R EA+ + M
Sbjct: 97 PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-VGSALLYFCVRCCG 153
+ V +E + S+V + + ++ H L + G E + VGSAL+ V+
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
EA+LV + + + + VL + ++ GY Q+
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKG------------------------------ 246
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
ED A+ F+ M +V PNE+T V+ C L + GK++HGL +K G + +
Sbjct: 247 ED--TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN-----SLIGGLILMGRIEEAELIFYG 328
+L Y +DD+ RV++ C+ N SLI GL+ GR E A + F
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFK------CIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358
Query: 329 -LRET-NPISYNL--MIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGE 380
+R++ P S+ L ++G + + E+ +++ + ++ + + +I +Y K G
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
D A +FD T E + ++ N+M+ Y NG EAL L+ M L + + T +
Sbjct: 419 SDMARLVFD-TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 441 ACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA 500
AC + ++G L K +VD + G L +A+ T + +P++
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVL 537
Query: 501 WTALINGYAYH 511
W L++ H
Sbjct: 538 WRTLLSACKVH 548
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 167/398 (41%), Gaps = 84/398 (21%)
Query: 20 FRLFTTLLRDSEPHHPHVIS-------TNISIAHR-----AKTGELAEARHMFDEMPLRT 67
F+ F+ L + E H ++ +N+ + K G+ EA+ + D + +
Sbjct: 172 FKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKD 231
Query: 68 VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHS 127
V +I GYSQ G EA+ M V+ NE ++++VL SC + GK +H
Sbjct: 232 VVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHG 291
Query: 128 LLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGN 187
L++KSGFE ++LL +RC + ++ VF+ + N V W+ ++SG VQ
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG---- 347
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
RE E AL FR M R + PN FTL +R C+
Sbjct: 348 -------------------------RE---EMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
L G+ +HG+ K G D D G L + Y G C ++
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLY----------------GKCGCSDM-- 421
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM-----AP 362
A L+F L E + IS N MI YA + ++ LFE+M P
Sbjct: 422 --------------ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 363 KNLTSLNTMISVYSKNGEL-DEAVKLFDKTKGERNSVT 399
++T L+ +++ N L +E +LFD + ++ +T
Sbjct: 468 NDVTVLSVLLAC--NNSRLVEEGCELFDSFRKDKIMLT 503
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 419 LYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYS 478
L +T L+ H+ FS L R C S + + AH+ K+ F A + G+ LVD
Sbjct: 55 LCITCDTLTTTHN---FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASL 110
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
KCG + A++ F + ++ W +LI H E++ ++R M+ VLP+ T +
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 539 ILSACSHAGLLND-----GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFIN 593
+ A S L + GL + +++ + + +VD+ + G+ +EA+ ++
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEV-----SNVFVGSALVDMYVKFGKTREAKLVLD 225
Query: 594 QMPIEADGVIWGALL 608
++ E D V+ AL+
Sbjct: 226 RVE-EKDVVLITALI 239
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 190/733 (25%), Positives = 337/733 (45%), Gaps = 103/733 (14%)
Query: 41 NISIAHRAKTGEL-AEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV 99
N ++ AK G + +A FD + + V SWN +I+G+S+ +A M +
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT 220
Query: 100 KLNEISFSAVLSSCA---RSGSLFLGKQVHSLLL-KSGFEKFGLVGSALLYFCVRCCGIG 155
+ N + + VL CA ++ + G+Q+HS ++ +S + V ++L+ F +R I
Sbjct: 221 EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIE 280
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
EA LF +M +D+V+W +I+GYA
Sbjct: 281 EAA-------------------------------SLFTRMGSKDLVSWNVVIAGYA---S 306
Query: 216 GCE--RALDLFR-CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDN 271
CE +A LF + + +V P+ T+ ++ +CA+L L +GK +H ++ L D
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 272 SIGGALAEFYCD-------------------------RDAIDDAKRVYE------SMGGE 300
S+G AL FY DA D+ + ++ + E
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNE 426
Query: 301 A--------------CLNVANSLIGGLILMGRIEEAE--LIFYGL--RETNPISYNLMIK 342
A C+NV +G+++E + GL E P N ++
Sbjct: 427 AITLDSVTILSLLKFCINVQG--------IGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478
Query: 343 GYAMSSQIEKSKRLFEKMAPK-NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
YA +E + ++F ++ + L S N+++S Y +G D+A LF + + TW+
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS-TTDLTTWS 537
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
M+ Y + +EA+ ++ ++ + + T L C L S + H ++ +
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG 597
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLF 521
++ + L+D Y+KCG L A F S ++ +TA++ GYA HG G E+++++
Sbjct: 598 GL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 522 RSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGR 581
M + P+ +L+AC HAGL+ DGL+I+ S++ + + PT+E Y C VDL+ R
Sbjct: 657 SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIAR 716
Query: 582 SGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVIL 641
GRL +A F+ QMP+E + IWG LL A + +++G A L + + V++
Sbjct: 717 GGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLI 776
Query: 642 SNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATV 701
SNMYA +W +R ++ E++K GCSW+E++ ++F D +H D I+ V
Sbjct: 777 SNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLV 836
Query: 702 DHLTATINSIIPF 714
+ L + + F
Sbjct: 837 NALYLQMKEPVVF 849
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 215/515 (41%), Gaps = 78/515 (15%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFM 94
HV N ++ + G + EA +F M + + SWN +I+GY+ + +A L + +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE-KFGLVGSALLYFCVRCCG 153
H+ V + ++ ++L CA+ L GK++HS +L+ + + VG+AL+ F R
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR--- 378
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
D + W+ F M +D+++W ++ +A
Sbjct: 379 ----------FGDTSAAYWA------------------FSLMSTKDIISWNAILDAFADS 410
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN-- 271
+ L + + L + T+ +++ C + + K VHG +K GL D
Sbjct: 411 PKQFQFLNLLHHLLNEAITL-DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEE 469
Query: 272 -SIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
+G AL + Y ++ A +++ + L NSL+ G + G ++A+++F +
Sbjct: 470 PKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS 529
Query: 331 ETNPISYNLMIKGYAMSSQIEKSKRLFEK-----MAPKNLTSLN---------------- 369
T+ +++LM++ YA S ++ +F + M P +T +N
Sbjct: 530 TTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQ 589
Query: 370 -----------------TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
T++ VY+K G L A +F ++ R+ V + +M++GY +G+
Sbjct: 590 CHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVF-QSDARRDLVMFTAMVAGYAVHGR 648
Query: 413 HSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGT 471
EAL +Y M ++ + + AC Q G Q+ + + + +
Sbjct: 649 GKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYA 708
Query: 472 ALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALI 505
VD ++ G L DA T + PN W L+
Sbjct: 709 CAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/585 (21%), Positives = 231/585 (39%), Gaps = 148/585 (25%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYS-QWGRYDEALALASFMHRSC-VKLNEIS 105
AK + + + MF +M WN +++G S GR E + MH + K + ++
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVT 124
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI-GEAELVFEEL 164
F+ VL C R G + GK +HS ++K+G EK LVG+AL+ + I +A F+ +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
D + V W+ +++G+ + +MM +A F C
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSF------------------------C------- 213
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLG---ALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
M + PN T+ V+ +CA + A +G+ +H +
Sbjct: 214 -LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV------------------ 254
Query: 282 CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI 341
+R + C NSL+ + +GRIEEA +F + + +S+N++I
Sbjct: 255 ---------QRSWLQTHVFVC----NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVI 301
Query: 342 KGYAMSSQIEKSKRLFEKMAPK------------------NLTSL--------------- 368
GYA + + K+ +LF + K LT L
Sbjct: 302 AGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY 361
Query: 369 --------NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
N +IS Y++ G+ A F ++ ++WN+++ + + + + L L
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAF-SLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF---QANVYVGTALVDFY 477
+ ++ T L + C ++ + + +H + K + +G AL+D Y
Sbjct: 421 HHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 478 SKCGHLA--------------------------------DAQRSFTSIFSPNVAAWTALI 505
+KCG++ DAQ FT + + ++ W+ ++
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV 540
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
YA +E+I +FR + +G+ PN T + +L C+ L+
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLH 585
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 167/352 (47%), Gaps = 22/352 (6%)
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER-ALDLFRCMR-RSEV 232
+L+ Y + M + +F +M D V W +++G + C R + F+ M E
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV---SCGRETMRFFKAMHFADEP 118
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI-DDAK 291
P+ T V+ +C RLG + GK +H IK GL+ D +G AL Y I DA
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 292 RVYESMGGEACLNVANSLIGGLILMGRIEEAELIF-YGLRETNPISYNLMIKGYAMSSQI 350
++ + + ++ N++I G + +A F L+E +Y + + + +
Sbjct: 179 TAFDGIADKDVVS-WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 351 EKS------KRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
+K+ +++ + + ++ N+++S Y + G ++EA LF + G ++ V+
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM-GSKDLVS 296
Query: 400 WNSMMSGYIHNGQHSEALKLYVTM-RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
WN +++GY N + +A +L+ + + V T + C L G+ +H+++
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 459 SKTPF-QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
+ + + VG AL+ FY++ G + A +F+ + + ++ +W A+++ +A
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 186/394 (47%), Gaps = 39/394 (9%)
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
V++ CA + L +G+ +HG K G + + ++ Y +DD ++++ M
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 302 CLNVANSLIGGL-ILMGRIEEAELIFYGLR---ETNPISYNLMI------------KGYA 345
+ V N ++ GL + GR E F + E P S I G +
Sbjct: 87 PV-VWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 346 MSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGEL-DEAVKLFDKTKGERNSVTWNSMM 404
M S I K+ K+ N ++S+Y+K G + +A FD +++ V+WN+++
Sbjct: 144 MHSYIIKAG------LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI-ADKDVVSWNAII 196
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL---CSFQQGQLLHAH-LSK 460
+G+ N ++A + + M + + + +T + + C S+ + + G+ +H++ + +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILL 520
+ Q +V+V +LV FY + G + +A FT + S ++ +W +I GYA + ++ L
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 521 FRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYT---CVV 576
F +++ +G V P++ T ++IL C+ L G EI HS + R + +E + ++
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI-HSYIL--RHSYLLEDTSVGNALI 373
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
R G A + M + D + W A+L+A
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 17/256 (6%)
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGY-IHNGQHSEALKLYVTMRRLSV 428
+++++Y+K +D+ K+F + + V WN +++G + G+ E ++ + M
Sbjct: 61 SVLNMYAKCRRMDDCQKMF-RQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADE 117
Query: 429 DHSRS-TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHL-ADA 486
S TF+++ C L G+ +H+++ K + + VG ALV Y+K G + DA
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 487 QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHA 546
+F I +V +W A+I G++ + + +++ F ML + PN AT +L C+
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 547 G---LLNDGLEIFHSMQICYRVTPTIEHYTC--VVDLLGRSGRLKEAEEFINQMP----I 597
G +I HS + R + C +V R GR++EA +M +
Sbjct: 238 DKNIACRSGRQI-HSY-VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 598 EADGVIWGALLNASWF 613
+ VI G N WF
Sbjct: 296 SWNVVIAGYASNCEWF 311
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 220/430 (51%), Gaps = 39/430 (9%)
Query: 298 GGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLF 357
G + + N LI + + +A +F + + N IS+ MI Y+ +K+ L
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 358 EKMAPKN-----------LTSLNTM-------------------------ISVYSKNGEL 381
M N L S N M I V++K GE
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
++A+ +FD+ +++ WNS++ G+ N + AL+L+ M+R ++T + + RA
Sbjct: 211 EDALSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAW 501
CT L + G H H+ K + ++ + ALVD Y KCG L DA R F + +V W
Sbjct: 270 CTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITW 327
Query: 502 TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI 561
+ +I+G A +G E++ LF M G PN T V +L ACSHAGLL DG F SM+
Sbjct: 328 STMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 562 CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGE 621
Y + P EHY C++DLLG++G+L +A + +N+M E D V W LL A +++ + E
Sbjct: 388 LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE 447
Query: 622 RAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNI 681
AA+K+ +LDP + +LSN+YA +W IR R++ ++K+PGCSWIE+N I
Sbjct: 448 YAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQI 507
Query: 682 HMFSVEDKTH 691
H F + D +H
Sbjct: 508 HAFIIGDNSH 517
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 175/385 (45%), Gaps = 51/385 (13%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
H P + N+ I K L +A +FD+MP R V SW TMIS YS+ + +AL L
Sbjct: 92 HRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
M R V+ N ++S+VL SC + + +H ++K G E V SAL+ +
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
+A VF+E+ G+ ++W+ ++ G+ Q
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNS----------------------------- 239
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
R D AL+LF+ M+R+ + + TL V+R C L L G H +K D D
Sbjct: 240 RSD---VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET 332
+ AL + YC +++DA RV+ M E + +++I GL G +EA +F ++ +
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQM-KERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 333 NPISYNLMIKGYAMSSQ----IEKSKRLFEKMAPKNLTSLNT-------MISVYSKNGEL 381
+ I G + +E F M K L ++ MI + K G+L
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSM--KKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSG 406
D+AVKL ++ + E ++VTW +++
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 176/419 (42%), Gaps = 65/419 (15%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
++S ++ C + ++ G + L +G + + L+ V+ + +A +F+++
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
N + W+ M+S Y + + ++AL+L
Sbjct: 123 PQRNVISWTTMISAYSKCKIH--------------------------------QKALELL 150
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
M R V PN +T V+R C + + +++H IK+GL+ D + AL + +
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 285 DAIDDAKRVYESM-GGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN----- 338
+DA V++ M G+A V NS+IGG R + A +F ++ I+
Sbjct: 208 GEPEDALSVFDEMVTGDAI--VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 339 -------LMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKT 391
L + M + + K ++L N ++ +Y K G L++A+++F++
Sbjct: 266 VLRACTGLALLELGMQAHVHIVK------YDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
K ER+ +TW++M+SG NG EALKL+ M+ + T + AC+ + G
Sbjct: 320 K-ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 452 QLLHAHLSK----TPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALI 505
+ K P + + ++D K G L DA + + P+ W L+
Sbjct: 379 WYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 264/513 (51%), Gaps = 41/513 (7%)
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
++F+ +++ +++ AL G +HG+ K D + + Y I+ A+ V+
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 295 ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS------------------ 336
+ M + N++I G ++EA +F ++++N +
Sbjct: 170 DEMSHRDVV-TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 337 ------YNLMIKG---------------YAMSSQIEKSKRLFEKMAPKNLTSLNTMISVY 375
Y +I+ YA + ++ ++ F KM+ +NL M+S Y
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 376 SKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTF 435
SK G LD+A +FD+T+ +++ V W +M+S Y+ + EAL+++ M + +
Sbjct: 289 SKCGRLDDAQVIFDQTE-KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 436 SVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS 495
+ AC +L + + +H+ + ++ + + AL++ Y+KCG L + F +
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
NV +W+++IN + HG S+++ LF M + V PN TFV +L CSH+GL+ +G +I
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 556 FHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWK 615
F SM Y +TP +EHY C+VDL GR+ L+EA E I MP+ ++ VIWG+L++A
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 616 DIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWI 675
++E+G+ AA+++ L+P+ V++SN+YA RW IR+ ++ + K+ G S I
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Query: 676 ELNNNIHMFSVEDKTHAYSDVIYATVDHLTATI 708
+ N H F + DK H S+ IYA +D + + +
Sbjct: 588 DQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKL 620
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 181/369 (49%), Gaps = 13/369 (3%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A G + AR++FDEM R V +WNTMI Y ++G DEA L M S V +E+
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++S+C R+G++ + ++ L+++ + +AL+ + A F ++
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N + + M+SGY + + +A +F + +D+V WTT+IS Y D + AL +F M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV-ESDYPQEALRVFEEM 335
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
S + P+ ++ VI CA LG L K VH +GL+ + SI AL Y +
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKG 343
D + V+E M ++ + S+I L + G +A +F ++ E N +++ ++ G
Sbjct: 396 DATRDVFEKMPRRNVVSWS-SMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 344 YAMSSQIEKSKRLFEKM------APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
+ S +E+ K++F M PK L M+ ++ + L EA+++ + N
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPK-LEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 398 VTWNSMMSG 406
V W S+MS
Sbjct: 514 VIWGSLMSA 522
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 192/454 (42%), Gaps = 75/454 (16%)
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+L++ SF +L + ++ +LF G ++H + K V + + C I A
Sbjct: 108 RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARN 167
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
VF+E M RDVV W T+I Y R +
Sbjct: 168 VFDE-------------------------------MSHRDVVTWNTMIERYCRF-GLVDE 195
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
A LF M+ S V+P+E L ++ C R G + + ++ I++ + D + AL
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNL 339
Y +D A+ + M L V+ +++ G GR+++A++IF + + + +
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRN-LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 340 MIKGYAMSSQIEKSKRLFEKM-----------------APKNLTSL-------------- 368
MI Y S +++ R+FE+M A NL L
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 369 --------NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
N +I++Y+K G LD +F+K RN V+W+SM++ +G+ S+AL L+
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLF 433
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS-KTPFQANVYVGTALVDFYSK 479
M++ +V+ + TF + C+ ++G+ + A ++ + + +VD + +
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 480 CGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
L +A S+ + NV W +L++ HG
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 1/214 (0%)
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
A+ +F S+ +N + + + + Y +R + + +F + +A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA 503
+ + +G LH K + +V T +D Y+ CG + A+ F + +V W
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
+I Y GL E+ LF M V+P+ I+SAC G + I+ + I
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL-IEN 241
Query: 564 RVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPI 597
V T +V + +G + A EF +M +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 31/171 (18%)
Query: 40 TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV 99
N I AK G L R +F++MP R V SW++MI+ S G +AL+L + M + V
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+ NE++F VL C+ SG + GK++ + S +++ + Y C
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFA----SMTDEYNITPKLEHYGC----------- 486
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV-RDVVAWTTLISG 209
M+ + + +++ A+++ MPV +VV W +L+S
Sbjct: 487 ---------------MVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 256/502 (50%), Gaps = 40/502 (7%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A LF ++P DV ++ G A+ E+ + L+ M + V P+ +T V++ C+
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKP-EKTVSLYTEMEKRGVSPDRYTFTFVLKACS 123
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
+L G HG ++ G + + AL F+ + C
Sbjct: 124 KLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHAN------------------C----- 160
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS 367
G + A +F + + ++++ M GYA +I+++ RLF++M K+ +
Sbjct: 161 ---------GDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVA 211
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
N MI+ K E+D A +LFD+ E++ VTWN+M+SGY++ G EAL ++ MR
Sbjct: 212 WNVMITGCLKCKEMDSARELFDRFT-EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP-FQANVYVGT----ALVDFYSKCGH 482
T L AC L + G+ LH ++ +T +++YVGT AL+D Y+KCG
Sbjct: 271 EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGS 330
Query: 483 LADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+ A F + +++ W LI G A H SI +F M V PN TF+ ++ A
Sbjct: 331 IDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILA 389
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGV 602
CSH+G +++G + F M+ Y + P I+HY C+VD+LGR+G+L+EA F+ M IE + +
Sbjct: 390 CSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAI 449
Query: 603 IWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQ 662
+W LL A + ++E+G+ A EKL S+ + +V+LSN+YA G+W +RK
Sbjct: 450 VWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFD 509
Query: 663 SLELRKDPGCSWIELNNNIHMF 684
++K G S IE +++ M
Sbjct: 510 DTRVKKPTGVSLIEEDDDKLMM 531
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 183/415 (44%), Gaps = 52/415 (12%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V+ I A + G L A +FDE+P VS N ++ G +Q + ++ ++L + M +
Sbjct: 46 VVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEK 105
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
V + +F+ VL +C++ G H +++ GF V +AL+ F C +G
Sbjct: 106 RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGI 165
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRD----------------- 199
A +F++ + V WS M SGY +R + AM LF +MP +D
Sbjct: 166 ASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEM 225
Query: 200 --------------VVAWTTLISGYARREDGC---ERALDLFRCMRRSEVLPNEFTLDCV 242
VV W +ISGY C + AL +F+ MR + P+ T+ +
Sbjct: 226 DSARELFDRFTEKDVVTWNAMISGYV----NCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 243 IRICARLGALHAGKVVH-----GLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM 297
+ CA LG L GK +H + + I AL + Y +ID A V+ +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 298 GGEACLNVANSLIGGLILM---GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSK 354
+ L+ N+LI GL L G IE E + N +++ +I + S ++++ +
Sbjct: 342 -KDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 355 RLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+ F M N+ M+ + + G+L+EA + K E N++ W +++
Sbjct: 401 KYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 43/360 (11%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISG 77
E RLF D P+ V + N+ I K E+ AR +FD + V +WN MISG
Sbjct: 196 EAMRLF-----DEMPYKDQV-AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
Y G EAL + M + + ++ ++LS+CA G L GK++H +L++
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS--- 306
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
V S++ +G +W+ ++ Y + + A+++F +
Sbjct: 307 --VSSSIY--------VGTP-------------IWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
RD+ W TLI G A E ++++F M+R +V PNE T VI C+ G + G+
Sbjct: 344 RDLSTWNTLIVGLALHH--AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK 401
Query: 258 VHGLCIKDGLDFDNSIG--GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLIL 315
L ++D + + +I G + + +++A ESM E V +L+G +
Sbjct: 402 YFSL-MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKI 460
Query: 316 MGRIE---EAELIFYGLRETNPISYNLMIKGYAMSSQ---IEKSKRLFEKMAPKNLTSLN 369
G +E A +R+ Y L+ YA + Q ++K +++F+ K T ++
Sbjct: 461 YGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 15/264 (5%)
Query: 364 NLTSLNTMI--SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
NL+ + +I + S G L A KLFD+ S+ N ++ G + + + + LY
Sbjct: 43 NLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSIC-NHVLRGSAQSMKPEKTVSLYT 101
Query: 422 TMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
M + V R TF+ + +AC+ L G H + + F N YV AL+ F++ CG
Sbjct: 102 EMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG 161
Query: 482 HLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
L A F + AW+++ +GYA G E++ LF M + + + +++
Sbjct: 162 DLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMIT 217
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPI---E 598
C ++ E+F VT + ++ G KEA +M
Sbjct: 218 GCLKCKEMDSARELFDRFTEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 599 ADGVIWGALLNASWFWKDIEVGER 622
D V +LL+A D+E G+R
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKR 296
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 207/341 (60%), Gaps = 7/341 (2%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
++++ +Y +GE++ A K+F++ ERN V+W +M+SG+ + LKLY MR+ +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMP-ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS 217
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
D + TF+ L ACT + QG+ +H ++ +++ +L+ Y KCG L DA R
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ-GVLPNAATFVAILSACSHAG 547
F + +V +W ++I GYA HGL ++I LF M+ + G P+A T++ +LS+C HAG
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
L+ +G + F+ M + + P + HY+C+VDLLGR G L+EA E I MP++ + VIWG+L
Sbjct: 338 LVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
L + D+ G RAAE+ L+P+ + V L+N+YA +G W + T+RK ++ L+
Sbjct: 397 LFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLK 456
Query: 668 KDPGCSWIELNNNIHMFSVEDKTHA----YSDVIYATVDHL 704
+PGCSWIE+NN + MF ED ++ V++ +DH+
Sbjct: 457 TNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 50 TGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAV 109
+GE+ A +F+EMP R V SW MISG++Q R D L L S M +S N+ +F+A+
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
LS+C SG+L G+ VH L G + + + ++L+ +C + +A +F++ + +
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVR-----DVVAWTTLISGYARREDGCERALDLF 224
V W+ M++GY Q + A++LF M + D + + ++S R + F
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS-CRHAGLVKEGRKFF 346
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALH 253
M + P C++ + R G L
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 46/325 (14%)
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
+S + R + S+ + SC + G H L LK GF +GS+L+
Sbjct: 108 SSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVL--- 164
Query: 151 CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY 210
RD SG V+ NA +F +MP R+VV+WT +ISG+
Sbjct: 165 -------------YRD----------SGEVE-----NAYKVFEEMPERNVVSWTAMISGF 196
Query: 211 AR--REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
A+ R D C L L+ MR+S PN++T ++ C GAL G+ VH + GL
Sbjct: 197 AQEWRVDIC---LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGL----ILMGRIEEAEL 324
I +L YC + DA R+++ + ++ NS+I G + M IE EL
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS-WNSMIAGYAQHGLAMQAIELFEL 312
Query: 325 IF-YGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLNTMISVYSKNG 379
+ + + I+Y ++ + +++ ++ F MA L + ++ + + G
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMM 404
L EA++L + + NSV W S++
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLL 397
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
S R+C F+ G H K F ++VY+G++LV Y G + +A + F +
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLE 554
NV +WTA+I+G+A + L+ M PN TF A+LSAC+ +G L G
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 555 IFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ H + + + ++ + + G LK+A +Q D V W +++
Sbjct: 243 V-HCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMI 294
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 29/161 (18%)
Query: 40 TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH-RSC 98
+N I+ K G+L +A +FD+ + V SWN+MI+GY+Q G +A+ L M +S
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 99 VKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE--------------KFGLVGSAL 144
K + I++ VLSSC +G + G++ +L+ + G + +FGL+ AL
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 145 LYFCVRCCGIGEAELVFEELRDGNHVLW-SLMLSGYVQRDM 184
EL+ N V+W SL+ S V D+
Sbjct: 379 -------------ELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 221/382 (57%), Gaps = 2/382 (0%)
Query: 328 GLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL 387
GL + + +I Y+ + +K++ +F+ M KN + NTMI Y ++G++D A K+
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
FDK ER+ ++W +M++G++ G EAL + M+ V ACT+L +
Sbjct: 163 FDKMP-ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
G +H ++ F+ NV V +L+D Y +CG + A++ F ++ V +W ++I G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
+A +G ES++ FR M +G P+A TF L+ACSH GL+ +GL F M+ YR++P
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA-SWFWKDIEVGERAAEK 626
IEHY C+VDL R+GRL++A + + MP++ + V+ G+LL A S +I + ER +
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKH 401
Query: 627 LFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSV 686
L L+ S +VILSNMYA G+W + +R++++ L L+K PG S IE+++ +H+F
Sbjct: 402 LTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMA 461
Query: 687 EDKTHAYSDVIYATVDHLTATI 708
D H + I ++ +++ +
Sbjct: 462 GDNAHVETTYIREVLELISSDL 483
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 181/360 (50%), Gaps = 16/360 (4%)
Query: 67 TVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCA--RSGSLFLGKQ 124
T SW + I+ ++ GR EA S M + V+ N I+F A+LS C SGS LG
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 125 VHSLLLKSGFEK-FGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
+H K G ++ +VG+A++ + +A LVF+ + D N V W+ M+ GY++
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
+ NA +F KMP RD+++WT +I+G+ ++ E AL FR M+ S V P+ + +
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ-EEALLWFREMQISGVKPDYVAIIAAL 213
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
C LGAL G VH + + + +L + YC ++ A++V+ +M +
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 304 NVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFE- 358
+ NS+I G G E+ + F ++E + +++ + + +E+ R F+
Sbjct: 274 S-WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 359 -----KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQH 413
+++P+ + ++ +YS+ G L++A+KL + N V S+++ ++G +
Sbjct: 333 MKCDYRISPR-IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 155/383 (40%), Gaps = 57/383 (14%)
Query: 16 RVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMI 75
R +K RL + D ++ N I ++G++ A MFD+MP R + SW MI
Sbjct: 124 RFKKARLVFDYMEDKNS-----VTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 76 SGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE 135
+G+ + G +EAL M S VK + ++ A L++C G+L G VH +L F+
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 136 KFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
V ++L+ RC G E A +F M
Sbjct: 239 NNVRVSNSLIDLYCRC---GCVEF----------------------------ARQVFYNM 267
Query: 196 PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
R VV+W ++I G+A + E +L FR M+ P+ T + C+ H G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHE-SLVYFRKMQEKGFKPDAVTFTGALTACS-----HVG 321
Query: 256 KVVHGLCIKDGLDFDNSIG------GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
V GL + D I G L + Y ++DA ++ +SM + V SL
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 310 IGGLILMG-RIEEAELIFYGLRETNPIS---YNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
+ G I AE + L + N S Y ++ YA + E + ++ KM L
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 366 TSLNTMISVYSKNGELDEAVKLF 388
S+ E+D+ + +F
Sbjct: 442 KKQPGFSSI-----EIDDCMHVF 459
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ--GQLL 454
+V+W S ++ NG+ +EA K + M V+ + TF L C S + G LL
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 455 HAHLSKTPFQAN-VYVGTALVDFYSK-------------------------------CGH 482
H + K N V VGTA++ YSK G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 483 LADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+ +A + F + ++ +WTA+ING+ G E++L FR M + GV P+ +A L+A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
C++ G L+ GL + H + + ++DL R G ++ A + M
Sbjct: 216 CTNLGALSFGLWV-HRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 198/646 (30%), Positives = 304/646 (47%), Gaps = 110/646 (17%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V + ++ K ++ +A + DEMP R ++S N +SG + G +A +
Sbjct: 66 VFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARV 125
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
S +N ++ ++VL C G + G Q+H L +KSGFE VG++L+ RC GE
Sbjct: 126 SGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC---GE 179
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
W L A +F K+P + VV + ISG E+G
Sbjct: 180 ---------------WVL-------------AARMFEKVPHKSVVTYNAFISGLM--ENG 209
Query: 217 CERAL-DLFRCMRR-SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
+ +F MR+ S PN+ T I CA L L G+ +HGL +K F
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF----- 264
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRI-EEAELIFYGLRETN 333
E+M G A +++ + R + A ++F L++T
Sbjct: 265 --------------------ETMVGTALIDMYSKC--------RCWKSAYIVFTELKDT- 295
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
+NL S N++IS NG+ + AV+LF+K
Sbjct: 296 -----------------------------RNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 394 E---RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
E +S TWNS++SG+ G+ EA K + M + + S + L AC+ + + +
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKN 386
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP---NVAAWTALING 507
G+ +H H+ K + +++V T+L+D Y KCG + A+R F F P + W +I+G
Sbjct: 387 GKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR-FEPKPKDPVFWNVMISG 445
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
Y HG +I +F + + V P+ ATF A+LSACSH G + G +IF MQ Y P
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL 627
+ EH C++DLLGRSGRL+EA+E I+QM + V +LL + D +GE AA KL
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKL 564
Query: 628 FSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
L+P + FVILS++YA L RW +IR+ + +L K PG S
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 181/369 (49%), Gaps = 18/369 (4%)
Query: 234 PNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRV 293
PN+FT +++ CA+LG + G+++H +K G D AL Y + DA +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 294 YESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQ 349
+ M +V N+ + GL+ G +A +F R + N ++ ++ G
Sbjct: 89 LDEMPERGIASV-NAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGD 144
Query: 350 IEKSKRLFEKMAPKNLTSL-----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
IE +L +A K+ + +++S+YS+ GE A ++F+K ++ VT+N+ +
Sbjct: 145 IEGGMQL-HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFI 202
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRS-TFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
SG + NG + ++ MR+ S + TF AC SL + Q G+ LH + K F
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 464 QANVYVGTALVDFYSKCGHLADAQRSFTSIF-SPNVAAWTALINGYAYHGLGSESILLFR 522
Q VGTAL+D YSKC A FT + + N+ +W ++I+G +G ++ LF
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 523 SMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRS 582
+ +G+ P++AT+ +++S S G + + + F M + + P+++ T ++
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKCLTSLLSACSDI 381
Query: 583 GRLKEAEEF 591
LK +E
Sbjct: 382 WTLKNGKEI 390
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
LS ++ TF L ++C L QG++LHA + KT F +V+ TALV Y K + D
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 486 AQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
A + + +A+ A ++G +G ++ +F V G N+ T ++L C
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC-- 142
Query: 546 AGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
G + G+++ H + + + T +V + R G A ++P
Sbjct: 143 -GDIEGGMQL-HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/668 (28%), Positives = 316/668 (47%), Gaps = 87/668 (13%)
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMM 185
H +KSG + + L+ + + EA VF+E+ + N W+ +++ YV+ + +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 186 GNAMDLFGKMPV-RDVVAWTTLISGYARREDGCE-RALDLFRCMRRSE---VLPNEFTLD 240
A +LF RD++ + TL+SG+A+ DGCE A+++F M R E + ++FT+
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKT-DGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 241 CVIRICARLGALHAGKVVHGLCIK---DGLDFD------------------NSIGGALAE 279
++++ A+L + G+ +HG+ +K DG F N G+ E
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 280 F------------YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY 327
F YC ID A V+ N+LI G G EEA +
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 328 GLRET-------------NPISYNLMIK-GYAMSSQIEKSKRLFEKMAPK---------- 363
+ E N +S +K G + +++ K+ K
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 364 ---------------NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
NL S ++MI YS G++ EA +LFD + E+N V W +M GY+
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFD-SLSEKNLVVWTAMFLGYL 368
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ----GQLLHAHLSKTPFQ 464
+ Q L+L R + + + S++ + CS Q G+ +H H +T
Sbjct: 369 NLRQPDSVLEL---ARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 465 ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM 524
+ + TA VD YSKCG++ A+R F S F + + A+I G A+HG ++S F M
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM 485
Query: 525 LVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGR 584
G P+ TF+A+LSAC H GL+ +G + F SM Y ++P HYTC++DL G++ R
Sbjct: 486 TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYR 545
Query: 585 LKEAEEFINQM-PIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSN 643
L +A E + + +E D VI GA LNA + K+ E+ + EKL ++ + S ++ ++N
Sbjct: 546 LDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIAN 605
Query: 644 MYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDH 703
YA GRW + IR +++ EL GCSW ++ HMF+ D +H ++ IYA +
Sbjct: 606 AYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHF 665
Query: 704 LTATINSI 711
+T ++ I
Sbjct: 666 VTKDLSEI 673
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 135/609 (22%), Positives = 261/609 (42%), Gaps = 94/609 (15%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQW---------------- 81
+S+N + +K+G L EAR++FDEM R V SWN +I+ Y ++
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 82 -----------------GRYDEALALASFMHR---SCVKLNEISFSAVLSSCARSGSLFL 121
G EA+ + MHR + +++ + + ++ A+ ++F
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE----ELRDGNHVLWSLMLS 177
G+Q+H +L+K+G + S+L++ +C E +F E D V + M++
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS--VARNAMIA 201
Query: 178 GYVQRDMMGNAMDLFGKMP-VRDVVAWTTLISGYARREDGC-ERALDLFRCMRRSEVLPN 235
Y + + A+ +F + P + D ++W TLI+GYA ++G E AL + M + + +
Sbjct: 202 AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYA--QNGYEEEALKMAVSMEENGLKWD 259
Query: 236 EFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE 295
E + V+ + + L +L GK VH +K+G + + + + YC + A+ +
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH- 318
Query: 296 SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQ---IEK 352
+ G L A+S+I G G++ EA+ +F L E N + + M GY Q + +
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE 378
Query: 353 SKRLF---EKMAPKNLTSLNTM----------------------------------ISVY 375
R F E P +L ++ + + +Y
Sbjct: 379 LARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMY 438
Query: 376 SKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTF 435
SK G ++ A ++FD + ER++V +N+M++G H+G +++ + + M TF
Sbjct: 439 SKCGNVEYAERIFD-SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITF 497
Query: 436 SVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG--TALVDFYSKCGHLADAQRSFTSI 493
L AC +G+ + + + + G T ++D Y K L A I
Sbjct: 498 MALLSACRHRGLVLEGEKYFKSMIE-AYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI 556
Query: 494 --FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
+ A +N +++ +E + L+ N + ++ I +A + +G ++
Sbjct: 557 DQVEKDAVILGAFLNACSWNK-NTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDE 615
Query: 552 GLEIFHSMQ 560
I H M+
Sbjct: 616 MQRIRHQMR 624
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 177/384 (46%), Gaps = 17/384 (4%)
Query: 19 KFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMP-LRTVSSWNTMISG 77
KF+ + S ++ N IA + G++ +A +F P L SWNT+I+G
Sbjct: 175 KFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAG 234
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
Y+Q G +EAL +A M + +K +E SF AVL+ + SL +GK+VH+ +LK+G
Sbjct: 235 YAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSN 294
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
V S ++ +C + AE GN S M+ GY + M A LF +
Sbjct: 295 KFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE 354
Query: 198 RDVVAWTTLISGY--ARREDGCERALDLFRCMRRSEV-LPNEFTLDCVIRICARLGALHA 254
+++V WT + GY R+ D L+L R +E P+ + V+ C+ +
Sbjct: 355 KNLVVWTAMFLGYLNLRQPDS---VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEP 411
Query: 255 GKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLI 314
GK +HG ++ G+ D + A + Y ++ A+R+++S E + N++I G
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCA 470
Query: 315 LMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT 370
G ++ F + E + I++ ++ + + ++ F+ M S T
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET 530
Query: 371 -----MISVYSKNGELDEAVKLFD 389
MI +Y K LD+A++L +
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELME 554
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 247 bits (630), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 183/680 (26%), Positives = 326/680 (47%), Gaps = 63/680 (9%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+K G+ EA +F + SW MIS ++ EAL S M ++ V NE +F
Sbjct: 170 SKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFV 229
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+L + + G L GK +HS ++ G
Sbjct: 230 KLLGASSFLG-LEFGKTIHSNIIVRGIPL------------------------------- 257
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N VL + ++ Y Q M +A+ + +DV WT+++SG+ R E A+ F M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE-AVGTFLEM 316
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
R + PN FT ++ +C+ + +L GK +H IK G + +G AL + Y A
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 288 D-DAKRVYESMGGEACLNVAN--SLIGGLILMGRIEEAELIFYGL------RETNP--IS 336
+ +A RV+ +M NV + +LI GL+ G +++ +GL RE P ++
Sbjct: 377 EVEASRVFGAM---VSPNVVSWTTLILGLVDHGFVQDC----FGLLMEMVKREVEPNVVT 429
Query: 337 YNLMIKGYAMSSQIEKSKRLFE-------KMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
+ +++ S++ +R+ E + + N+++ Y+ + ++D A +
Sbjct: 430 LSGVLRA---CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIR 486
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
K R+++T+ S+++ + G+H AL + M + + + A +L + +
Sbjct: 487 SMK-RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
G+ LH + K+ F V +LVD YSKCG L DA++ F I +P+V +W L++G A
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 510 YHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI 569
+G S ++ F M ++ P++ TF+ +LSACS+ L + GLE F M+ Y + P +
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQV 665
Query: 570 EHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
EHY +V +LGR+GRL+EA + M ++ + +I+ LL A + ++ +GE A K +
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLA 725
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK 689
L P+ + +++L+++Y G+ R + L K G S +E+ +H F ED
Sbjct: 726 LAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDV 785
Query: 690 THA-YSDVIYATVDHLTATI 708
T ++ IYA ++ + I
Sbjct: 786 TRVDKTNGIYAEIESIKEEI 805
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 218/443 (49%), Gaps = 15/443 (3%)
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLP 234
+LS Y++ D + NA LF +M R V AWT +IS + + ++ AL LF M S P
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFAS-ALSLFEEMMASGTHP 122
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
NEFT V+R CA L + G VHG IK G + ++ +G +L++ Y +A ++
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 295 ESMGGEACLNVANSLIGGLILMGRIEEAELIFYG--LRETNPISYNLMIKGYAMSS--QI 350
S+ ++ +I L+ + EA L FY ++ P + +K SS +
Sbjct: 183 SSLQNADTIS-WTMMISSLVGARKWREA-LQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 351 EKSKRLFEKM----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
E K + + P N+ +++ YS+ ++++AV++ + + GE++ W S++SG
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN-SSGEQDVFLWTSVVSG 299
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
++ N + EA+ ++ MR L + + T+S + C+++ S G+ +H+ K F+ +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 467 VYVGTALVDFYSKC-GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSML 525
VG ALVD Y KC +A R F ++ SPNV +WT LI G HG + L M+
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
+ V PN T +L ACS + LEI H+ + V + +VD S ++
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEI-HAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 586 KEAEEFINQMPIEADGVIWGALL 608
A I M D + + +L+
Sbjct: 479 DYAWNVIRSMK-RRDNITYTSLV 500
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 150/611 (24%), Positives = 272/611 (44%), Gaps = 60/611 (9%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
KT + AR +FDEM RTV +W MIS +++ + AL+L M S NE +FS+
Sbjct: 70 KTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSS 129
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
V+ SCA + G +VH ++K+GFE +VGS+L +C EA
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEA----------- 178
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY--ARREDGCERALDLFRC 226
+LF + D ++WT +IS AR+ AL +
Sbjct: 179 --------------------CELFSSLQNADTISWTMMISSLVGARK---WREALQFYSE 215
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M ++ V PNEFT ++ + LG L GK +H I G+ + + +L +FY
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIK 342
++DA RV S GE + + S++ G + R +EA F +R + N +Y+ ++
Sbjct: 275 MEDAVRVLNS-SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 343 GYAMSSQIEKSKRLFE---KMAPKNLTSL-NTMISVYSKNGELD-EAVKLFDKTKGERNS 397
+ ++ K++ K+ ++ T + N ++ +Y K + EA ++F N
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP-NV 392
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
V+W +++ G + +G + L + M + V+ + T S + RAC+ L ++ +HA+
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
L + + VG +LVD Y+ + A S+ + +T+L+ + G +
Sbjct: 453 LLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA 512
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV-- 575
+ + M G+ + + +SA ++ G L G + CY V V
Sbjct: 513 LSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH-----CYSVKSGFSGAASVLN 567
Query: 576 --VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAE--KLFSLD 631
VD+ + G L++A++ ++ D V W L++ I A E ++ +
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 632 PNPISGFVILS 642
P+ ++ ++LS
Sbjct: 627 PDSVTFLILLS 637
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 10/284 (3%)
Query: 363 KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
+NL N ++S+Y K + A KLFD+ R W M+S + + + + AL L+
Sbjct: 56 ENLDLCNNLLSLYLKTDGIWNARKLFDEM-SHRTVFAWTVMISAFTKSQEFASALSLFEE 114
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
M + TFS + R+C L G +H + KT F+ N VG++L D YSKCG
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 483 LADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+A F+S+ + + +WT +I+ E++ + M+ GV PN TFV +L A
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGV 602
S GL + + HS I + + T +VD + ++++A +N E D
Sbjct: 235 SSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVF 291
Query: 603 IWGALLNASWFWKDIEVGERAAEKL----FSLDPNPISGFVILS 642
+W +++ S F +++ E L L PN + ILS
Sbjct: 292 LWTSVV--SGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 246 bits (629), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 253/518 (48%), Gaps = 37/518 (7%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A+ +M +V + L G+ R+L+L+ M R V P+ +T +++ A
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPI-RSLELYVRMLRDSVSPSSYTYSSLVK--A 880
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
A G+ + K G F I L +FY
Sbjct: 881 SSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYS------------------------- 915
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS 367
GRI EA +F + E + I++ M+ Y ++ + L +M+ KN +
Sbjct: 916 -------ATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEAT 968
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
N +I+ Y G L++A LF++ ++ ++W +M+ GY N ++ EA+ ++ M
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMP-VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+ T S + AC L + G+ +H + + F +VY+G+ALVD YSKCG L A
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
F ++ N+ W ++I G A HG E++ +F M ++ V PNA TFV++ +AC+HAG
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
L+++G I+ SM Y + +EHY +V L ++G + EA E I M E + VIWGAL
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
L+ K++ + E A KL L+P + +L +MYA RW IR R++ L +
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
Query: 668 KD-PGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
K PG S I ++ H+F+ DK+H+ SD + +D +
Sbjct: 1268 KICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1305
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 180/385 (46%), Gaps = 44/385 (11%)
Query: 62 EMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFL 121
+M V +N + G+ +L L M R V + ++S+++ A S +
Sbjct: 830 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK--ASSFASRF 887
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
G+ + + + K GF + + L+ F I EA VF+E+ + + + W+ M+S Y +
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 182 -RDM---------------------------MGN---AMDLFGKMPVRDVVAWTTLISGY 210
DM +GN A LF +MPV+D+++WTT+I GY
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
++ + E A+ +F M ++P+E T+ VI CA LG L GK VH +++G D
Sbjct: 1008 SQNKRYRE-AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLD 1066
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
IG AL + Y +++ A V+ ++ + L NS+I GL G +EA +F +
Sbjct: 1067 VYIGSALVDMYSKCGSLERALLVFFNLPKKN-LFCWNSIIEGLAAHGFAQEALKMFAKME 1125
Query: 331 ----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP-----KNLTSLNTMISVYSKNGEL 381
+ N +++ + + +++ +R++ M N+ M+ ++SK G +
Sbjct: 1126 MESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSG 406
EA++L + E N+V W +++ G
Sbjct: 1186 YEALELIGNMEFEPNAVIWGALLDG 1210
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 130/299 (43%), Gaps = 36/299 (12%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G L +A +F++MP++ + SW TMI GYSQ RY EA+A+ M + +E++ S V+
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
S+CA G L +GK+VH L++GF +GSAL+ +C + A LVF L N
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
W+ ++ G G+A + AL +F M
Sbjct: 1100 CWNSIIEGLAAH--------------------------GFA------QEALKMFAKMEME 1127
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN-SIGGALAEFYCDRDAIDD 289
V PN T V C G + G+ ++ I D N G + + I +
Sbjct: 1128 SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 1187
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS---YNLMIKGYA 345
A + +M E + +L+ G + + AE+ F L P++ Y L++ YA
Sbjct: 1188 ALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 1246
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 68/284 (23%)
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
+N I+ + LD AV + + E N +N++ G++ +L+LYV M R S
Sbjct: 808 MNQFITACTSFKRLDLAVSTMTQMQ-EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS 866
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
V S T+S L +A + F G+ L AH+ K F +V + T L+DFYS G + +A+
Sbjct: 867 VSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREAR 924
Query: 488 RSFTSIFSPNVAAWTALINGY-----------------------------AYHGLGS--- 515
+ F + + AWT +++ Y Y GLG+
Sbjct: 925 KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQ 984
Query: 516 ------------------------------ESILLFRSMLVQGVLPNAATFVAILSACSH 545
E+I +F M+ +G++P+ T ++SAC+H
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 546 AGLLNDGLEI-FHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
G+L G E+ +++Q + + I + +VD+ + G L+ A
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGSLERA 1086
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+K G L A +F +P + + WN++I G + G EAL + + M VK N ++F
Sbjct: 1078 SKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Query: 108 AVLSSCARSGSLFLGKQVHSLLLK-----SGFEKFGLVGSALLYFCVRCCGIGEA-ELVF 161
+V ++C +G + G++++ ++ S E +G +++ + I EA EL+
Sbjct: 1138 SVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYG----GMVHLFSKAGLIYEALELIG 1193
Query: 162 EELRDGNHVLWSLMLSG 178
+ N V+W +L G
Sbjct: 1194 NMEFEPNAVIWGALLDG 1210
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 220/398 (55%), Gaps = 8/398 (2%)
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYS 376
G++ ++ +GL +P ++ YA + ++++F++M ++L S MI+ Y+
Sbjct: 145 GKLIHTHVLKFGL-GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYA 203
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS--- 433
K G ++ A LFD + ER+ V+WN M+ GY +G ++AL L+ + L+ +
Sbjct: 204 KQGNVEAARALFD-SMCERDIVSWNVMIDGYAQHGFPNDALMLF--QKLLAEGKPKPDEI 260
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T AC+ + + + G+ +H + + + NV V T L+D YSKCG L +A F
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSML-VQGVLPNAATFVAILSACSHAGLLNDG 552
++ AW A+I GYA HG +++ LF M + G+ P TF+ L AC+HAGL+N+G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 553 LEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASW 612
+ IF SM Y + P IEHY C+V LLGR+G+LK A E I M ++AD V+W ++L +
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 613 FWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGC 672
D +G+ AE L L+ +V+LSN+YA +G + +R ++ + K+PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 673 SWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINS 710
S IE+ N +H F D+ H+ S IY + ++ I S
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 538
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 39/266 (14%)
Query: 375 YSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRST 434
Y+ +G++ ++ LF +T + + + + ++ NG +A LYV + ++ + T
Sbjct: 74 YASHGKIRHSLALFHQTI-DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS----- 489
FS L ++C++ + G+L+H H+ K + YV T LVD Y+K G + AQ+
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 490 --------------------------FTSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
F S+ ++ +W +I+GYA HG +++++LF+
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 524 MLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRS 582
+L +G P+ T VA LSACS G L G I H R+ ++ T ++D+ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWI-HVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 583 GRLKEAEEFINQMPIEADGVIWGALL 608
G L+EA N P D V W A++
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMI 332
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 197/451 (43%), Gaps = 49/451 (10%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKT--GELAEARHMFDEMPLRTVSSWNTMI 75
E ++ +LR + HP N+ + HRA G++ + +F + + + I
Sbjct: 44 EVLQIHAAILRHNLLLHPRYPVLNLKL-HRAYASHGKIRHSLALFHQTIDPDLFLFTAAI 102
Query: 76 SGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE 135
+ S G D+A L + S + NE +FS++L SC+ GK +H+ +LK G
Sbjct: 103 NTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLG 158
Query: 136 KFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
V + L+ + + A+ VF+ + + + V + M++ Y ++ + A LF M
Sbjct: 159 IDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218
Query: 196 PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
RD+V+W +I GYA+ + + + + + P+E T+ + C+++GAL G
Sbjct: 219 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278
Query: 256 KVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLIL 315
+ +H + + + L + Y C
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMY------------------SKC------------- 307
Query: 316 MGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM------APKNLTSLN 369
G +EEA L+F + +++N MI GYAM + + RLF +M P ++T +
Sbjct: 308 -GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN--GQHSEALKLYVTMRRLS 427
T+ + + G ++E +++F+ + G+ + G + + G+ + + Y T++ ++
Sbjct: 367 TLQAC-AHAGLVNEGIRIFE-SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMN 424
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
+D +S + +C F G+ + +L
Sbjct: 425 MDADSVLWSSVLGSCKLHGDFVLGKEIAEYL 455
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 211/371 (56%), Gaps = 5/371 (1%)
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
N MI Y I+ ++++F++M +++ S +I+ Y++ G ++ A +LF+ ++
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP-TKDM 246
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL--CSFQQGQLLH 455
V W +M++G+ N + EAL+ + M + + T + AC L + +
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
A S +V +G+AL+D YSKCG++ +A F S+ + NV ++++I G A HG
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 516 ESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC 574
E++ LF M+ Q + PN TFV L ACSH+GL++ G ++F SM + V PT +HYTC
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNP 634
+VDLLGR+GRL+EA E I M +E G +WGALL A + E+ E AAE LF L+P+
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 635 ISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW-IELNNNIHMFSVEDKTHAY 693
I +++LSN+YA G WG +RK ++ L+K P SW ++ N +H F + H
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPM 546
Query: 694 SDVIYATVDHL 704
S+ I ++ L
Sbjct: 547 SNKIQDKLEEL 557
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 178/368 (48%), Gaps = 15/368 (4%)
Query: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCAR 115
AR + + + R W +I GY+ G++DEA+A+ M + + +FSA+L +C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 116 SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLM 175
L LG+Q H+ + F VG+ ++ V+C I A VF+E+ + + + W+ +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 176 LSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPN 235
++ Y + M A +LF +P +D+VAWT +++G+A+ E AL+ F M +S + +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQE-ALEYFDRMEKSGIRAD 280
Query: 236 EFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS--IGGALAEFYCDRDAIDDAKRV 293
E T+ I CA+LGA + K G + IG AL + Y +++A V
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 294 YESMGGEACLNVANSLIGGLILMGRIEEA-ELIFYGLRET----NPISYNLMIKGYAMSS 348
+ SM + + S+I GL GR +EA L Y + +T N +++ + + S
Sbjct: 341 FMSMNNKNVFTYS-SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSG 399
Query: 349 QIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
+++ +++F+ M M+ + + G L EA++L E + W ++
Sbjct: 400 LVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGAL 459
Query: 404 MSG-YIHN 410
+ IHN
Sbjct: 460 LGACRIHN 467
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 121/282 (42%), Gaps = 46/282 (16%)
Query: 341 IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
I G+ + +++S + K+ + LT L + Y++ + E V+ RN W
Sbjct: 68 IHGHVLRKGLDQSCYILTKLI-RTLTKLGVPMDPYAR--RVIEPVQF-------RNPFLW 117
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
+++ GY G+ EA+ +Y MR+ + TFS L +AC ++ G+ HA +
Sbjct: 118 TAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR 177
Query: 461 TPFQANVYVGTALVDFYSKC-------------------------------GHLADAQRS 489
VYVG ++D Y KC G++ A
Sbjct: 178 LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG-- 547
F S+ + ++ AWTA++ G+A + E++ F M G+ + T +SAC+ G
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGAS 297
Query: 548 -LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
+ ++I + + Y + + + ++D+ + G ++EA
Sbjct: 298 KYADRAVQI--AQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 144/356 (40%), Gaps = 47/356 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
VIS IA A+ G + A +F+ +P + + +W M++G++Q + EAL M +
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFG--LVGSALLYFCVRCCGI 154
S ++ +E++ + +S+CA+ G+ + + KSG+ ++GSAL+ +C +
Sbjct: 275 SGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNV 334
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
EA VF + + N +S M+ G A+ LF M
Sbjct: 335 EEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM------------------- 375
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
+ ++E+ PN T + C+ H+G V G + D + +
Sbjct: 376 ------------VTQTEIKPNTVTFVGALMACS-----HSGLVDQGRQVFDSMYQTFGVQ 418
Query: 275 GALAEFYCDRDAIDDAKRVYE------SMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
+ C D + R+ E +M E V +L+G + E AE+
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 329 LRETNPI---SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGEL 381
L E P +Y L+ YA + R+ + + K L + V KNG++
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQM 534
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 170/590 (28%), Positives = 281/590 (47%), Gaps = 52/590 (8%)
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
+ +LS SL Q+H L++KS + + S L+ FC C
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTC-------------- 51
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
+ + A +F + V W ++I GY+ + ++AL ++
Sbjct: 52 --------------PETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNP-DKALIFYQ 96
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
M R P+ FT V++ C+ L + G VHG +K G + + + L Y
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 286 AIDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEA-----ELIFYGLRETNPISYN 338
++ RV+E + NV SLI G + R +A E+ G++ I +
Sbjct: 157 EVNYGLRVFEDI---PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVD 213
Query: 339 LMI-----------KGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL 387
L++ K + Q F+ N+ ++I +Y+K G+L A L
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
FD ER V+WNS+++GY NG EAL +++ M L + + TF + RA
Sbjct: 274 FDGMP-ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGC 332
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
Q GQ +HA++SKT F + + ALV+ Y+K G A+++F + + AWT +I G
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 508 YAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVT 566
A HG G+E++ +F+ M +G P+ T++ +L ACSH GL+ +G F M+ + +
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 567 PTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEK 626
PT+EHY C+VD+L R+GR +EAE + MP++ + IWGALLN +++E+ +R
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSM 512
Query: 627 LFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIE 676
+ + +V+LSN+YA GRW IR+ ++S + K G S +E
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 136/585 (23%), Positives = 248/585 (42%), Gaps = 62/585 (10%)
Query: 10 VRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHR-AKTGELAEARHMFDEMPLRTV 68
+ NC VE +L +++ S + +S I +T L+ AR +F+ + +V
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 69 SSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSL 128
WN+MI GYS D+AL M R + +F VL +C+ + G VH
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 129 LLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNA 188
++K+GFE V + LL+ + C + VFE++ N V W ++SG+V + +
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSD- 191
Query: 189 MDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
A++ FR M+ + V NE + ++ C R
Sbjct: 192 -------------------------------AIEAFREMQSNGVKANETIMVDLLVACGR 220
Query: 249 LGALHAGKVVHGLCIKDGLD--FDNSIG------GALAEFYCDRDAIDDAKRVYESMGGE 300
+ GK HG G D F + +G +L + Y + A+ +++ M E
Sbjct: 221 CKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGM-PE 279
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
L NS+I G G EEA +F + + + +S I+ +L + +
Sbjct: 280 RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI 339
Query: 361 AP--------KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
K+ + ++++Y+K G+ + A K F+ + +++++ W ++ G +G
Sbjct: 340 HAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGH 398
Query: 413 HSEALKLYVTMR-RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVG 470
+EAL ++ M+ + + T+ + AC+ + ++GQ A + + V
Sbjct: 399 GNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHY 458
Query: 471 TALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHGLGSESILL---FRSMLV 526
+VD S+ G +A+R ++ PNV W AL+NG H E++ L RSM+
Sbjct: 459 GCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH----ENLELTDRIRSMVA 514
Query: 527 QGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH 571
+ + +V + + + AG D I SM+ RV + H
Sbjct: 515 EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMK-SKRVDKVLGH 558
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 187/705 (26%), Positives = 327/705 (46%), Gaps = 80/705 (11%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS-CV 99
N I+ K G EA +F + TV S+ +ISG+S+ EAL + M ++ V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
+ NE +F A+L++C R LG Q+H L++KSGF V ++L+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLM-------------- 223
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
L D + SG D++ LF ++P RDV +W T++S + E +
Sbjct: 224 ---SLYDKD--------SGSSCDDVL----KLFDEIPQRDVASWNTVVSSLVK-EGKSHK 267
Query: 220 ALDLFRCMRRSEVL-PNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
A DLF M R E + FTL ++ C L G+ +HG I+ GL + S+ AL
Sbjct: 268 AFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALI 327
Query: 279 EFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN 338
FY + + +YE M + + +I + G ++ A IF + E N I+YN
Sbjct: 328 GFYSKFWDMKKVESLYEMMMAQDAVTFTE-MITAYMSFGMVDSAVEIFANVTEKNTITYN 386
Query: 339 LMIKGYAMSSQIEKSKRLFEKMAPKNL--------------------------------- 365
++ G+ + K+ +LF M + +
Sbjct: 387 ALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKF 446
Query: 366 -TSLN-----TMISVYSKNGELDEAVKLFDKTKGERNSV-TWNSMMSGYIHNGQHSEALK 418
T+ N ++ + ++ + +A ++FD+ +S S++ GY NG +A+
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVS 506
Query: 419 LY---VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
L+ + ++L +D + +++ C +L + G +H + K + +++ +G +L+
Sbjct: 507 LFHRTLCEQKLFLD--EVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLIS 564
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
Y+KC DA + F ++ +V +W +LI+ Y G E++ L+ M + + P+ T
Sbjct: 565 MYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIIT 624
Query: 536 FVAILSAC--SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFIN 593
++SA + + L+ ++F SM+ Y + PT EHYT V +LG G L+EAE+ IN
Sbjct: 625 LTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTIN 684
Query: 594 QMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQ 653
MP++ + + ALL++ + V +R A+ + S P S +++ SN+Y+ G W +
Sbjct: 685 SMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHR 744
Query: 654 KTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
IR+ ++ RK P SWI N IH F D +H IY
Sbjct: 745 SEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIY 789
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 223/498 (44%), Gaps = 57/498 (11%)
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERA 220
F +LR+ L + ++S Y++ A+ +F + VV++T LISG++R E
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
FR + V PNE+T ++ C R+ G +HGL +K G + +L
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 281 YCDRD---AIDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAELIFY-------- 327
Y D+D + DD ++++ + +VA N+++ L+ G+ +A +FY
Sbjct: 226 Y-DKDSGSSCDDVLKLFDEIPQR---DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGF 281
Query: 328 ---------------------------------GLRETNPISYNLMIKGYAMSSQIEKSK 354
GL + ++ N +I Y+ ++K +
Sbjct: 282 GVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVN-NALIGFYSKFWDMKKVE 340
Query: 355 RLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
L+E M ++ + MI+ Y G +D AV++F E+N++T+N++M+G+ NG
Sbjct: 341 SLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT-EKNTITYNALMAGFCRNGHGL 399
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
+ALKL+ M + V+ + + + AC + + + +H K N + TAL+
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 475 DFYSKCGHLADAQRSFTSIFS--PNVAAWTALINGYAYHGLGSESILLF-RSMLVQGVLP 531
D ++C +ADA+ F S + A T++I GYA +GL +++ LF R++ Q +
Sbjct: 460 DMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL 519
Query: 532 NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEF 591
+ + IL+ C G G +I H + I ++ + + +A +
Sbjct: 520 DEVSLTLILAVCGTLGFREMGYQI-HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKI 578
Query: 592 INQMPIEADGVIWGALLN 609
N M E D + W +L++
Sbjct: 579 FNTMR-EHDVISWNSLIS 595
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
F L R + + +HA K + +G AL+ Y K G +A F S+
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGL 553
SP V ++TALI+G++ L E++ +F M G V PN TFVAIL+AC + G+
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 554 EI 555
+I
Sbjct: 202 QI 203
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 265/525 (50%), Gaps = 32/525 (6%)
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
L + +L Y + +A LF +MP+R++V W LI G +R+ L C S
Sbjct: 73 LQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYL-S 131
Query: 231 EVLPNEFTLDCV-----IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
+L + +LD V IR+C + AG +H L +K GL+ +L FY
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYA 345
I +A+RV+E++ L + N+L+ +L G I+EA +GL + N Y
Sbjct: 192 LIVEARRVFEAVLDRD-LVLWNALVSSYVLNGMIDEA----FGLLKLMGSDKNRFRGDYF 246
Query: 346 MSS------QIEKSKR----LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
S +IE+ K+ LF+ ++ ++++Y+K+ L +A + F+ + R
Sbjct: 247 TFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFE-SMVVR 305
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
N V+WN+M+ G+ NG+ EA++L+ M ++ TF+ + +C + + + +
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
A ++K + V +L+ YS+ G+L++A F SI P++ +WT++I A HG
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE 425
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
ES+ +F SML Q + P+ TF+ +LSACSH GL+ +GL F M Y++ EHYTC+
Sbjct: 426 ESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCL 484
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
+DLLGR+G + EA + +N MP E A + E + A+KL ++P
Sbjct: 485 IDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKP 544
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELR-----KDPGCSWI 675
+ ILSN Y G W Q +RKR E R K PGCSW+
Sbjct: 545 VNYSILSNAYVSEGHWNQAALLRKR----ERRNCYNPKTPGCSWL 585
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 213/482 (44%), Gaps = 58/482 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS-----CVKLN 102
K E +A +FDEMPLR + +WN +I G Q A F + S V L+
Sbjct: 82 TKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLD 141
Query: 103 EISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
+SF ++ C S ++ G Q+H L++K G E ++L++F +C I EA VFE
Sbjct: 142 HVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFE 201
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALD 222
+ D + VLW+ ++S YV M+ A L M G ++ +
Sbjct: 202 AVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM--------------------GSDK--N 239
Query: 223 LFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC 282
FR + FT ++ C + GK +H + K FD + AL Y
Sbjct: 240 RFR--------GDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 283 DRDAIDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAELIFYGL----RETNPIS 336
+ + DA+ +ESM NV N++I G G EA +F + + + ++
Sbjct: 288 KSNHLSDARECFESM---VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKLFDKTK 392
+ ++ A S I + K++ + K L+ N++IS YS+NG L EA+ F +
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 393 GERNSVTWNSMMSGYIHNGQHSEALKLYVTM-RRLSVDHSRSTFSVLFRACTSLCSFQQG 451
E + V+W S++ +G E+L+++ +M ++L D + TF + AC+ Q+G
Sbjct: 405 -EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPD--KITFLEVLSACSHGGLVQEG 461
Query: 452 QLLHAHLSK-TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS-PNVAAWTALINGYA 509
+++ +A T L+D + G + +A S+ + P+ A A G
Sbjct: 462 LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCN 521
Query: 510 YH 511
H
Sbjct: 522 IH 523
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 203/427 (47%), Gaps = 48/427 (11%)
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
++ A L L K HG +K G+ + L + Y DDA ++++ M +
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 304 NVANSLIGGLIL----------MGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKS 353
N LI G+I +G + ++F + + +S+ +I+ S+ ++
Sbjct: 104 -TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDV-SLDHVSFMGLIRLCTDSTNMKAG 161
Query: 354 KRLFEKMAPKNLTSL----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH 409
+L M + L S +++ Y K G + EA ++F+ +R+ V WN+++S Y+
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL-DRDLVLWNALVSSYVL 220
Query: 410 NGQHSEALKLYVTMRRLSVDHSRS-----TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
NG EA L ++ + D +R TFS L AC +QG+ +HA L K +Q
Sbjct: 221 NGMIDEAFGL---LKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQ 273
Query: 465 ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM 524
++ V TAL++ Y+K HL+DA+ F S+ NV +W A+I G+A +G G E++ LF M
Sbjct: 274 FDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM 333
Query: 525 LVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT-----IEHYTCVVDLL 579
L++ + P+ TF ++LS+C+ I+ Q+ VT + ++
Sbjct: 334 LLENLQPDELTFASVLSSCAKFS------AIWEIKQVQAMVTKKGSADFLSVANSLISSY 387
Query: 580 GRSGRLKEAEEFINQMPIEADGVIW----GALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
R+G L EA + + E D V W GAL + + + +++ E +K L P+ I
Sbjct: 388 SRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQK---LQPDKI 443
Query: 636 SGFVILS 642
+ +LS
Sbjct: 444 TFLEVLS 450
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 141/310 (45%), Gaps = 55/310 (17%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK+ L++AR F+ M +R V SWN MI G++Q G EA+ L M ++ +E++F+
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+VLSSCA+ +++ KQV +++ K G F V ++L+ R + EA L F +R+
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
D+V+WT++I A E +L +F M
Sbjct: 407 -------------------------------DLVSWTSVIGALA-SHGFAEESLQMFESM 434
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL-CIKDGLDFDNSIGGALAEFYCDRDA 286
+ ++ P++ T V+ C+ H G V GL C K +F I + C D
Sbjct: 435 LQ-KLQPDKITFLEVLSACS-----HGGLVQEGLRCFKRMTEF-YKIEAEDEHYTCLIDL 487
Query: 287 ------IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE------TNP 334
ID+A V SM E + + GG + E+ E + +G ++ T P
Sbjct: 488 LGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIH---EKRESMKWGAKKLLEIEPTKP 544
Query: 335 ISYNLMIKGY 344
++Y+++ Y
Sbjct: 545 VNYSILSNAY 554
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 210/379 (55%), Gaps = 6/379 (1%)
Query: 318 RIEEAELIFYGLR-----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMI 372
R+ E L +G+ + +P +I YA ++ ++F + + M+
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSR 432
+ ++ G++ A KLF+ ER+ + WN+M+SGY G+ EAL ++ M+ V +
Sbjct: 182 TACARCGDVVFARKLFEGMP-ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNG 240
Query: 433 STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
+ ACT L + QG+ H+++ + + V + T LVD Y+KCG + A F
Sbjct: 241 VAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG 300
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
+ NV W++ +NG A +G G + + LF M GV PNA TFV++L CS G +++G
Sbjct: 301 MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 553 LEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASW 612
F SM+ + + P +EHY C+VDL R+GRL++A I QMP++ +W +LL+AS
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 613 FWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGC 672
+K++E+G A++K+ L+ +V+LSN+YA W + +R+ ++S +RK PGC
Sbjct: 421 MYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 673 SWIELNNNIHMFSVEDKTH 691
S +E+N +H F V DK+H
Sbjct: 481 SVMEVNGEVHEFFVGDKSH 499
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 218 ERALDLFRCMRRS--EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
E++ D +R + S ++ P+ +T++ +++ C L G VHG+ I+ G D D +
Sbjct: 88 EKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQT 147
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAELIFYGLRETN 333
L Y + +D +V+ S+ C + +++ G + A +F G+ E +
Sbjct: 148 GLISLYAELGCLDSCHKVFNSI---PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERD 204
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKM-----------------APKNLTSLN------- 369
PI++N MI GYA + ++ +F M A L +L+
Sbjct: 205 PIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHS 264
Query: 370 ---------------TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHS 414
T++ +Y+K G++++A+++F + E+N TW+S ++G NG
Sbjct: 265 YIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNGFGE 323
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF--QANVYVGTA 472
+ L+L+ M++ V + TF + R C+ + +GQ H + F + +
Sbjct: 324 KCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYGC 382
Query: 473 LVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALING 507
LVD Y++ G L DA + P+ A W++L++
Sbjct: 383 LVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 39/354 (11%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P + + A+ G++ AR +F+ MP R +WN MISGY+Q G EAL + M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
VK+N ++ +VLS+C + G+L G+ HS + ++ + + + L+ +C +
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
+A VF + + N WS L+G AM+ FG
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGL--------AMNGFG--------------------- 322
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
E+ L+LF M++ V PN T V+R C+ +G + G+ H +++ + +
Sbjct: 323 ---EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLE 378
Query: 275 --GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELI---FYGL 329
G L + Y ++DA + + M + V +SL+ + +E L L
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDE 383
N +Y L+ YA S+ + + + M K + SV NGE+ E
Sbjct: 439 ETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRK-QPGCSVMEVNGEVHE 491
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
G QVH + ++ GF+ V + L+ + VF + + V + M++ +
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
+ A LF MP RD +AW +ISGYA+ + E AL++F M+ V N +
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE-ALNVFHLMQLEGVKVNGVAMIS 245
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
V+ C +LGAL G+ H ++ + + L + Y ++ A V+ M E
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM-EEK 304
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLF 357
+ +S + GL + G E+ +F +++ N +++ +++G ++ +++ +R F
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHF 364
Query: 358 EKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+ M + L ++ +Y++ G L++AV + + + ++ W+S++
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 203/345 (58%), Gaps = 5/345 (1%)
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
+++ YSK G+++ A ++FD+ E++ V WNS++SG+ NG EA++++ MR +
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMP-EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
+TF L AC + G +H ++ NV +GTAL++ YS+CG + A+ F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 491 TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ-GVLPNAATFVAILSACSHAGLL 549
+ NVAAWTA+I+ Y HG G +++ LF M G +PN TFVA+LSAC+HAGL+
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGV---IWGA 606
+G ++ M YR+ P +EH+ C+VD+LGR+G L EA +FI+Q+ +W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 607 LLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLEL 666
+L A ++ ++G A++L +L+P+ V+LSN+YA+ G+ + + IR + L
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Query: 667 RKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
RK G S IE+ N +MFS+ D++H + IY ++ L + I
Sbjct: 447 RKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 121/221 (54%), Gaps = 8/221 (3%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+K G++ AR +FD MP +++ +WN+++SG+ Q G DEA+ + M S + + +F
Sbjct: 153 SKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFV 212
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++LS+CA++G++ LG VH ++ G + +G+AL+ RC +G+A VF+++++
Sbjct: 213 SLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKM-----PVRDVVAWTTLISGYARREDGCERALD 222
N W+ M+S Y A++LF KM P+ + V + ++S A E
Sbjct: 273 NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA-HAGLVEEGRS 331
Query: 223 LFRCMRRS-EVLPNEFTLDCVIRICARLGAL-HAGKVVHGL 261
+++ M +S ++P C++ + R G L A K +H L
Sbjct: 332 VYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL 372
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 121/229 (52%), Gaps = 11/229 (4%)
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSK 479
Y M +V S TF+ + ++C L + + G+ +H H + F + YV ALV FYSK
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
CG + A++ F + ++ AW +L++G+ +GL E+I +F M G P++ATFV++
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 540 LSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEA 599
LSAC+ G ++ G + H I + ++ T +++L R G + +A E ++M E
Sbjct: 215 LSACAQTGAVSLGSWV-HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ET 272
Query: 600 DGVIWGALLNASWFWKDIEVGERAAEKLFSLD------PNPISGFVILS 642
+ W A+++A + G++A E ++ PN ++ +LS
Sbjct: 273 NVAAWTAMISA---YGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 46/359 (12%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS 118
+F +PL +N++I S+ +A M S V + +F++V+ SCA +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 119 LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSG 178
L +GK VH + SGF V +AL+ F +C + A VF+ + + + V W+ ++SG
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
+ Q + A+ +F Y RE G E P+ T
Sbjct: 183 FEQNGLADEAIQVF-----------------YQMRESGFE---------------PDSAT 210
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
++ CA+ GA+ G VH I +GLD + +G AL Y + A+ V++ M
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM- 269
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLRE-----TNPISYNLMIKGYAMSSQIEKS 353
E + ++I G ++A +F + + N +++ ++ A + +E+
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 354 KRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKL---FDKTKGERNSVTWNSMM 404
+ ++++M + M+ + + G LDEA K D T W +M+
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 225/395 (56%), Gaps = 2/395 (0%)
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYS 376
GR +I GL + + I N M+ Y + ++ R+F M ++ + N+MI ++
Sbjct: 145 GRQLHGMVIKEGLEDDSFIR-NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
K G +D+A LFD+ +RN V+WNSM+SG++ NG+ +AL ++ M+ V T
Sbjct: 204 KCGLIDQAQNLFDEMP-QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
L AC L + +QG+ +H ++ + F+ N V TAL+D Y KCG + + F
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
++ W ++I G A +G ++ LF + G+ P++ +F+ +L+AC+H+G ++ E F
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKD 616
M+ Y + P+I+HYT +V++LG +G L+EAE I MP+E D VIW +LL+A +
Sbjct: 383 RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGN 442
Query: 617 IEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIE 676
+E+ +RAA+ L LDP+ G+V+LSN YA G + + R ++ ++ K+ GCS IE
Sbjct: 443 VEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
Query: 677 LNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
++ +H F TH S IY+ +D L +++I
Sbjct: 503 VDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTI 537
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 205/419 (48%), Gaps = 18/419 (4%)
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSC----VKLNEISFSAVLSSCARSGSLFLGKQVH 126
WNT+I G+S+ + E +A++ F+ C VK +++ +V + R G G+Q+H
Sbjct: 92 WNTIIRGFSR-SSFPE-MAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 127 SLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMG 186
+++K G E + + +L+ V C + EA +F + + V W+ M+ G+ + ++
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 187 NAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRIC 246
A +LF +MP R+ V+W ++ISG+ R + ALD+FR M+ +V P+ FT+ ++ C
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRN-GRFKDALDMFREMQEKDVKPDGFTMVSLLNAC 268
Query: 247 ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA 306
A LGA G+ +H +++ + ++ + AL + YC I++ V+E + L+
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ-LSCW 327
Query: 307 NSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP 362
NS+I GL G E A +F L E + +S+ ++ A S ++ ++ F M
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387
Query: 363 K-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEAL 417
K ++ M++V G L+EA L E ++V W+S++S G A
Sbjct: 388 KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
Query: 418 KLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
+ +++L D + + +L A S F++ + + + V + VDF
Sbjct: 448 RAAKCLKKLDPDET-CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 179/419 (42%), Gaps = 69/419 (16%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V++ N I AK G + +A+++FDEMP R SWN+MISG+ + GR+ +AL + M
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
VK + + ++L++CA G+ G+ +H ++++ FE +V +AL+ +C I E
Sbjct: 252 KDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
VFE W+ M+ G +G+ R
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLAN--------------------------NGFEER--- 342
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
A+DLF + RS + P+ + V+ CA G +H L
Sbjct: 343 ---AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL--------------- 384
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS 336
+ E Y +I + +GG L A +LI + +EE +I+ L +S
Sbjct: 385 MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM----PVEEDTVIWSSL-----LS 435
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAV--KLFDKTKGE 394
I M+ +++ + +K+ P + + Y+ G +EAV +L K +
Sbjct: 436 ACRKIGNVEMA---KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
Query: 395 RNSVTWNSMMSGY-IHN-----GQHSEALKLYVTMRRLSVDHS--RSTFSVLFRACTSL 445
V +S+ + +H G H ++ ++Y + L+ D S +S F+ LF A T +
Sbjct: 493 EKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGFAELFDATTRI 551
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 199/506 (39%), Gaps = 117/506 (23%)
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLG------------KQVHSLLLKSGFEKFGLVG 141
M + + + ++ A+ SS + SG+ +L KQ+H+ L+K+G +
Sbjct: 1 MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60
Query: 142 SALLYF-CVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV 200
S +L F C + A LVF + N +W+ ++ G+ + A+ +F
Sbjct: 61 SRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIF-------- 112
Query: 201 VAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
+D+ C S V P T V + RLG G+ +HG
Sbjct: 113 --------------------IDML-CSSPS-VKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
+ IK+GL+ D+ I + Y + +A R++ M G + NS+I G G I+
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV-AWNSMIMGFAKCGLID 209
Query: 321 EAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS------------- 367
+A+ +F + + N +S+N MI G+ + + + + +F +M K++
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 269
Query: 368 --------------------------LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
+ +I +Y K G ++E + +F+ ++ S WN
Sbjct: 270 YLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC-WN 328
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
SM+ G +NG A+ L+ + R ++ +F + AC G++ A
Sbjct: 329 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA-----HSGEVHRAD---- 379
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLF 521
+F+ + P++ +T ++N GL E+ L
Sbjct: 380 -------------EFFRLMKE--------KYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 522 RSMLVQGVLPNAATFVAILSACSHAG 547
++M V+ + + ++LSAC G
Sbjct: 419 KNMPVE---EDTVIWSSLLSACRKIG 441
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTM--RRLSVDHSRSTFSVLFRACTSLCSFQQGQ 452
+N WN+++ G+ + A+ +++ M SV R T+ +F+A L + G+
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 453 LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHG 512
LH + K + + ++ ++ Y CG L +A R F + +V AW ++I G+A G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 513 LGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
L ++ LF M + N ++ +++S G D L++F MQ V P + +
Sbjct: 207 LIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQE-KDVKP--DGF 259
Query: 573 TCVVDL-----LGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
T V L LG S + + E+I + E + ++ AL++
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/578 (26%), Positives = 292/578 (50%), Gaps = 44/578 (7%)
Query: 139 LVGSALLYFCVRCCGIGEAELVFEEL--RDGNH-----VLWSLMLSGYVQRDMMGNAMDL 191
++ S L +F RC + +A+ V +L NH V +L + R+++ +
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRI 60
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGA 251
D +W L+ + + + +D++ M S + P+ + V+R C ++
Sbjct: 61 LKGFNGHDSFSWGCLVR-FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMEN 119
Query: 252 LHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG 311
+ GK +H +K+GL + L Y I+ AK+ ++ + + ++ NSL+
Sbjct: 120 MVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVS-WNSLLH 178
Query: 312 GLILMGRIEEAELIFYGLRETN-------------------------------PISYNLM 340
G + G ++EA +F + E + P S+N++
Sbjct: 179 GYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNIL 238
Query: 341 IKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
I GY +++ ++ F+ M KN S TMIS Y+K G++ A +LF + +++ + +
Sbjct: 239 IGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF-RLMSKKDKLVY 297
Query: 401 NSMMSGYIHNGQHSEALKLYVTM--RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
++M++ Y NG+ +ALKL+ M R + T S + A + L + G + +++
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
++ + + + T+L+D Y K G A A + F+++ + +++A+I G +G+ +E+
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEAN 417
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
LF +M+ + + PN TF +LSA SH+GL+ +G + F+SM+ + + P+ +HY +VD+
Sbjct: 418 SLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDM 476
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGF 638
LGR+GRL+EA E I MP++ + +WGALL AS ++E GE A L+ +P
Sbjct: 477 LGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYL 536
Query: 639 VILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIE 676
L+ +Y+ +GRW T+R ++ +L K GCSW+E
Sbjct: 537 SHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 201/484 (41%), Gaps = 84/484 (17%)
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
SW ++ SQ ++ E + + MH S + + + ++VL +C + ++ GK +H+
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 130 LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAM 189
LK+G V + L+ R I A+ F+++ + N V W+ +L GY++ + A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 190 DLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARL 249
+F K+P +D V+W +IS YA++ D A LF M
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGD-MGNACSLFSAMP--------------------- 228
Query: 250 GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
+K ++ IGG Y + + A+ +++M + ++ ++
Sbjct: 229 -------------LKSPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVSWI-TM 269
Query: 310 IGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN----- 364
I G +G ++ AE +F + + + + Y+ MI Y + + + + +LF +M +N
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 365 ----LTSL--------------------------------NTMISVYSKNGELDEAVKLF 388
L+S+ ++I +Y K G+ +A K+F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
++++V++++M+ G NG +EA L+ M + + TF+ L A +
Sbjct: 390 SNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLV 448
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALING 507
Q+G + + + +VD + G L +A S+ PN W AL+
Sbjct: 449 QEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLA 508
Query: 508 YAYH 511
H
Sbjct: 509 SGLH 512
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 173/375 (46%), Gaps = 23/375 (6%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
++ G + A+ FD++ + SWN+++ GY + G DEA + + + +S++
Sbjct: 150 SRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWN 205
Query: 108 AVLSSCARSGSLFLGKQVHSLL-LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
++SS A+ G + + S + LKS L+G V C + A F+ +
Sbjct: 206 LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGY-----VNCREMKLARTYFDAMPQ 260
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N V W M+SGY + + +A +LF M +D + + +I+ Y + + AL LF
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP-KDALKLFAQ 319
Query: 227 M--RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
M R S + P+E TL V+ ++LG G V + G+ D+ + +L + Y
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKG 379
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLM 340
A +++ ++ + ++ + ++I G + G EA +F + E N +++ +
Sbjct: 380 GDFAKAFKMFSNLNKKDTVSYS-AMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGL 438
Query: 341 IKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERN 396
+ Y+ S +++ + F M NL M+ + + G L+EA +L + N
Sbjct: 439 LSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPN 498
Query: 397 SVTWNS-MMSGYIHN 410
+ W + +++ +HN
Sbjct: 499 AGVWGALLLASGLHN 513
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/611 (26%), Positives = 279/611 (45%), Gaps = 104/611 (17%)
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
L CAR+ +L K +H+ ++K G + + + L+ +C A VF+E+ +H
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRR 229
+ W+ +L+ Q ++ G + +F +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSV-------------------------------GSS 98
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
S + P++F +++ CA LG++ G+ VH I D + +L + Y ++
Sbjct: 99 SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQ 349
AK V++S +R N IS+ M+ GYA S +
Sbjct: 159 AKAVFDS--------------------------------IRVKNTISWTAMVSGYAKSGR 186
Query: 350 IEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH 409
E++ LF + KNL S +IS + ++G+ EA +F + + ER + ++S +
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV- 245
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
AC +L + G+ +H + F + V++
Sbjct: 246 ------------------------------GACANLAASIAGRQVHGLVIALGFDSCVFI 275
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
AL+D Y+KC + A+ F+ + +V +WT+LI G A HG +++ L+ M+ GV
Sbjct: 276 SNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGV 335
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
PN TFV ++ ACSH G + G E+F SM Y + P+++HYTC++DLLGRSG L EAE
Sbjct: 336 KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395
Query: 590 EFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFS----LDPNPISGFVILSNMY 645
I+ MP D W ALL+A ++G R A+ L S DP S +++LSN+Y
Sbjct: 396 NLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP---STYILLSNIY 452
Query: 646 AILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLT 705
A WG+ + R++L +E+RKDPG S +E+ +F + +H + I+ + L
Sbjct: 453 ASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLE 512
Query: 706 ATI---NSIIP 713
+ N +P
Sbjct: 513 EEMRIRNGYVP 523
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 199/402 (49%), Gaps = 23/402 (5%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC-VKLNEISF 106
K G + A +FDEMP R +W ++++ +Q + L++ S + S ++ ++ F
Sbjct: 49 GKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVF 108
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
SA++ +CA GS+ G+QVH + S + +V S+L+ +C + A+ VF+ +R
Sbjct: 109 SALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV 168
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N + W+ M+SGY + A++LF +PV+++ +WT LISG+ + G E A +F
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE-AFSVFTE 227
Query: 227 MRRSEV-LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
MRR V + + L ++ CA L A AG+ VHGL I G D I AL + Y
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLM 340
+ AK ++ M ++ SLI G+ G+ E+A +++ +G++ N +++ +
Sbjct: 288 DVIAAKDIFSRMRHRDVVS-WTSLIVGMAQHGQAEKALALYDDMVSHGVK-PNEVTFVGL 345
Query: 341 IKGYAMSSQIEKSKRLFEKMAP-----KNLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
I + +EK + LF+ M +L ++ + ++G LDEA L
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPP 405
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV 437
+ TW +++S G+ +++ DH S+F +
Sbjct: 406 DEPTWAALLSACKRQGRGQMGIRI--------ADHLVSSFKL 439
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 148/339 (43%), Gaps = 51/339 (15%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
+ IS ++ AK+G EA +F +P++ + SW +ISG+ Q G+ EA ++ + M
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Query: 96 RSCVK-LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
R V L+ + S+++ +CA + G+QVH L++ GF+ + +AL+ +C +
Sbjct: 230 RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 289
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
A+ +F +R + V W+ ++ G Q G A
Sbjct: 290 IAAKDIFSRMRHRDVVSWTSLIVGMAQH---GQA-------------------------- 320
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
E+AL L+ M V PNE T +I C+ +G + G+ + K D I
Sbjct: 321 ---EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK-----DYGIR 372
Query: 275 GALAEFYCDRD------AIDDAKRVYESMGGEACLNVANSLIGGLILMGR----IEEAEL 324
+L + C D +D+A+ + +M +L+ GR I A+
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 325 IFYGLRETNPISYNLMIKGYAMSS---QIEKSKRLFEKM 360
+ + +P +Y L+ YA +S ++ +++R +M
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 192/695 (27%), Positives = 333/695 (47%), Gaps = 81/695 (11%)
Query: 5 LRFCPVRNCCKRVEKFRLFTTL----LRDSEPHHPHVISTNISIAHRAKTGELAEARHMF 60
+ F V + C +E+ L +L ++ HV N I+ +K G+ A +F
Sbjct: 290 VTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVF 349
Query: 61 DEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLF 120
+E+ R V S N +++G++ G ++EA + + M V + + V+S + G L
Sbjct: 350 EELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS--VDKIQPDIATVVSITSICGDLS 407
Query: 121 L---GKQVHSLLLKSGFEKFGL-VGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLML 176
G+ VH ++ + L V ++++ +C +AEL+F + H
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF---KTTTH------- 457
Query: 177 SGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERALDLFRCMRRSEVLPN 235
RD+V+W ++IS ++ ++G +A +LF+ + SE +
Sbjct: 458 ---------------------RDLVSWNSMISAFS--QNGFTHKAKNLFKEVV-SEYSCS 493
Query: 236 EFTLDCVIRI---CARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKR 292
+F+L V+ I C +L GK VH K G + A
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-------------------DLTSAFL 534
Query: 293 VYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQ--- 349
E+M L NS+I G G E+ F + I ++L+ +S+
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 594
Query: 350 -IEKSKRLFEKMAPKNLTSL-----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
+ R F +A K+L L NT+I++Y + +++ AVK+F + N +WN +
Sbjct: 595 GLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS-DPNLCSWNCV 653
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
+S N E +L+ R L ++ + TF L A T L S G H HL + F
Sbjct: 654 ISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGF 710
Query: 464 QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
QAN +V ALVD YS CG L + F + +++AW ++I+ + +HG+G +++ LF+
Sbjct: 711 QANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKE 770
Query: 524 MLVQGVL-PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRS 582
+ + PN ++F+++LSACSH+G +++GL + M+ + V P EH +VD+LGR+
Sbjct: 771 LSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRA 830
Query: 583 GRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILS 642
G+L+EA EFI + +WGALL+A + D ++G+ AE LF ++P+ S ++ L+
Sbjct: 831 GKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLA 890
Query: 643 NMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIEL 677
N Y LG W + +RK ++ L+K PG S I++
Sbjct: 891 NTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 159/708 (22%), Positives = 288/708 (40%), Gaps = 164/708 (23%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFMHRSCVKLNEISF 106
+TGEL + +FDE+ + V WN+MI+ +Q GRY A+ L +H+ NE
Sbjct: 133 GRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG----NEFDS 188
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
+ +L + + SL L ++ L C I E LV
Sbjct: 189 TTLLLAASALSSLHLSRKCSML---------------------HCLAI-ETGLV------ 220
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS-----GYARREDGCERAL 221
G+ L + +++ Y + + + +A +F M RD+V+W T+++ G+ R+ +L
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK------SL 274
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN--SIGGALAE 279
F+ M S + T CVI C+ + L G+ +HGL IK G + S+G ++
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIIS 334
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNV--ANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
Y + A+ V+E + C +V +N+++ G G EEA I ++ + I
Sbjct: 335 MYSKCGDTEAAETVFEEL---VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 338 NL--------------------MIKGYAMSSQIE---------------------KSKRL 356
++ + GY + +++ +++ L
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 357 FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE---------------------- 394
F+ ++L S N+MIS +S+NG +A LF + E
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSD 511
Query: 395 -------------------------------RNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
R+ +WNS++SG +G H E+L+ + M
Sbjct: 512 SLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAM 571
Query: 424 -RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
R + H T A +L QG+ H K+ + + + L+ Y +C
Sbjct: 572 SREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKD 631
Query: 483 LADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+ A + F I PN+ +W +I+ + + G E LFR++ ++ PN TFV +LSA
Sbjct: 632 IESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSA 688
Query: 543 CSHAGLLNDGLEIF-HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
+ G + G++ H ++ ++ P + +VD+ G L+ + + +
Sbjct: 689 STQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSIS 746
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFS-------LDPNPISGFVILS 642
W ++++A F +GE+A E LF ++PN S +LS
Sbjct: 747 A-WNSVISAHGFHG---MGEKAME-LFKELSSNSEMEPNKSSFISLLS 789
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 197/392 (50%), Gaps = 31/392 (7%)
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE-RALDLFRCMRRSE 231
S +L+ Y + + ++ LF ++ +DV+ W ++I+ A ++G A+ LF M
Sbjct: 126 SKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT--ALNQNGRYIAAVGLFIEMIHK- 182
Query: 232 VLPNEFTLDCVIRICARLGALHAGK---VVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
NEF ++ + L +LH + ++H L I+ GL D+S+ AL Y + +
Sbjct: 183 --GNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLS 240
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGY 344
A+ V+ M ++ N+++ + G ++ F + +E + ++++ +I
Sbjct: 241 SAECVFTHMEHRDIVS-WNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 345 AMSSQIEKSKRLF-----EKMAPKNLTSL-NTMISVYSKNGELDEAVKLFDKTKGERNSV 398
+ ++ + L +P+ S+ N++IS+YSK G+ + A +F++ R+ +
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC-RDVI 358
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLC---SF-QQGQLL 454
+ N++++G+ NG EA + M+ SVD + + + + TS+C SF ++G+ +
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQ--SVDKIQPDIATVV-SITSICGDLSFSREGRAV 415
Query: 455 HAHLSKTPFQAN-VYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
H + + Q+ + V +++D Y KCG A+ F + ++ +W ++I+ ++ +G
Sbjct: 416 HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGF 475
Query: 514 GSESILLFRSMLVQGVLP--NAATFVAILSAC 543
++ LF+ ++ + + +T +AIL++C
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 5/250 (2%)
Query: 363 KNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
++L + + +++ Y + GEL + LFD+ K E++ + WNSM++ NG++ A+ L++
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELK-EKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
M + +T + A +SL ++ +LH +T + + AL++ Y+K +
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 483 LADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
L+ A+ FT + ++ +W ++ +G +S+ F+SM G + TF ++SA
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPT--IEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD 600
CS L G E H + I +P + ++ + + G + AE ++ + D
Sbjct: 299 CSSIEELTLG-ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRD 356
Query: 601 GVIWGALLNA 610
+ A+LN
Sbjct: 357 VISSNAILNG 366
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 218/379 (57%), Gaps = 3/379 (0%)
Query: 314 ILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMIS 373
+L+G ++++ +G + + N ++ YA I + R+F +M +++ S +M++
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVE-NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
Y K G ++ A ++FD+ RN TW+ M++GY N +A+ L+ M+R V + +
Sbjct: 192 GYCKCGMVENAREMFDEMP-HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
+ +C L + + G+ + ++ K+ N+ +GTALVD + +CG + A F +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
+ +W+++I G A HG +++ F M+ G +P TF A+LSACSH GL+ GL
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWF 613
EI+ +M+ + + P +EHY C+VD+LGR+G+L EAE FI +M ++ + I GALL A
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKI 430
Query: 614 WKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
+K+ EV ER L + P +V+LSN+YA G+W + ++R ++ ++K PG S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 674 WIELNNNIHMFSV-EDKTH 691
IE++ I+ F++ +D+ H
Sbjct: 491 LIEIDGKINKFTMGDDQKH 509
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 172/351 (49%), Gaps = 41/351 (11%)
Query: 50 TGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAV 109
T L A +F ++ + +N +I +S +A + M +S + + I+F +
Sbjct: 64 TNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFL 123
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
+ + + + +G+Q HS +++ GF+ V ++L++ C I A +F ++ +
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC-ERALDLFRCMR 228
V W+ M++GY + M+ NA ++F +MP R++ W+ +I+GYA+ + C E+A+DLF M+
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAK--NNCFEKAIDLFEFMK 241
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
R V+ NE + VI CA LGAL G+ + +K + + +G AL + +
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWR----- 296
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSS 348
G IE+A +F GL ET+ +S++ +IKG A+
Sbjct: 297 ---------------------------CGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHG 329
Query: 349 QIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
K+ F +M P+++T ++S S G +++ +++++ K +
Sbjct: 330 HAHKAMHYFSQMISLGFIPRDVT-FTAVLSACSHGGLVEKGLEIYENMKKD 379
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 148/336 (44%), Gaps = 46/336 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V+S +A K G + AR MFDEMP R + +W+ MI+GY++ +++A+ L FM R
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
V NE +V+SSCA G+L G++ + ++KS ++G+AL+ RC I +
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A VFE L P D ++W+++I G A
Sbjct: 303 AIHVFEGL-------------------------------PETDSLSWSSIIKGLAVHGHA 331
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+A+ F M +P + T V+ C+ H G V GL I + + D+ I
Sbjct: 332 -HKAMHYFSQMISLGFIPRDVTFTAVLSACS-----HGGLVEKGLEIYENMKKDHGIEPR 385
Query: 277 LAEFYCDRDAIDDAKRVYES------MGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
L + C D + A ++ E+ M + + +L+G + E AE + L
Sbjct: 386 LEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLI 445
Query: 331 ETNPIS---YNLMIKGYAMSSQIEKSKRLFEKMAPK 363
+ P Y L+ YA + Q +K + L + M K
Sbjct: 446 KVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEK 481
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 33/246 (13%)
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
N +N ++ + + S+A Y M + + TF L +A + + G+ H
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTH 140
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA------------ 503
+ + + FQ +VYV +LV Y+ CG +A A R F + +V +WT+
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVE 200
Query: 504 -------------------LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS 544
+INGYA + ++I LF M +GV+ N V+++S+C+
Sbjct: 201 NAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 545 HAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIW 604
H G L G E + + +T + T +VD+ R G +++A +P E D + W
Sbjct: 261 HLGALEFG-ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETDSLSW 318
Query: 605 GALLNA 610
+++
Sbjct: 319 SSIIKG 324
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 247/470 (52%), Gaps = 48/470 (10%)
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
A AGK +H IK G D +I L + + A++V++ + + L+ N +I
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP-KPTLSAYNYMI 107
Query: 311 GGLILMGRIEEAELIF------------YGLR---------------------------- 330
G + G ++E L+ Y L
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 331 ----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVK 386
E + + ++ Y S ++E ++ +FE M +N+ +MIS Y G +++A +
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 387 LFDKTKGERNSVTWNSMMSGYIHNGQHSE-ALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
+F+ TK ++ V +N+M+ G+ +G+ ++ ++ +Y++M+R + STF+ + AC+ L
Sbjct: 228 IFNTTK-VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 446 CSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 505
S + GQ +HA + K+ ++ +G++L+D Y+KCG + DA+R F + NV +WT++I
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
+GY +G E++ LF M + PN TF+ LSACSH+GL++ G EIF SMQ Y +
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSM 406
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAE 625
P +EHY C+VDL+GR+G L +A EF MP D IW ALL++ ++E+ AA
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 626 KLFSLDPNPISG-FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW 674
+LF L+ + G ++ LSN+YA +W + IR+ ++ + K G SW
Sbjct: 467 ELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 196/384 (51%), Gaps = 20/384 (5%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
IS + I H K G L+ AR +FDE+P T+S++N MISGY + G E L L M S
Sbjct: 71 ISIKLLILH-LKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYS 129
Query: 98 CVKLNEISFSAVLSSCARSGSLF-----LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCC 152
K + + S VL + GS L + VH+ ++K E ++ +AL+ V+
Sbjct: 130 GEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSG 189
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
+ A VFE ++D N V + M+SGY+ + + +A ++F V+D+V + ++ G++R
Sbjct: 190 KLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSR 249
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
+ +R++D++ M+R+ PN T VI C+ L + G+ VH +K G+
Sbjct: 250 SGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIK 309
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR-- 330
+G +L + Y I+DA+RV++ M E + S+I G G EEA +F ++
Sbjct: 310 MGSSLLDMYAKCGGINDARRVFDQM-QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEF 368
Query: 331 --ETNPISYNLMIKGYAMSSQIEKSKRLFE------KMAPKNLTSLNTMISVYSKNGELD 382
E N +++ + + S ++K +FE M PK + ++ + + G+L+
Sbjct: 369 RIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK-MEHYACIVDLMGRAGDLN 427
Query: 383 EAVKLFDKTKGER-NSVTWNSMMS 405
+A + F + ER +S W +++S
Sbjct: 428 KAFE-FARAMPERPDSDIWAALLS 450
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 188/437 (43%), Gaps = 79/437 (18%)
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
GK++H+ ++K+GF+ + LL ++C + A VF+EL ++ M+SGY++
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE--VLPNEFTL 239
+ V++++ +S + DG ++ L R +LP
Sbjct: 113 HGL------------VKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRS--- 157
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
+C ++VH IK ++ D+ + AL + Y ++ A+ V+E+M
Sbjct: 158 -----LC---------RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEK-SKRLFE 358
E + S+I G + G +E+AE IF + + + YN M++G++ S + K S ++
Sbjct: 204 ENVV-CCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 359 KMAP----KNLTSL-----------------------------------NTMISVYSKNG 379
M N+++ ++++ +Y+K G
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
+++A ++FD+ + E+N +W SM+ GY NG EAL+L+ M+ ++ + TF
Sbjct: 323 GINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 440 RACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA---QRSFTSIFS 495
AC+ +G ++ + + + +VD + G L A R+
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE--R 439
Query: 496 PNVAAWTALINGYAYHG 512
P+ W AL++ HG
Sbjct: 440 PDSDIWAALLSSCNLHG 456
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 144/327 (44%), Gaps = 48/327 (14%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRY-DEALALASFMHRSCVKLNEISFSAV 109
G + +A +F+ ++ + +N M+ G+S+ G ++ + M R+ N +F++V
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH 169
+ +C+ S +G+QVH+ ++KSG +GS+LL +C GI +A VF+++++ N
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 170 VLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRR 229
W+ M+ GY + GN E AL+LF M+
Sbjct: 340 FSWTSMIDGYGKN---GNP-----------------------------EEALELFTRMKE 367
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI-- 287
+ PN T + C+ H+G V G I + + D S+ + + C D +
Sbjct: 368 FRIEPNYVTFLGALSACS-----HSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGR 422
Query: 288 -DDAKRVYE---SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN----PISYNL 339
D + +E +M ++ +L+ L G +E A + L + N P +Y
Sbjct: 423 AGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLA 482
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLT 366
+ YA + + + ++ E M + ++
Sbjct: 483 LSNVYASNDKWDNVSKIREVMKRRRIS 509
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 201/342 (58%), Gaps = 7/342 (2%)
Query: 343 GYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNS 402
G + +QI K K +++ N ++ +Y ++G D+A K+FD ERN VTWNS
Sbjct: 255 GRGIHAQIVKRKEKVDQVV------YNVLLKLYMESGLFDDARKVFDGM-SERNVVTWNS 307
Query: 403 MMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP 462
++S + E L+ M+ + S +T + + AC+ + + G+ +HA + K+
Sbjct: 308 LISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK 367
Query: 463 FQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFR 522
+ +V + +L+D Y KCG + ++R F + + ++A+W ++N YA +G E I LF
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 523 SMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRS 582
M+ GV P+ TFVA+LS CS GL GL +F M+ +RV+P +EHY C+VD+LGR+
Sbjct: 428 WMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRA 487
Query: 583 GRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILS 642
G++KEA + I MP + IWG+LLN+ ++ VGE AA++LF L+P+ +V++S
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVS 547
Query: 643 NMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMF 684
N+YA W IR+ ++ ++K+ GCSW+++ + I +F
Sbjct: 548 NIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIF 589
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER--NSVTWNSMMSGYIHNGQHSEALKL 419
PK L+ L T+ SV + LD A K+FD W +M GY NG +AL +
Sbjct: 167 PKLLSKLITLFSVCRR---LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIV 223
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSK 479
YV M ++ + SV +AC L + G+ +HA + K + + V L+ Y +
Sbjct: 224 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
G DA++ F + NV W +LI+ + E LFR M + + + AT I
Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343
Query: 540 LSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEA 599
L ACS L G EI H+ + + P + ++D+ G+ G ++ + + M +
Sbjct: 344 LPACSRVAALLTGKEI-HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTK 401
Query: 600 DGVIWGALLN 609
D W +LN
Sbjct: 402 DLASWNIMLN 411
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 29/329 (8%)
Query: 202 AWTTLISGYARREDGCER-ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
W + GY+R +G R AL ++ M S + P F++ ++ C L L G+ +H
Sbjct: 203 VWAAMAIGYSR--NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHA 260
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE 320
+K D + L + Y + DDA++V++ M E + NSLI L R+
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM-SERNVVTWNSLISVLSKKVRVH 319
Query: 321 EAELIFYGLRETN------------PISYNL--MIKGYAMSSQIEKSKRLFEKMAPKNLT 366
E +F ++E P + ++ G + +QI KSK ++
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE------KPDVP 373
Query: 367 SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
LN+++ +Y K GE++ + ++FD ++ +WN M++ Y NG E + L+ M
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFD-VMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG--TALVDFYSKCGHLA 484
V TF L C+ + G L + KT F+ + + LVD + G +
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 485 DAQRSFTSI-FSPNVAAWTALINGYAYHG 512
+A + ++ F P+ + W +L+N HG
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 175/385 (45%), Gaps = 47/385 (12%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEM---PLRTVSSWNTMISGYSQWGRYDEALA 89
H+P ++S I++ + +LA R +FD++ L T W M GYS+ G +AL
Sbjct: 165 HNPKLLSKLITLFSVCRRLDLA--RKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
+ M S ++ S S L +C L +G+ +H+ ++K EK
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRK-EKV------------ 269
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
+ V+++++L Y++ + +A +F M R+VV W +LIS
Sbjct: 270 ------------------DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
+++ E +LFR M+ + + TL ++ C+R+ AL GK +H +K
Sbjct: 312 LSKKVRVHE-MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
D + +L + Y ++ ++RV++ M + L N ++ + G IEE +F +
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD-LASWNIMLNCYAINGNIEEVINLFEWM 429
Query: 330 RET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGE 380
E+ + I++ ++ G + + E LFE+M + L ++ + + G+
Sbjct: 430 IESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGK 489
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMS 405
+ EAVK+ + + ++ W S+++
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLN 514
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/621 (26%), Positives = 270/621 (43%), Gaps = 98/621 (15%)
Query: 92 SFMHRSCVKLNEISFSAVLSSC-ARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC-V 149
S++H + E + +S+ ++S L KQV S ++ SG + LL FC +
Sbjct: 9 SYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTL 68
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
R C + A +F+ N L++ +L+ Y +P+
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYS------------SSLPLH----------- 105
Query: 210 YARREDGCERALDLFRCM-RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
A FR M RS PN F V++ L + + +VH K G
Sbjct: 106 -------ASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH 158
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
+ AL Y + I A +F
Sbjct: 159 LYVVVQTALLHSYASS-------------------------------VSHITLARQLFDE 187
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLF 388
+ E N +S+ M+ GYA S I + LFE M +++ S N +++ ++NG EAV LF
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
+ E S+ + T + AC +
Sbjct: 248 RRMINEP-------------------------------SIRPNEVTVVCVLSACAQTGTL 276
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 508
Q + +HA + ++V+V +LVD Y KCG+L +A F ++ AW ++IN +
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336
Query: 509 AYHGLGSESILLFRSML---VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
A HG E+I +F M+ + + P+ TF+ +L+AC+H GL++ G F M + +
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAE 625
P IEHY C++DLLGR+GR EA E ++ M ++AD IWG+LLNA +++ E A +
Sbjct: 397 EPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVK 456
Query: 626 KLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFS 685
L +L+PN +++N+Y +G W + RK ++ K PG S IE++N +H F
Sbjct: 457 NLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFY 516
Query: 686 VEDKTHAYSDVIYATVDHLTA 706
DK+H ++ IY +D L +
Sbjct: 517 SLDKSHPETEEIYMILDSLIS 537
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 170/371 (45%), Gaps = 19/371 (5%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF---MHRSCVKLNEISFSAV 109
L+ AR +FD + +++ YS + A + F ++RS + N + V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY-FCVRCCGIGEAELVFEELRDGN 168
L S S F VH+ L KSGF + +V +ALL+ + I A +F+E+ + N
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM- 227
V W+ MLSGY + + NA+ LF MP RDV +W +++ + E A+ LFR M
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLE-AVSLFRRMI 251
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ PNE T+ CV+ CA+ G L K +H + L D + +L + Y +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN-------PISYNLM 340
++A V++ M + L NS+I L GR EEA +F + + N I++ +
Sbjct: 312 EEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 341 IKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
+ + K + F+ M + + +I + + G DEA+++ K +
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 396 NSVTWNSMMSG 406
+ W S+++
Sbjct: 431 DEAIWGSLLNA 441
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 201/348 (57%), Gaps = 8/348 (2%)
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN-------TMISVYSKNGELDEAV 385
N +Y + K +Q + R K L +N ++ Y+ G+L EA
Sbjct: 111 NEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREAR 170
Query: 386 KLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
LF++ + E + TWN++++ Y ++ + ++ + R+ V + + L ++C +L
Sbjct: 171 SLFERIR-EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANL 229
Query: 446 CSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 505
F +G H ++ K N +VGT+L+D YSKCG L+ A++ F + +V+ + A+I
Sbjct: 230 GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMI 289
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
G A HG G E I L++S++ QG++P++ATFV +SACSH+GL+++GL+IF+SM+ Y +
Sbjct: 290 RGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGI 349
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAE 625
P +EHY C+VDLLGRSGRL+EAEE I +MP++ + +W + L +S D E GE A +
Sbjct: 350 EPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
Query: 626 KLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
L L+ +V+LSN+YA + RW R+ ++ + K PG S
Sbjct: 410 HLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 180/420 (42%), Gaps = 75/420 (17%)
Query: 14 CKRVEKFR-LFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWN 72
CK ++ + + ++ HH + +S + H + T L+ A + ++P +V +N
Sbjct: 19 CKSLQNLKQIHAQIITIGLSHHTYPLS---KLLHLSSTVCLSYALSILRQIPNPSVFLYN 75
Query: 73 TMISG----------YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFL- 121
T+IS + + YD+ L+ S + V+ NE ++ ++ +
Sbjct: 76 TLISSIVSNHNSTQTHLAFSLYDQILSSRS----NFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 122 GKQVHSLLLK----SGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLS 177
G+ +H+ +LK ++F V +AL+ F C + EA +FE +R+
Sbjct: 132 GRALHAHVLKFLEPVNHDRF--VQAALVGFYANCGKLREARSLFERIREP---------- 179
Query: 178 GYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE--DGCERALDLFRCMRRSEVLPN 235
D+ W TL++ YA E D E L LF R +V PN
Sbjct: 180 ---------------------DLATWNTLLAAYANSEEIDSDEEVLLLFM---RMQVRPN 215
Query: 236 EFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE 295
E +L +I+ CA LG G H +K+ L + +G +L + Y + A++V++
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD 275
Query: 296 SMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQI 350
M + ++ N++I GL + G +E LI GL + ++ + I + S +
Sbjct: 276 EM-SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL-VPDSATFVVTISACSHSGLV 333
Query: 351 EKSKRLFEKMA------PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
++ ++F M PK + ++ + ++G L+EA + K + N+ W S +
Sbjct: 334 DEGLQIFNSMKAVYGIEPK-VEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/645 (26%), Positives = 295/645 (45%), Gaps = 78/645 (12%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
S +++LS+C + G QVH+ + SG E ++ L+ F EA+ + E
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN- 103
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
D+ +P W LI+ YA+ E E + +
Sbjct: 104 ------------------------SDILHPLP------WNVLIASYAKNEL-FEEVIAAY 132
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY--- 281
+ M + P+ FT V++ C + G+VVHG + AL Y
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 282 -------------CDRDAI---------------DDAKRVYESM---GGEACLNVANSLI 310
+RDA+ +A +++ M G E + N +
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIIS 252
Query: 311 GGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT 366
GG + G A + +R +P++ + +K ++ I K + +
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYD 312
Query: 367 SL----NTMISVYSKNGELDEAVKLFDKTKGERNSV-TWNSMMSGYIHNGQHSEALKLYV 421
+ NT+I++YSK +L A+ +F +T E NS+ TWNS++SGY + EA L
Sbjct: 313 GIDNVRNTLITMYSKCKDLRHALIVFRQT--EENSLCTWNSIISGYAQLNKSEEASHLLR 370
Query: 422 TMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH-LSKTPFQANVYVGTALVDFYSKC 480
M + T + + C + + Q G+ H + L + F+ + +LVD Y+K
Sbjct: 371 EMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKS 430
Query: 481 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
G + A++ + + +T+LI+GY G G ++ LF+ M G+ P+ T VA+L
Sbjct: 431 GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 541 SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD 600
SACSH+ L+++G +F MQ Y + P ++H++C+VDL GR+G L +A++ I+ MP +
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Query: 601 GVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKR 660
G W LLNA + ++G+ AAEKL + P +V+++NMYA G W + +R
Sbjct: 551 GATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTI 610
Query: 661 LQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLT 705
++ L ++KDPGC+WI+ ++ +FSV D + + Y +D L
Sbjct: 611 MRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLN 655
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 215/474 (45%), Gaps = 20/474 (4%)
Query: 55 EARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCA 114
EA+ + + + WN +I+ Y++ ++E +A M ++ + ++ +VL +C
Sbjct: 96 EAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACG 155
Query: 115 RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
+ + G+ VH + S ++ V +AL+ R +G A +F+ + + + V W+
Sbjct: 156 ETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRS 230
+++ Y M A +LF KM V+ W +ISG + AL L MR
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITW-NIISGGCLQTGNYVGALGLISRMRNF 274
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+ + ++ C+ +GA+ GK +HGL I D +++ L Y + A
Sbjct: 275 PTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHA 334
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYA 345
V+ E L NS+I G + + EEA E++ G + N I+ ++ A
Sbjct: 335 LIVFRQT-EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF-QPNSITLASILPLCA 392
Query: 346 MSSQIEKSKR----LFEKMAPKNLTSL-NTMISVYSKNGELDEAVKLFDKTKGERNSVTW 400
+ ++ K + + K+ T L N+++ VY+K+G++ A ++ D +R+ VT+
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSD-LMSKRDEVTY 451
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS- 459
S++ GY + G+ AL L+ M R + T + AC+ +G+ L +
Sbjct: 452 TSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQC 511
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
+ + + + +VD Y + G LA A+ ++ + P+ A W L+N HG
Sbjct: 512 EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 163/391 (41%), Gaps = 56/391 (14%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALALASF 93
+S N I A G +EA +FD+M +V +WN + G Q G Y AL L S
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
M L+ ++ L +C+ G++ LGK++H L + S ++ V + L+ +C
Sbjct: 271 MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKD 330
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
+ A +VF + + + W+ ++SGY Q + A L +M L++G+
Sbjct: 331 LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM----------LVAGFQ-- 378
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL-----CIKDGLD 268
PN TL ++ +CAR+ L GK H C KD
Sbjct: 379 --------------------PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
NS L + Y I AK+V + M + SLI G G A +F
Sbjct: 419 LWNS----LVDVYAKSGKIVAAKQVSDLMSKRDEVTY-TSLIDGYGNQGEGGVALALFKE 473
Query: 329 LRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN-----LTSLNTMISVYSKNG 379
+ + + ++ ++ + S + + +RLF KM + L + M+ +Y + G
Sbjct: 474 MTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAG 533
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMMSG-YIH 409
L +A + + + TW ++++ +IH
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIH 564
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 406 GYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQA 465
G++H+ + +L + +S D + + L AC + +F G +HAH + +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 466 NVYVGTALVDFYSKCGHLADAQRSF--TSIFSPNVAAWTALINGYAYHGLGSESILLFRS 523
+ + LV FYS +AQ + I P W LI YA + L E I ++
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAKNELFEEVIAAYKR 134
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC--VVDLLGR 581
M+ +G+ P+A T+ ++L AC + G + S+++ + Y C ++ + R
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL---YVCNALISMYKR 191
Query: 582 SGRLKEAEEFINQMPIEADGVIWGALLN 609
+ A ++M E D V W A++N
Sbjct: 192 FRNMGIARRLFDRM-FERDAVSWNAVIN 218
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 248/519 (47%), Gaps = 30/519 (5%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
++ +F R+ LI G E ++ F M R V P+ T V++ +
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENAR-FESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
+LG G+ +H +K+ +D D+ + +L + Y + A +V+E
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPD-------- 189
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS 367
RI++ ++ + N++I GY + + + LF M +N S
Sbjct: 190 ----------RIKKESILIW----------NVLINGYCRAKDMHMATTLFRSMPERNSGS 229
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
+T+I Y +GEL+ A +LF+ E+N V+W ++++G+ G + A+ Y M
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMP-EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+ + T + + AC+ + G +H ++ + + +GTALVD Y+KCG L A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
F+++ ++ +WTA+I G+A HG ++I FR M+ G P+ F+A+L+AC ++
Sbjct: 349 TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS 408
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
++ GL F SM++ Y + PT++HY VVDLLGR+G+L EA E + MPI D W AL
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
A K E ++ L LDP ++ L +A G R LQ
Sbjct: 469 YRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKE 528
Query: 668 KDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTA 706
+ G S+IEL+ ++ FS D +H + I +D + +
Sbjct: 529 RSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIIS 567
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 171/376 (45%), Gaps = 46/376 (12%)
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
N +I G ++ R++ ++ M R VK + ++F VL S ++ G +LG+ +H+ LK
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 132 S------------------------GFEKFG-----------LVGSALLYFCVRCCGIGE 156
+ F+ F L+ + L+ R +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A +F + + N WS ++ GYV + A LF MP ++VV+WTTLI+G+++ D
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD- 273
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
E A+ + M + PNE+T+ V+ C++ GAL +G +HG + +G+ D +IG A
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA 333
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF----YGLRET 332
L + Y +D A V+ +M + L+ ++I G + GR +A F Y +
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILS-WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKP 392
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKL 387
+ + + ++ SS+++ F+ M L ++ + + G+L+EA +L
Sbjct: 393 DEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Query: 388 FDKTKGERNSVTWNSM 403
+ + TW ++
Sbjct: 453 VENMPINPDLTTWAAL 468
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 39/281 (13%)
Query: 16 RVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMI 75
R + + TTL R + ST I +GEL A+ +F+ MP + V SW T+I
Sbjct: 208 RAKDMHMATTLFRSMPERNSGSWST--LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLI 265
Query: 76 SGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE 135
+G+SQ G Y+ A++ M +K NE + +AVLS+C++SG+L G ++H +L +G +
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 136 KFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
+G+AL+ +C + A VF + NH +D++
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVFSNM---NH------------KDIL---------- 360
Query: 196 PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
+WT +I G+A +A+ FR M S P+E V+ C L++
Sbjct: 361 ------SWTAMIQGWA-VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC-----LNSS 408
Query: 256 KVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
+V GL D + D +I L + D + A ++ E+
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEA 449
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 180/658 (27%), Positives = 314/658 (47%), Gaps = 61/658 (9%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G+L FD M R SWN ++ G +G +E L S + + N +
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVL 132
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
V+ +C F G+++H +++SGF CGI +
Sbjct: 133 VIHAC--RSLWFDGEKIHGYVIRSGF-----------------CGISSVQ---------- 163
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM- 227
+ +L Y D + +A LF +M RDV++W+ +I Y + ++ L LF+ M
Sbjct: 164 ----NSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPV-VGLKLFKEMV 217
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF-DNSIGGALAEFYCDRDA 286
++ P+ T+ V++ C + + G+ VHG I+ G D D + +L + Y
Sbjct: 218 HEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFD 277
Query: 287 IDDAKRVYESMGGEACLNVA--NSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLM 340
+D A RV++ C N+ NS++ G + R +EA +F+ + E + ++ +
Sbjct: 278 VDSAFRVFDET---TCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL 334
Query: 341 IKGYAMSSQIEKSKRL----FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERN 396
++ Q K + + N +L+++I Y+ +D+A + D + ++
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD-SMTYKD 393
Query: 397 SVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
V+ ++M+SG H G+ EA+ ++ MR + T L AC+ + + H
Sbjct: 394 VVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHG 450
Query: 457 HLSKTPFQAN-VYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
+ N + VGT++VD Y+KCG + A+R+F I N+ +WT +I+ YA +GL
Sbjct: 451 IAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPD 510
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
+++ LF M +G PNA T++A LSAC+H GL+ GL IF SM + P+++HY+C+
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCI 569
Query: 576 VDLLGRSGRLKEAEEFINQMP--IEADGVIWGALLNA--SWFWKDIEVGERAAEKLFSLD 631
VD+L R+G + A E I +P ++A WGA+L+ + F K I E AE L L+
Sbjct: 570 VDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL-ELE 628
Query: 632 PNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDK 689
P SG+++ S+ +A W +R+ ++ ++R G S + N F DK
Sbjct: 629 PLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 172/383 (44%), Gaps = 51/383 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V N I +K ++ A +FDE R + SWN++++G+ RYDEAL + M +
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
V+++E++ ++L C K +H ++++ G+E
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE--------------------- 360
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG--YARRE 214
N V S ++ Y ++ +A + M +DVV+ +T+ISG +A R
Sbjct: 361 ----------SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF-DNSI 273
D A+ +F MR + PN T+ ++ C+ L K HG+ I+ L D S+
Sbjct: 411 D---EAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET- 332
G ++ + Y AI+ A+R ++ + + ++ +I + G ++A +F +++
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNIIS-WTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 333 ---NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAV 385
N ++Y + ++K +F+ M ++ L + ++ + S+ GE+D AV
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAV 583
Query: 386 KLFDKTKGE--RNSVTWNSMMSG 406
+L + + W +++SG
Sbjct: 584 ELIKNLPEDVKAGASAWGAILSG 606
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Query: 410 NGQHSEALKLYVTMRRLSVDHSRS-TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
+G+ E + Y ++R V + F ++F+AC L + ++
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKL-------------------SWLF 62
Query: 469 VGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG 528
G ++ DFY KCG L R F + S + +W ++ G +G E + F + V G
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 529 VLPNAATFVAILSAC 543
PN +T V ++ AC
Sbjct: 123 FEPNTSTLVLVIHAC 137
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 169/614 (27%), Positives = 276/614 (44%), Gaps = 110/614 (17%)
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKF--GLVGSALLYFCVRCCGIGEAELVFEELRD 166
+L CA L GK++H++L SG +K + +AL F
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQF------------------- 52
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV--RDVVAWTTLISGYARREDGCERALDLF 224
Y M A LF ++P+ +D V WTTL+S ++R ++ LF
Sbjct: 53 ------------YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRY-GLLVNSMKLF 99
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
MRR V ++ ++ C+ +CA+L L + HG+ +K
Sbjct: 100 VEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK-------------------- 139
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGY 344
MG + V N+L+ G + E + IF L E + +S+ +++
Sbjct: 140 ------------MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 345 AMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+E+ + +F +M ERN+V W M+
Sbjct: 188 VKWEGLERGREVFHEMP--------------------------------ERNAVAWTVMV 215
Query: 405 SGYIHNGQHSEALKLYVTMR-RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
+GY+ G E L+L M R + T + AC + G+ +H + K
Sbjct: 216 AGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEM 275
Query: 464 QA-------NVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
+V VGTALVD Y+KCG++ + F + NV W AL +G A HG G
Sbjct: 276 MMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRM 335
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
I +F M ++ V P+ TF A+LSACSH+G++++G FHS++ Y + P ++HY C+V
Sbjct: 336 VIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMV 393
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPIS 636
DLLGR+G ++EAE + +MP+ + V+ G+LL + +E+ ER +L + P
Sbjct: 394 DLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTE 453
Query: 637 GFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDV 696
+++SNMY GR +R L+ +RK PG S I +N+++H FS D++H +
Sbjct: 454 YQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKE 513
Query: 697 IYATVDHLTATINS 710
IY ++ + I S
Sbjct: 514 IYLKLNEVIERIRS 527
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 223/503 (44%), Gaps = 37/503 (7%)
Query: 3 LFLRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDE 62
L LR C R+ + ++ L L P +N A +GE+ A+ +FDE
Sbjct: 11 LLLRHCAHRSFLRPGKE--LHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDE 68
Query: 63 MPL--RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLF 120
+PL + W T++S +S++G ++ L M R V+++++S + CA+ L
Sbjct: 69 IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYV 180
+Q H + +K G V +AL+ +C + E + +FEEL + + V W+++L V
Sbjct: 129 FAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 181 QRDMMGNAMDLFGKMPVRDVVAWTTLISGYA----RREDGCERALDLFRCMRRSEVLPNE 236
+ + + ++F +MP R+ VAWT +++GY RE A +FRC N
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHG----LNF 244
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDF-------DNSIGGALAEFYCDRDAIDD 289
TL ++ CA+ G L G+ VH +K + D +G AL + Y ID
Sbjct: 245 VTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDS 304
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL-RETNP--ISYNLMIKGYAM 346
+ V+ M + N+L GL + G+ +F + RE P +++ ++ +
Sbjct: 305 SMNVFRLMRKRNVVT-WNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSH 363
Query: 347 SSQIEKSKRLFEK-----MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
S +++ R F + PK + M+ + + G ++EA L + N V
Sbjct: 364 SGIVDEGWRCFHSLRFYGLEPK-VDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLG 422
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF------RACTSLCSFQQGQLLH 455
S++ +G+ A ++ + ++S ++ + +L + + +G L
Sbjct: 423 SLLGSCSVHGKVEIAERIKRELIQMSPGNTE--YQILMSNMYVAEGRSDIADGLRGSLRK 480
Query: 456 AHLSKTPFQANVYVGTALVDFYS 478
+ K P +++YV ++ F S
Sbjct: 481 RGIRKIPGLSSIYVNDSVHRFSS 503
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 275/562 (48%), Gaps = 38/562 (6%)
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
N +L + +++ Y + + A +F MP R+VV+WT LI+GY + + + LF M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE-QEGFCLFSSM 153
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY--C-DR 284
S PNEFTL V+ C GK VHGL +K GL + A+ Y C D
Sbjct: 154 L-SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 285 DAIDDAKRVYESM------------GGEACLNVANSLIGGLILMGRIEEAELIFYGLRET 332
A +A V+E++ C N+ IG + M ++ + +
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM----HSDGVGFDRATL 264
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT-----MISVYSKNGE-LDEAVK 386
I +L + +++ K + K+ T +I VYS+ E + K
Sbjct: 265 LNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYK 324
Query: 387 LFDKTKGERNSVTWNSMMSGY-IHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
LF + R+ V WN +++ + +++ + A+ L+ +R+ + TFS + +AC L
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYDPE--RAIHLFGQLRQEKLSPDWYTFSSVLKACAGL 382
Query: 446 CSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 505
+ + +HA + K F A+ + +L+ Y+KCG L R F + S +V +W +++
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
Y+ HG + +F+ M + P++ATF+A+LSACSHAG + +GL IF SM
Sbjct: 443 KAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPET 499
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAE 625
P + HY CV+D+L R+ R EAEE I QMP++ D V+W ALL + + +G+ AA+
Sbjct: 500 LPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAAD 559
Query: 626 KLFSL-DPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMF 684
KL L +P ++ +SN+Y G + + K +++ +RK+P SW E+ N +H F
Sbjct: 560 KLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
Query: 685 SVEDKTHAYSDVIYATVDHLTA 706
+ + + +Y + L +
Sbjct: 620 ASGGRHRPDKEAVYRELKRLIS 641
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 219/506 (43%), Gaps = 71/506 (14%)
Query: 34 HPHVISTNISIAH-----RAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL 88
HP+ S N+ +A+ AK G + AR +FD MP R V SW +I+GY Q G E
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF 147
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L S M C NE + S+VL+SC GKQVH L LK G V +A++
Sbjct: 148 CLFSSMLSHCFP-NEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMY 202
Query: 149 VRC---CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTT 205
RC EA VFE ++ N V W+ M++ + ++ A+ +F +M V
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV----- 257
Query: 206 LISGYARREDGCERALDLFRC---MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
G +RA L C + S+++PNE V + C +L H L
Sbjct: 258 ----------GFDRATLLNICSSLYKSSDLVPNE-----VSKCCLQL---------HSLT 293
Query: 263 IKDGLDFDNSIGGALAEFYCDR-DAIDDAKRVYESMGGEACLNVANSLIGGLI------- 314
+K GL + AL + Y + + D +++ M + N +I
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERA 353
Query: 315 --LMGRIEEAELI--FYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT 370
L G++ + +L +Y L+ +A+S + K F +A L N+
Sbjct: 354 IHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGF--LADTVLN--NS 409
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
+I Y+K G LD +++FD R+ V+WNSM+ Y +GQ L ++ +++ ++
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDS-RDVVSWNSMLKAYSLHGQVDSILPVF---QKMDINP 465
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP---FQANVYVGTALVDFYSKCGHLADAQ 487
+TF L AC+ ++G + + + P Q N Y ++D S+ A+A+
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY--ACVIDMLSRAERFAEAE 523
Query: 488 RSFTSI-FSPNVAAWTALINGYAYHG 512
+ P+ W AL+ HG
Sbjct: 524 EVIKQMPMDPDAVVWIALLGSCRKHG 549
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF--QANVYVGTALVDFYSKCGHLADAQ 487
S+ ++ LF+AC + G LH H+ P+ NV + L++ Y+KCG++ A+
Sbjct: 57 QSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYAR 116
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
+ F ++ NV +WTALI GY G E LF SML PN T ++L++C +
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTSCRY 173
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 198/355 (55%), Gaps = 6/355 (1%)
Query: 357 FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEA 416
F ++P + ++N +I K GE A K+ + ++N +TWN M+ GY+ N Q+ EA
Sbjct: 91 FLSLSP-GVCNINLIIESLMKIGESGLAKKVL-RNASDQNVITWNLMIGGYVRNVQYEEA 148
Query: 417 LKLYVTMRRLS-VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
LK M + + ++ +F+ AC L + +H+ + + + N + +ALVD
Sbjct: 149 LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVD 208
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
Y+KCG + ++ F S+ +V+ W A+I G+A HGL +E+I +F M + V P++ T
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 536 FVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
F+ +L+ CSH GLL +G E F M + + P +EHY +VDLLGR+GR+KEA E I M
Sbjct: 269 FLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
Query: 596 PIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKT 655
PIE D VIW +LL++S +K+ E+GE A + +L +V+LSN+Y+ +W
Sbjct: 329 PIEPDVVIWRSLLSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQ 385
Query: 656 TIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINS 710
+R+ + +RK G SW+E IH F D +H + IY ++ L S
Sbjct: 386 KVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKS 440
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 147/337 (43%), Gaps = 42/337 (12%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL-ALASF 93
P V + N+ I K GE A+ + + V +WN MI GY + +Y+EAL AL +
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
+ + +K N+ SF++ L++CAR G L K VHSL++ SG E ++ SAL+ +C
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
IG + VF ++ + +W+ M++G+ + A+ +F +M V
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS------------ 263
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL-----CIKDGLD 268
P+ T ++ C+ G L GK GL I+ L+
Sbjct: 264 --------------------PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
GA+ + + +A + ESM E + + SL+ E E+
Sbjct: 304 H----YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQN 359
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
L + Y L+ Y+ + + E ++++ E M+ + +
Sbjct: 360 LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 28/316 (8%)
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFG--LVGSALLYF-CVRCCGIGEAELVFEELR 165
VL SC + Q H+ + K G+ + LV + Y C R L F L
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 166 DG----NHVLWSLMLSGY--VQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
G N ++ SLM G + + ++ NA D ++V+ W +I GY R E
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASD-------QNVITWNLMIGGYVRNVQYEEA 148
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
L + +++ PN+F+ + CARLG LH K VH L I G++ + + AL +
Sbjct: 149 LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVD 208
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPI 335
Y I ++ V+ S+ +++ N++I G G EA +F + + I
Sbjct: 209 VYAKCGDIGTSREVFYSVKRND-VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSI 267
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMA------PKNLTSLNTMISVYSKNGELDEAVKLFD 389
++ ++ + +E+ K F M+ PK L M+ + + G + EA +L +
Sbjct: 268 TFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPK-LEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 390 KTKGERNSVTWNSMMS 405
E + V W S++S
Sbjct: 327 SMPIEPDVVIWRSLLS 342
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 215/386 (55%), Gaps = 10/386 (2%)
Query: 312 GLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTM 371
G +G+ L +G R + ++ N +I Y + + ++F++M +++ S N++
Sbjct: 123 GSCYLGKQVHGHLCKFGPR-FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSL 181
Query: 372 ISVYSKNGELDEAVKLF----DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
+S Y++ G++ +A LF DKT V+W +M+SGY G + EA+ + M+
Sbjct: 182 LSGYARLGQMKKAKGLFHLMLDKT-----IVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
++ + + +C L S + G+ +H + + F V AL++ YSKCG ++ A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
+ F + +V +W+ +I+GYAYHG +I F M V PN TF+ +LSACSH G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
+ +GL F M+ Y++ P IEHY C++D+L R+G+L+ A E MP++ D IWG+L
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
L++ +++V A + L L+P + +V+L+N+YA LG+W + +RK +++ ++
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 668 KDPGCSWIELNNNIHMFSVEDKTHAY 693
K PG S IE+NN + F D + +
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPF 502
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 180/369 (48%), Gaps = 16/369 (4%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKL-NEISFS 107
K ++ A +F+++ V +N++I Y+ Y + + + + R +L + +F
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+ SCA GS +LGKQVH L K G + +AL+ ++ + +A VF+E+ +
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCE-RALDLFRC 226
+ + W+ +LSGY + M A LF M + +V+WT +ISGY GC A+D FR
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI--GCYVEAMDFFRE 231
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M+ + + P+E +L V+ CA+LG+L GK +H + G + AL E Y
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIK 342
I A +++ M G+ ++ + ++I G G A F ++ + N I++ ++
Sbjct: 292 ISQAIQLFGQMEGKDVISWS-TMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLS 350
Query: 343 GYAMSSQIEKSKRLFEKM------APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERN 396
+ ++ R F+ M PK + +I V ++ G+L+ AV++ + +
Sbjct: 351 ACSHVGMWQEGLRYFDMMRQDYQIEPK-IEHYGCLIDVLARAGKLERAVEITKTMPMKPD 409
Query: 397 SVTWNSMMS 405
S W S++S
Sbjct: 410 SKIWGSLLS 418
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
E + VIS N ++ A+ G++ +A+ +F M +T+ SW MISGY+ G Y EA+
Sbjct: 169 EMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDF 228
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
M + ++ +EIS +VL SCA+ GSL LGK +H + GF K V +AL+ +
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 151 CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTL 206
C I +A +F ++ + + WS M+SGY A++ F +M V + + L
Sbjct: 289 CGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 207 ISGYARREDGCERALDLFRCMRRS-EVLPNEFTLDCVIRICARLGALH-AGKVVHGLCIK 264
+S + L F MR+ ++ P C+I + AR G L A ++ + +K
Sbjct: 349 LSA-CSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Query: 265 DGLDFDNSIGGAL 277
D+ I G+L
Sbjct: 408 P----DSKIWGSL 416
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 39/277 (14%)
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
+ M+ K ++D A +LF++ N +NS++ Y HN + + +++Y + R S
Sbjct: 45 VTKMVDFCDKIEDMDYATRLFNQVSNP-NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKS 103
Query: 428 VD-HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+ R TF +F++C SL S G+ +H HL K + +V AL+D Y K L DA
Sbjct: 104 FELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDA 163
Query: 487 QRSFTSIFSPNVAAWTALINGYA-----------------------------YHGLGS-- 515
+ F ++ +V +W +L++GYA Y G+G
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV 223
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG--LEIFHSMQICYRVTPTIEHYT 573
E++ FR M + G+ P+ + +++L +C+ G L G + ++ + + T
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC---N 280
Query: 574 CVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
++++ + G + +A + QM D + W +++
Sbjct: 281 ALIEMYSKCGVISQAIQLFGQME-GKDVISWSTMISG 316
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 216/381 (56%), Gaps = 5/381 (1%)
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
N +I Y +++LF++M KNL + N+++ Y+K+G++ A +FD+ ER+
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM-SERDV 205
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRL-SVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
VTW+SM+ GY+ G++++AL+++ M R+ S + T + AC L + +G+ +H
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF--TSIFSPNVAAWTALINGYAYHGLG 514
++ V + T+L+D Y+KCG + DA F S+ + W A+I G A HG
Sbjct: 266 YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFI 325
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC 574
ES+ LF M + P+ TF+ +L+ACSH GL+ + F S++ P EHY C
Sbjct: 326 RESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYAC 384
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNP 634
+VD+L R+G +K+A +FI++MPI+ G + GALLN ++E+ E +KL L P+
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHN 444
Query: 635 ISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYS 694
+V L+N+YAI ++ ++R+ ++ ++K G S ++L+ H F DKTH +S
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 695 DVIYATVDHLTATINSIIPFN 715
D IYA + A +N + ++
Sbjct: 505 DKIYAVLQLTGAWMNLDVDYD 525
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 200/418 (47%), Gaps = 20/418 (4%)
Query: 10 VRNCCKRV-EKFRLFTTL----LRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMP 64
+R+ CK + E +++ T L L + EP +S +S + + +G++ A ++
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEP----FVSQTLSFSALSSSGDVDYAYKFLSKLS 69
Query: 65 LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQ 124
WN +I G+S ++++++ M R + + +++ ++ S +R + LG
Sbjct: 70 DPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGS 129
Query: 125 VHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDM 184
+H ++KSG E + + L++ A +F+E+ N V W+ +L Y +
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGD 189
Query: 185 MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF-RCMRRSEVLPNEFTLDCVI 243
+ +A +F +M RDVV W+++I GY +R + +AL++F + MR NE T+ VI
Sbjct: 190 VVSARLVFDEMSERDVVTWSSMIDGYVKRGE-YNKALEIFDQMMRMGSSKANEVTMVSVI 248
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRV-YESMGGEAC 302
CA LGAL+ GK VH + L + +L + Y +I DA V Y + E
Sbjct: 249 CACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETD 308
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKS----K 354
+ N++IGGL G I E+ +F+ +RE+ + I++ ++ + ++++ K
Sbjct: 309 ALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFK 368
Query: 355 RLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
L E A M+ V S+ G + +A + + ++++G I++G
Sbjct: 369 SLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGN 426
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 131/307 (42%), Gaps = 41/307 (13%)
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSR 432
S S +G++D A K K N WN ++ G+ ++ +++ +Y+ M R +
Sbjct: 50 SALSSSGDVDYAYKFLSKLSDPPN-YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDH 108
Query: 433 STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
T+ L ++ + L + + G LH + K+ + ++++ L+ Y A A++ F
Sbjct: 109 MTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDE 168
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL---------------------- 530
+ N+ W ++++ YA G + L+F M + V+
Sbjct: 169 MPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIF 228
Query: 531 ----------PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
N T V+++ AC+H G LN G + H + + T+ T ++D+
Sbjct: 229 DQMMRMGSSKANEVTMVSVICACAHLGALNRG-KTVHRYILDVHLPLTVILQTSLIDMYA 287
Query: 581 RSGRLKEAEEFINQMPI-EADGVIW----GALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
+ G + +A + + E D ++W G L + + + +++ + E +DP+ I
Sbjct: 288 KCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES--KIDPDEI 345
Query: 636 SGFVILS 642
+ +L+
Sbjct: 346 TFLCLLA 352
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 227/437 (51%), Gaps = 33/437 (7%)
Query: 289 DAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----EL--------------IFYGL 329
+A++V++ M L N++I GLI EE E+ +F G
Sbjct: 43 NARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS 101
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
+S I GY + +E +L +++ +Y +NG+L + ++
Sbjct: 102 AGLRSVSIGQQIHGYTIKYGLEL-----------DLVVNSSLAHMYMRNGKLQDG-EIVI 149
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
++ RN V WN+++ G NG L LY M+ ++ TF + +C+ L
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
QGQ +HA K + V V ++L+ YSKCG L DA ++F+ + W+++I+ Y
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 510 YHGLGSESILLFRSMLVQGVLP-NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
+HG G E+I LF +M Q + N F+ +L ACSH+GL + GLE+F M Y P
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLF 628
++HYTCVVDLLGR+G L +AE I MPI+ D VIW LL+A K+ E+ +R +++
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Query: 629 SLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVED 688
+DPN + +V+L+N++A RW + +RK ++ ++K+ G SW E +H F + D
Sbjct: 390 QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGD 449
Query: 689 KTHAYSDVIYATVDHLT 705
++ + S IY+ + LT
Sbjct: 450 RSQSKSKEIYSYLKELT 466
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 45/380 (11%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
+S+NI I + G+L AR +FDEMP R +++WN MI+G Q+ +E L+L MH
Sbjct: 26 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 85
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
+E + +V S A S+ +G+Q+H +K G E +V S+L + +R
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG----- 140
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
+L+DG V+ S MPVR++VAW TLI G A ++GC
Sbjct: 141 -----KLQDGEIVIRS---------------------MPVRNLVAWNTLIMGNA--QNGC 172
Query: 218 -ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
E L L++ M+ S PN+ T V+ C+ L G+ +H IK G ++ +
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 232
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET---- 332
L Y + DA + + E + + +S+I G+ +EA +F + E
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDEDEV-MWSSMISAYGFHGQGDEAIELFNTMAEQTNME 291
Query: 333 -NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVK 386
N +++ ++ + S +K LF+ M K L ++ + + G LD+A
Sbjct: 292 INEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEA 351
Query: 387 LFDKTKGERNSVTWNSMMSG 406
+ + + V W +++S
Sbjct: 352 IIRSMPIKTDIVIWKTLLSA 371
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 35/422 (8%)
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
V+ +R N++ +++++GYV+ + NA +F +MP R + W +I+G + E E
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN-EE 74
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
L LFR M P+E+TL V A L ++ G+ +HG IK GL+ D + +LA
Sbjct: 75 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIE----EAELIFYGLRE---- 331
Y + D + V SM V N + ++MG + E L Y + +
Sbjct: 135 MYMRNGKLQDGEIVIRSM------PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 188
Query: 332 -TNPISY--------NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELD 382
N I++ +L I+G E K A + ++++IS+YSK G L
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK----IGASSVVAVVSSLISMYSKCGCLG 244
Query: 383 EAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM-RRLSVDHSRSTFSVLFRA 441
+A K F + + E + V W+SM+S Y +GQ EA++L+ TM + +++ + F L A
Sbjct: 245 DAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
Query: 442 CTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVA 499
C+ +G +L + K F+ + T +VD + G L A+ S+ ++
Sbjct: 304 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 363
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPN-AATFVAILSACSHAGLLNDGLEIFHS 558
W L++ H + +F+ +L + PN +A +V + + + A D E+ S
Sbjct: 364 IWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLANVHASAKRWRDVSEVRKS 421
Query: 559 MQ 560
M+
Sbjct: 422 MR 423
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 356 LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE 415
++ +M KN S N +I+ Y + G+L A K+FD+ +R TWN+M++G I + E
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMP-DRKLTTWNAMIAGLIQFEFNEE 74
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
L L+ M L T +F L S GQ +H + K + ++ V ++L
Sbjct: 75 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
Y + G L D + S+ N+ AW LI G A +G + L++ M + G PN T
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 536 FVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
FV +LS+CS + G +I H+ I + + + ++ + + G L +A + ++
Sbjct: 195 FVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 596 PIEADGVIWGALLNASWF 613
E D V+W ++++A F
Sbjct: 254 EDE-DEVMWSSMISAYGF 270
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 240/476 (50%), Gaps = 12/476 (2%)
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
D ++ C AL G+ VH IK + L FY D ++DA++V + M
Sbjct: 56 DALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP- 114
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKR 355
E + ++I G EA +F + + N ++ ++ +S + K+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 356 LFEKMAPKNLTSL----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNG 411
+ + N S ++++ +Y+K G++ EA ++F+ ER+ V+ ++++GY G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAGYAQLG 233
Query: 412 QHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGT 471
EAL+++ + + + T++ L A + L G+ H H+ + +
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 472 ALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VL 530
+L+D YSKCG+L+ A+R F ++ +W A++ GY+ HGLG E + LFR M + V
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQIC-YRVTPTIEHYTCVVDLLGRSGRLKEAE 589
P+A T +A+LS CSH + + GL IF M Y P EHY C+VD+LGR+GR+ EA
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 590 EFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILG 649
EFI +MP + + G+LL A +++GE +L ++P +VILSN+YA G
Sbjct: 414 EFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473
Query: 650 RWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLT 705
RW +R + + K+PG SWI+ +H F D+TH + + A + ++
Sbjct: 474 RWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEIS 529
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 190/431 (44%), Gaps = 59/431 (13%)
Query: 60 FDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSL 119
F P V IS GR EAL + + ++ + A+L++C +L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLG---PEMGFHGYDALLNACLDKRAL 68
Query: 120 FLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGY 179
G++VH+ ++K+ + + + LL F +C
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKC---------------------------- 100
Query: 180 VQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTL 239
D + +A + +MP ++VV+WT +IS Y++ E AL +F M RS+ PNEFT
Sbjct: 101 ---DCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSE-ALTVFAEMMRSDGKPNEFTF 156
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGG 299
V+ C R L GK +HGL +K D +G +L + Y I +A+ ++E +
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKR 355
++ ++I G +G EEA +F+ L N ++Y ++ + + ++ K+
Sbjct: 217 RDVVS-CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 356 ----LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNG 411
+ + P N++I +YSK G L A +LFD ER +++WN+M+ GY +G
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG 334
Query: 412 QHSEALKLYVTMRRLSVDHSR-STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG 470
E L+L+ MR D R +V A S CS H + T N++ G
Sbjct: 335 LGREVLELFRLMR----DEKRVKPDAVTLLAVLSGCS-------HGRMEDTGL--NIFDG 381
Query: 471 TALVDFYSKCG 481
++ +K G
Sbjct: 382 MVAGEYGTKPG 392
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 191/476 (40%), Gaps = 83/476 (17%)
Query: 27 LRDSEPHHPHVISTNISIAHRAKT------GE---LAEARHMFDEMPLRTVSSWNTMISG 77
LRD + H H+I T A +T G+ L +AR + DEMP + V SW MIS
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 78 YSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKF 137
YSQ G EAL + + M RS K NE +F+ VL+SC R+ L LGKQ+H L++K ++
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 138 GLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV 197
VGS+LL + I EA +FE L + + V + +++GY Q +D
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL-----GLD------- 235
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
E AL++F + + PN T ++ + L L GK
Sbjct: 236 --------------------EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
H ++ L F + +L + Y + A+R++++M
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP------------------- 316
Query: 318 RIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLF-----EKMAPKNLTSLNTMI 372
E IS+N M+ GY+ + LF EK + +L ++
Sbjct: 317 -------------ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 373 SVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN--GQHSEALKLYVTMRRLSVDH 430
S S D + +FD + G I + G+ + + ++R+
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 423
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLAD 485
+ L AC S G+ + L + P A YV L + Y+ G AD
Sbjct: 424 TAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYV--ILSNLYASAGRWAD 477
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
NG+ EAL + M L + + L AC + + GQ +HAH+ KT + Y+
Sbjct: 33 NGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
T L+ FY KC L DA++ + NV +WTA+I+ Y+ G SE++ +F M+
Sbjct: 90 RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
PN TF +L++C A L G +I H + + + I + ++D+ ++G++KEA
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208
Query: 590 EFINQMPIEADGVIWGALL 608
E +P E D V A++
Sbjct: 209 EIFECLP-ERDVVSCTAII 226
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 203/363 (55%), Gaps = 10/363 (2%)
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
Y S + ++R F+ N+ S+ +IS Y K E +EA+ LF + ER+ VTWN++
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF-RAMPERSVVTWNAV 196
Query: 404 MSGYIHNGQHSEALKLYVTM-RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK-T 461
+ G+ G++ EA+ +V M R V + STF A +++ S G+ +HA K
Sbjct: 197 IGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFL 256
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP--NVAAWTALINGYAYHGLGSESIL 519
+ NV+V +L+ FYSKCG++ D+ +F + N+ +W ++I GYA++G G E++
Sbjct: 257 GKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVA 316
Query: 520 LFRSMLVQGVL-PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTI---EHYTCV 575
+F M+ L PN T + +L AC+HAGL+ +G F+ Y P + EHY C+
Sbjct: 317 MFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACM 375
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI 635
VD+L RSGR KEAEE I MP++ W ALL + + + AA K+ LDP +
Sbjct: 376 VDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDV 435
Query: 636 SGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSD 695
S +V+LSN Y+ + W + IR++++ L++ GCSWIE+ + I +F DK + D
Sbjct: 436 SSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKD 495
Query: 696 VIY 698
+Y
Sbjct: 496 EVY 498
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 199/430 (46%), Gaps = 29/430 (6%)
Query: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC--VKLNEISFSAVLSSC 113
A +FDE+P V S +I + + R+ EA +F C ++ NE +F V+ S
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQ--AFKRLLCLGIRPNEFTFGTVIGSS 103
Query: 114 ARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWS 173
S + LGKQ+H LK G VGSA+L V+ + +A F++ RD N V +
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 174 LMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA---RREDGCERALDLFRCMRRS 230
++SGY+++ A+ LF MP R VV W +I G++ R E+ +D+ +R
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM---LREG 220
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD-GLDFDNSIGGALAEFYCDRDAIDD 289
V+PNE T C I + + + AGK +H IK G F+ + +L FY ++D
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 290 AKRVYESMGGEACLNVA-NSLIGGLILMGRIEEAELIFYGL-RETNPISYNLMIKGYAMS 347
+ + + E V+ NS+I G GR EEA +F + ++TN N+ I G +
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 348 SQ----IEKSKRLFEKMA----PKNLTSLN---TMISVYSKNGELDEAVKLFDKTKGERN 396
I++ F K NL L M+ + S++G EA +L +
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 397 SVTWNSMMSG-YIHNGQHSEALKLYVTMRRLSVD-HSRSTFSVLFRACTSLCSFQQGQLL 454
W +++ G IH+ + L + L +D S++ +L A +++ ++Q L+
Sbjct: 401 IGFWKALLGGCQIHSNKR---LAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLI 457
Query: 455 HAHLSKTPFQ 464
+ +T +
Sbjct: 458 RRKMKETGLK 467
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 58/375 (15%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL-ALASF 93
P+V+S I+ K E EA +F MP R+V +WN +I G+SQ GR +EA+
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-VGSALLYFCVRCC 152
+ V NE +F +++ + S GK +H+ +K ++F + V ++L+ F +C
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 153 GIGEAELVFEELRDG--NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY 210
+ ++ L F +L + N V W+ M+ GY A+ +F KM V+D
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKD----------- 324
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
+ + PN T+ V+ C G + G + + D+D
Sbjct: 325 -------------------TNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVN---DYD 362
Query: 271 NSIGGALAEFYCDRDAID------DAKRVYESMGGEACLNVANSLIGGLILMGRIEEAEL 324
+ L + C D + +A+ + +SM + + +L+GG + A+L
Sbjct: 363 DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKL 422
Query: 325 IFYGLRETNP---ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT--------SLNTMIS 373
+ E +P SY ++ Y+ + + KM L + I
Sbjct: 423 AASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIR 482
Query: 374 VY---SKNGELDEAV 385
V+ KN EL + V
Sbjct: 483 VFVNADKNNELKDEV 497
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
A K+FD+ E + ++ +++ ++ +H EA + + + L + + TF + + T
Sbjct: 46 AHKVFDEIP-ELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTA 503
+ + G+ LH + K +NV+VG+A+++ Y K L DA+R F PNV + T
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
LI+GY E++ LFR+M + V+ T+ A++ S G + + F M
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVV----TWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 564 RVTPTIEHYTCVV 576
V P + C +
Sbjct: 221 VVIPNESTFPCAI 233
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 192/347 (55%), Gaps = 4/347 (1%)
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
+++ YS NG ++ A K+FD+ R+ V+WN M+ + H G H++AL +Y M V
Sbjct: 147 SLVRCYSANGSVEIASKVFDEMP-VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC 205
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
T L +C + + G +LH ++ V+V AL+D Y+KCG L +A
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
F + +V W ++I GY HG G E+I FR M+ GV PNA TF+ +L CSH GL+
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
+G+E F M + +TP ++HY C+VDL GR+G+L+ + E I D V+W LL
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 610 ASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKD 669
+ +++E+GE A +KL L+ +V+++++Y+ ++RK ++S +L+
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 670 PGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSIIPFNY 716
PG SWIE+ + +H F V+DK H S VIY+ L IN I Y
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYS---ELGEVINRAILAGY 489
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 181/404 (44%), Gaps = 47/404 (11%)
Query: 14 CKRVEKFR-LFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLR-TVSSW 71
C ++K R + + ++ + HHP + + + + TG L+ A+ +FD + S W
Sbjct: 15 CNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDW 74
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEI-SFSAVLSSCARSGSLFLGKQVHSLLL 130
N +I G+S ++ + M S V ++ +F+ L SC R S+ ++H ++
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVI 134
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMD 190
+SGF +V ++L VRC Y + A
Sbjct: 135 RSGFLDDAIVATSL----VRC---------------------------YSANGSVEIASK 163
Query: 191 LFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLG 250
+F +MPVRD+V+W +I ++ +AL +++ M V + +TL ++ CA +
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLH-NQALSMYKRMGNEGVCGDSYTLVALLSSCAHVS 222
Query: 251 ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
AL+ G ++H + + + AL + Y ++++A V+ M L NS+I
Sbjct: 223 ALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL-TWNSMI 281
Query: 311 GGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-- 363
G + G EA +++ G+R N I++ ++ G + +++ FE M+ +
Sbjct: 282 IGYGVHGHGVEAISFFRKMVASGVRP-NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFH 340
Query: 364 ---NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
N+ M+ +Y + G+L+ ++++ + + V W +++
Sbjct: 341 LTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%), Gaps = 3/234 (1%)
Query: 376 SKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSR-ST 434
S G L A LFD + ++ WN ++ G+ ++ ++ Y M SV T
Sbjct: 50 SVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFT 109
Query: 435 FSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
F+ ++C + S + +H + ++ F + V T+LV YS G + A + F +
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP 169
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLE 554
++ +W +I +++ GL ++++ +++ M +GV ++ T VA+LS+C+H LN G+
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV- 228
Query: 555 IFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ H + R + ++D+ + G L+ A N M + D + W +++
Sbjct: 229 MLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 235/450 (52%), Gaps = 23/450 (5%)
Query: 257 VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILM 316
++H L +K G D L Y I+ A+++++ M E + S+I G M
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMC-EPNVVSWTSVISGYNDM 108
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL-------- 368
G+ + A +F + E P+ N Y +S + L E KN+ +
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPN----EYTFASVFKACSALAESRIGKNIHARLEISGLRR 164
Query: 369 -----NTMISVYSKNGELDEAVKLFDKTKG-ERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
++++ +Y K +++ A ++FD G RN V+W SM++ Y N + EA++L+ +
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 423 MRR-LSVDHSRS-TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
L+ D + + + AC+SL Q G++ H +++ +++N V T+L+D Y+KC
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKC 284
Query: 481 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
G L+ A++ F I +V ++T++I A HGLG ++ LF M+ + PN T + +L
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVL 344
Query: 541 SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEAD 600
ACSH+GL+N+GLE M Y V P HYTCVVD+LGR GR+ EA E + + A+
Sbjct: 345 HACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAE 404
Query: 601 --GVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIR 658
++WGALL+A +E+ A+++L + S ++ LSN YA+ G W ++R
Sbjct: 405 QGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Query: 659 KRLQSLELRKDPGCSWIELNNNIHMFSVED 688
++ K+ CSWIE +++++F D
Sbjct: 465 LEMKRSGNVKERACSWIENKDSVYVFHAGD 494
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 152/345 (44%), Gaps = 69/345 (20%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS-CVKLNEISFS 107
K E+ AR +FDEM V SW ++ISGY+ G+ AL++ MH V NE +F+
Sbjct: 76 KLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFA 135
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+V +C+ +GK +H+ L SG + +V S+L+ +C + A VF+
Sbjct: 136 SVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFD----- 190
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
M+G +G R+VV+WT++I+ YA+ G E A++LFR
Sbjct: 191 ---------------SMIG-----YG----RNVVSWTSMITAYAQNARGHE-AIELFRSF 225
Query: 228 RR--SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
+ N+F L VI C+ LG L GKV HGL + G + + + +L + Y
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAK-- 283
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYA 345
G + AE IF +R + ISY MI A
Sbjct: 284 ------------------------------CGSLSCAEKIFLRIRCHSVISYTSMIMAKA 313
Query: 346 MSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVK 386
E + +LF++M N +L ++ S +G ++E ++
Sbjct: 314 KHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLE 358
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 273/579 (47%), Gaps = 71/579 (12%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
S+ ++ + R G+ +H+ L+ SG + + + L+ F V C + +A VF+E
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDE- 76
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
MP RD+ +I G R + +LD F
Sbjct: 77 ------------------------------MPKRDISGCVVMI-GACARNGYYQESLDFF 105
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
R M + + + F + +++ L GK++H L +K + D I +L + Y
Sbjct: 106 REMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKF 165
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGY 344
+ +A++V+ +G E + + +N MI GY
Sbjct: 166 GEVGNARKVFSDLG--------------------------------EQDLVVFNAMISGY 193
Query: 345 AMSSQIEKSKRLFEKMA----PKNLTSLNTMISVYS--KNGE-LDEAVKLFDKTKGERNS 397
A +SQ +++ L + M ++ + N +IS +S +N E + E ++L + +
Sbjct: 194 ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV 253
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
V+W S++SG +HN Q+ +A + M + + +T L ACT+L + G+ +H +
Sbjct: 254 VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY 313
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
T + + +V +AL+D Y KCG +++A F + ++I YA HGL ++
Sbjct: 314 SVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA 373
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ LF M G + TF AIL+ACSHAGL + G +F MQ YR+ P +EHY C+VD
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVD 433
Query: 578 LLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG 637
LLGR+G+L EA E I M +E D +WGALL A ++E+ AA+ L L+P
Sbjct: 434 LLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGN 493
Query: 638 FVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIE 676
++L+++YA G W ++K ++ R+ G SW+E
Sbjct: 494 GLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 187/435 (42%), Gaps = 57/435 (13%)
Query: 34 HPHVISTNIS----IAHRAKT-----GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRY 84
H H++++ I+ IA + T G++ +AR +FDEMP R +S MI ++ G Y
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYY 98
Query: 85 DEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSAL 144
E+L M++ +KL+ ++L + GK +H L+LK +E + S+L
Sbjct: 99 QESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSL 158
Query: 145 LYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV----RDV 200
+ + +G A VF +L + + V+++ M+SGY A++L M + DV
Sbjct: 159 IDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDV 218
Query: 201 VAWTTLISGYA--RREDGC--------------------------------ERALDLFRC 226
+ W LISG++ R E+ E+A D F+
Sbjct: 219 ITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQ 278
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M + PN T+ ++ C L + GK +HG + GL+ + AL + Y
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGF 338
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIK 342
I +A ++ + + NS+I G ++A +F + T + +++ ++
Sbjct: 339 ISEAMILFRKTPKKTTVTF-NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 343 GYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
+ + + + LF M K L M+ + + G+L EA ++ + E +
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 398 VTWNSMMSGYIHNGQ 412
W ++++ ++G
Sbjct: 458 FVWGALLAACRNHGN 472
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 122/269 (45%), Gaps = 7/269 (2%)
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
F +G++LHAHL + + LV FY +CG + DA++ F + +++ +I
Sbjct: 32 FCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
A +G ES+ FR M G+ +A ++L A S L + ++ H + + +
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYES 150
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN--ASWFWKDIEVGERAAE 625
+ ++D+ + G + A + + + E D V++ A+++ A+ D +
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 626 KLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNN-IHMF 684
KL + P+ I+ ++S + R +K + L L+ K SW + + +H F
Sbjct: 210 KLLGIKPDVITWNALISGFSHM--RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNF 267
Query: 685 SVEDKTHAYSDVIYATVDHLTATINSIIP 713
E A+ ++ + +ATI +++P
Sbjct: 268 QNEKAFDAFKQMLTHGLYPNSATIITLLP 296
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 273/594 (45%), Gaps = 71/594 (11%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L A +F++MP +++ +WN M+S G E + + R L E SF VL
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
+ L + KQ+H K G + V ++L+ +C AE +F++ W
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGS-----W 279
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEV 232
D+V+W +I A+ E+ +AL LF M
Sbjct: 280 --------------------------DIVSWNAIICATAKSENPL-KALKLFVSMPEHGF 312
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKR 292
PN+ T V+ + + + L G+ +HG+ IK+G + +G AL +FY ++D++
Sbjct: 313 SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 293 VYESMGGE--ACLN------------VANSLIGGLILMG-RIEE---------------- 321
++ + + C N + SL ++ MG R E
Sbjct: 373 CFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ 432
Query: 322 ---AELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE-KMAPKNLTSLNTMISVYSK 377
+ ++ G + + + +LM + YA + + + L + P ++ LN + +YS+
Sbjct: 433 QLHSVIVRMGYEDNDYVLSSLM-RSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSR 491
Query: 378 NGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV 437
G+ E+VKL T + ++V+WN ++ + H E ++L+ M + ++ + TF
Sbjct: 492 RGQYHESVKLI-STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVS 550
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQ-ANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+ C+ LC G +H ++KT F A+ +V L+D Y KCG + + F
Sbjct: 551 ILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK 610
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
N+ WTALI+ HG G E++ F+ L G P+ +F++IL+AC H G++ +G+ +F
Sbjct: 611 NLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLF 670
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
M+ Y V P ++HY C VDLL R+G LKEAE I +MP AD +W L+
Sbjct: 671 QKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 185/366 (50%), Gaps = 17/366 (4%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A +F +MP R+ V++ T+I GY++ D ++A +F MR LPN+ T+ ++ CA
Sbjct: 68 AGKVFDQMPERNKVSFNTIIKGYSKYGD-VDKAWGVFSEMRYFGYLPNQSTVSGLLS-CA 125
Query: 248 RLGALHAGKVVHGLCIKDGLDF-DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA 306
L + AG +HGL +K GL D +G L Y D ++ A++V+E M ++ L
Sbjct: 126 SLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS-LETW 183
Query: 307 NSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA 361
N ++ L G ++E EL+ G T S+ ++KG + ++ SK+L
Sbjct: 184 NHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKGVSCVKDLDISKQLHCSAT 242
Query: 362 PKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEAL 417
K L + +N++IS Y K G A ++F + G + V+WN+++ + +AL
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMF-QDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 418 KLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFY 477
KL+V+M ++ T+ + + + G+ +H L K + + +G AL+DFY
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFY 361
Query: 478 SKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFV 537
+KCG+L D++ F I N+ W AL++GYA G + LF ML G P TF
Sbjct: 362 AKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFS 420
Query: 538 AILSAC 543
L +C
Sbjct: 421 TALKSC 426
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 157/658 (23%), Positives = 273/658 (41%), Gaps = 98/658 (14%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF 93
P + NI I+ K GE++ A +FD+MP R S+NT+I GYS++G D+A + S
Sbjct: 47 QPVYVCNNI-ISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG-FEKFGLVGSALLYFCVRCC 152
M N+ + S +LS CA S + G Q+H L LK G F VG+ LL C+
Sbjct: 106 MRYFGYLPNQSTVSGLLS-CA-SLDVRAGTQLHGLSLKYGLFMADAFVGTCLL--CL--- 158
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
Y + D++ A +F MP + + W ++S
Sbjct: 159 --------------------------YGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
R + + FR + R E + V++ + + L K +H K GLD + S
Sbjct: 193 R-GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 273 IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE- 331
+ +L Y A+R+++ G ++ N++I +A +F + E
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVS-WNAIICATAKSENPLKALKLFVSMPEH 310
Query: 332 ---TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN-----LTSLNTMISVYSKNGELDE 383
N +Y + + G + Q+ R M KN + N +I Y+K G L++
Sbjct: 311 GFSPNQGTY-VSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
+ FD + ++N V WN+++SGY N L L++ M ++ + TFS ++C
Sbjct: 370 SRLCFDYIR-DKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALV----------------------------- 474
+ Q LH+ + + ++ N YV ++L+
Sbjct: 428 ----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 475 ---DFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLP 531
YS+ G ++ + +++ P+ +W I + E I LF+ ML + P
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRP 543
Query: 532 NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTC--VVDLLGRSGRLKEAE 589
+ TFV+ILS CS L G I H + I + + C ++D+ G+ G ++
Sbjct: 544 DKYTFVSILSLCSKLCDLTLGSSI-HGL-ITKTDFSCADTFVCNVLIDMYGKCGSIRSVM 601
Query: 590 EFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL-----FSLDPNPISGFVILS 642
+ + E + + W AL++ G+ A EK P+ +S IL+
Sbjct: 602 KVFEETR-EKNLITWTALISCLGIHG---YGQEALEKFKETLSLGFKPDRVSFISILT 655
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 174/385 (45%), Gaps = 27/385 (7%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH- 95
++ N I AK G L ++R FD + + + WN ++SGY+ D + L+ F+
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN---KDGPICLSLFLQM 407
Query: 96 -RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
+ + E +FS L SC + +Q+HS++++ G+E V S+L+ + +
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 155 GEAELVFEELRDGNHVLWSLMLSG-YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
+A L+ + V+ +++G Y +R ++ L + D V+W I+ R
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA-CSR 522
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF---D 270
D E ++LF+ M +S + P+++T ++ +C++L L G +HGL K DF D
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKT--DFSCAD 580
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELI 325
+ L + Y +I +V+E E L +LI L + G +EA E +
Sbjct: 581 TFVCNVLIDMYGKCGSIRSVMKVFEET-REKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 326 FYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM----APKNLTSLNTMISVYSKNGEL 381
G + + +S+ ++ +++ LF+KM + + + ++NG L
Sbjct: 640 SLGFK-PDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYL 698
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSG 406
EA L + ++ W + + G
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFLDG 723
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 10/234 (4%)
Query: 26 LLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYD 85
LL D V+ NI ++ G+ E+ + + SWN I+ S+ ++
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 86 EALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE-KFGLVGSAL 144
E + L M +S ++ ++ +F ++LS C++ L LG +H L+ K+ F V + L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 145 LYFCVRCCGIGEAELVFEELRDGNHVLWSLMLS-----GYVQRDMMGNAMDL-FGKMPVR 198
+ +C I VFEE R+ N + W+ ++S GY Q + L G P
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKP-- 645
Query: 199 DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL 252
D V++ ++++ R + + LF+ M+ V P C + + AR G L
Sbjct: 646 DRVSFISILTA-CRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYL 698
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 438 LFRACTSLCSFQQGQLLHA---HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF 494
L C SF + + LHA L Q VYV ++ Y K G ++ A + F +
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQP-VYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS---HAGLLND 551
N ++ +I GY+ +G ++ +F M G LPN +T +LS S AG
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLH 136
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEA 599
GL + + + + TC++ L GR L+ AE+ MP ++
Sbjct: 137 GLSLKYGLFMADAFVG-----TCLLCLYGRLDLLEMAEQVFEDMPFKS 179
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/634 (25%), Positives = 287/634 (45%), Gaps = 73/634 (11%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM 94
P + N +I K G + +AR +F+EMP R SWN +I+ +Q G DE + M
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGI 154
+R V+ E SF+ VL SC L L +Q+H ++K G+ + ++++ +C +
Sbjct: 154 NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVM 213
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRE 214
+A VF+E+ + + V W++++ Y++ A+ +F KM
Sbjct: 214 SDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM------------------- 254
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
L+L V P T+ V+ C+R AL GKV+H + +K + D +
Sbjct: 255 ------LEL-------NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNP 334
++ + Y D ++ A+RV++ + L S + G + G EA +F + E N
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKD-LKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Query: 335 ISYNLMIKGYA--------------MSSQIEKSKR------------------------- 355
+S+N M+ GY M +IE
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 356 LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE 415
++ N+ N ++ +Y K G L A F + R+ V+WN++++G G+ +
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
AL + M+ + S+ T + L C ++ + G+ +H L + ++ +V + A+VD
Sbjct: 481 ALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
YSKC A F + ++ W ++I G +G E LF + +GV P+ T
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 536 FVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
F+ IL AC G + G + F SM Y ++P +EHY C+++L + G L + EEF+ M
Sbjct: 600 FLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
Query: 596 PIEADGVIWGALLNASWFWKDIEVGERAAEKLFS 629
P + + + +A ++ ++G AA++L +
Sbjct: 660 PFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 169/379 (44%), Gaps = 47/379 (12%)
Query: 14 CKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNT 73
C R+E R R + + S +++ A +G EAR +FD MP R + SWN
Sbjct: 311 CDRLESARRVFDQTRSKD-----LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
M+ GY +DEAL + M + ++ ++ +L+ C+ + +GKQ H + + G
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425
Query: 134 FEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFG 193
++ +V +ALL +C + A + F ++ +
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSE--------------------------- 458
Query: 194 KMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALH 253
+RD V+W L++G AR E+AL F M + E P+++TL ++ CA + AL+
Sbjct: 459 ---LRDEVSWNALLTGVARVGRS-EQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALN 513
Query: 254 AGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGL 313
GK +HG I+DG D I GA+ + Y D A V++ L + NS+I G
Sbjct: 514 LGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD-LILWNSIIRGC 572
Query: 314 ILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----N 364
GR +E +F L + + +++ +++ +E + F M+ K
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQ 632
Query: 365 LTSLNTMISVYSKNGELDE 383
+ + MI +Y K G L +
Sbjct: 633 VEHYDCMIELYCKYGCLHQ 651
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGY------AMSSQIEKSKRLFEKMAP-KNLTSLN 369
G + +A + + E P+SY L + + A+ Q K + +P + LN
Sbjct: 43 GNVSKAVSVLFASPE--PVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLN 100
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
I Y K G +D+A +LF++ ER+ +WN++++ NG E +++ M R V
Sbjct: 101 RAIEAYGKCGCVDDARELFEEMP-ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
+ ++F+ + ++C + + + LH + K + NV + T++VD Y KC ++DA+R
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
F I +P+ +W ++ Y G E++++F ML V P T +++ ACS + L
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQ 594
G ++ H++ + V T V D+ + RL+ A +Q
Sbjct: 280 EVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ 323
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 190/341 (55%), Gaps = 9/341 (2%)
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
T++ YSKNG+L A KLFD+ R+ +WN++++G + + SEA++LY M +
Sbjct: 149 TLLDAYSKNGDLISAYKLFDEMP-VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 430 HSRSTFSVLFRACTSLCSFQQGQ-LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
S T AC+ L ++G+ + H + + NV V A +D YSKCG + A +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 489 SFTSIF-SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
F +V W +I G+A HG ++ +F + G+ P+ +++A L+AC HAG
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 548 LLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGAL 607
L+ GL +F++M C V ++HY CVVDLL R+GRL+EA + I M + D V+W +L
Sbjct: 323 LVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 608 LNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELR 667
L AS + D+E+ E A+ ++ + N FV+LSN+YA GRW +R ++S +++
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 668 KDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATI 708
K PG S+IE IH F DK+H IY +D + I
Sbjct: 442 KIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKI 482
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 18/241 (7%)
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS--------VDH 430
G+L AV++F + WN+++ G+ + S A Y +M + S VD
Sbjct: 51 GDLSFAVQIFRYIPKPLTN-DWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 431 SRSTFSVLFRACT-SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
+F++ +AC +LCS QL H +++ A+ + T L+D YSK G L A +
Sbjct: 110 LTCSFTL--KACARALCSSAMDQL-HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
F + +VA+W ALI G SE++ L++ M +G+ + T VA L ACSH G +
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
+G IFH + +D+ + G + +A + Q + V W ++
Sbjct: 227 KEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMIT 281
Query: 610 A 610
Sbjct: 282 G 282
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 150/372 (40%), Gaps = 58/372 (15%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF--------MHRSCVKLN 102
G+L+ A +F +P + WN +I G++ G +LA + + + +++
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFA--GSSHPSLAFSWYRSMLQQSSSSSAICRVD 108
Query: 103 EISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
++ S L +CAR+ Q+H + + G
Sbjct: 109 ALTCSFTLKACARALCSSAMDQLHCQINRRGLS--------------------------- 141
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALD 222
+ +L + +L Y + + +A LF +MPVRDV +W LI+G E A++
Sbjct: 142 ----ADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASE-AME 196
Query: 223 LFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDNSI-GGALAEF 280
L++ M + +E T + A LGA H G V G I G DN I A +
Sbjct: 197 LYKRMETEGIRRSEVT------VVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDM 250
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPIS 336
Y +D A +V+E G+ + N++I G + G A IF L + + +S
Sbjct: 251 YSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVS 310
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTK 392
Y + + +E +F MA K N+ ++ + S+ G L EA +
Sbjct: 311 YLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMS 370
Query: 393 GERNSVTWNSMM 404
+ V W S++
Sbjct: 371 MIPDPVLWQSLL 382
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+K G+L A +FDEMP+R V+SWN +I+G R EA+ L M ++ +E++
Sbjct: 155 SKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVV 214
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFG-LVGSALLYFCVRCCGIGEAELVFEELRD 166
A L +C+ G + G+ + G+ +V +A + +C + +A VFE+
Sbjct: 215 AALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTG 269
Query: 167 GNHVL-WSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERAL 221
V+ W+ M++G+ A+++F K+ D V++ ++ R E L
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA-CRHAGLVEYGL 328
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC----IKDGLDFDNSIGGAL 277
+F M V N CV+ + +R G L + +C I D + + + +G
Sbjct: 329 SVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDI--ICSMSMIPDPVLWQSLLGA-- 384
Query: 278 AEFYCDRDAIDDAKRVYESMG 298
+E Y D + + A R + MG
Sbjct: 385 SEIYSDVEMAEIASREIKEMG 405
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 147/336 (43%), Gaps = 27/336 (8%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR----------RSEVLPNEF 237
A+ +F +P W +I G+A A +R M R + L F
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHP-SLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 238 TLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM 297
TL + CAR A +H + GL D+ + L + Y + A ++++ M
Sbjct: 115 TL----KACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 298 GGEACLNVA--NSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSS-----QI 350
+VA N+LI GL+ R EA + Y ET I + + A+ + +
Sbjct: 171 ---PVRDVASWNALIAGLVSGNRASEA-MELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 351 EKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN 410
++ + +F + N+ N I +YSK G +D+A ++F++ G+++ VTWN+M++G+ +
Sbjct: 227 KEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 411 GQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG 470
G+ AL+++ + + ++ AC + G + +++ + N+
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY 346
Query: 471 TALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALI 505
+VD S+ G L +A S+ P+ W +L+
Sbjct: 347 GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 168/595 (28%), Positives = 289/595 (48%), Gaps = 23/595 (3%)
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR 165
FS +++ S S L K VH+ LL++GF + G+ L + + A +F+++
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC---ERALD 222
D N + W++ L G + + NA+DLF +MP RDVV+W T+ISG C E +
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV----SCGFHEYGIR 122
Query: 223 LFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD-FDNSIGGALAEFY 281
+F M+R E+ P EFT + + + + G+ +HG I G+ ++ + ++ + Y
Sbjct: 123 VFFDMQRWEIRPTEFTFSILASL---VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMY 179
Query: 282 CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE--TNPISYNL 339
D A V+ +M ++ N LI G E A F+ +RE P Y +
Sbjct: 180 RRLGVFDYALSVFLTMEDRDVVS-WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 340 MIKGYAMSSQIEKSK-----RLFEKMA-PKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
+ S E SK L KM N L I ++SK LD++VKLF + +
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE- 297
Query: 394 ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQL 453
+ +SV NSM+ Y + +AL+L++ SV + TFS + + ++ G
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGAD 356
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
+H+ + K F + V T+L++ Y K G + A F ++ W +I G A +
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR 416
Query: 514 GSESILLFRSMLV-QGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
ES+ +F +L+ Q + P+ T + IL AC +AG +N+G++IF SM+ + V P EHY
Sbjct: 417 AVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHY 476
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDP 632
C+++LL R G + EA++ +++P E IW +L AS D + E A+ + +P
Sbjct: 477 ACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEP 536
Query: 633 NPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVE 687
+++L +Y + RW +R + +L+ G S I + +++ F +
Sbjct: 537 KSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 188/417 (45%), Gaps = 48/417 (11%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
+ I+ N+ + K G L A +FDEMP R V SWNTMISG G ++ + + M
Sbjct: 69 NTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 96 RSCVKLNEISFS--AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
R ++ E +FS A L +C R G+Q+H + SG ++ L
Sbjct: 129 RWEIRPTEFTFSILASLVTCVRH-----GEQIHGNAICSGVSRYNL-------------- 169
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR 213
V+W+ ++ Y + + A+ +F M RDVV+W LI +
Sbjct: 170 ----------------VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDS 213
Query: 214 EDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSI 273
+ E ALD F MR E+ P+E+T+ V+ IC+ L L GK LCIK G ++ +
Sbjct: 214 GNK-EVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV 272
Query: 274 GGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY--GLRE 331
GA + + + +DD+ +++ + + + NS+IG E+A +F +
Sbjct: 273 LGAGIDMFSKCNRLDDSVKLFRELEKWDSV-LCNSMIGSYSWHCCGEDALRLFILAMTQS 331
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNT-----MISVYSKNGELDEAVK 386
P + +M++ + + K L+T ++ +Y K G +D A+
Sbjct: 332 VRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMG 391
Query: 387 LFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY-VTMRRLSVDHSRSTFSVLFRAC 442
+F KT G ++ + WN+++ G N + E+L ++ + S+ R T + AC
Sbjct: 392 VFAKTDG-KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 163/422 (38%), Gaps = 56/422 (13%)
Query: 23 FTTLLRDSEPHHPHVISTNIS----------IAHRAKTGELAEARHMFDEMPLRTVSSWN 72
T +R E H + I + +S + + G A +F M R V SWN
Sbjct: 145 LVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWN 204
Query: 73 TMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKS 132
+I S G + AL M ++ +E + S V+S C+ L GKQ +L +K
Sbjct: 205 CLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKM 264
Query: 133 GFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLF 192
GF +V A + +C + ++ +F EL + VL + M+ Y
Sbjct: 265 GFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY------------- 311
Query: 193 GKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL 252
S + ED AL LF V P++FT V+ + L
Sbjct: 312 ---------------SWHCCGED----ALRLFILAMTQSVRPDKFTFSSVLSSMNAV-ML 351
Query: 253 HAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGG 312
G VH L IK G D D ++ +L E Y ++D A V+ G+ L N++I G
Sbjct: 352 DHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKD-LIFWNTVIMG 410
Query: 313 LILMGRIEEAELIFYGL---RETNPISYNLM--IKGYAMSSQIEKSKRLFEKMA------ 361
L R E+ IF L + P LM + + + + ++F M
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
P N +I + + G ++EA + DK E +S W ++ + G A +
Sbjct: 471 PGN-EHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAK 529
Query: 422 TM 423
TM
Sbjct: 530 TM 531
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 231/466 (49%), Gaps = 12/466 (2%)
Query: 256 KVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLIL 315
K +H + ++ G NS+ L E + A++V++ M + N+L G +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIF-LWNTLFKGYVR 86
Query: 316 MGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL--- 368
E+ L++ +R+ + +Y ++K + L + L
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 369 -NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
++ +Y K GEL A LF+ + ++ V WN+ ++ + G + AL+ + M +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQ-VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
V T + AC L S + G+ ++ K N+ V A +D + KCG+ A+
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
F + NV +W+ +I GYA +G E++ LF +M +G+ PN TF+ +LSACSHAG
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 548 LLNDGLEIFHSMQIC--YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWG 605
L+N+G F M + P EHY C+VDLLGRSG L+EA EFI +MP+E D IWG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 606 ALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLE 665
ALL A +D+ +G++ A+ L P+ S V+LSN+YA G+W +R +++ L
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 666 LRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
+K S +E IH F+ DK+H S IY +D + I +
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKM 491
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 161/366 (43%), Gaps = 46/366 (12%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G++ AR +FDEM + WNT+ GY + E+L L M V+ +E ++ V+
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
+ ++ G G +H+ ++K GF G+V + L+ ++ + AE +FE ++ + V
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRS 230
W+ L+ VQ A++ F KM C A+
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKM---------------------CADAVQF------- 208
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+ FT+ ++ C +LG+L G+ ++ K+ +D + + A + + + A
Sbjct: 209 ----DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY-----GLRETNPISYNLMIKGYA 345
+ ++E M ++ + ++I G + G EA +F GLR N +++ ++ +
Sbjct: 265 RVLFEEMKQRNVVSWS-TMIVGYAMNGDSREALTLFTTMQNEGLR-PNYVTFLGVLSACS 322
Query: 346 MSSQIEKSKRLFEKMAPKNLTSLNT-------MISVYSKNGELDEAVKLFDKTKGERNSV 398
+ + + KR F M N +L M+ + ++G L+EA + K E ++
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 399 TWNSMM 404
W +++
Sbjct: 383 IWGALL 388
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 150/364 (41%), Gaps = 28/364 (7%)
Query: 166 DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFR 225
+ N +L L+ + V DM A +F +M + W TL GY R + E L L++
Sbjct: 41 EKNSLLTQLLENLVVIGDMC-YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLL-LYK 98
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
MR V P+EFT V++ ++LG G +H +K G + L Y
Sbjct: 99 KMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFG 158
Query: 286 AIDDAKRVYESMGGE----------ACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI 335
+ A+ ++ESM + C+ NS I +E + + +
Sbjct: 159 ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA-------LEYFNKMCADAVQFDSF 211
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKT 391
+ M+ +E + ++++ + N+ N + ++ K G + A LF++
Sbjct: 212 TVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEM 271
Query: 392 KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
K +RN V+W++M+ GY NG EAL L+ TM+ + + TF + AC+ +G
Sbjct: 272 K-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG 330
Query: 452 QL---LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALING 507
+ L + + +VD + G L +A + P+ W AL+
Sbjct: 331 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Query: 508 YAYH 511
A H
Sbjct: 391 CAVH 394
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 152/347 (43%), Gaps = 48/347 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
+++T + + + K GEL+ A +F+ M ++ + +WN ++ Q G AL + M
Sbjct: 145 IVATELVMMY-MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
V+ + + ++LS+C + GSL +G++++ K + +V +A L ++C
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A ++FEE++ N V WS M+ GY M G++ +
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYA---MNGDSRE-------------------------- 294
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
AL LF M+ + PN T V+ C+ G ++ GK L ++ D ++
Sbjct: 295 ---ALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN---DKNLEPR 348
Query: 277 LAEFYCDRD------AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR 330
+ C D +++A + M E + +L+G + + + + L
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLV 408
Query: 331 ETNPI--SYNLMIKG-YAMSSQ---IEKSKRLFEKMAPKNLTSLNTM 371
ET P SY++++ YA + + ++K + K+ K + + +++
Sbjct: 409 ETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
++I N + K G AR +F+EM R V SW+TMI GY+ G EAL L + M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKS 132
++ N ++F VLS+C+ +G + GK+ SL+++S
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
++ S L RA +S +Q + +HA + +T F + T L++ G + A++ F
Sbjct: 9 TKQMLSELLRASSS--KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVF 66
Query: 491 TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLN 550
+ P + W L GY + L ES+LL++ M GV P+ T+ ++ A S G +
Sbjct: 67 DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS 126
Query: 551 DGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
G + H+ + Y T +V + + G L AE M ++ D V W A L
Sbjct: 127 CGFAL-HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFL 182
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 267/555 (48%), Gaps = 54/555 (9%)
Query: 196 PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
P +V + T+IS + ++ C L+ M R V P+ T +++ + L +
Sbjct: 96 PNPNVFVYNTMISAVSSSKNEC---FGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV--- 149
Query: 256 KVVHGLCIKDG-LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLI 314
K +H I G L N + +L +FY + A++V+ M ++ N +I G
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP-HPDVSSFNVMIVGYA 208
Query: 315 LMGRIEEAELIFYGL-----------------------------------------RETN 333
G EA +++ + +N
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
I N ++ Y + +KR F+ M K++ S NTM+ + + G+++ A +FD+
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP- 327
Query: 394 ERNSVTWNSMMSGYIHNGQHSEALK-LYVTMRRL-SVDHSRSTFSVLFRACTSLCSFQQG 451
+R+ V+WNS++ GY G ++ L+ M + V R T L + G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 452 QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYH 511
+ +H + + + + ++ +AL+D Y KCG + A F + +VA WT++I G A+H
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFH 447
Query: 512 GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH 571
G G +++ LF M +GV PN T +A+L+ACSH+GL+ +GL +F+ M+ + P EH
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH 507
Query: 572 YTCVVDLLGRSGRLKEAEEFIN-QMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSL 630
Y +VDLL R+GR++EA++ + +MP+ +WG++L+A +DIE E A +L L
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKL 567
Query: 631 DPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMF-SVEDK 689
+P G+V+LSN+YA +GRWG R+ +++ ++K G S + +H F + E +
Sbjct: 568 EPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQ 627
Query: 690 THAYSDVIYATVDHL 704
H I + HL
Sbjct: 628 NHPRWTEIKRILQHL 642
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 200/424 (47%), Gaps = 29/424 (6%)
Query: 24 TTLLRDSEPHHPHVIST----------NISIAHRAKTGELAEARHMFDEMPLRTVSSWNT 73
++ L + + H H+I + N + + G A +F MP VSS+N
Sbjct: 143 SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
MI GY++ G EAL L M ++ +E + ++L C + LGK VH + + G
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG 262
Query: 134 --FEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
+ ++ +ALL +C G A+ F+ ++ + W+ M+ G+V+ M A +
Sbjct: 263 PVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 192 FGKMPVRDVVAWTTLISGYARREDGCER--ALDLFRCMRRSE-VLPNEFTLDCVIRICAR 248
F +MP RD+V+W +L+ GY+++ GC++ +LF M E V P+ T+ +I A
Sbjct: 323 FDQMPKRDLVSWNSLLFGYSKK--GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANS 308
G L G+ VHGL I+ L D + AL + YC I+ A V+++ E + + S
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTS 439
Query: 309 LIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK- 363
+I GL G ++A +F ++E N ++ ++ + S +E+ +F M K
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKF 499
Query: 364 ----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT-WNSMMSGYIHNGQHSEALK 418
+++ + + G ++EA + K R S + W S++S G+ E +
Sbjct: 500 GFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA-CRGGEDIETAE 558
Query: 419 LYVT 422
L +T
Sbjct: 559 LALT 562
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 230/552 (41%), Gaps = 88/552 (15%)
Query: 2 ILFLRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFD 61
++ L C RN K+V + L+ D+ P + + I+ +L +
Sbjct: 38 LVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLL----FLN 93
Query: 62 EMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFL 121
P V +NTMIS S +E L S M R V + +F ++ + S L
Sbjct: 94 FTPNPNVFVYNTMISAVSS--SKNECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFLSE 148
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
KQ+H ++ SG C +G + LW+ ++ Y++
Sbjct: 149 VKQIHCHIIVSG-----------------CLSLG-------------NYLWNSLVKFYME 178
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
G A +F +MP DV ++ +I GYA++ E AL L+ M + P+E+T+
Sbjct: 179 LGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE-ALKLYFKMVSDGIEPDEYTVLS 237
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNS--IGGALAEFYCDRDAIDDAKRVYESMGG 299
++ C L + GK VHG + G + ++ + AL + Y AKR +++M
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKR---- 355
+ + N+++ G + +G +E A+ +F + + + +S+N ++ GY+ +++ R
Sbjct: 298 KD-MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFY 356
Query: 356 ---LFEKMAPKNLTSL----------------------------------NTMISVYSKN 378
+ EK+ P +T + + +I +Y K
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 379 GELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL 438
G ++ A +F KT E++ W SM++G +G +AL+L+ M+ V + T +
Sbjct: 417 GIIERAFMVF-KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 439 FRACTSLCSFQQGQLLHAHLS-KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS-- 495
AC+ ++G + H+ K F +LVD + G + +A+
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 496 PNVAAWTALING 507
P+ + W ++++
Sbjct: 536 PSQSMWGSILSA 547
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
Y +N LD A LF N +N+M+S + +E LY +M R V R
Sbjct: 79 TYPEN--LDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQ 134
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTP-FQANVYVGTALVDFYSKCGHLADAQRSFTS 492
TF L +A + L +Q +H H+ + Y+ +LV FY + G+ A++ F
Sbjct: 135 TFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFAR 191
Query: 493 IFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
+ P+V+++ +I GYA G E++ L+ M+ G+ P+ T +++L C H
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 259/515 (50%), Gaps = 18/515 (3%)
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
A +F ++P R V + ++I Y+R ++ E L L+ M ++ P+ T I+ C
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDE-VLRLYDQMIAEKIQPDSSTFTMTIKACL 127
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
L G+ V + G D + ++ Y +D+A+ ++ M +
Sbjct: 128 SGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI-CWT 186
Query: 308 SLIGGLILMGRIEEAELIFYGLRETNPISYN----LMIKGYAMSSQIEKSKR-------L 356
+++ G G+ +A + FY RE + +M+ S + +K L
Sbjct: 187 TMVTGFAQAGKSLKA-VEFY--REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 357 FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEA 416
+ P N+ +++ +Y+K G ++ A ++F + + +V+W S++SG+ NG ++A
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMF-KTAVSWGSLISGFAQNGLANKA 302
Query: 417 LKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
+ V M+ L T + AC+ + S + G+L+H ++ K V TAL+D
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDM 361
Query: 477 YSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
YSKCG L+ ++ F + ++ W +I+ Y HG G E + LF M + P+ ATF
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATF 421
Query: 537 VAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
++LSA SH+GL+ G F M Y++ P+ +HY C++DLL R+GR++EA + IN
Sbjct: 422 ASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEK 481
Query: 597 IEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTT 656
++ IW ALL+ +++ VG+ AA K+ L+P+ I ++SN +A +W +
Sbjct: 482 LDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAK 541
Query: 657 IRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTH 691
+RK +++ + K PG S IE+N + F +ED +H
Sbjct: 542 VRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/536 (23%), Positives = 233/536 (43%), Gaps = 62/536 (11%)
Query: 1 MILFLRFCPVRN---CCKRVEKFRLFTTLLRDSEPHHPHVIST-------NIS---IAHR 47
M+ FC + C KR++ + + L R H VIST +IS IA
Sbjct: 1 MVQTKHFCMLHRTLLCPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASC 60
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+ GE++ AR +FDE+P R VS +N+MI YS+ DE L L M ++ + +F+
Sbjct: 61 GRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT 120
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+ +C L G+ V + G++ V S++L ++C + EAE++F ++
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ + W+ M++G+ Q G ++ +A++ +R M
Sbjct: 181 DVICWTTMVTGFAQ---AGKSL-----------------------------KAVEFYREM 208
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+ + + +++ LG G+ VHG + GL + + +L + Y I
Sbjct: 209 QNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 288 DDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN----LMIKG 343
+ A RV+ M + ++ SLI G G +A F + E + + ++
Sbjct: 269 EVASRVFSRMMFKTAVSWG-SLISGFAQNGLANKA---FEAVVEMQSLGFQPDLVTLVGV 324
Query: 344 YAMSSQIE--KSKRLFE----KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
SQ+ K+ RL K + + ++ +YSK G L + ++F+ G ++
Sbjct: 325 LVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHV-GRKDL 383
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQ-LLHA 456
V WN+M+S Y +G E + L++ M +++ +TF+ L A + +QGQ
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSV 443
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN-VAAWTALINGYAYH 511
++K Q + L+D ++ G + +A S N + W AL++G H
Sbjct: 444 MINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 246/502 (49%), Gaps = 37/502 (7%)
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
Y D + +A +F +MP DV++W +L+SGY + + + LF + RS+V PNEF+
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQ-SGRFQEGICLFLELHRSDVFPNEFS 158
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+ CARL G +H +K GL+ N +
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVV------------------------- 193
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
V N LI G +++A L+F + E + +S+N ++ + + ++E F
Sbjct: 194 ------VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFH 247
Query: 359 KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALK 418
+M + + N +I + K+G+ + A ++ NS +WN++++GY+++ + EA +
Sbjct: 248 QMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP-NSSSWNTILTGYVNSEKSGEATE 306
Query: 419 LYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYS 478
+ M V + S++ A +L G L+HA K + V V +AL+D YS
Sbjct: 307 FFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYS 366
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL-PNAATFV 537
KCG L A+ F ++ N+ W +I+GYA +G E+I LF + + L P+ TF+
Sbjct: 367 KCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFL 426
Query: 538 AILSACSHAGLLNDGLEIFHSMQIC-YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
+L+ CSH + + + + M I YR+ P++EH ++ +G+ G + +A++ I +
Sbjct: 427 NLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFG 486
Query: 597 IEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISG--FVILSNMYAILGRWGQK 654
DGV W ALL A KD++ + A K+ L ++++SN+YA RW +
Sbjct: 487 FGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREV 546
Query: 655 TTIRKRLQSLELRKDPGCSWIE 676
IRK ++ + K+ G SWI+
Sbjct: 547 GQIRKIMRESGVLKEVGSSWID 568
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 161/378 (42%), Gaps = 96/378 (25%)
Query: 50 TGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAV 109
+ L +A +FDEMP V SWN+++SGY Q GR+ E + L +HRS V NE SF+A
Sbjct: 103 SDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAA 162
Query: 110 LSSCARSGSLFLGKQVHSLLLKSGFEKFG-LVGSALLYFCVRCCGIGEAELVFEELRDGN 168
L++CAR LG +HS L+K G EK +VG+ L+ +C + +A LVF+ + + +
Sbjct: 163 LAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222
Query: 169 HVLWSL-------------------------------MLSGYVQRDMMGNAMDLFGKMPV 197
V W+ ++ +V+ NA + MP
Sbjct: 223 TVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
+ +W T+++GY E E A + F M S V +E++L V+ A L + G +
Sbjct: 283 PNSSSWNTILTGYVNSEKSGE-ATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
+H K GLD + AL + Y C G
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMY------------------SKC--------------G 369
Query: 318 RIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSK 377
++ AEL+F+ + N I +N MI GYA +
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYA-------------------------------R 398
Query: 378 NGELDEAVKLFDKTKGER 395
NG+ EA+KLF++ K ER
Sbjct: 399 NGDSIEAIKLFNQLKQER 416
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 18/317 (5%)
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRI----EEAELIFYGLR-ETNPISYNLMI 341
+ +A +G A N ++++ L G I ELI G + + +P+ + L +
Sbjct: 5 VSNAFTTRSHVGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRV 64
Query: 342 KG-YAMSSQIEKSKRLFEKMAPKNLTSL-NTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
G Y S + K + T L N+++ Y + L++A K+FD+ + + ++
Sbjct: 65 SGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP-DPDVIS 123
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
WNS++SGY+ +G+ E + L++ + R V + +F+ AC L G +H+ L
Sbjct: 124 WNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV 183
Query: 460 KTPFQ-ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
K + NV VG L+D Y KCG + DA F + + +W A++ + +G +
Sbjct: 184 KLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGL 243
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
F M P+ T+ ++ A +G N+ ++ M P + ++
Sbjct: 244 WFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP-----NPNSSSWNTILTG 294
Query: 579 LGRSGRLKEAEEFINQM 595
S + EA EF +M
Sbjct: 295 YVNSEKSGEATEFFTKM 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
LH +++K F +N + +L+ FY L DA + F + P+V +W +L++GY G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 514 GSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYT 573
E I LF + V PN +F A L+AC+ L G I + +
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 574 CVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPN 633
C++D+ G+ G + +A M E D V W A++ + +E+G F PN
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLW----FFHQMPN 251
Query: 634 P 634
P
Sbjct: 252 P 252
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF 93
+P ++ N I K+G+ A + +MP SSWNT+++GY + EA +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 94 MHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG 153
MH S V+ +E S S VL++ A + G +H+ K G + +V SAL+ +C
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 154 IGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
+ AEL+F + N ++W+ M+SGY + A+ LF ++
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 231/427 (54%), Gaps = 10/427 (2%)
Query: 290 AKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN--PISYNL--MIKGYA 345
A+ ++E+M E + + NS+ G E +F + E P +Y ++K A
Sbjct: 82 ARHLFEAMS-EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 346 MSSQIEKSKRL----FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
++ +E+ ++L + N+ T+I++Y++ ++D A +FD+ E V +N
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV-EPCVVCYN 199
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
+M++GY + +EAL L+ M+ + + T + +C L S G+ +H + K
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLF 521
F V V TAL+D ++KCG L DA F + + AW+A+I YA HG +S+L+F
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 522 RSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGR 581
M + V P+ TF+ +L+ACSH G + +G + F M + + P+I+HY +VDLL R
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 582 SGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVIL 641
+G L++A EFI+++PI ++W LL A ++++ E+ +E++F LD + +VIL
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVIL 439
Query: 642 SNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATV 701
SN+YA +W ++RK ++ + K PGCS IE+NN +H F D + + ++ +
Sbjct: 440 SNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRAL 499
Query: 702 DHLTATI 708
D + +
Sbjct: 500 DEMVKEL 506
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 164/363 (45%), Gaps = 42/363 (11%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
++ ARH+F+ M + +N+M GYS++ E +L + + + +F ++L +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
CA + +L G+Q+H L +K G + V L+ C + A VF+ + +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE------ 192
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEV 232
P VV + +I+GYARR E AL LFR M+ +
Sbjct: 193 -----------------------PC--VVCYNAMITGYARRNRPNE-ALSLFREMQGKYL 226
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKR 292
PNE TL V+ CA LG+L GK +H K + AL + + ++DDA
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 293 VYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN----PISYNLMIKGYAMSS 348
++E M + +++I G+ E++ L+F +R N I++ ++ + +
Sbjct: 287 IFEKMRYKDT-QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 349 QIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
++E+ ++ F +M K ++ +M+ + S+ G L++A + DK + W +
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 404 MSG 406
++
Sbjct: 406 LAA 408
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 52 ELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLS 111
++ AR +FD + V +N MI+GY++ R +EAL+L M +K NEI+ +VLS
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 238
Query: 112 SCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVL 171
SCA GSL LGK +H K F K+ V +AL+ +C + +A +FE++R +
Sbjct: 239 SCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA 298
Query: 172 WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE 231
WS M+ Y G A E+++ +F MR
Sbjct: 299 WSAMIVAYANH---GKA-----------------------------EKSMLMFERMRSEN 326
Query: 232 VLPNEFTLDCVIRICARLGALHAGK 256
V P+E T ++ C+ G + G+
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGR 351
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK G L +A +F++M + +W+ MI Y+ G+ ++++ + M V+ +EI+F
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFL 335
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY 146
+L++C+ +G + G++ S ++ KFG+V S Y
Sbjct: 336 GLLNACSHTGRVEEGRKYFSQMV----SKFGIVPSIKHY 370
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 245/483 (50%), Gaps = 11/483 (2%)
Query: 202 AWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
++ TL+S YA D + ++ + P+ FT V + C + + GK +HG+
Sbjct: 73 SYNTLLSSYAVC-DKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 262 CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE 321
K G D + +L FY +A +V+ M ++ +I G G +E
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVS-WTGIITGFTRTGLYKE 190
Query: 322 AELIFYGLR-ETNPISYNLMIKGYAMSSQIEKSK----RLFEKMAPKNLTSLNTMISVYS 376
A F + E N +Y ++ + K + ++ + +L + N +I +Y
Sbjct: 191 ALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS-VDHSRSTF 435
K +L +A+++F + + +++ V+WNSM+SG +H + EA+ L+ M+ S +
Sbjct: 251 KCEQLSDAMRVFGELE-KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 436 SVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS 495
+ + AC SL + G+ +H ++ + + ++GTA+VD Y+KCG++ A F I S
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
NV W AL+ G A HG G ES+ F M+ G PN TF+A L+AC H GL+++G
Sbjct: 370 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRY 429
Query: 556 FHSMQIC-YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFW 614
FH M+ Y + P +EHY C++DLL R+G L EA E + MP++ D I GA+L+A
Sbjct: 430 FHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNR 489
Query: 615 KDI-EVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
+ E+ + + ++ +V+LSN++A RW IR+ ++ + K PG S
Sbjct: 490 GTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSS 549
Query: 674 WIE 676
+IE
Sbjct: 550 YIE 552
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 55/352 (15%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
GE A +F EMP+R V SW +I+G+++ G Y EAL S M V+ N ++ VL
Sbjct: 155 GESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVL 211
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
S R G L LGK +H L+LK G+AL+ V+C + +A VF EL + V
Sbjct: 212 VSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKV 271
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER---ALDLFRCM 227
W+ M+SG V CER A+DLF M
Sbjct: 272 SWNSMISGLVH-----------------------------------CERSKEAIDLFSLM 296
Query: 228 RRSE-VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
+ S + P+ L V+ CA LGA+ G+ VH + G+ +D IG A+ + Y
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGY 356
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMI 341
I+ A ++ + + N+L+GGL + G E+ E++ G + N +++ +
Sbjct: 357 IETALEIFNGIRSKNVFT-WNALLGGLAIHGHGLESLRYFEEMVKLGFKP-NLVTFLAAL 414
Query: 342 KGYAMSSQIEKSKRLFEKMAPK------NLTSLNTMISVYSKNGELDEAVKL 387
+ +++ +R F KM + L MI + + G LDEA++L
Sbjct: 415 NACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALEL 466
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 217/489 (44%), Gaps = 78/489 (15%)
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
S+NT++S Y+ + + + + +F V +C + + GKQ+H ++
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 130 LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAM 189
K GF V ++L++F C GE+ NA
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVC---GESR----------------------------NAC 161
Query: 190 DLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARL 249
+FG+MPVRDVV+WT +I+G+ R + ALD F M +V PN T CV+ R+
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFT-RTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRV 217
Query: 250 GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL 309
G L GK +HGL +K G AL + Y + + DA RV+ + + ++ NS+
Sbjct: 218 GCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVS-WNSM 276
Query: 310 IGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSS-----QIEKSKRLFEKMAPKN 364
I GL+ R +EA +F ++ ++ I + I +S+ ++ + + E +
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 365 L---TSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
+ T + T ++ +Y+K G ++ A+++F+ + +N TWN+++ G +G E+L+ +
Sbjct: 337 IKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
M +L + TF AC T LVD +
Sbjct: 396 EEMVKLGFKPNLVTFLAALNACCH--------------------------TGLVDEGRRY 429
Query: 481 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
H ++ ++F P + + +I+ GL E++ L ++M V+ P+ AIL
Sbjct: 430 FHKMKSRE--YNLF-PKLEHYGCMIDLLCRAGLLDEALELVKAMPVK---PDVRICGAIL 483
Query: 541 SACSHAGLL 549
SAC + G L
Sbjct: 484 SACKNRGTL 492
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 33/217 (15%)
Query: 41 NISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSC-V 99
N I K +L++A +F E+ + SWN+MISG R EA+ L S M S +
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAEL 159
K + ++VLS+CA G++ G+ VH +L +G + +G+A++ +C
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKC-------- 354
Query: 160 VFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER 219
GY++ A+++F + ++V W L+ G A G E
Sbjct: 355 ------------------GYIE-----TALEIFNGIRSKNVFTWNALLGGLAIHGHGLE- 390
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
+L F M + PN T + C G + G+
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGR 427
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 263/564 (46%), Gaps = 48/564 (8%)
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
++H ++K+G +K S LL F I A +FE + + N +++ M+ GY
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFS-SVLDIRYASSIFEHVSNTNLFMFNTMIRGY---- 100
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
D ERA +F +R + + F+ +
Sbjct: 101 ----------------------------SISDEPERAFSVFNQLRAKGLTLDRFSFITTL 132
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
+ C+R + G+ +HG+ ++ G + AL FYC I DA++V++ M
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 304 NVANSLIGGLILMGRIEEAELIFYGLRETNPI-------SYNLMIKGYAMSSQIEKSKRL 356
++L+ G + + + A +F +R++ + S+ I S E + L
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVL 252
Query: 357 FEKMAPK-NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE 415
K+ +L + +I +Y K G + A ++FD ++ VTWN M+ Y G E
Sbjct: 253 CIKIGLDLDLHLITALIGMYGKTGGISSARRIFD-CAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
+ L M+ + + STF L +C + G+ + L + + +GTALVD
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVD 371
Query: 476 FYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG--VLPNA 533
Y+K G L A F + +V +WTA+I+GY HGL E++ LF M + V PN
Sbjct: 372 MYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNE 431
Query: 534 ATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFIN 593
TF+ +L+ACSH GL+ +G+ F M Y TP +EHY CVVDLLGR+G+L+EA E I
Sbjct: 432 ITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIR 491
Query: 594 QMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQ 653
+PI +D W ALL A + + ++GE +L + + ++L+ +A+ G
Sbjct: 492 NLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG--NP 549
Query: 654 KTTIRKRLQSLELRKDPGCSWIEL 677
+ ++ L + RK+ G S IE+
Sbjct: 550 EKSLDNELN--KGRKEAGYSAIEI 571
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 230/516 (44%), Gaps = 50/516 (9%)
Query: 10 VRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS 69
+R+C VE R+ +++ +S ++ + ++ A +F+ + +
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFS---SVLDIRYASSIFEHVSNTNLF 91
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
+NTMI GYS + A ++ + + + L+ SF L SC+R + +G+ +H +
Sbjct: 92 MFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIA 151
Query: 130 LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL-RDGNHVLWSLMLSGYVQRDMMGNA 188
L+SGF F + +AL++F C I +A VF+E+ + + V +S +++GY+Q A
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 189 MDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
+D LFR MR+SEV+ N TL + +
Sbjct: 212 LD--------------------------------LFRIMRKSEVVVNVSTLLSFLSAISD 239
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANS 308
LG L + H LCIK GLD D + AL Y I A+R+++ + + N
Sbjct: 240 LGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT-WNC 298
Query: 309 LIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN 364
+I G +EE + ++ + N ++ ++ A S + + + + +
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 365 L---TSLNT-MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLY 420
+ L T ++ +Y+K G L++AV++F++ K +++ +W +M+SGY +G EA+ L+
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAVTLF 417
Query: 421 VTMRR--LSVDHSRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFY 477
M V + TF V+ AC+ +G + + F V +VD
Sbjct: 418 NKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLL 477
Query: 478 SKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
+ G L +A ++ + + AW AL+ +G
Sbjct: 478 GRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYG 513
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 181/323 (56%), Gaps = 11/323 (3%)
Query: 370 TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
+++ YS G++D A ++FD+T ++N V W +M+S Y N EA++L+ M ++
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 430 HSRSTFSVLFRACTSLCSFQQGQLLHAH--LSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+V AC L + Q G+ +++ K ++ + +L++ Y K G A+
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 488 RSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG------VLPNAATFVAILS 541
+ F +V +T++I GYA +G ES+ LF+ M + PN TF+ +L
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG 601
ACSH+GL+ +G F SM + Y + P H+ C+VDL RSG LK+A EFINQMPI+ +
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRL 661
VIW LL A ++E+GE ++F LD + + +V LSN+YA G W +K+ +R R+
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
Query: 662 QSLELRKDPGCSWIELNNNIHMF 684
+ R+ PG SWIEL + I+ F
Sbjct: 405 RK---RRMPGKSWIELGSIINEF 424
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 33/323 (10%)
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRIC-ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
LD R+S + F++ I++ A+ + G+ +H L K G + I +L
Sbjct: 49 LDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVG 108
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGG----------LILMGRIEEAELIFYGL 329
FY +D A++V++ + + + ++I + L R+E ++ G+
Sbjct: 109 FYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGV 168
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
T +S + M +I ++ +LT N+++++Y K+GE ++A KLFD
Sbjct: 169 IVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFD 228
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS--------TFSVLFRA 441
++ ++ T+ SM+ GY NGQ E+L+L+ M+ ++D S+ TF + A
Sbjct: 229 ESM-RKDVTTYTSMIFGYALNGQAQESLELFKKMK--TIDQSQDTVITPNDVTFIGVLMA 285
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTA----LVDFYSKCGHLADAQRSFTSI-FSP 496
C+ ++G+ H N+ A +VD + + GHL DA + P
Sbjct: 286 CSHSGLVEEGK---RHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 497 NVAAWTALINGYAYHG---LGSE 516
N W L+ + HG LG E
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEE 365
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 174/438 (39%), Gaps = 98/438 (22%)
Query: 89 ALASFMHR-----SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSA 143
AL F HR S V + F+ +SS ++ SL G+Q+H+L+ K GF + ++
Sbjct: 47 ALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTS 105
Query: 144 LLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAW 203
L+ F + A VF+E + +++V W
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEK------------------------------QNIVLW 135
Query: 204 TTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
T +IS Y E+ E A++LF+ M ++ + + + CA LGA+ G+ ++ I
Sbjct: 136 TAMISAYTENENSVE-AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSI 194
Query: 264 KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAE 323
K R A+D L + NSL+ + G E+A
Sbjct: 195 KRK----------------RRLAMD--------------LTLRNSLLNMYVKSGETEKAR 224
Query: 324 LIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDE 383
+F + +Y MI GYA++ Q ++S LF+KM + S +T+I+
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID-QSQDTVITP--------- 274
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
N VT+ ++ H+G E + + +M +D++ F C
Sbjct: 275 ------------NDVTFIGVLMACSHSGLVEEGKRHFKSM---IMDYNLKPREAHF-GCM 318
Query: 444 SLCSFQQGQLLHAH--LSKTPFQANVYVGTALVDFYSKCGHL---ADAQRSFTSIFSPNV 498
+ G L AH +++ P + N + L+ S G++ + QR + +V
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Query: 499 AAWTALINGYAYHGLGSE 516
+ AL N YA G+ E
Sbjct: 379 GDYVALSNIYASKGMWDE 396
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 160/397 (40%), Gaps = 80/397 (20%)
Query: 48 AKTGELAEARHMFDEMPLR-TVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISF 106
+ G++ AR +FDE P + + W MIS Y++ EA+ L M ++L+ +
Sbjct: 111 SSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIV 170
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
+ LS+CA G++ +G++++S +K + +
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRK-RRLAM--------------------------- 202
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
+ L + +L+ YV+ A LF + +DV +T++I GYA E +L+LF+
Sbjct: 203 -DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQE-SLELFKK 260
Query: 227 MRRSE------VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD-GLDFDNSIGGALAE 279
M+ + + PN+ T V+ C+ G + GK I D L + G + +
Sbjct: 261 MKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVD 320
Query: 280 FYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNL 339
+C + DA M + + +L+G L G +E E
Sbjct: 321 LFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGE---------------- 364
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER-NSV 398
E +R+FE + ++ + ++Y+ G DE K+ D+ + R
Sbjct: 365 -----------EVQRRIFE-LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGK 412
Query: 399 TW-------NSMMSGYIHN------GQHSEALKLYVT 422
+W N +SG +N G+ SE L+ V+
Sbjct: 413 SWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCLVS 449
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 191/336 (56%), Gaps = 2/336 (0%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
++++ +Y+K GE+ A K+FD+ +RN VTW+ MM GY G++ EAL L+ ++
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
+ +FS + C + + G+ +H K+ F ++ +VG++LV YSKCG A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + N+ W A++ YA H + I LF+ M + G+ PN TF+ +L+ACSHAGL
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+++G F M+ R+ PT +HY +VD+LGR+GRL+EA E I MPI+ +WGALL
Sbjct: 334 VDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
+ K+ E+ AA+K+F L P + LSN YA GR+ RK L+ +K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 669 DPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
+ G SW+E N +H F+ ++ H S IY + L
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 440 RACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVA 499
++C L G+ +H KT + A+V+VG++LVD Y+KCG + A++ F + NV
Sbjct: 124 KSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVV 183
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
W+ ++ GYA G E++ LF+ L + + N +F +++S C+++ LL G +I H +
Sbjct: 184 TWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI-HGL 242
Query: 560 QICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA----SWFWK 615
I + + +V L + G + A + N++P++ G IW A+L A S K
Sbjct: 243 SIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG-IWNAMLKAYAQHSHTQK 301
Query: 616 DIEVGERAAEKLFSLDPNPISGFVILS 642
IE+ +R KL + PN I+ +L+
Sbjct: 302 VIELFKRM--KLSGMKPNFITFLNVLN 326
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 145/329 (44%), Gaps = 40/329 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
AK GE+ AR MFDEMP R V +W+ M+ GY+Q G +EAL L + +N+ SFS
Sbjct: 162 AKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFS 221
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE-AELVFEELRD 166
+V+S CA S L LG+Q+H L +KS F+ VGS+L+ + CG+ E A VF E+
Sbjct: 222 SVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSK-CGVPEGAYQVFNEVPV 280
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N +W+ ML Y Q ++ ++LF+
Sbjct: 281 KNLGIWNAMLKAYAQHSHT--------------------------------QKVIELFKR 308
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M+ S + PN T V+ C+ G + G+ + ++ + +L +
Sbjct: 309 MKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGR 368
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI---KG 343
+ +A V +M + +V +L+ + E A + E P+S + I
Sbjct: 369 LQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNA 428
Query: 344 YAMSSQIE---KSKRLFEKMAPKNLTSLN 369
YA + E K+++L K T L+
Sbjct: 429 YAADGRFEDAAKARKLLRDRGEKKETGLS 457
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 181/424 (42%), Gaps = 47/424 (11%)
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
C N+I +L S AR+ S G Q+H ++KSG LV + L+ F ++
Sbjct: 12 CHNYNQIC--DLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINF------YSKS 63
Query: 158 ELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC 217
+L F+ R F P + W+++IS +A+ E
Sbjct: 64 QLPFDSRR-------------------------AFEDSPQKSSTTWSSIISCFAQNELPW 98
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
+L+ + M + P++ L + CA L G+ VH L +K G D D +G +L
Sbjct: 99 -MSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSL 157
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRET 332
+ Y I A+++++ M + + ++ G MG EEA E +F L
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPQRNVVTWS-GMMYGYAQMGENEEALWLFKEALFENL-AV 215
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLF----EKMAPKNLTSLNTMISVYSKNGELDEAVKLF 388
N S++ +I A S+ +E +++ + + ++++S+YSK G + A ++F
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
++ +N WN+M+ Y + + ++L+ M+ + + TF + AC+
Sbjct: 276 NEVP-VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALING 507
+G+ + ++ + +LVD + G L +A T++ P + W AL+
Sbjct: 335 DEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Query: 508 YAYH 511
H
Sbjct: 395 CTVH 398
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 184/448 (41%), Gaps = 87/448 (19%)
Query: 55 EARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCA 114
++R F++ P ++ ++W+++IS ++Q +L M ++ ++ + SCA
Sbjct: 68 DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA 127
Query: 115 RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSL 174
+G+ VH L +K+G++ VGS+L+ +C I A +F+E+ N V WS
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSG 187
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLP 234
M+ GY Q MG E AL LF+ +
Sbjct: 188 MMYGYAQ---MGEN-----------------------------EEALWLFKEALFENLAV 215
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
N+++ VI +CA L G+ +HGL IK D + +G +L Y
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLY------------- 262
Query: 295 ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSK 354
C G E A +F + N +N M+K YA S +K
Sbjct: 263 -----SKC--------------GVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVI 303
Query: 355 RLFEK-----MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT---WNSMMSG 406
LF++ M P +T LN +++ S G +DE FD+ K R T + S++
Sbjct: 304 ELFKRMKLSGMKPNFITFLN-VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDM 362
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC-----TSLCSFQQGQLLHAHLSKT 461
G+ EAL++ M +D + S + L +C T L +F ++
Sbjct: 363 LGRAGRLQEALEVITNM---PIDPTESVWGALLTSCTVHKNTELAAFAADKVFEL----G 415
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRS 489
P + +++ +L + Y+ G DA ++
Sbjct: 416 PVSSGMHI--SLSNAYAADGRFEDAAKA 441
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 229/471 (48%), Gaps = 21/471 (4%)
Query: 245 ICARLGALHAGKVVHGLCIKDGL----DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGE 300
I + G LH + +H L ++ L D + LA RD I+ + RV+ S
Sbjct: 18 IVSSTGKLHL-RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRD-INYSCRVF-SQRLN 74
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRET-----NPISYNLMIKGYAMSSQIEKSKR 355
L+ N++I L E +F LR NP+S + +K S + +
Sbjct: 75 PTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ 134
Query: 356 LFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNG 411
+ K+ S + T++ +YS +A K+FD+ +R++V+WN + S Y+ N
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP-KRDTVSWNVLFSCYLRNK 193
Query: 412 QHSEALKLYVTMRRL---SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
+ + L L+ M+ V T + +AC +L + G+ +H + + +
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 469 VGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG 528
+ LV YS+CG + A + F + NV +WTALI+G A +G G E+I F ML G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 529 VLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC-YRVTPTIEHYTCVVDLLGRSGRLKE 587
+ P T +LSACSH+GL+ +G+ F M+ +++ P + HY CVVDLLGR+ L +
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 588 AEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAI 647
A I M ++ D IW LL A D+E+GER L L +V+L N Y+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433
Query: 648 LGRWGQKTTIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIY 698
+G+W + T +R ++ + PGCS IEL +H F V+D +H + IY
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 204/476 (42%), Gaps = 77/476 (16%)
Query: 15 KRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTM 74
+++ L T+L+R+S+ H + +S+ R ++ + +F + T+S NTM
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR----DINYSCRVFSQRLNPTLSHCNTM 83
Query: 75 ISGYSQWGRYDEALALASFMHR-SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
I +S E L + R S + N +S S L C +SG L G Q+H + G
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 134 FEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFG 193
F L+ + L+ C +A VF+E+ + V W+++ S Y++ + + LF
Sbjct: 144 FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFD 203
Query: 194 KMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALH 253
KM DV DGC V P+ T ++ CA LGAL
Sbjct: 204 KMK-NDV--------------DGC--------------VKPDGVTCLLALQACANLGALD 234
Query: 254 AGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGL 313
GK VH D +D +N + GA LN++N+L+
Sbjct: 235 FGKQVH-----DFID-ENGLSGA--------------------------LNLSNTLVSMY 262
Query: 314 ILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM-----APKNLTSL 368
G +++A +FYG+RE N +S+ +I G AM+ +++ F +M +P+ T L
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT-L 321
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN--GQHSEALKLYVTMRRL 426
++S S +G + E + FD+ + + N G + + G+ K Y ++ +
Sbjct: 322 TGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM 381
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF-QANVYVGTALVDFYSKCG 481
+ + + L AC + G+ + +HL + +A YV L++ YS G
Sbjct: 382 EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYV--LLLNTYSTVG 435
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 245/497 (49%), Gaps = 49/497 (9%)
Query: 219 RALDLFRCMRRSEV-LPNEFTLDCVIRICA-RLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+AL L+ +RR V P L ++R CA + + GK++H IK G+ D +G +
Sbjct: 29 QALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSS 86
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-NPI 335
L Y + A++V++ M E + N++IGG + G A +F + N +
Sbjct: 87 LISMYGKCGCVVSARKVFDEMP-ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTV 145
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMA--PKNLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
++ MIKGY +IEK++ LFE+M KN+ + + M+ VY N ++++A K F+
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPE 205
Query: 394 E------------------------------RNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
+ R+ V WN++++GY NG +A+ + M
Sbjct: 206 KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM 265
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHL 483
+ + T S + AC G+ +H+ ++ + N +V AL+D Y+KCG L
Sbjct: 266 QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
+A F SI +VA ++I+ A HG G E++ +F +M + P+ TF+A+L+AC
Sbjct: 326 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
H G L +GL+IF M+ V P ++H+ C++ LLGRSG+LKEA + +M ++ + +
Sbjct: 386 VHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTV 444
Query: 604 WGALLNASWFWKDIEVGER-------AAEKLFSLDPNPISGFVILSNMYAILGRWGQKTT 656
GALL A D E+ E+ A S N ++ +SN+YA RW
Sbjct: 445 LGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLAS---ISNLYAHTERWQTAEA 501
Query: 657 IRKRLQSLELRKDPGCS 673
+R ++ L K PG S
Sbjct: 502 LRVEMEKRGLEKSPGLS 518
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 19/371 (5%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
I+ K G + AR +FDEMP R V++WN MI GY G D LA F S + N
Sbjct: 88 ISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG--DAVLASGLFEEISVCR-NT 144
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFE-KFGLVGSALLYFCVRCCGIGEAELVFE 162
+++ ++ + + ++ L + FE K S +L V + +A FE
Sbjct: 145 VTWIEMIKGYGKRIEI---EKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG-CERAL 221
++ + N +WSLM+SGY + + A +F ++ RD+V W TLI+GYA ++G + A+
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA--QNGYSDDAI 259
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
D F M+ P+ T+ ++ CA+ G L G+ VH L G++ + + AL + Y
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 282 CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISY 337
+++A V+ES+ + + NS+I L + G+ +EA +F + + + I++
Sbjct: 320 AKCGDLENATSVFESISVRS-VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKG 393
++ + + ++F +M + N+ +I + ++G+L EA +L +
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 438
Query: 394 ERNSVTWNSMM 404
+ N +++
Sbjct: 439 KPNDTVLGALL 449
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 182/445 (40%), Gaps = 82/445 (18%)
Query: 109 VLSSCA-RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+L +CA + LGK +HS +K G +VGS+L+ +C + A VF+E+ +
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPV-RDVVAWTTLISGYARREDGCERALDLFRC 226
N W+ M+ GY+ A LF ++ V R+ V W +I GY +R + E+A +LF
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIE-IEKARELF-- 167
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
E +P E L + A V+ G+ Y +
Sbjct: 168 ----ERMPFE------------LKNVKAWSVMLGV-------------------YVNNRK 192
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAM 346
++DA++ +E + E V + ++ G +G + EA IFY + + + +N +I GYA
Sbjct: 193 MEDARKFFEDI-PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Query: 347 SSQIEKSKRLF-----EKMAPKNLT---------------------SL------------ 368
+ + + F E P +T SL
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFV 311
Query: 369 -NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
N +I +Y+K G+L+ A +F+ R+ NSM+S +G+ EAL+++ TM L
Sbjct: 312 SNALIDMYAKCGDLENATSVFESIS-VRSVACCNSMISCLAIHGKGKEALEMFSTMESLD 370
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+ TF + AC +G + + + + NV L+ + G L +A
Sbjct: 371 LKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 488 RSFTSI-FSPNVAAWTALINGYAYH 511
R + PN AL+ H
Sbjct: 431 RLVKEMHVKPNDTVLGALLGACKVH 455
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 21/262 (8%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
+ G++ EAR +F + R + WNT+I+GY+Q G D+A+ M + + ++ S+
Sbjct: 220 RIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSS 279
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
+LS+CA+SG L +G++VHSL+ G E V +AL+ +C + A VFE + +
Sbjct: 280 ILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRS 339
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRD--------VVAWTTLISGYARREDGCERA 220
+ M+S A+++F M D + T + G E
Sbjct: 340 VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME-----G 394
Query: 221 LDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDNSIGGAL-- 277
L +F M+ +V PN C+I + R G L A ++V + +K ++++ GAL
Sbjct: 395 LKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKP----NDTVLGALLG 450
Query: 278 -AEFYCDRDAIDDAKRVYESMG 298
+ + D + + ++ E+ G
Sbjct: 451 ACKVHMDTEMAEQVMKIIETAG 472
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS-FQQGQLLHAHLS 459
++++ +I G +AL LY +RR V + ++ RAC + G+LLH+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGV-YFPGWVPLILRACACVVPRVVLGKLLHSESI 73
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
K ++V VG++L+ Y KCG + A++ F + NVA W A+I GY +G +
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
LF + V N T++ ++ + E+F M + ++ ++ ++ +
Sbjct: 134 LFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGVY 187
Query: 580 GRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLD 631
+ ++++A +F +P E + +W +++ + D+ ++F+ D
Sbjct: 188 VNNRKMEDARKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARD 238
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 40 TNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCV 99
+N I AK G+L A +F+ + +R+V+ N+MIS + G+ EAL + S M +
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 100 KLNEISFSAVLSSCARSGSLFLGKQVHSLL----LKSGFEKFGLVGSALLYFCVRCCGIG 155
K +EI+F AVL++C G L G ++ S + +K + FG L++ R +
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG----CLIHLLGRSGKLK 427
Query: 156 EAELVFEEL--RDGNHVLWSLMLSGYVQRD 183
EA + +E+ + + VL +L+ + V D
Sbjct: 428 EAYRLVKEMHVKPNDTVLGALLGACKVHMD 457
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 182/322 (56%), Gaps = 11/322 (3%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM--RRL 426
N +I +Y + +A K+FD+ ERN V+WNS+M+ + NG+ + + + M +R
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMT-ERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRF 210
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
D + T VL AC S G+L+H+ + + N +GTALVD Y+K G L A
Sbjct: 211 CPDET--TMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 487 QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSH 545
+ F + NV W+A+I G A +G E++ LF M+ + V PN TF+ +L ACSH
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 546 AGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWG 605
GL++DG + FH M+ +++ P + HY +VD+LGR+GRL EA +FI +MP E D V+W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 606 ALLNASWFWKDIE---VGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQ 662
LL+A D + +GE+ ++L L+P VI++N +A W + +R+ ++
Sbjct: 387 TLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMK 446
Query: 663 SLELRKDPGCSWIELNNNIHMF 684
+++K G S +EL + H F
Sbjct: 447 ETKMKKIAGESCLELGGSFHRF 468
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 190/448 (42%), Gaps = 61/448 (13%)
Query: 2 ILFLRFCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFD 61
++FL+ C ++ ++L DS +IS + ++ + +LA AR +
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDS-----FIISELVRVSSLSLAKDLAFARTLLL 71
Query: 62 EMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFL 121
T S+WN + GYS E++ + S M R +K N+++F +L +CA L
Sbjct: 72 HSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTA 131
Query: 122 GKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
G+Q+ +LK GF+ VG+ L++ C +A VF+E+ + N V W+ +++ V+
Sbjct: 132 GRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVE 191
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDC 241
+ + F CE M P+E T+
Sbjct: 192 NGKLNLVFECF------------------------CE--------MIGKRFCPDETTMVV 219
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
++ C G L GK+VH + L+ + +G AL + Y ++ A+ V+E M +
Sbjct: 220 LLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 302 CLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYN---------------LMIKGYAM 346
+++I GL G EEA +F + + + + N L+ GY
Sbjct: 278 VWT-WSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKY 336
Query: 347 SSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSG 406
++EK K+ P + M+ + + G L+EA K E ++V W +++S
Sbjct: 337 FHEMEK----IHKIKPM-MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Query: 407 -YIHNGQHSEALKLYVTMRRLSVDHSRS 433
IH+ + E + V R + ++ RS
Sbjct: 392 CSIHHDEDDEGIGEKVKKRLIELEPKRS 419
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
TWN + GY + E++ +Y M+R + ++ TF L +AC S G+ + +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
K F +VYVG L+ Y C +DA++ F + NV +W +++ +G +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
F M+ + P+ T V +LSAC G L+ G ++ HS + + T +VD+
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNCRLGTALVDM 256
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+SG L+ A +M ++ + W A++
Sbjct: 257 YAKSGGLEYARLVFERM-VDKNVWTWSAMI 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 20/323 (6%)
Query: 202 AWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
W L GY+ + E ++ ++ M+R + PN+ T +++ CA L AG+ +
Sbjct: 80 TWNMLSRGYSSSDSPVE-SIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 262 CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEE 321
+K G DFD +G L Y DA++V++ M E + NS++ L+ G++
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM-TERNVVSWNSIMTALVENGKL-- 195
Query: 322 AELIFYGLRET-----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN-----TM 371
L+F E P +++ A + K + ++ + L LN +
Sbjct: 196 -NLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVREL-ELNCRLGTAL 253
Query: 372 ISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT-MRRLSVDH 430
+ +Y+K+G L+ A +F++ ++N TW++M+ G G EAL+L+ M+ SV
Sbjct: 254 VDMYAKSGGLEYARLVFERMV-DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 431 SRSTFSVLFRACTSLCSFQQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
+ TF + AC+ G + H + + A+VD + G L +A
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDF 372
Query: 490 FTSI-FSPNVAAWTALINGYAYH 511
+ F P+ W L++ + H
Sbjct: 373 IKKMPFEPDAVVWRTLLSACSIH 395
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 187/324 (57%), Gaps = 19/324 (5%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN---GQHSEALKLYVTMRR 425
T++ Y+KNG+L A K+FD+ ER SVTWN+M+ GY + G H+ A K V RR
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMP-ERTSVTWNAMIGGYCSHKDKGNHN-ARKAMVLFRR 208
Query: 426 LS-----VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF--QANVYVGTALVDFYS 478
S V + +T + A + + G L+H ++ K F + +V++GTALVD YS
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYS 268
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
KCG L +A F + NV WT++ G A +G G+E+ L M G+ PN TF +
Sbjct: 269 KCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+LSA H GL+ +G+E+F SM+ + VTP IEHY C+VDLLG++GR++EA +FI MPI+
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEKLFSL--DPNPISG-----FVILSNMYAILGRW 651
D ++ +L NA + + +GE + L + + +SG +V LSN+ A G+W
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKW 448
Query: 652 GQKTTIRKRLQSLELRKDPGCSWI 675
+ +RK ++ ++ PG S++
Sbjct: 449 VEVEKLRKEMKERRIKTRPGYSFV 472
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGY---SQWGRYDEALALASFMHRSC----VK 100
AK G+L AR +FDEMP RT +WN MI GY G ++ A+ F SC V+
Sbjct: 158 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 101 LNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGF--EKFGLVGSALLYFCVRCCGIGEAE 158
+ + VLS+ +++G L +G VH + K GF E +G+AL+ +C + A
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 159 LVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTLISGYARRE 214
VFE ++ N W+ M +G +L +M + + +T+L+S Y R
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAY-RHI 336
Query: 215 DGCERALDLFRCMR-RSEVLPNEFTLDCVIRICARLGALH 253
E ++LF+ M+ R V P C++ + + G +
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQ 376
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 133/312 (42%), Gaps = 53/312 (16%)
Query: 97 SCVKLNEISFSAVLSSCARSGS---LFLGKQVHSLLLKSGF-EKFGLVGSALLYFCVRCC 152
S + LNE +F VL +CARS S L +G+ VH ++ K GF + L+G+ LL+F
Sbjct: 102 SLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHF----- 156
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
Y + + A +F +MP R V W +I GY
Sbjct: 157 --------------------------YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCS 190
Query: 213 RED----GCERALDLFRCMR--RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
+D +A+ LFR S V P + T+ CV+ ++ G L G +VHG K G
Sbjct: 191 HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLG 250
Query: 267 L--DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAEL 324
+ D IG AL + Y +++A V+E M + S+ GL L GR E
Sbjct: 251 FTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVF-TWTSMATGLALNGRGNETPN 309
Query: 325 IFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVY 375
+ + E+ N I++ ++ Y +E+ LF+ M + + ++ +
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 376 SKNGELDEAVKL 387
K G + EA +
Sbjct: 370 GKAGRIQEAYQF 381
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 451 GQLLHAHLSKTPF-QANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 509
G+++H + K F + +GT L+ FY+K G L A++ F + W A+I GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 510 YHG-----LGSESILLFR--SMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
H ++++LFR S GV P T V +LSA S GLL G + H
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGYIEK 248
Query: 563 YRVTPTIEHY--TCVVDLLGRSGRLKEAEEFINQMPIE 598
TP ++ + T +VD+ + G L A M ++
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK 286
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 195/361 (54%), Gaps = 4/361 (1%)
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYS 376
G+ ELI G I + ++ Y ++ ++++F++M+ +N+ N MI +
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGV-VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFC 179
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
+G+++ + LF K ER+ V+WNSM+S G+ EAL+L+ M D +T
Sbjct: 180 DSGDVERGLHLF-KQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 437 VLFRACTSLCSFQQGQLLHAHL-SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS 495
+ SL G+ +H+ S F+ + VG ALVDFY K G L A F +
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQR 298
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLE 554
NV +W LI+G A +G G I LF +M+ +G V PN ATF+ +L+ CS+ G + G E
Sbjct: 299 RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEE 358
Query: 555 IFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFW 614
+F M +++ EHY +VDL+ RSGR+ EA +F+ MP+ A+ +WG+LL+A
Sbjct: 359 LFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSH 418
Query: 615 KDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW 674
D+++ E AA +L ++P +V+LSN+YA GRW +R ++ LRK G S
Sbjct: 419 GDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQST 478
Query: 675 I 675
I
Sbjct: 479 I 479
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 208/452 (46%), Gaps = 59/452 (13%)
Query: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCAR 115
A +F + V +N MI YS G E+L+ S M + +E +++ +L SC+
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 116 SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLM 175
L GK VH L+++GF + G + ++ +G+A+ VF+E+ + N V+W+LM
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 176 LSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCER---ALDLFRCMRRSEV 232
+ G+ + + LF +M R +V+W ++IS ++ C R AL+LF M
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSK----CGRDREALELFCEMIDQGF 230
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGL--DFDNSIGGALAEFYCDRDAIDDA 290
P+E T+ V+ I A LG L GK +H GL DF ++G AL +FYC
Sbjct: 231 DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFI-TVGNALVDFYCKS------ 283
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQI 350
G +E A IF ++ N +S+N +I G A++ +
Sbjct: 284 --------------------------GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 351 EKSKRLFE------KMAPKNLTSLNTMISVYSKNGELDEAVKLF----DKTKGERNSVTW 400
E LF+ K+AP T L +++ S G+++ +LF ++ K E + +
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLG-VLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
+M+ +G+ +EA K ++ + V+ + + + L AC S + ++ L K
Sbjct: 377 GAMVDLMSRSGRITEAFKF---LKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Query: 461 T-PFQANVYVGTALVDFYSKCGHLADAQRSFT 491
P + YV L + Y++ G D ++ T
Sbjct: 434 IEPGNSGNYV--LLSNLYAEEGRWQDVEKVRT 463
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 151/353 (42%), Gaps = 41/353 (11%)
Query: 31 EPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
E +V+ N+ I +G++ H+F +M R++ SWN+MIS S+ GR EAL L
Sbjct: 162 EMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALEL 221
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG-FEKFGLVGSALLYFCV 149
M +E + VL A G L GK +HS SG F+ F VG+AL+ F
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
+ + A +F +++ N V W+ TLISG
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWN-------------------------------TLISG 310
Query: 210 YARREDGCERALDLFRCM-RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD-GL 267
A G E +DLF M +V PNE T V+ C+ G + G+ + GL ++ L
Sbjct: 311 SAVNGKG-EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY 327
+ GA+ + I +A + ++M A + SL+ G ++ AE+
Sbjct: 370 EARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAM 429
Query: 328 GLRETNP---ISYNLMIKGYAMSSQ---IEKSKRLFEKMAPKNLTSLNTMISV 374
L + P +Y L+ YA + +EK + L +K + T +T+ V
Sbjct: 430 ELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTICDV 482
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 33/275 (12%)
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
L IS+ D A ++F + N + +N+M+ Y G E+L + +M+
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNP-NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG 97
Query: 428 VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ 487
+ T++ L ++C+SL + G+ +H L +T F + +V+ Y+ G + DAQ
Sbjct: 98 IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQ 157
Query: 488 RSFTSIFSPNVAAWTALINGY--------AYH-----------------------GLGSE 516
+ F + NV W +I G+ H G E
Sbjct: 158 KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
++ LF M+ QG P+ AT V +L + G+L+ G I + + I +V
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGVIWGALLNAS 611
D +SG L+ A +M + V W L++ S
Sbjct: 278 DFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGS 311
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/527 (29%), Positives = 272/527 (51%), Gaps = 25/527 (4%)
Query: 164 LRDGNHVLWS--LMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERAL 221
+R GN + S L+L R+ +A LF ++P RD+ + + +S + R + + L
Sbjct: 11 IRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPND-TL 69
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
LF + R+ + T V+ C+ L G+ VH L IK G + AL + Y
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 282 CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISY 337
+ D+ RV+ES+ E L N+L+ G + G+ +EA +F + E + +
Sbjct: 130 SKYGHLVDSVRVFESVE-EKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 338 NLMIKGYAMSSQIEKSKRLFEKM--APKNLTSLNT-MISVYSKNGELDEAVKLFDKTKGE 394
+ ++K A +++ K++ + ++L L T MIS YS G ++EA+K+++
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVH 248
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
+ V NS++SG I N + EA L ++ +R +V S+ + C+ G+ +
Sbjct: 249 TDEVMLNSLISGCIRNRNYKEAF-LLMSRQRPNVRVLSSSLA----GCSDNSDLWIGKQI 303
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
H + F ++ + L+D Y KCG + A+ F +I S +V +WT++I+ YA +G G
Sbjct: 304 HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDG 363
Query: 515 SESILLFRSMLVQG--VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHY 572
+++ +FR M +G VLPN+ TF+ ++SAC+HAGL+ +G E F M+ YR+ P EHY
Sbjct: 364 VKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADG-----VIWGALLNASWFWKDIEVGERAAEKL 627
C +D+L ++G +E + +M +E D IW A+L+A D+ GE A +L
Sbjct: 424 VCFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRL 482
Query: 628 F-SLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
P S +V++SN YA +G+W +R +L++ L K G S
Sbjct: 483 MEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 187/403 (46%), Gaps = 41/403 (10%)
Query: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCAR 115
A H+FDE+P R +SS N+ +S + + G ++ LAL +HR+ L+ +F+ VL +C+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 116 SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLM 175
G+QVH+L++K G E + +AL+ + + ++ VFE + + + V W+ +
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 176 LSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPN 235
LSG++ R + AL +F M R V +
Sbjct: 157 LSGFL--------------------------------RNGKGKEALGVFAAMYRERVEIS 184
Query: 236 EFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE 295
EFTL V++ CA L L GK VH + + G D +G A+ FY I++A +VY
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV-VLGTAMISFYSSVGLINEAMKVYN 243
Query: 296 SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKR 355
S+ + NSLI G I +EA L+ R N + + G + +S + K+
Sbjct: 244 SLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-PNVRVLSSSLAGCSDNSDLWIGKQ 302
Query: 356 LFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNG 411
+ S N ++ +Y K G++ +A +F + ++ V+W SM+ Y NG
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF-RAIPSKSVVSWTSMIDAYAVNG 361
Query: 412 QHSEALKLYVTM--RRLSVDHSRSTFSVLFRACTSLCSFQQGQ 452
+AL+++ M V + TF V+ AC ++G+
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGK 404
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 68/291 (23%)
Query: 38 ISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
IS I +K G L ++ +F+ + + + SWN ++SG+ + G+ EAL + + M+R
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG-------------FEKFGLVGSAL 144
V+++E + S+V+ +CA L GKQVH++++ +G + GL+ A+
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 145 LYF------------------CVRCCGIGEAELVFEELRDGNHVLWS------------- 173
+ C+R EA L+ R VL S
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWI 299
Query: 174 -------LMLSGYVQRDMMGNA-MDLFGK-------------MPVRDVVAWTTLISGYAR 212
+ +G+V + N MD++GK +P + VV+WT++I YA
Sbjct: 300 GKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAV 359
Query: 213 REDGCERALDLFR--CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGL 261
DG +AL++FR C S VLPN T VI CA G + GK G+
Sbjct: 360 NGDGV-KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM 409
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM--HRSCVKLNEIS 105
K G++ +AR +F +P ++V SW +MI Y+ G +AL + M S V N ++
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 106 FSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
F V+S+CA +G + GK+ ++ EK+ LV Y C
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMK----EKYRLVPGTEHYVC 425
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 252/529 (47%), Gaps = 48/529 (9%)
Query: 44 IAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKL-N 102
I+ + G+L AR +FD MP + +W MI GY ++G DEA AL + ++ N
Sbjct: 124 ISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTN 183
Query: 103 EISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
E F +L+ C+R LG+QVH ++K G +V S+L+YF +C GE
Sbjct: 184 ERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL-IVESSLVYFYAQC---GE------ 233
Query: 163 ELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALD 222
+ +A+ F M +DV++WT +IS +R+ G +A+
Sbjct: 234 ----------------------LTSALRAFDMMEEKDVISWTAVISACSRKGHGI-KAIG 270
Query: 223 LFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYC 282
+F M LPNEFT+ +++ C+ AL G+ VH L +K + D +G +L + Y
Sbjct: 271 MFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 283 DRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIK 342
I D ++V++ M + S+I G EEA +F ++ + I+ NL +
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVT-WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVV 389
Query: 343 GY--------AMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
A+ E ++ + KN+ +T++ +Y K GE +A + +
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS- 448
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
R+ V+W +M+SG G SEAL M + V+ + T+S +AC + S G+ +
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLG 514
H+ K +NV+VG+AL+ Y+KCG +++A R F S+ N+ +W A+I GYA +G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 515 SESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
E++ L M +G + F ILS C L E S CY
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCGDIEL----DEAVESSATCY 613
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 230/504 (45%), Gaps = 50/504 (9%)
Query: 116 SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLM 175
S + L K++H++ LK ++ G+ L+ CVR +LV+
Sbjct: 95 SNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRL-----GDLVY-------------- 135
Query: 176 LSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARR--EDGCERALDLFRCMRRSEV- 232
A +F MP ++ V WT +I GY + ED A LF + +
Sbjct: 136 ------------ARKVFDSMPEKNTVTWTAMIDGYLKYGLED---EAFALFEDYVKHGIR 180
Query: 233 LPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKR 292
NE C++ +C+R G+ VHG +K G+ + + +L FY + A R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALR 239
Query: 293 VYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEK 352
++ M + ++ ++I G +A +F G+ + + + EK
Sbjct: 240 AFDMMEEKDVIS-WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 353 SKR--------LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMM 404
+ R + ++M ++ +++ +Y+K GE+ + K+FD RN+VTW S++
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN-RNTVTWTSII 357
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
+ + G EA+ L+ M+R + + T + RAC S+ + G+ LHA + K +
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIE 417
Query: 465 ANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSM 524
NVY+G+ LV Y KCG DA + S +V +WTA+I+G + G SE++ + M
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Query: 525 LVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGR 584
+ +GV PN T+ + L AC+++ L G I HS+ + + ++ + + G
Sbjct: 478 IQEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 585 LKEAEEFINQMPIEADGVIWGALL 608
+ EA + MP E + V W A++
Sbjct: 537 VSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 4/185 (2%)
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
S D R +++L S + + +HA K +Y G L+ + G L A
Sbjct: 77 SFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYA 136
Query: 487 QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV-LPNAATFVAILSACSH 545
++ F S+ N WTA+I+GY +GL E+ LF + G+ N FV +L+ CS
Sbjct: 137 RKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR 196
Query: 546 AGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWG 605
G ++ +M +E + +V + G L A + M E D + W
Sbjct: 197 RAEFELGRQVHGNMVKVGVGNLIVE--SSLVYFYAQCGELTSALRAFDMME-EKDVISWT 253
Query: 606 ALLNA 610
A+++A
Sbjct: 254 AVISA 258
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 322/661 (48%), Gaps = 58/661 (8%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V + N I K+G L A FDEM +R V ++N +ISG S++G A+ L + M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 97 SCVKLNEISFSAVLSSCARSGSLFL--GKQVHSLLLKSGFEKFGLVGSAL--LYFCVRCC 152
++ + +F +VLS C S LF G QVH ++ GF V SAL LY C+R
Sbjct: 106 CGLRESASTFPSVLSVC--SDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLV 163
Query: 153 GIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYAR 212
+ A +F+E+ D N + +L+L + Q +G ++
Sbjct: 164 DV--ALKLFDEMLDRNLAVCNLLLRCFCQ--------------------------TGESK 195
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
R +++ M V N T +IR C+ ++ GK +H L +K G + N
Sbjct: 196 R------LFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 273 -IGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIF 326
+ L ++Y + + R + ++ + ++ NS++ G + ++ ++ F
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS-WNSIVSVCADYGSVLDSLDLFSKMQF 308
Query: 327 YGLRET-NPISYNLMIKGYAMSSQIEKSKRL---FEKMA--PKNLTSLNTMISVYSKNGE 380
+G R + P + + + +S I+ K++ KM +L + +I +Y K
Sbjct: 309 WGKRPSIRP--FMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG 366
Query: 381 LDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR 440
++ + L+ N NS+M+ +H G + ++++ M T S + +
Sbjct: 367 IENSALLYQSLPC-LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 441 ACT-SLC-SFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNV 498
A + SL S L+H K+ + A+V V +L+D Y+K G +++ F + +PN+
Sbjct: 426 ALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNI 485
Query: 499 AAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHS 558
T++INGYA +G+G++ + + R M ++P+ T +++LS CSH+GL+ +G IF S
Sbjct: 486 FCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDS 545
Query: 559 MQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIE 618
++ Y ++P + Y C+VDLLGR+G +++AE + Q +AD V W +LL + ++
Sbjct: 546 LESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNET 605
Query: 619 VGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWIELN 678
+G RAAE L +L+P + ++ +S Y +G + IR+ S EL ++ G S + +
Sbjct: 606 IGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVK 665
Query: 679 N 679
N
Sbjct: 666 N 666
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 153/344 (44%), Gaps = 45/344 (13%)
Query: 326 FYGLRETNPISYNLM-IKGYAMSSQIEKSKRLFEKMAPKNLT-SLNTMISVYSKNGELDE 383
Y LR T ++ +L + + + +++ S L E P +L + N I K+G L
Sbjct: 7 LYFLRRTTTLAQHLCSLTPFIATPRMDFSSFLEEN--PSDLVYTHNRRIDELIKSGNLLS 64
Query: 384 AVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
A + FD+ R+ VT+N ++SG G A++LY M + S STF + C+
Sbjct: 65 AHEAFDEMS-VRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCS 123
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD-AQRSFTSIFSPNVAAWT 502
++G +H + F N++V +ALV Y+ C L D A + F + N+A
Sbjct: 124 DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLAVCN 182
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI- 561
L+ + G ++ M ++GV N T+ ++ CSH L+ +G ++ HS+ +
Sbjct: 183 LLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL-HSLVVK 241
Query: 562 -------CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFW 614
+ +++Y+ DL SG ++ N +P E D + W ++++ +
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDL---SGSMRS----FNAVP-EKDVISWNSIVSVCADY 293
Query: 615 KDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIR 658
+ L SLD +++ + WG++ +IR
Sbjct: 294 GSV---------LDSLD------------LFSKMQFWGKRPSIR 316
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 176/394 (44%), Gaps = 54/394 (13%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMH 95
++ N+ + + + G+L+ + F+ +P + V SWN+++S + +G ++L L S M
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL-VGSALLYFCVRCCGI 154
+ + F + L+ C+R+ + GKQ+H +LK GF+ L V SAL+ +C GI
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 155 GEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGY 210
+ L+++ L N + +++ + + + +++FG M D V +T++
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL--- 424
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFD 270
+AL L LP +LH+ +VH IK G D
Sbjct: 425 --------KALSL--------SLPE---------------SLHSCTLVHCCAIKSGYAAD 453
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEA--CLNVANSLIGGLILMGRIEEAELIFYG 328
++ +L + Y + +++V++ + CL S+I G G + +
Sbjct: 454 VAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCL---TSIINGYARNGMGTDCVKMLRE 510
Query: 329 LRETNPISYNLMI----KGYAMSSQIEKSKRLFEKMAPKNLTS-----LNTMISVYSKNG 379
+ N I + I G + S +E+ + +F+ + K S M+ + + G
Sbjct: 511 MDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAG 570
Query: 380 ELDEAVKLFDKTKGERNSVTWNSMM-SGYIHNGQ 412
+++A +L + +G+ + V W+S++ S IH +
Sbjct: 571 LVEKAERLLLQARGDADCVAWSSLLQSCRIHRNE 604
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 213/408 (52%), Gaps = 12/408 (2%)
Query: 307 NSLIGGLILMGRIEEAELIFYGL-----RETNPISYNLMIKGYAMSSQIEKSKRLFEKMA 361
N++I G + + EEA L FY E + +Y ++K I + K++ ++
Sbjct: 101 NTMIRGYVNVMSFEEA-LCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 362 PKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEAL 417
L + N++I++Y + GE++ + +F+K + + + +W+SM+S G SE L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES-KTAASWSSMVSARAGMGMWSECL 218
Query: 418 KLYVTM-RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
L+ M ++ S AC + + G +H L + + N+ V T+LVD
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 477 YSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
Y KCG L A F + N ++A+I+G A HG G ++ +F M+ +G+ P+ +
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 537 VAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
V++L+ACSH+GL+ +G +F M +V PT EHY C+VDLLGR+G L+EA E I +P
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 597 IEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTT 656
IE + VIW L+ ++IE+G+ AA++L L + ++++SN+Y+ W
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVAR 458
Query: 657 IRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHL 704
R + L++ PG S +EL H F +D++H IY + +
Sbjct: 459 TRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 49/348 (14%)
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
+NTMI GY ++EAL + M + + + ++ +L +C R S+ GKQ+H +
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAEL---VFEELRDGNHVLWSLMLSGYVQRDMMGN 187
K G E V ++L+ RC GE EL VFE+L WS M+S M
Sbjct: 160 KLGLEADVFVQNSLINMYGRC---GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 188 AMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
+ LF R + + T L + E G AL CA
Sbjct: 217 CLLLF-----RGMCSETNLKA----EESGMVSAL----------------------LACA 245
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
GAL+ G +HG +++ + + + +L + Y +D A +++ M L +
Sbjct: 246 NTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYS- 304
Query: 308 SLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP 362
++I GL L G E A ++I GL E + + Y ++ + S +++ +R+F +M
Sbjct: 305 AMISGLALHGEGESALRMFSKMIKEGL-EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK 363
Query: 363 KNLTS-----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMS 405
+ ++ + + G L+EA++ E+N V W + +S
Sbjct: 364 EGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 145/315 (46%), Gaps = 14/315 (4%)
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
+ T+I GY E AL + M + P+ FT C+++ C RL ++ GK +HG
Sbjct: 100 FNTMIRGYVNVMS-FEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQV 158
Query: 263 IKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA 322
K GL+ D + +L Y ++ + V+E + + + + S++ MG E
Sbjct: 159 FKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS-SMVSARAGMGMWSEC 217
Query: 323 ELIFYGL-RETN-PISYNLMIKGY-------AMSSQIEKSKRLFEKMAPKNLTSLNTMIS 373
L+F G+ ETN + M+ A++ + L ++ N+ +++
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVD 277
Query: 374 VYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+Y K G LD+A+ +F K + +RN++T+++M+SG +G+ AL+++ M + ++
Sbjct: 278 MYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKT-PFQANVYVGTALVDFYSKCGHLADAQRSFTS 492
+ + AC+ ++G+ + A + K + LVD + G L +A + S
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 493 I-FSPNVAAWTALIN 506
I N W ++
Sbjct: 397 IPIEKNDVIWRTFLS 411
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM-H 95
V N I + GE+ + +F+++ +T +SW++M+S + G + E L L M
Sbjct: 167 VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCS 226
Query: 96 RSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
+ +K E + L +CA +G+L LG +H LL++ E +V ++L+ V+C +
Sbjct: 227 ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLD 286
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYA 211
+A +F+++ N++ +S M+SG +A+ +F KM D V + ++++ +
Sbjct: 287 KALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL 252
E ++ +V P C++ + R G L
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/555 (27%), Positives = 261/555 (47%), Gaps = 84/555 (15%)
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC---ERALDLF 224
N L +++ Y+++ + +A LF ++ RDVV+WT +IS ++R C AL LF
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSR----CGYHPDALLLF 101
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
+ M R +V N+FT V++ C LG L G +HG ++ N G
Sbjct: 102 KEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG-----SVEKGNCAGN--------- 147
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGY 344
L V ++L+ G++EEA L F ++E + +S+N MI GY
Sbjct: 148 ------------------LIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGY 189
Query: 345 AMSSQIEKSKRLFEKM-----APKNLT--------------------------------- 366
++ + S LF+ M P T
Sbjct: 190 TANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSS 249
Query: 367 -SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH-NGQHSEALKLYVTMR 424
+ ++++ Y K G L A KL + TK +R+ ++ ++++G+ N S+A ++ M
Sbjct: 250 ALIRSLVNAYVKCGSLANAWKLHEGTK-KRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH-LSKTPFQANVYVGTALVDFYSKCGHL 483
R+ S + + CT++ S G+ +H L + + +V +G +L+D Y+K G +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
DA +F + +V +WT+LI GY HG ++I L+ M + + PN TF+++LSAC
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP--IEADG 601
SH G G +I+ +M + + EH +C++D+L RSG L+EA I +
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 488
Query: 602 VIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRL 661
WGA L+A ++++ + AA +L S++P ++ L+++YA G W RK +
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLM 548
Query: 662 -QSLELRKDPGCSWI 675
+S K PG S +
Sbjct: 549 KESGSCNKAPGYSLV 563
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 214/488 (43%), Gaps = 68/488 (13%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K G++ AR +FD + R V SW MIS +S+ G + +AL L MHR VK N+ ++ +
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
VL SC G L G Q+H + K +V SALL RC + EA L F+ +++ +
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
V W+ M+ GY NA + + LF+ M
Sbjct: 179 LVSWNAMIDGYT-----ANAC---------------------------ADTSFSLFQLML 206
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
P+ FT ++R + L +HGL IK G +++ +L Y ++
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 289 DAKRVYESMGGE----------------ACLNVANSLIGGLILMGRIEEAELIFYGLRET 332
+A +++E C + A + +I M + ++ L+
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 333 NPI---SYNLMIKGYAM-SSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLF 388
I + I G+A+ SSQI L N++I +Y+K+GE+++AV F
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALG-----------NSLIDMYAKSGEIEDAVLAF 375
Query: 389 DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
++ K E++ +W S+++GY +G +A+ LY M + + TF L AC+
Sbjct: 376 EEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 449 QQG-QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQ---RSFTSIFSPNVAAWTAL 504
+ G ++ ++K +A + ++D ++ G+L +A RS I S + + W A
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 505 INGYAYHG 512
++ HG
Sbjct: 495 LDACRRHG 502
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 172/377 (45%), Gaps = 44/377 (11%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A+ G++ EAR FD M R + SWN MI GY+ D + +L M K + +F
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++L + L + ++H L +K GF + SAL+
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGR----SSALI---------------------- 252
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+++ YV+ + NA L RD+++ T LI+G++++ + A D+F+ M
Sbjct: 253 -----RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDNSIGGALAEFYCDRDA 286
R + +E + +++IC + ++ G+ +HG +K + FD ++G +L + Y
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIK 342
I+DA +E M E + SLI G G E+A ++ + + N +++ ++
Sbjct: 368 IEDAVLAFEEM-KEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 343 GYAMSSQIEKSKRLFEKMAPKNLTS-----LNTMISVYSKNGELDEAVKLFDKTKG--ER 395
+ + Q E ++++ M K+ L+ +I + +++G L+EA L +G
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSL 486
Query: 396 NSVTWNSMMSGYIHNGQ 412
+S TW + + +G
Sbjct: 487 SSSTWGAFLDACRRHGN 503
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 179/423 (42%), Gaps = 38/423 (8%)
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC 302
+++C+ ++HG I +G + + L + Y + + A+++++ +
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIK----------GYAMSS 348
++ ++I G +A L+F + + N +Y ++K G +
Sbjct: 79 VS-WTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 349 QIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
+EK NL + ++S+Y++ G+++EA FD K ER+ V+WN+M+ GY
Sbjct: 138 SVEKGN------CAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYT 190
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
N + L+ M TF L RA + + LH K F +
Sbjct: 191 ANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSA 250
Query: 469 VGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYH-GLGSESILLFRSMLVQ 527
+ +LV+ Y KCG LA+A + ++ + TALI G++ S++ +F+ M+
Sbjct: 251 LIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM 310
Query: 528 GVLPNAATFVAILSACSHAGLLNDGLEI----FHSMQICYRVTPTIEHYTCVVDLLGRSG 583
+ ++L C+ + G +I S QI + V ++D+ +SG
Sbjct: 311 KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG----NSLIDMYAKSG 366
Query: 584 RLKEAEEFINQMPIEADGVIWGALLNA----SWFWKDIEVGERAAEKLFSLDPNPISGFV 639
+++A +M E D W +L+ F K I++ R + + PN ++
Sbjct: 367 EIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE--RIKPNDVTFLS 423
Query: 640 ILS 642
+LS
Sbjct: 424 LLS 426
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 438 LFRACTSLCSFQ----QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
L+ LCS+Q Q L+H + F +N+ + L+D Y K G + A++ F I
Sbjct: 14 LYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRI 73
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
+V +WTA+I+ ++ G +++LLF+ M + V N T+ ++L +C G L +G+
Sbjct: 74 SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGM 133
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+I S++ I + ++ L R G+++EA + M E D V W A+++
Sbjct: 134 QIHGSVEKGNCAGNLIVR-SALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDG 188
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 15/356 (4%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
N +I +Y G LD A K+FD+ ER+ V+WNSM+ + G++ AL+L+ M+R S
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SF 247
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK---TPFQANVYVGTALVDFYSKCGHLAD 485
+ T + AC L S G HA L + +V V +L++ Y KCG L
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRM 307
Query: 486 AQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSML--VQGVLPNAATFVAILSAC 543
A++ F + ++A+W A+I G+A HG E++ F M+ + V PN+ TFV +L AC
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
+H G +N G + F M Y + P +EHY C+VDL+ R+G + EA + + MP++ D VI
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 604 WGALLNASW-FWKDIEVGERAAEKLF-------SLDPNPISGFVILSNMYAILGRWGQKT 655
W +LL+A +E+ E A + S + N +V+LS +YA RW
Sbjct: 428 WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVG 487
Query: 656 TIRKRLQSLELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSI 711
+RK + +RK+PGCS IE+N H F D +H + IY + + + SI
Sbjct: 488 IVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 158/393 (40%), Gaps = 73/393 (18%)
Query: 7 FCPVRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKT-GELAEARHMFDEMPL 65
F C + +L LR + P P + I + + ++ A +FD +
Sbjct: 52 FSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIEN 111
Query: 66 RTVSSWNTMISGYSQ-WGRYDEALAL-ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
+ WNT+I + R +EA L + R ++ +F VL +CA GK
Sbjct: 112 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 171
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
QVH ++K GF V + L++ C + A VF+E
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE-------------------- 211
Query: 184 MMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
MP R +V+W ++I R + + AL LFR M+RS P+ +T+ V+
Sbjct: 212 -----------MPERSLVSWNSMIDALVRFGE-YDSALQLFREMQRS-FEPDGYTMQSVL 258
Query: 244 RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
CA LG+L G H ++ CD D D +
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRK----------------CDVDVAMD-------------V 289
Query: 304 NVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA-- 361
V NSLI G + AE +F G+++ + S+N MI G+A + E++ F++M
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 362 -----PKNLTSLNTMISVYSKNGELDEAVKLFD 389
P ++T + +I+ + G +++ + FD
Sbjct: 350 RENVRPNSVTFVGLLIAC-NHRGFVNKGRQYFD 381
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G L AR +FDEMP R++ SWN+MI ++G YD AL L M RS + + + +VL
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVL 258
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFG---LVGSALLYFCVRCCGIGEAELVFEELRDG 167
S+CA GSL LG H+ LL+ LV ++L+ +C + AE VF+ ++
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM 227
+ W+ M+ G+ AM+ F +M +D
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRM-------------------------VD----- 348
Query: 228 RRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAI 287
+R V PN T ++ C G ++ G+ + ++ D I AL + C D I
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----DYCIEPALEHYGCIVDLI 403
Query: 288 DDAKRVYESM 297
A + E++
Sbjct: 404 ARAGYITEAI 413
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN-GQHSEALKLY 420
P L ++ + S +++ A ++FD + +S WN+++ H+ + EA LY
Sbjct: 80 PATLFLYGKILQLSSSFSDVNYAFRVFDSIENH-SSFMWNTLIRACAHDVSRKEEAFMLY 138
Query: 421 VTM-RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSK 479
M R + TF + +AC + F +G+ +H + K F +VYV L+ Y
Sbjct: 139 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
CG L A++ F + ++ +W ++I+ G ++ LFR M + P+ T ++
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSV 257
Query: 540 LSACSHAGLLNDGL--EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPI 597
LSAC+ G L+ G F + V + ++++ + G L+ AE+ M
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ- 316
Query: 598 EADGVIWGALL 608
+ D W A++
Sbjct: 317 KRDLASWNAMI 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM-- 94
V+ N I K G L A +F M R ++SWN MI G++ GR +EA+ M
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 95 HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKS-----GFEKFGLVGSALLYFCV 149
R V+ N ++F +L +C G + G+Q ++++ E +G + +
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCI----VDLIA 404
Query: 150 RCCGIGEA-ELVFEELRDGNHVLW------------SLMLSGYVQRDMMGNAMD 190
R I EA ++V + V+W S+ LS + R+++G D
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 241/505 (47%), Gaps = 12/505 (2%)
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
Y D + +A LF P R V W ++I YA+ L LF + RS+ P+ FT
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQF-TTVLSLFSQILRSDTRPDNFT 108
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
C+ R + + +HG+ I GL FD G A+ + Y I +A +++ S+
Sbjct: 109 YACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP 168
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGL--RETNPISYNL--MIKGYAMSSQIEKSK 354
+ L + N +I G G ++ +F + R P Y + + G S + +
Sbjct: 169 -DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAW 227
Query: 355 RLFEKMAPKNLTSLN----TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHN 410
+ NL S + ++++YS+ + A +F+ E + V +S+++GY
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSRC 286
Query: 411 GQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVG 470
G H EAL L+ +R +++ +C L G+ +H+++ + + ++ V
Sbjct: 287 GNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVC 346
Query: 471 TALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL 530
+AL+D YSKCG L A F I N+ ++ +LI G HG S + F +L G++
Sbjct: 347 SALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI 406
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEE 590
P+ TF A+L C H+GLLN G EIF M+ + + P EHY +V L+G +G+L+EA E
Sbjct: 407 PDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFE 466
Query: 591 FINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGF-VILSNMYAILG 649
F+ + D I GALL+ ++ + E AE + S + V+LSN+YA G
Sbjct: 467 FVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYG 526
Query: 650 RWGQKTTIRKRLQSLELRKDPGCSW 674
RW + +R + K PG SW
Sbjct: 527 RWDEVERLRDGISESYGGKLPGISW 551
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 187/466 (40%), Gaps = 59/466 (12%)
Query: 48 AKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
A +L AR +FD P R+V WN++I Y++ ++ L+L S + RS + + +++
Sbjct: 51 ALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYA 110
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+ + S + +H + + SG + GSA++
Sbjct: 111 CLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIV---------------------- 148
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGC----ERALDL 223
Y + ++ A LF +P D+ W +I GY GC ++ ++L
Sbjct: 149 ---------KAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY-----GCCGFWDKGINL 194
Query: 224 FRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCD 283
F M+ PN +T+ + L VH C+K LD + +G AL Y
Sbjct: 195 FNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSR 254
Query: 284 RDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKG 343
I A V+ S+ E L +SLI G G +EA +F LR + + ++
Sbjct: 255 CMCIASACSVFNSI-SEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCVLVA 312
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSL---------NTMISVYSKNGELDEAVKLFDKTKGE 394
+ S E S + K + L + +I +YSK G L A+ LF E
Sbjct: 313 IVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-E 371
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
+N V++NS++ G +G S A + + + + + TFS L C +GQ +
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 455 HAHLSKTPF----QANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+ K+ F Q YV +V G L +A S+ P
Sbjct: 432 FERM-KSEFGIEPQTEHYV--YMVKLMGMAGKLEEAFEFVMSLQKP 474
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 146/348 (41%), Gaps = 13/348 (3%)
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
+H K L D LA FY D + A+++++ E + + NS+I
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFP-ERSVFLWNSIIRAYAKAH 85
Query: 318 RIEEAELIFYGL--RETNP--ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN---- 369
+ +F + +T P +Y + +G++ S K R +A + +
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDT-KGLRCIHGIAIVSGLGFDQICG 144
Query: 370 -TMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
++ YSK G + EA KLF + + WN M+ GY G + + L+ M+
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
+ T L +HA K ++ YVG ALV+ YS+C +A A
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F SI P++ A ++LI GY+ G E++ LF + + G P+ +L +C+
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP 596
G E+ HS I + I+ + ++D+ + G LK A +P
Sbjct: 324 SVSGKEV-HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 193/343 (56%), Gaps = 8/343 (2%)
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
++ +Y ++ L +A K+FD+ + + V W+ +M+GY+ G SE L+++ M ++
Sbjct: 158 VLRIYVEDKLLLDARKVFDEIP-QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF-QANVYVGTALVDFYSKCGHLADAQRS 489
+ + AC + + QG+ +H + K + +++V+VGTALVD Y+KCG + A
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESIL-LFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + NV +W ALI GYA +G +++ L R G+ P++ + +L+AC+H G
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
L +G + +M+ Y +TP EHY+C+VDL+ R+GRL +A I +MP++ +WGALL
Sbjct: 337 LEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPI----SGFVILSNMYAILGRWGQKTTIRKRLQSL 664
N K++E+GE A + L L+ + + V LSN+Y + R + + +R ++
Sbjct: 397 NGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQR 456
Query: 665 ELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTAT 707
+RK PG S +E++ N+ F D +H I+ TV HL +
Sbjct: 457 GVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH-TVIHLLSV 498
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
L + + + N A +FD + NS +++M+ + Q L+ ++ M +
Sbjct: 50 LTAFLHLPNLNKHFHYASSIFDSIEIP-NSFVYDTMIRICSRSSQPHLGLRYFLLMVKEE 108
Query: 428 ---VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP-FQANVYVGTALVDFYSKCGHL 483
+ S TF L AC C F G+ +H + K F ++ +V T ++ Y + L
Sbjct: 109 EEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLL 168
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
DA++ F I P+V W L+NGY GLGSE + +FR MLV+G+ P+ + L+AC
Sbjct: 169 LDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTAC 228
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
+ G L G I ++ + + T +VD+ + G ++ A E ++ +
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFS 287
Query: 604 WGALL 608
W AL+
Sbjct: 288 WAALI 292
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 163/361 (45%), Gaps = 23/361 (6%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
R + + +++ + ++ AS + S N + ++ C+RS LG +
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 126 HSLLLKSGFEKFG---LVGSALLYFCVRCCGIGEAELVF-EELRDGNHVLWSLMLSG--- 178
L++K E L L+ C++ C + + +++G + S + +G
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 179 -YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEF 237
YV+ ++ +A +F ++P DVV W L++GY R G E L++FR M + P+EF
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSE-GLEVFREMLVKGLEPDEF 219
Query: 238 TLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
++ + CA++GAL GK +H K ++ D +G AL + Y I+ A V++
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 297 MGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI-----KGYAMSSQIE 351
+ + A +LIGG G ++A L + I + ++ A +E
Sbjct: 280 LTRRNVFSWA-ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 352 KSKRLFEKM------APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMS 405
+ + + E M PK+ + ++ + + G LD+A+ L +K + + W ++++
Sbjct: 339 EGRSMLENMEARYEITPKH-EHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLN 397
Query: 406 G 406
G
Sbjct: 398 G 398
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 33/274 (12%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L +AR +FDE+P V W+ +++GY + G E L + M ++ +E S + L++
Sbjct: 168 LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 113 CARSGSLFLGKQVHSLL-LKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVL 171
CA+ G+L GK +H + KS E VG+AL+ +C I A VF++L N
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS 287
Query: 172 WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE 231
W+ ++ GY GYA++ C L R R
Sbjct: 288 WAALIGGYAAY--------------------------GYAKKAMTC-----LERLEREDG 316
Query: 232 VLPNEFTLDCVIRICARLGALHAGK-VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+ P+ L V+ CA G L G+ ++ + + + + + + C +DDA
Sbjct: 317 IKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDA 376
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAEL 324
+ E M + +V +L+ G +E EL
Sbjct: 377 LNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 254/553 (45%), Gaps = 46/553 (8%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWG--RYDEALALASFMHRSCVKLNEISFSA 108
G + +A+ +FDE V SWN ++ G G RY + L+ + M V LN S S
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
V S A + +L G + H+L +K+G + ++L+ +C +G A VF+E+ +
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVE-- 277
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMR 228
RD+V W +I+G A + E AL LFR M
Sbjct: 278 -----------------------------RDIVVWGAMIAGLAHNKRQWE-ALGLFRTMI 307
Query: 229 RSE-VLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS-IGGALAEFYCDRDA 286
E + PN L ++ + + AL GK VH +K + + L + YC
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 287 IDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA--ELIFYGLRETNP--ISYNLMIK 342
+ +RV+ ++ +L+ G GR ++A +++ P ++ ++
Sbjct: 368 MASGRRVFYGSKQRNAIS-WTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 343 GYAMSSQIEKSKRL----FEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV 398
A I++ K + + + N++ + +++ +YSK G + ++LFD+ + +RN
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVK 485
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
W +M+ Y+ N ++++ M T + C+ L + + G+ LH H+
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESI 518
K F++ +V ++ Y KCG L A SF ++ WTA+I Y + L ++I
Sbjct: 546 LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAI 605
Query: 519 LLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDL 578
F M+ +G PN TF A+LS CS AG +++ F+ M Y + P+ EHY+ V++L
Sbjct: 606 NCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIEL 665
Query: 579 LGRSGRLKEAEEF 591
L R GR++EA+
Sbjct: 666 LNRCGRVEEAQRL 678
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 151/588 (25%), Positives = 261/588 (44%), Gaps = 62/588 (10%)
Query: 75 ISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGF 134
I +++ + AL + ++ + + +N +FSA+L +C R SL GKQVH + +G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 135 EKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGK 194
E + + L++ C + +A+ VF+E N W+ +L G
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRG---------------- 186
Query: 195 MPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHA 254
T+ISG R +D L F MR V N ++L V + A AL
Sbjct: 187 ----------TVISGKKRYQD----VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 255 GKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLI 314
G H L IK+GL + +L + Y + A+RV++ + E + V ++I GL
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVWGAMIAGLA 291
Query: 315 LMGRIEEAELIFYGLRETNPISYNLMI---------------KGYAMSSQIEKSKRLFEK 359
R EA +F + I N +I G + + + KSK E+
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 360 MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKL 419
+ +I +Y K G++ ++F +K +RN+++W ++MSGY NG+ +AL+
Sbjct: 352 PFVH-----SGLIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFDQALRS 405
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSK 479
V M++ T + + C L + +QG+ +H + K F NV + T+L+ YSK
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSK 465
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
CG R F + NV AWTA+I+ Y + I +FR ML+ P++ T +
Sbjct: 466 CGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRV 525
Query: 540 LSACSHAGLLNDGLEIF-HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
L+ CS L G E+ H ++ + P + ++ + G+ G L+ A + + ++
Sbjct: 526 LTVCSDLKALKLGKELHGHILKKEFESIPFVSAR--IIKMYGKCGDLRSANFSFDAVAVK 583
Query: 599 ADGVIWGALLNA----SWFWKDIEVGERAAEKLFSLDPNPISGFVILS 642
+ W A++ A F I E+ + F+ PN + +LS
Sbjct: 584 G-SLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT--PNTFTFTAVLS 628
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 189/455 (41%), Gaps = 53/455 (11%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL-ASFMHRSCVKLNEISFS 107
K G++ AR +FDE+ R + W MI+G + R EAL L + + + N + +
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKS-GFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD 166
+L +L LGK+VH+ +LKS + + V S L+ +C + VF +
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N + W+ ++SGY A+ R +V W
Sbjct: 381 RNAISWTALMSGYAANGRFDQAL--------RSIV-W----------------------- 408
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M++ P+ T+ V+ +CA L A+ GK +H +K+ + S+ +L Y
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 287 IDDAKRVY---ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKG 343
+ R++ E +A + + + L IE L+ + ++ ++
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 344 YAMSSQIEKSKRLFEKMAPKNLTSLN----TMISVYSKNGELDEAVKLFDKTKGERNSVT 399
+ ++ K L + K S+ +I +Y K G+L A FD + S+T
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV-AVKGSLT 587
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH-- 457
W +++ Y N +A+ + M +S + +TF+ F A S+CS Q G + A+
Sbjct: 588 WTAIIEAYGCNELFRDAINCFEQM--VSRGFTPNTFT--FTAVLSICS-QAGFVDEAYRF 642
Query: 458 ----LSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
L Q + + +++ ++CG + +AQR
Sbjct: 643 FNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 176/305 (57%), Gaps = 3/305 (0%)
Query: 372 ISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
I++Y K GE + A K+FD+ ER +WN+++ G H G+ +EA++++V M+R ++
Sbjct: 159 ITLYCKAGEFENARKVFDENP-ERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPD 217
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHL--SKTPFQANVYVGTALVDFYSKCGHLADAQRS 489
T + +C L LH + +KT ++++ + +L+D Y KCG + A
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
F + NV +W+++I GYA +G E++ FR M GV PN TFV +LSAC H GL+
Sbjct: 278 FEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLV 337
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLN 609
+G F M+ + + P + HY C+VDLL R G+LKEA++ + +MP++ + ++WG L+
Sbjct: 338 EEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
Query: 610 ASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKD 669
+ D+E+ E A + L+P +V+L+N+YA+ G W +RK +++ ++ K
Sbjct: 398 GCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKI 457
Query: 670 PGCSW 674
P S+
Sbjct: 458 PAYSY 462
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 40/327 (12%)
Query: 49 KTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSA 108
K GE AR +FDE P R + SWN +I G + GR +EA+ + M RS ++ ++ + +
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 109 VLSSCARSGSLFLGKQVHSLLLKSGFEKFG--LVGSALLYFCVRCCGIGEAELVFEELRD 166
V +SC G L L Q+H +L++ E+ ++ ++L+ +C + A +FEE+R
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 167 GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N V WS M+ GY GN ++ AL+ FR
Sbjct: 284 RNVVSWSSMIVGYAAN---GNTLE-----------------------------ALECFRQ 311
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG--GALAEFYCDR 284
MR V PN+ T V+ C G + GK + +K + + + G + +
Sbjct: 312 MREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAM-MKSEFELEPGLSHYGCIVDLLSRD 370
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPIS---YNLMI 341
+ +AK+V E M + + V L+GG G +E AE + + E P + Y ++
Sbjct: 371 GQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLA 430
Query: 342 KGYAMSSQIEKSKRLFEKMAPKNLTSL 368
YA+ + +R+ + M K + +
Sbjct: 431 NVYALRGMWKDVERVRKLMKTKKVAKI 457
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
WN++M YI + +A+++Y+ M R +V R + ++ +A + F G+ LH+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
+ F + + + + Y K G +A++ F + +W A+I G + G +E++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHS-MQICYRVTPTIEHYTCVVDL 578
+F M G+ P+ T V++ ++C G L+ ++ +Q I ++D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 579 LGRSGRLKEAEEFINQMPIEADGVIWGALL 608
G+ GR+ A +M + + V W +++
Sbjct: 265 YGKCGRMDLASHIFEEMR-QRNVVSWSSMI 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 160/371 (43%), Gaps = 55/371 (14%)
Query: 51 GELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
G++ +R + D+ P+ + WN ++ Y + +A+ + M RS V + S V+
Sbjct: 68 GDIFRSR-ILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 111 SSCARSGSLFLGKQVHSLLLKSGF--EKFGLVGSALLYFCVRCCGIGEAELVFEELRDGN 168
+ + LGK++HS+ ++ GF ++F G LY C GE E
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLY-----CKAGEFE---------- 169
Query: 169 HVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG--YARREDGCERALDLFRC 226
NA +F + P R + +W +I G +A R + A+++F
Sbjct: 170 ------------------NARKVFDENPERKLGSWNAIIGGLNHAGRAN---EAVEMFVD 208
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG--GALAEFYCDR 284
M+RS + P++FT+ V C LG L +H ++ + + I +L + Y
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLM 340
+D A ++E M ++ + S+I G G EA F +RE N I++ +
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWS-SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGV 327
Query: 341 IKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
+ +E+ K F M + L+ ++ + S++G+L EA K+ ++ +
Sbjct: 328 LSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKP 387
Query: 396 NSVTWNSMMSG 406
N + W +M G
Sbjct: 388 NVMVWGCLMGG 398
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 20 FRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYS 79
F+L +L+ ++ N I K G + A H+F+EM R V SW++MI GY+
Sbjct: 238 FQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA 297
Query: 80 QWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL-----LKSGF 134
G EAL M V+ N+I+F VLS+C G + GK +++ L+ G
Sbjct: 298 ANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGL 357
Query: 135 EKFGLVGSALLYFCVRCCGIGEAELVFEEL-RDGNHVLWSLMLSG 178
+G + L R + EA+ V EE+ N ++W ++ G
Sbjct: 358 SHYGCIVDLL----SRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 192/348 (55%), Gaps = 7/348 (2%)
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
++ +Y ++ L +A K+FD+ + + V W+ +M+GY+ G SE L+++ M ++
Sbjct: 158 VLRIYVEDKLLFDARKVFDEIP-QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF-QANVYVGTALVDFYSKCGHLADAQRS 489
+ + AC + + QG+ +H + K + +++V+VGTALVD Y+KCG + A
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 490 FTSIFSPNVAAWTALINGYAYHGLGSE-SILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + NV +W ALI GYA +G + + L R G+ P++ + +L+AC+H G
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
L +G + +M+ Y +TP EHY+C+VDL+ R+GRL +A + I +MP++ +WGALL
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPI----SGFVILSNMYAILGRWGQKTTIRKRLQSL 664
N K++E+GE A + L L+ + + V LSN+Y + R + +R ++
Sbjct: 397 NGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQR 456
Query: 665 ELRKDPGCSWIELNNNIHMFSVEDKTHAYSDVIYATVDHLTATINSII 712
+RK PG S +E++ + F D +H I+ + L+ + I+
Sbjct: 457 GIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQIL 504
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 6/247 (2%)
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS 427
L + + + N A +FD + NS +++M+ + Q L+ ++ M +
Sbjct: 50 LTAFLHLPNLNKHFHYASSIFDSIEIP-NSFVYDTMIRICSRSSQPHLGLRYFLLMVKEE 108
Query: 428 ---VDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTP-FQANVYVGTALVDFYSKCGHL 483
+ S TF L AC C F G+ +H + K F ++ +V T ++ Y + L
Sbjct: 109 EEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLL 168
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
DA++ F I P+V W L+NGY GLGSE + +F+ MLV+G+ P+ + L+AC
Sbjct: 169 FDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTAC 228
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
+ G L G I ++ + + T +VD+ + G ++ A E ++ +
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFS 287
Query: 604 WGALLNA 610
W AL+
Sbjct: 288 WAALIGG 294
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 165/365 (45%), Gaps = 31/365 (8%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
R + + +++ + ++ AS + S N + ++ C+RS LG +
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 126 HSLLLKSGFEKFG---LVGSALLYFCVRCC--GIGE-------AELVFEELRDGNHVLWS 173
L++K E L L+ C++ C +G+ VF L DG+ + +
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVF--LSDGH--VQT 156
Query: 174 LMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVL 233
+L YV+ ++ +A +F ++P DVV W L++GY R G E L++F+ M +
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSE-GLEVFKEMLVRGIE 215
Query: 234 PNEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDFDNSIGGALAEFYCDRDAIDDAKR 292
P+EF++ + CA++GAL GK +H K ++ D +G AL + Y I+ A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 293 VYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMI-----KGYAMS 347
V+E + + A +LIGG G ++A + + I + ++ A
Sbjct: 276 VFEKLTRRNVFSWA-ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHG 334
Query: 348 SQIEKSKRLFEKM------APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWN 401
+E+ + + E M PK+ + ++ + + G LD+A+ L +K + + W
Sbjct: 335 GFLEEGRTMLENMEARYGITPKH-EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWG 393
Query: 402 SMMSG 406
++++G
Sbjct: 394 ALLNG 398
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 33/279 (11%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L +AR +FDE+P V W+ +++GY + G E L + M ++ +E S + L++
Sbjct: 168 LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 113 CARSGSLFLGKQVHSLLLKSGF-EKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVL 171
CA+ G+L GK +H + K + E VG+AL+ +C I A VFE+L N
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS 287
Query: 172 WSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSE 231
W+ ++ GY GYA++ C L R R
Sbjct: 288 WAALIGGYAAY--------------------------GYAKKATTC-----LDRIEREDG 316
Query: 232 VLPNEFTLDCVIRICARLGALHAGK-VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
+ P+ L V+ CA G L G+ ++ + + G+ + + + C +DDA
Sbjct: 317 IKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDA 376
Query: 291 KRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
+ E M + +V +L+ G +E EL L
Sbjct: 377 LDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNL 415
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 184/345 (53%), Gaps = 6/345 (1%)
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
+ N +I+ Y++ + I+ + +LF++ +++ + N +I K E+ A +LFD + R
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFD-SMPLR 212
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
+ V+WNS++SGY EA+KL+ M L + AC +Q+G+ +H
Sbjct: 213 DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIH 272
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGS 515
+ + + ++ T LVDFY+KCG + A F + W A+I G A HG G
Sbjct: 273 DYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGE 332
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCV 575
++ FR M+ G+ P+ TF+++L CSH+GL+++ +F M+ Y V ++HY C+
Sbjct: 333 LTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392
Query: 576 VDLLGRSGRLKEAEEFINQMPIEADG----VIWGALLNASWFWKDIEVGERAAEKLFSLD 631
DLLGR+G ++EA E I QMP + + W LL +IE+ E+AA ++ +L
Sbjct: 393 ADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452
Query: 632 PNPISGFVILSNMYAILGRWGQKTTIRKRL-QSLELRKDPGCSWI 675
P + ++ MYA RW + +R+ + + +++K+ G S +
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 156/329 (47%), Gaps = 19/329 (5%)
Query: 94 MHRSCVKLNEISFSAVLSSCA--RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
M R V + +F V +CA ++G L L K +H L+ G + L+
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
I A +F+E + V +++++ G V+ + A +LF MP+RD+V+W +LISGYA
Sbjct: 166 APIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYA 225
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
+ + C A+ LF M + P+ + + CA+ G GK +H + L D+
Sbjct: 226 QM-NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS 284
Query: 272 SIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIF 326
+ L +FY ID A ++E + + L N++I GL + G E +++
Sbjct: 285 FLATGLVDFYAKCGFIDTAMEIFE-LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVS 343
Query: 327 YGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGEL 381
G++ + +++ ++ G + S +++++ LF++M + + M + + G +
Sbjct: 344 SGIK-PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLI 402
Query: 382 DEAVKLFD---KTKGERNS-VTWNSMMSG 406
+EA ++ + K G R + W+ ++ G
Sbjct: 403 EEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 146/345 (42%), Gaps = 51/345 (14%)
Query: 27 LRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDE 86
L D P V++ N+ I K E+ AR +FD MPLR + SWN++ISGY+Q E
Sbjct: 174 LFDENPQR-DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE 232
Query: 87 ALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY 146
A+ L M +K + ++ + LS+CA+SG GK +H + + + L+
Sbjct: 233 AIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVD 292
Query: 147 FCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTL 206
F +C I A +FE D W+ M++G M GN
Sbjct: 293 FYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLA---MHGNG------------------ 331
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
E +D FR M S + P+ T V+ +G H+G V + D
Sbjct: 332 -----------ELTVDYFRKMVSSGIKPDGVTFISVL-----VGCSHSGLVDEARNLFDQ 375
Query: 267 L----DFDNSIG--GALAEFYCDRDAIDDAKRVYESM----GGEACLNVANSLIGGLILM 316
+ D + + G +A+ I++A + E M G L + L+GG +
Sbjct: 376 MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIH 435
Query: 317 GRIEEAELIFYGLRETNPIS---YNLMIKGYAMSSQIEKSKRLFE 358
G IE AE ++ +P Y +M++ YA + + E+ ++ E
Sbjct: 436 GNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVRE 480
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 164/614 (26%), Positives = 287/614 (46%), Gaps = 63/614 (10%)
Query: 84 YDEALALASFMHRSCVKLNEISFSAVLSS----CA-RSGSLFLGKQVHSLLLKSGFEKFG 138
YDEAL L S L F+A+L S CA + LG Q+H L LK+G
Sbjct: 26 YDEALRLYKLKIHS---LGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAG----- 77
Query: 139 LVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR 198
D + V+ + ++S Y + +F +M R
Sbjct: 78 --------------------------ADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHR 111
Query: 199 DVVAWTTLISGYARREDGC-ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGK 256
D V++ ++I+ +DG A+ L + M +P + ++ +C R+G+ +
Sbjct: 112 DTVSYCSIINSCC--QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVAR 169
Query: 257 VVHGLCIKDG-LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA-NSLIGGLI 314
+ H L + D + + AL + Y D A V++ M E V+ ++I G +
Sbjct: 170 MFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQM--EVKNEVSWTAMISGCV 227
Query: 315 LMGRIEEAELIFYGLRETN--PISYNLMI---------KGYAMSSQIEKSKRLFEKMAPK 363
E +F ++ N P L+ G ++ +I A +
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADE 287
Query: 364 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
LT+ +++Y + G + + LF+ +K R+ V W+SM+SGY G SE + L M
Sbjct: 288 RLTA--AFMTMYCRCGNVSLSRVLFETSK-VRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHL 483
R+ ++ + T + ACT+ +H+ + K F +++ +G AL+D Y+KCG L
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSL 404
Query: 484 ADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
+ A+ F + ++ +W+++IN Y HG GSE++ +F+ M+ G + F+AILSAC
Sbjct: 405 SAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
+HAGL+ + IF + Y + T+EHY C ++LLGR G++ +A E MP++ I
Sbjct: 465 NHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARI 523
Query: 604 WGALLNASWFWKDIEV-GERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQ 662
W +LL+A ++V G+ A +L +P+ + +V+LS ++ G + +R+ +Q
Sbjct: 524 WSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQ 583
Query: 663 SLELRKDPGCSWIE 676
+L K G S IE
Sbjct: 584 RRKLNKCYGFSKIE 597
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 231/536 (43%), Gaps = 37/536 (6%)
Query: 72 NTMISGYSQWGR-YDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
N++IS Y+++ R Y +HR + +S+ ++++SC + G L+ ++ +
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHR-----DTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL-----RDGNHVLWSLMLSG-YVQRDM 184
GF + ++LL C R + +F L R VL S L Y++ D
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 185 MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
A +F +M V++ V+WT +ISG ++ E +DLFR M+R + PN TL V+
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNY-EMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 245 ICARLG-ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
C L K +HG + G D + A YC + ++ ++E+ +
Sbjct: 260 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVV 319
Query: 304 NVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEK 359
+ +S+I G G E + +R E N ++ ++ S+ + + + +
Sbjct: 320 -MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 360 MAPKNLTSL----NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSE 415
+ S N +I +Y+K G L A ++F + E++ V+W+SM++ Y +G SE
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGHGSE 437
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
AL+++ M + + F + AC ++ Q + K + ++
Sbjct: 438 ALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYIN 497
Query: 476 FYSKCGHLADA-QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAA 534
+ G + DA + + P+ W++L++ HG + + + L++ N A
Sbjct: 498 LLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPA 557
Query: 535 TFVAILSACSHAGLLNDGLEIFHSMQ-----ICY---RVTPTIEHYTCVVDLLGRS 582
+V + + +G + E+ MQ CY ++ P ++ + D G+S
Sbjct: 558 NYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ----IEDYQGKS 609
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 169/409 (41%), Gaps = 44/409 (10%)
Query: 21 RLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQ 80
R+F L+ E V+ + + K + A A H+FD+M ++ SW MISG
Sbjct: 169 RMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVA 228
Query: 81 WGRYDEALALASFMHRSCVKLNEISFSAVLSSCAR--SGSLFLGKQVHSLLLKSGFEKFG 138
Y+ + L M R ++ N ++ +VL +C GS L K++H + G
Sbjct: 229 NQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGS-SLVKEIHGFSFRHGCHADE 287
Query: 139 LVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR 198
+ +A + RC + + ++FE + + V+WS M+SGY +
Sbjct: 288 RLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAE----------------- 330
Query: 199 DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVV 258
C ++L MR+ + N TL ++ C L V
Sbjct: 331 ---------------TGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 259 HGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGR 318
H +K G +G AL + Y ++ A+ V+ + E L +S+I L G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINAYGLHGH 434
Query: 319 IEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLNT 370
EA IF G+ E + +++ ++ + +E+++ +F + P L
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 494
Query: 371 MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKL 419
I++ + G++D+A ++ + ++ W+S++S +G+ A K+
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRST--FSVLFRACTSLCSFQQ-- 450
R ++ + + G + + + EAL+LY +L + HS T F+ + + C+FQQ
Sbjct: 8 RLNLELGNKLKGLVSDQFYDEALRLY----KLKI-HSLGTNGFTAILPSVIKACAFQQEP 62
Query: 451 ---GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
G LH K + V +L+ Y+K ++ F + + ++ ++IN
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC-YRVT 566
GL E++ L + M G +P + ++L+ C+ G + +FH++ + R+
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQ 182
Query: 567 PTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGE---RA 623
++ T +VD+ + A +QM ++ + V W A+++ ++ E+G RA
Sbjct: 183 ESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNE-VSWTAMISGCVANQNYEMGVDLFRA 241
Query: 624 AEKLFSLDPNPISGFVIL 641
++ +L PN ++ +L
Sbjct: 242 MQRE-NLRPNRVTLLSVL 258
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 185/344 (53%), Gaps = 1/344 (0%)
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKT 391
+NP ++ Y + +++LF+++ +N N MIS Y+ G++ EAV+L++
Sbjct: 81 SNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM 140
Query: 392 KGERNSVTWNSMMSGYIHNGQHS-EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
N ++N+++ G + S A++ Y M + T L AC+++ +F+
Sbjct: 141 DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRL 200
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAY 510
+ +H++ + + + + + LV+ Y +CG + Q F S+ +V AW++LI+ YA
Sbjct: 201 IKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYAL 260
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
HG ++ F+ M + V P+ F+ +L ACSHAGL ++ L F MQ Y + + +
Sbjct: 261 HGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD 320
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSL 630
HY+C+VD+L R GR +EA + I MP + WGALL A + +IE+ E AA +L +
Sbjct: 321 HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMV 380
Query: 631 DPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSW 674
+P + +V+L +Y +GR + +R +++ ++ PG SW
Sbjct: 381 EPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 164/356 (46%), Gaps = 16/356 (4%)
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRS-CVKLNEISFSAVLSSCARSGSLFLGKQVHSL 128
S +S Y+ G +++AL L MH S + L+ FS L SCA + LG VH+
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 129 LLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNA 188
+KS F VG ALL +C + A +F+E+ N V+W+ M+S Y + A
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 189 MDLFGKMPV-RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICA 247
++L+ M V + ++ +I G EDG RA++ +R M PN TL ++ C+
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 248 RLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVAN 307
+GA K +H ++ ++ + L E Y +I + V++SM + +
Sbjct: 194 AIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV-AWS 252
Query: 308 SLIGGLILMGRIEEAELIF--YGLRETNP--ISYNLMIKGYAMSSQIEKSKRLFEKM--- 360
SLI L G E A F L + P I++ ++K + + +++ F++M
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 361 ----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
A K+ S ++ V S+ G +EA K+ + + TW +++ + G+
Sbjct: 313 YGLRASKDHYS--CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 38/280 (13%)
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRR-LSVDHSRSTFSVLFRACTSLCSFQQGQLLHA 456
++ +S Y + G H +AL L++ M ++ FS+ ++C + G +HA
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 457 HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSE 516
H K+ F +N +VG AL+D Y KC ++ A++ F I N W A+I+ Y + G E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 517 SILLFRSM-----------LVQGVL----------------------PNAATFVAILSAC 543
++ L+ +M +++G++ PN T +A++SAC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
S G EI HS + P + + +V+ GR G + + + M + D V
Sbjct: 193 SAIGAFRLIKEI-HSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-DRDVVA 250
Query: 604 WGALLNASWFWKDIEVGERAAE--KLFSLDPNPISGFVIL 641
W +L++A D E + + +L + P+ I+ +L
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL 290
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 141/350 (40%), Gaps = 79/350 (22%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFM------------------ 94
++ AR +FDE+P R WN MIS Y+ G+ EA+ L M
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 95 -----------HRSCV----KLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGL 139
+R + K N I+ A++S+C+ G+ L K++HS ++ E
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ 218
Query: 140 VGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRD 199
+ S L+ RC I +LVF+ + D + V WS
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS-------------------------- 252
Query: 200 VVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVH 259
+LIS YA D E AL F+ M ++V P++ V++ C+ HAG
Sbjct: 253 -----SLISAYALHGDA-ESALKTFQEMELAKVTPDDIAFLNVLKACS-----HAGLADE 301
Query: 260 GLCIKDGLDFDNSIGGALAEFYCDRDAI------DDAKRVYESMGGEACLNVANSLIGGL 313
L + D + + + C D + ++A +V ++M + +L+G
Sbjct: 302 ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 314 ILMGRIEEAELIFYGL---RETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
G IE AE+ L NP +Y L+ K Y + E+++RL KM
Sbjct: 362 RNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKM 411
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 192/369 (52%), Gaps = 5/369 (1%)
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYS 376
G++ + I +G + P+ +LM Y ++ +K+LF ++ +++ S N++I+
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLM-HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMV 195
Query: 377 KNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
+NG++ A KLFD+ ++N ++WN M+S Y+ ++ L+ M R + ST
Sbjct: 196 RNGDVLAAHKLFDEMP-DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLV 254
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+L AC ++G+ +HA L +T ++V + TAL+D Y KC + A+R F S+
Sbjct: 255 LLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR 314
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
N W +I + HG + LF +M+ + P+ TFV +L C+ AGL++ G +
Sbjct: 315 NKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY 374
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE---ADGVIWGALLNASWF 613
M +++ P H C+ +L +G +EAEE + +P E + W LL++S F
Sbjct: 375 SLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRF 434
Query: 614 WKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
+ +GE A+ L DP + +L N+Y++ GRW +R+ ++ ++ + PGC
Sbjct: 435 TGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCG 494
Query: 674 WIELNNNIH 682
++L +H
Sbjct: 495 LVDLKEIVH 503
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 148/337 (43%), Gaps = 41/337 (12%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
++S N IA + G++ A +FDEMP + + SWN MIS Y +++L M R
Sbjct: 184 IVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVR 243
Query: 97 SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
+ + NE + +L++C RS L G+ VH+ L+++ ++ +AL+ +C +G
Sbjct: 244 AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGL 303
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
A +F+ L N V W++M+ + + R E G
Sbjct: 304 ARRIFDSLSIRNKVTWNVMILAHCL----------------------------HGRPEGG 335
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG- 275
L+LF M + P+E T V+ CAR G + G+ + L + D + G
Sbjct: 336 ----LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV-DEFQIKPNFGHQ 390
Query: 276 -ALAEFYCDRDAIDDAKRVYESMGGEACLNVAN---SLIGGLILMGRIEEAELIFYGLRE 331
+A Y ++A+ +++ E + +L+ G E I L E
Sbjct: 391 WCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIE 450
Query: 332 TNPIS---YNLMIKGYAMSSQIEKSKRLFEKMAPKNL 365
T+P++ Y+L++ Y+++ + E R+ E + + +
Sbjct: 451 TDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKI 487
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 147/318 (46%), Gaps = 24/318 (7%)
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+F +++S ++ + GK H +K G ++ V ++L++ C + A+ +F E+
Sbjct: 120 TFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEI 179
Query: 165 RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
+ V W+ +++G V+ + A LF +MP +++++W +IS Y + ++ LF
Sbjct: 180 PKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP-GVSISLF 238
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
R M R+ NE TL ++ C R L G+ VH I+ L+ I AL + Y
Sbjct: 239 REMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKC 298
Query: 285 DAIDDAKRVYESMGGEACLNVANSLIGGLILM---------GRIEEAELIFYGLRETNPI 335
+ A+R+++S L++ N + ++++ G +E E + G+ + +
Sbjct: 299 KEVGLARRIFDS------LSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLN-----TMISVYSKNG---ELDEAVKL 387
++ ++ G A + + + + + M + N M ++YS G E +EA+K
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 388 FDKTKGERNSVTWNSMMS 405
S W +++S
Sbjct: 413 LPDEDVTPESTKWANLLS 430
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 138/340 (40%), Gaps = 48/340 (14%)
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
++AL + + R +P+ +T +I + + +GK+ HG IK G D + +L
Sbjct: 100 KQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSL 159
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISY 337
Y A+D AK+++ + ++ NS+I G++ G + A +F + + N IS+
Sbjct: 160 MHMYTCCGALDLAKKLFVEIPKRDIVS-WNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNL-------------------------------- 365
N+MI Y ++ S LF +M
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 366 TSLNT-------MISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALK 418
T LN+ +I +Y K E+ A ++FD + RN VTWN M+ + +G+ L+
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVGLARRIFD-SLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 419 LYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGT--ALVDF 476
L+ M + TF + C QGQ ++ L FQ G + +
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS-LMVDEFQIKPNFGHQWCMANL 396
Query: 477 YSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHG 512
YS G +A+ + ++ +P W L++ + G
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/611 (26%), Positives = 276/611 (45%), Gaps = 60/611 (9%)
Query: 113 CARSGSLFLGKQVHSLL-LKSGFEKFGLVGSALLYFCVRCCGIGE----AELVFEELRDG 167
C G L+ + SLL +SG +F L SA L C G E +L + G
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLL--STCVGFNEFVPGQQLHAHCISSG 113
Query: 168 ---NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
+ VL +++ Y +++ A + + + W LI Y R + + ++ ++
Sbjct: 114 LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR-FQESVSVY 172
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
+ M + +EFT VI+ CA L G+VVHG + + AL Y
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 285 DAIDDAKRVYESM----------------------------------GGEACLNVANSLI 310
+D A+R+++ M G EA + N++
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 311 GGLILMGRIEEAELIFYGLRETN-PISYNLMIKGYAMSSQIEKSK--RLFEKMAPKNLT- 366
GG + G A G+R N I MI G S I K ++F + ++ +
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 367 ------SLNTMISVYSKNGELDEAVKLFDKTKGERNSV-TWNSMMSGYIHNGQHSEALKL 419
N++I++YS+ +L A +F + E NS+ TWNS++SG+ +N + E L
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISGFAYNERSEETSFL 410
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH-LSKTPFQANVYVGTALVDFYS 478
M + T + + + + Q G+ H + L + ++ + + +LVD Y+
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
K G + A+R F S+ + +T+LI+GY G G ++ F+ M G+ P+ T VA
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+LSACSH+ L+ +G +F M+ + + +EHY+C+VDL R+G L +A + + +P E
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEK-LFSLDPNPISGFVILSNMYAILGRWGQKTTI 657
+ LL A + +GE AA+K L P + +++L++MYA+ G W + T+
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
Query: 658 RKRLQSLELRK 668
+ L L ++K
Sbjct: 651 KTLLSDLGVQK 661
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 213/481 (44%), Gaps = 28/481 (5%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L EA+ + + + WN +I Y + R+ E++++ M ++ +E ++ +V+ +
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA 193
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
CA G+ VH + S V +AL+ R + A +F+ + + + V W
Sbjct: 194 CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTLISGYARREDGCERALDLFRCMR 228
+ +++ Y + +G A L +M + V V W T I+G AL+ MR
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT-IAGGCLEAGNYIGALNCVVGMR 312
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD---GLDFDNSIGGALAEFYCDRD 285
V + ++ C+ +GAL GKV H L I+ D DN + +L Y
Sbjct: 313 NCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCS 371
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLM 340
+ A V++ + + L+ NS+I G R EE E++ G N I+ +
Sbjct: 372 DLRHAFIVFQQVEANS-LSTWNSIISGFAYNERSEETSFLLKEMLLSGF-HPNHITLASI 429
Query: 341 IKGYAMSSQIEKSKR----LFEKMAPKN-LTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
+ +A ++ K + + + K+ L N+++ +Y+K+GE+ A ++FD + +R
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KR 488
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
+ VT+ S++ GY G+ AL + M R + T + AC+ ++G L
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 456 A---HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
H+ + Y + +VD Y + G+L A+ F +I + P+ A L+ H
Sbjct: 549 TKMEHVFGIRLRLEHY--SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 512 G 512
G
Sbjct: 607 G 607
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 180/411 (43%), Gaps = 48/411 (11%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
H ++ N I+ + G++ AR +FD M R SWN +I+ Y+ + EA L
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGK------------QVHSLLLKSGFEKFGLV 140
M+ S V+ + ++++ + C +G+ ++G ++ S+ + +G + +
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGN-YIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 141 GS---ALLYFC--VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
G+ ++ C +R C D ++V SL ++ Y + + +A +F ++
Sbjct: 334 GALKWGKVFHCLVIRSCSFSH---------DIDNVRNSL-ITMYSRCSDLRHAFIVFQQV 383
Query: 196 PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
+ W ++ISG+A E E + L + M S PN TL ++ + AR+G L G
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 256 KVVHGLCI-----KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
K H + KD L NS L + Y I AKRV++SM + SLI
Sbjct: 443 KEFHCYILRRQSYKDCLILWNS----LVDMYAKSGEIIAAKRVFDSMRKRDKVTYT-SLI 497
Query: 311 GGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK--- 363
G +G+ E A F + + + ++ ++ + S+ + + LF KM
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 364 --NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
L + M+ +Y + G LD+A +F E +S +++ + +G
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/611 (26%), Positives = 276/611 (45%), Gaps = 60/611 (9%)
Query: 113 CARSGSLFLGKQVHSLL-LKSGFEKFGLVGSALLYFCVRCCGIGE----AELVFEELRDG 167
C G L+ + SLL +SG +F L SA L C G E +L + G
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLL--STCVGFNEFVPGQQLHAHCISSG 113
Query: 168 ---NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLF 224
+ VL +++ Y +++ A + + + W LI Y R + + ++ ++
Sbjct: 114 LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR-FQESVSVY 172
Query: 225 RCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR 284
+ M + +EFT VI+ CA L G+VVHG + + AL Y
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 285 DAIDDAKRVYESM----------------------------------GGEACLNVANSLI 310
+D A+R+++ M G EA + N++
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 311 GGLILMGRIEEAELIFYGLRETN-PISYNLMIKGYAMSSQIEKSK--RLFEKMAPKNLT- 366
GG + G A G+R N I MI G S I K ++F + ++ +
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 367 ------SLNTMISVYSKNGELDEAVKLFDKTKGERNSV-TWNSMMSGYIHNGQHSEALKL 419
N++I++YS+ +L A +F + E NS+ TWNS++SG+ +N + E L
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISGFAYNERSEETSFL 410
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH-LSKTPFQANVYVGTALVDFYS 478
M + T + + + + Q G+ H + L + ++ + + +LVD Y+
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 479 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
K G + A+R F S+ + +T+LI+GY G G ++ F+ M G+ P+ T VA
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
+LSACSH+ L+ +G +F M+ + + +EHY+C+VDL R+G L +A + + +P E
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEK-LFSLDPNPISGFVILSNMYAILGRWGQKTTI 657
+ LL A + +GE AA+K L P + +++L++MYA+ G W + T+
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
Query: 658 RKRLQSLELRK 668
+ L L ++K
Sbjct: 651 KTLLSDLGVQK 661
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 213/481 (44%), Gaps = 28/481 (5%)
Query: 53 LAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSS 112
L EA+ + + + WN +I Y + R+ E++++ M ++ +E ++ +V+ +
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA 193
Query: 113 CARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLW 172
CA G+ VH + S V +AL+ R + A +F+ + + + V W
Sbjct: 194 CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTLISGYARREDGCERALDLFRCMR 228
+ +++ Y + +G A L +M + V V W T I+G AL+ MR
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT-IAGGCLEAGNYIGALNCVVGMR 312
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKD---GLDFDNSIGGALAEFYCDRD 285
V + ++ C+ +GAL GKV H L I+ D DN + +L Y
Sbjct: 313 NCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCS 371
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLM 340
+ A V++ + + L+ NS+I G R EE E++ G N I+ +
Sbjct: 372 DLRHAFIVFQQVEANS-LSTWNSIISGFAYNERSEETSFLLKEMLLSGF-HPNHITLASI 429
Query: 341 IKGYAMSSQIEKSKR----LFEKMAPKN-LTSLNTMISVYSKNGELDEAVKLFDKTKGER 395
+ +A ++ K + + + K+ L N+++ +Y+K+GE+ A ++FD + +R
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KR 488
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
+ VT+ S++ GY G+ AL + M R + T + AC+ ++G L
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 456 A---HLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYH 511
H+ + Y + +VD Y + G+L A+ F +I + P+ A L+ H
Sbjct: 549 TKMEHVFGIRLRLEHY--SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIH 606
Query: 512 G 512
G
Sbjct: 607 G 607
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 180/411 (43%), Gaps = 48/411 (11%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
H ++ N I+ + G++ AR +FD M R SWN +I+ Y+ + EA L
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGK------------QVHSLLLKSGFEKFGLV 140
M+ S V+ + ++++ + C +G+ ++G ++ S+ + +G + +
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGN-YIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 141 GS---ALLYFC--VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM 195
G+ ++ C +R C D ++V SL ++ Y + + +A +F ++
Sbjct: 334 GALKWGKVFHCLVIRSCSFSH---------DIDNVRNSL-ITMYSRCSDLRHAFIVFQQV 383
Query: 196 PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
+ W ++ISG+A E E + L + M S PN TL ++ + AR+G L G
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 256 KVVHGLCI-----KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLI 310
K H + KD L NS L + Y I AKRV++SM + SLI
Sbjct: 443 KEFHCYILRRQSYKDCLILWNS----LVDMYAKSGEIIAAKRVFDSMRKRDKVTYT-SLI 497
Query: 311 GGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK--- 363
G +G+ E A F + + + ++ ++ + S+ + + LF KM
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 364 --NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
L + M+ +Y + G LD+A +F E +S +++ + +G
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 189/341 (55%), Gaps = 6/341 (1%)
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVT 399
++ Y + + + ++F++M +N + N MI+ + G+ ++A+ +K R V+
Sbjct: 164 LVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN-RTVVS 222
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRL-SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
W +++ GY + EA+ L+ M ++ + T + A +L + +HA++
Sbjct: 223 WTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYV 282
Query: 459 SKTPF-QANVYVGTALVDFYSKCGHLADAQRSFTSIFS--PNVAAWTALINGYAYHGLGS 515
K F ++ V +L+D Y+KCG + A + F I + N+ +WT +I+ +A HG+G
Sbjct: 283 GKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGK 342
Query: 516 ESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG-LEIFHSMQICYRVTPTIEHYTC 574
E++ +F+ M G+ PN T +++L+ACSH GL + LE F++M Y++TP ++HY C
Sbjct: 343 EAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGC 402
Query: 575 VVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNP 634
+VD+L R GRL+EAE+ ++PIE V+W LL A + D E+ ER KL L+ +
Sbjct: 403 LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSH 462
Query: 635 ISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCSWI 675
+V++SN++ GR+ RK++ + K PG S +
Sbjct: 463 GGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 170/387 (43%), Gaps = 23/387 (5%)
Query: 34 HPHVISTNISIAHRAK-TGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALAS 92
H H ++ + H+ + +G+L +F+ + LR S T + Y + + + L S
Sbjct: 57 HSHFTTSGFLLLHQKQNSGKL----FLFNPL-LRCYSLGETPLHAYFLYDQL-QRLHFLS 110
Query: 93 FMHRSCVKLNEISFSAVL--SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
++S + ++ +L SS R SL LG +H L LK GFE V +AL+ +
Sbjct: 111 DHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLV 170
Query: 151 CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGY 210
+ +A VF+E+ + N V W++M++G A+ KMP R VV+WTT+I GY
Sbjct: 171 GGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGY 230
Query: 211 ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG-LDF 269
AR + E L R + + PNE T+ ++ LG L VH K G +
Sbjct: 231 ARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPC 290
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVY-ESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
D + +L + Y I A + + E G L ++I + G +EA +F
Sbjct: 291 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 350
Query: 329 LR----ETNPISYNLMIKGYAMSSQIEKSKRLF-------EKMAPKNLTSLNTMISVYSK 377
+ + N ++ ++ + E+ F K+ P ++ ++ + +
Sbjct: 351 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITP-DVKHYGCLVDMLRR 409
Query: 378 NGELDEAVKLFDKTKGERNSVTWNSMM 404
G L+EA K+ + E +V W ++
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVVWRMLL 436
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 2/307 (0%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
+ ++ +Y G+L A KLFD R+SV + +M GY+ G+ L ++ M
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMP-VRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGF 231
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
L AC L + + G+ +H + + +G A+ D Y KC L A
Sbjct: 232 ALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHT 291
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F ++ +V +W++LI GY G S LF ML +G+ PNA TF+ +LSAC+H GL
Sbjct: 292 VFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGL 351
Query: 549 LNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALL 608
+ F MQ Y + P ++HY V D + R+G L+EAE+F+ MP++ D + GA+L
Sbjct: 352 VEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVL 410
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
+ + ++EVGER A +L L P S +V L+ +Y+ GR+ + ++R+ ++ ++ K
Sbjct: 411 SGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 470
Query: 669 DPGCSWI 675
PGCS I
Sbjct: 471 VPGCSSI 477
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 166/379 (43%), Gaps = 42/379 (11%)
Query: 37 VISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHR 96
V+S+ + +A+ + +F MP R + SWN +I +S+ G +++ L M R
Sbjct: 67 VLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWR 126
Query: 97 -SCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIG 155
SCV+ ++ + +L +C+ S G +H L LK GF V SAL+ V +
Sbjct: 127 ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLL 186
Query: 156 EAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARRED 215
A +F+++ + VL++ M GYVQ+ G AM
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQ---GEAM-------------------------- 217
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
L +FR M S + + ++ C +LGAL GK VHG CI+ ++G
Sbjct: 218 ---LGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGN 274
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIG----GLILMGRIEEAELIFYGLRE 331
A+ + Y +D A V+ +M ++ ++ ++G G ++M E++ G+ E
Sbjct: 275 AITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI-E 333
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKL 387
N +++ ++ A +EKS F M N L ++ S+ G L+EA K
Sbjct: 334 PNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKF 393
Query: 388 FDKTKGERNSVTWNSMMSG 406
+ + + +++SG
Sbjct: 394 LEDMPVKPDEAVMGAVLSG 412
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLS-VDHSRSTFSVLFRACTSLCSFQQGQL 453
RN +WN ++ + +G S+++ L++ M R S V T ++ RAC++ + G L
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
+H K F ++++V +ALV Y G L A++ F + + +TA+ GY G
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 514 GSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
+ +FR M G ++ V++L AC G L G
Sbjct: 216 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 216/430 (50%), Gaps = 17/430 (3%)
Query: 242 VIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA 301
++ C L A+ G VH L L + I L Y + A V++ M
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 302 CLNVA-NSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIK--GYAMSSQIEKS- 353
A NSLI G +G+ E+A +++ + E + ++ ++K G S QI ++
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 354 -KRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQ 412
+ L ++ ++ LN ++ +Y+K G++ +A +FD ++ V+WNSM++GY+H+G
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYVSWNSMLTGYLHHGL 276
Query: 413 HSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTA 472
EAL ++ M + ++ + S + + SF+ G+ LH + + + + V A
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 473 LVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPN 532
L+ YSK G L A F + + +W A+I+ H S + F M P+
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPD 390
Query: 533 AATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFI 592
TFV++LS C++ G++ DG +F M Y + P +EHY C+V+L GR+G ++EA I
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
Query: 593 NQ-MPIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRW 651
Q M +EA +WGALL A + + ++GE AA++LF L+P+ F +L +Y+ R
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRA 510
Query: 652 GQKTTIRKRL 661
+R+ +
Sbjct: 511 EDVERVRQMM 520
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 12/289 (4%)
Query: 328 GLRETNP-ISYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELD 382
G+ T P I +L+ Y++ + I+ R+ + P NL + ++ +Y+ G +
Sbjct: 86 GISLTEPEIFASLLETCYSLRA-IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAE 144
Query: 383 EAVKLFDK-TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
A ++FD+ +K + + WNS++SGY GQ+ +A+ LY M V R TF + +A
Sbjct: 145 VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKA 204
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAW 501
C + S Q G+ +H L K F +VYV ALV Y+KCG + A+ F I + +W
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSW 264
Query: 502 TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI 561
+++ GY +HGL E++ +FR M+ G+ P+ VAI S + G ++ H I
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQL-HGWVI 320
Query: 562 CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
+ + ++ L + G+L +A +QM +E D V W A+++A
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA 368
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 185/401 (46%), Gaps = 66/401 (16%)
Query: 33 HH---PHVISTNISIAHR-----AKTGELAEARHMFDEMPLRTVS--SWNTMISGYSQWG 82
HH P+++ N+ I+ + A G A +FD M R S +WN++ISGY++ G
Sbjct: 115 HHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELG 174
Query: 83 RYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGS 142
+Y++A+AL M VK + +F VL +C GS+ +G+ +H L+K GF V +
Sbjct: 175 QYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLN 234
Query: 143 ALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA 202
AL+ +C I +A VF+ + ++V W+ ML+GY+ ++
Sbjct: 235 ALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL----------------- 277
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
ALD+FR M ++ + P++ + V+ AR+ + G+ +HG
Sbjct: 278 ---------------HEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWV 319
Query: 263 IKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM------GGEACLNVANSLIGGLILM 316
I+ G++++ S+ AL Y R + A +++ M A ++ + GL
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYF 379
Query: 317 GRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA------PKNLTSLNT 370
++ A + + I++ ++ A + +E +RLF M+ PK +
Sbjct: 380 EQMHRANA------KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK-MEHYAC 432
Query: 371 MISVYSKNGELDEAVKLFDKTKG-ERNSVTWNSMMSG-YIH 409
M+++Y + G ++EA + + G E W +++ Y+H
Sbjct: 433 MVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLH 473
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 164/368 (44%), Gaps = 45/368 (12%)
Query: 7 FCPVRNCCKRVEKFRLFTTLLRD--SEPHHPHVISTNISIAHRAKTGELAEARHMFDEMP 64
F V C + ++ + RD E V N + AK G++ +AR++FD +P
Sbjct: 198 FPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP 257
Query: 65 LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQ 124
+ SWN+M++GY G EAL + M ++ ++ ++++ S+VL AR S G+Q
Sbjct: 258 HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQ 314
Query: 125 VHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDM 184
+H +++ G E V +AL+ + +G+A +F+++ +
Sbjct: 315 LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE------------------ 356
Query: 185 MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
RD V+W +IS +++ +G L F M R+ P+ T V+
Sbjct: 357 -------------RDTVSWNAIISAHSKNSNG----LKYFEQMHRANAKPDGITFVSVLS 399
Query: 245 ICARLGALHAGKVVHGLCIKD-GLDFDNSIGGALAEFYCDRDAIDDA-KRVYESMGGEAC 302
+CA G + G+ + L K+ G+D + Y +++A + + MG EA
Sbjct: 400 LCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAG 459
Query: 303 LNVANSLIGGLILMGRIEEAELI---FYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEK 359
V +L+ L G + E+ + L N ++ L+I+ Y+ + + E +R+ +
Sbjct: 460 PTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQM 519
Query: 360 MAPKNLTS 367
M + L +
Sbjct: 520 MVDRGLET 527
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 188/432 (43%), Gaps = 76/432 (17%)
Query: 188 AMDLFGKMPVRD--VVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRI 245
A ++F +M RD AW +LISGYA E A+ L+ M V P+ FT V++
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQ-YEDAMALYFQMAEDGVKPDRFTFPRVLKA 204
Query: 246 CARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNV 305
C +G++ G+ +H +K+G +D + AL Y I A+ V++ + + ++
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS- 263
Query: 306 ANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN- 364
NS++ G + G + EA IF LM++ ++ S L ++ K+
Sbjct: 264 WNSMLTGYLHHGLLHEALDIF-----------RLMVQNGIEPDKVAISSVLARVLSFKHG 312
Query: 365 ---------------LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH 409
L+ N +I +YSK G+L +A +FD+ ER++V+WN+++S +
Sbjct: 313 RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQML-ERDTVSWNAIISAHSK 371
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
N S LK + M R + TF + C + + G+ L + +SK
Sbjct: 372 N---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE-------- 420
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ-- 527
Y P + + ++N Y G+ E+ SM+VQ
Sbjct: 421 -------YG---------------IDPKMEHYACMVNLYGRAGMMEEAY----SMIVQEM 454
Query: 528 GVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEH-YTCVVDLLGRSGRLK 586
G+ + A+L AC G + G E+ + Q + + P EH + ++ + ++ R +
Sbjct: 455 GLEAGPTVWGALLYACYLHGNTDIG-EV--AAQRLFELEPDNEHNFELLIRIYSKAKRAE 511
Query: 587 EAEEFINQMPIE 598
+ E + QM ++
Sbjct: 512 DVER-VRQMMVD 522
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 255/557 (45%), Gaps = 56/557 (10%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEAL 88
+S P + S IS R + R +FD + V N+M +S+ ++ L
Sbjct: 33 NSLPRQSYWASRIISCCTRLRAPSYY-TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVL 91
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L R + + SF V+ S R G LF +L+ K GF K V + ++
Sbjct: 92 RLYEQRSRCGIMPDAFSFPVVIKSAGRFGILF-----QALVEKLGFFKDPYVRNVIMDMY 146
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
V+ + A VF+++ W++M+SGY + A LF MP DVV+WT +I+
Sbjct: 147 VKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMIT 206
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
G+A+ +D E A F M V+ A+ +G +G +D L
Sbjct: 207 GFAKVKD-LENARKYFDRMPEKSVVS--------------WNAMLSGYAQNGFT-EDALR 250
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
N + R + + + + SL L+ + I+E +
Sbjct: 251 LFNDML---------RLGVRPNETTWVIVISACSFRADPSLTRSLVKL--IDEKRV---- 295
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP-KNLTSLNTMISVYSKNGELDEAVKL 387
N ++ +A I+ ++R+F ++ +NL + N MIS Y++ G++ A +L
Sbjct: 296 --RLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS-----TFSVLFRAC 442
FD T +RN V+WNS+++GY HNGQ + A++ + M +D+ S T + AC
Sbjct: 354 FD-TMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM----IDYGDSKPDEVTMISVLSAC 408
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
+ + G + ++ K + N +L+ Y++ G+L +A+R F + +V ++
Sbjct: 409 GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
L +A +G G E++ L M +G+ P+ T+ ++L+AC+ AGLL +G IF S++
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-- 526
Query: 563 YRVTPTIEHYTCVVDLL 579
P +HY C +DLL
Sbjct: 527 ---NPLADHYAC-MDLL 539
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 187/414 (45%), Gaps = 33/414 (7%)
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
Y + D L L+ R ++P+ F+ VI+ R G L L K G
Sbjct: 80 YFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILF-----QALVEKLGFFK 134
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
D + + + Y ++++ A++V++ + + N +I G G EEA +F +
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSD-WNVMISGYWKWGNKEEACKLFDMM 193
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFD 389
E + +S+ +MI G+A +E +++ F++M K++ S N M+S Y++NG ++A++LF
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF- 252
Query: 390 KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
N M+ + + + + + R +RS ++ L F
Sbjct: 253 -----------NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 450 QGQLLHAH------------LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
+ LL H ++ Q N+ A++ Y++ G ++ A++ F ++ N
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN 361
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIF 556
V +W +LI GYA++G + +I F M+ G P+ T +++LSAC H L G I
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV 421
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNA 610
++ ++ Y ++ + R G L EA+ ++M E D V + L A
Sbjct: 422 DYIR-KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTA 473
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 179/346 (51%), Gaps = 6/346 (1%)
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTK 392
+P ++ Y +E S+++F+ + + + N+++ +NGE+D A + F +
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMP 179
Query: 393 GERNSVTWNSMMSGYIHNGQHSEALKLYVTM---RRLSVDHSRSTFSVLFRACTSL--CS 447
+ V+W ++++G+ G H++AL ++ M R + + +TF + +C +
Sbjct: 180 -VTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGG 238
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 507
+ G+ +H ++ +GTAL+D Y K G L A F I V AW A+I+
Sbjct: 239 IRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISA 298
Query: 508 YAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTP 567
A +G +++ +F M V PN T +AIL+AC+ + L++ G+++F S+ Y++ P
Sbjct: 299 LASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIP 358
Query: 568 TIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGERAAEKL 627
T EHY CVVDL+GR+G L +A FI +P E D + GALL A ++ E+G ++L
Sbjct: 359 TSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQL 418
Query: 628 FSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPGCS 673
L P +V LS A+ W + +RK + +RK P S
Sbjct: 419 IGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 155/339 (45%), Gaps = 44/339 (12%)
Query: 66 RTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV 125
+T +NT+I Y G Y +LAL + M S V+ N ++F +++ + S S+ G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 126 HSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMM 185
H LK GF V ++ + F + + +F+++ + V + +L + M
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 186 GNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCM---RRSEVLPNEFTLDCV 242
A + F +MPV DVV+WTT+I+G++++ +AL +F M R+ + PNE T V
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA-KALMVFGEMIQNERAVITPNEATFVSV 227
Query: 243 IRICARL--GALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGE 300
+ CA G + GK +HG + + ++G AL + Y G+
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMY-----------------GK 270
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
A G +E A IF +R+ ++N +I A + + +++ +FE M
Sbjct: 271 A---------------GDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMM 315
Query: 361 A-----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
P +T L +++ +++ +D ++LF E
Sbjct: 316 KSSYVHPNGITLL-AILTACARSKLVDLGIQLFSSICSE 353
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 38/252 (15%)
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
+ +N+++ Y+ G++ +L L+ M V + TF L +A S S G L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP------------------ 496
H K F + +V T+ V FY + G L +++ F I +P
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 497 -------------NVAAWTALINGYAYHGLGSESILLFRSMLVQG---VLPNAATFVAIL 540
+V +WT +ING++ GL ++++++F M+ + PN ATFV++L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 541 SACSH--AGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE 598
S+C++ G + G +I H + + T T ++D+ G++G L+ A +Q+ +
Sbjct: 229 SSCANFDQGGIRLGKQI-HGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR-D 286
Query: 599 ADGVIWGALLNA 610
W A+++A
Sbjct: 287 KKVCAWNAIISA 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASF 93
+P V++ N + + GE+ A F MP+ V SW T+I+G+S+ G + +AL +
Sbjct: 149 NPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGE 208
Query: 94 M---HRSCVKLNEISFSAVLSSCAR--SGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
M R+ + NE +F +VLSSCA G + LGKQ+H ++ +G+ALL
Sbjct: 209 MIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMY 268
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
+ + A +F+++RD + V AW +IS
Sbjct: 269 GKAGDLEMALTIFDQIRD-------------------------------KKVCAWNAIIS 297
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG-KVVHGLCIKDGL 267
A ++AL++F M+ S V PN TL ++ CAR + G ++ +C + +
Sbjct: 298 ALASNGRP-KQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKI 356
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGG 312
+ G + + + DA +S+ E +V +L+G
Sbjct: 357 IPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA 401
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 145/264 (54%), Gaps = 2/264 (0%)
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS 397
N ++ Y + + +++F+KM +++ S TM+ N +LD A +F++ RN
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP-MRNV 216
Query: 398 VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH 457
V+W +M++ Y+ N + EA +L+ M+ V + T L +A T L S G+ +H +
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 458 LSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSES 517
K F + ++GTAL+D YSKCG L DA++ F + ++A W ++I HG G E+
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 518 ILLFRSMLVQG-VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
+ LF M + V P+A TFV +LSAC++ G + DGL F M Y ++P EH C++
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 577 DLLGRSGRLKEAEEFINQMPIEAD 600
LL ++ +++A + M + D
Sbjct: 397 QLLEQALEVEKASNLVESMDSDPD 420
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 185/361 (51%), Gaps = 18/361 (4%)
Query: 10 VRNCCKRVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS 69
+R C + ++ T +++ + + ++ IS++ + GE A +F+++ +
Sbjct: 27 LRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVS--SSFGETQYASLVFNQLQSPSTF 84
Query: 70 SWNTMISGYSQWGRYDEALALASFM---HRSCVKLNEISFSAVLSSCARSGSLFLGKQVH 126
+WN MI S + EAL L M H+S + ++ +F V+ +C S S+ LG QVH
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQS--QFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 127 SLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMG 186
L +K+GF + L+ +C VF+++ + V W+ ML G V +
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 187 NAMDLFGKMPVRDVVAWTTLISGYA--RREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
+A +F +MP+R+VV+WT +I+ Y RR D A LFR M+ +V PNEFT+ +++
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPD---EAFQLFRRMQVDDVKPNEFTIVNLLQ 259
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
+LG+L G+ VH K+G D +G AL + Y ++ DA++V++ M G++ L
Sbjct: 260 ASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS-LA 318
Query: 305 VANSLIGGLILMGRIEEAELIFYGLR-----ETNPISYNLMIKGYAMSSQIEKSKRLFEK 359
NS+I L + G EEA +F + E + I++ ++ A + ++ R F +
Sbjct: 319 TWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTR 378
Query: 360 M 360
M
Sbjct: 379 M 379
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 48/289 (16%)
Query: 348 SQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSM 403
S + K++ K+ NLT+ + +ISV S GE A +F++ + ++ TWN M
Sbjct: 31 SNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP-STFTWNLM 89
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHS----RSTFSVLFRACTSLCSFQQGQLLHAHLS 459
+ N + EAL L++ M + H + TF + +AC + S + G +H
Sbjct: 90 IRSLSVNHKPREALLLFILMM---ISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAI 146
Query: 460 KTPFQANVYVGTALVDFYSKCG-------------------------------HLADAQR 488
K F +V+ L+D Y KCG L A+
Sbjct: 147 KAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEI 206
Query: 489 SFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGL 548
F + NV +WTA+I Y + E+ LFR M V V PN T V +L A + G
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 549 LNDGLEIFHSMQICYRVTPTIEHY--TCVVDLLGRSGRLKEAEEFINQM 595
L+ G + ++ ++ + T ++D+ + G L++A + + M
Sbjct: 267 LSMGRWVH---DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 244/543 (44%), Gaps = 35/543 (6%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+L +A +F EM PL ++ +N ++S ++ ++D ++L M + + S++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL--- 164
+++ R L L V ++K G+E + S+LL I EA + +++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 165 -RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCER 219
N V ++ ++ G + A+ L +M R D+ + T+++G +R D +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD-IDL 238
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
AL L + M + ++ + +I ++ + G+ + +L
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 280 FYCDRDAIDDAKRVYESMGGEACLN----VANSLIGGLILMGRIEEAELIFYGL--RETN 333
C+ DA R+ M E +N ++LI + G++ EAE ++ + R +
Sbjct: 299 CLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 334 P--ISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKL 387
P +Y+ +I G+ M +++++K +FE M K N+ + NT+I + K ++E ++L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 388 FDKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
F + +R N+VT+N+++ G G A K++ M V T+S+L
Sbjct: 418 F-REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVA 499
++ ++ +L K+ + ++Y +++ K G + D F S+ PNV
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
+T +I+G+ GL E+ LFR M G LPN+ T+ ++ A G E+ M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 560 QIC 562
+ C
Sbjct: 597 RSC 599
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 197/459 (42%), Gaps = 62/459 (13%)
Query: 185 MGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
+ +A+DLFG+M P+ +V + L+S A+ N+F D
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM---------------------NKF--D 97
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM--- 297
VI + R+ L + +D L +C R + A V M
Sbjct: 98 LVISLGERMQNLR-------------ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 144
Query: 298 GGEACLNVANSLIGGLILMGRIEEA----ELIFYGLRETNPISYNLMIKGYAMSSQIEKS 353
G E + +SL+ G RI EA + +F + N +++N +I G + ++ ++
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 354 KRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLF---DKTKGERNSVTWNSMMSG 406
L ++M + +L + T+++ K G++D A+ L +K K E + V + +++
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
+ ++AL L+ M + + T++ L R + + L + + + N
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 467 VYVGTALVDFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFR 522
V +AL+D + K G L +A++ + + P++ +++LING+ H E+ +F
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 523 SMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRS 582
M+ + PN T+ ++ A + +G+E+F M V T+ + T + L ++
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF-QA 443
Query: 583 GRLKEAEEFINQMP---IEADGVIWGALLNASWFWKDIE 618
G A++ +M + D + + LL+ + +E
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 50/265 (18%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS------------------------ 69
+P+V++ + I K G+L EA ++DEM R++
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 70 ---------------SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCA 114
++NT+I G+ + R +E + L M + + N ++++ ++
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 115 RSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR----DGNHV 170
++G + +++ ++ G + S LL + + +A +VFE L+ + +
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALD-LFR 225
+++M+ G + + + DLF + ++ +V+ +TT+ISG+ R+ G + D LFR
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK--GLKEEADALFR 559
Query: 226 CMRRSEVLPNEFTLDCVIRICARLG 250
M+ LPN T + +IR R G
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDG 584
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 109/202 (53%)
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
R F +LF +C +L S + + +H H ++ F+ + + ++ + +C + DA+R F
Sbjct: 236 RECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFD 295
Query: 492 SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
+ ++ +W ++ Y+ +G+G +++ LF M G+ PN TF+ + AC+ G + +
Sbjct: 296 HMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEE 355
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNAS 611
F SM+ + ++P EHY V+ +LG+ G L EAE++I +P E W A+ N +
Sbjct: 356 AFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYA 415
Query: 612 WFWKDIEVGERAAEKLFSLDPN 633
DI++ + E + +DP+
Sbjct: 416 RLHGDIDLEDYMEELMVDVDPS 437
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 369 NTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
N +IS++ + + +A ++FD +++ +W+ MM Y NG +AL L+ M + +
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMV-DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGL 333
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF----QANVYVGTALVDFYSKCGHLA 484
+ TF +F AC ++ ++ LH K + Y+G ++ KCGHL
Sbjct: 334 KPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLG--VLGVLGKCGHLV 390
Query: 485 DAQRSFTSI-FSPNVAAWTALINGYAYHG 512
+A++ + F P W A+ N HG
Sbjct: 391 EAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/555 (21%), Positives = 245/555 (44%), Gaps = 29/555 (5%)
Query: 67 TVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVH 126
TV + T+I G+++ GR D AL+L M S + + + ++ + S + G + + +
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 127 SLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV----LWSLMLSGYVQR 182
+ +G + + ++++ + + EA +FE L V ++ M+ GY
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 183 DMMGNAMDLF----GKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
A L K + V+A+ +++ R+ + AL +F M++ + PN T
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCL-RKMGKVDEALKVFEEMKK-DAAPNLST 379
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+ +I + R G L + K GL + + + C +D+A ++E M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 299 GEACLN---VANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIE 351
+ C SLI GL +GR+++A ++ + + TN I Y +IK + + E
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 352 KSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKLFDKTKGER---NSVTWNSMM 404
++++ M +N L LNT + K GE ++ +F++ K R ++ +++ ++
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
G I G +E +L+ +M+ ++++ + L + F+
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 465 ANVYVGTALVDFYSKCGHLADAQRSFTSIFSP----NVAAWTALINGYAYHGLGSESILL 520
V +++D +K L +A F S NV +++LI+G+ G E+ L+
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 521 FRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLG 580
++ +G+ PN T+ ++L A A +N+ L F SM+ + TP Y +++ L
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-LKCTPNQVTYGILINGLC 738
Query: 581 RSGRLKEAEEFINQM 595
+ + +A F +M
Sbjct: 739 KVRKFNKAFVFWQEM 753
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 119/591 (20%), Positives = 224/591 (37%), Gaps = 83/591 (14%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRYDEALAL 90
P ++ I K L EA MF+ + + ++NTMI GY G++DEA +L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
+ I+++ +L+ + G + +V + K S
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNL----STYNILIDM 386
Query: 151 CCGIGEAELVFEELRDG--------NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR---- 198
C G+ + FE LRD N ++M+ + + A +F +M +
Sbjct: 387 LCRAGKLDTAFE-LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 199 DVVAWTTLISGYAR--REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
D + + +LI G + R D A ++ M S+ N +I+ G G
Sbjct: 446 DEITFCSLIDGLGKVGRVDD---AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 257 VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANS---LIGGL 313
++ I D + + + + ++E + + A S LI GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 314 ILMGRIEEAELIFYGLRETNPI----SYNLMIKGYAMSSQIEKSKRLFEKMAPK----NL 365
I G E +FY ++E + +YN++I G+ ++ K+ +L E+M K +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 366 TSLNTMISVYSKNGELDEAVKLFDKTKGER------------------------------ 395
+ ++I +K LDEA LF++ K +R
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 396 --------NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
N TWNS++ + + +EAL + +M+ L ++ T+ +L +
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTA 503
F + + + K + + T ++ +K G++A+A F + P+ A + A
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLE 554
+I G + ++ LF +G+ + T V +L ND LE
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK----NDCLE 849
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 239/519 (46%), Gaps = 30/519 (5%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
++ +A +F +M P ++ +N ++S ++ +++ ++L M + + ++S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++ R L L V + ++K G+E + S+LL I +A + +++ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 168 NH----VLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCER 219
+ ++ ++ G + A+ L +M R D+V + T+++G +R D +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDL 241
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
AL+L M + + N + +I + + + G+ + +L
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 280 FYCDRDAIDDAKRVYESM-GGEACLNVA--NSLIGGLILMGRIEEAELIFYGL--RETNP 334
C+ DA R+ +M + NV N+LI G++ EAE + + R +P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 335 --ISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLF 388
I+YNL+I G+ M ++++++K++F+ M K N+ + NT+I+ + K +++ V+LF
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 389 DKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
+ +R N+VT+ +++ G+ G A ++ M V T+S+L S
Sbjct: 422 -REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 445 LCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTA 503
++ +L K+ + N+++ +++ K G + +A F S+ P+V +
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+I+G L E+ LFR M G LPN+ T+ ++ A
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 187/462 (40%), Gaps = 54/462 (11%)
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM----PVRDVVAWTTLI 207
CG G E F + LS ++ D +A+DLFG M P +V + L+
Sbjct: 34 CGSGCWERSFASASGDYREILRNRLSDIIKVD---DAVDLFGDMVKSRPFPSIVEFNKLL 90
Query: 208 SGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGL 267
S A+ + E + L M+ + + +T I R L V +K G
Sbjct: 91 SAVAKM-NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEAEL 324
+ D +L YC I DA + + M G + +LI GL L + EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 325 IFYGL--RETNP--ISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLNTMISVYS 376
+ + R P ++Y ++ G I+ + L KM N+ NT+I
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 377 KNGELDEAVKLFDK--TKGER-NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
K ++ AV LF + TKG R N VT+NS+++ + G+ S+A +L M ++ +
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
TF+ L A F++G+L+ A H QRS
Sbjct: 330 TFNALIDA-----FFKEGKLVEAEKL----------------------HEEMIQRSI--- 359
Query: 494 FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGL 553
P+ + LING+ H E+ +F+ M+ + LPN T+ +++ + DG+
Sbjct: 360 -DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
E+F M V T+ YT ++ ++G A+ QM
Sbjct: 419 ELFREMSQRGLVGNTVT-YTTIIQGFFQAGDCDSAQMVFKQM 459
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/553 (21%), Positives = 253/553 (45%), Gaps = 36/553 (6%)
Query: 42 ISIAHRAKTGELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRS 97
ISI +R +L +A ++F +M P ++ ++ ++S ++ ++D ++L M
Sbjct: 52 ISI-NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA 157
+ N ++S +++ R L L V + ++K G+E + ++LL I +A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 158 -ELVFEELRDG---NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISG 209
LV + + G + ++ ++ G + + A+ L +M V+ D+V + +++G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
+R D + AL L + M + ++ P + +I ++ + G+
Sbjct: 231 LCKRGD-IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN----VANSLIGGLILMGRIEEAELI 325
+ +L C+ DA R+ M E +N ++LI + G++ EAE +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 326 FYGL--RETNP--ISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSK 377
+ + R +P +Y+ +I G+ M +++++K +FE M K N+ + NT+I + K
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 378 NGELDEAVKLFDKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
+DE ++LF + +R N+VT+ +++ G+ + A ++ M V
Sbjct: 409 AKRVDEGMELF-REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T+S+L + + ++ +L ++ + ++Y +++ K G + D F S+
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 494 ----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
PNV +T +++G+ GL E+ LFR M +G LP++ T+ ++ A G
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Query: 550 NDGLEIFHSMQIC 562
E+ M+ C
Sbjct: 588 AASAELIREMRSC 600
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 186/434 (42%), Gaps = 47/434 (10%)
Query: 185 MGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
+ +A++LFG M P +V ++ L+S A+ + + + L M+ + N +T
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGE 300
+I R L V +K G + D +L +C + I DA
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV--------- 171
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
SL+G ++ MG + + ++N +I G ++ ++ L ++M
Sbjct: 172 -------SLVGQMVEMGY------------QPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 361 APK----NLTSLNTMISVYSKNGELDEAVKLFDKT---KGERNSVTWNSMMSGYIHNGQH 413
K +L + +++ K G++D A+ L K K E V +N+++ +
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
++AL L+ M + + T++ L R + + L + + + NV +AL
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 474 VDFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
+D + K G L +A++ + + P++ +++LING+ H E+ +F M+ +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
PN T+ ++ A +++G+E+F M V T+ YT ++ ++ A+
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARECDNAQ 451
Query: 590 EFINQMPIEADGVI 603
QM +DGV+
Sbjct: 452 IVFKQMV--SDGVL 463
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 64/272 (23%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALA 89
+P+V++ + I K G+L EA ++DEM R++ +++++I+G+ R DEA
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY--- 146
+ M N ++++ ++ ++ + G ++ + + GLVG+ + Y
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-----SQRGLVGNTVTYTTL 437
Query: 147 ----FCVRCCGIGEAELVFEEL-RDG---NHVLWSLMLSG---------------YVQRD 183
F R C A++VF+++ DG + + +S++L G Y+QR
Sbjct: 438 IHGFFQAREC--DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 184 MMG------NAM--------------DLFGKMPVR----DVVAWTTLISGYARREDGCER 219
M N M DLF + ++ +VV +TT++SG+ R+ G +
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK--GLKE 553
Query: 220 ALD-LFRCMRRSEVLPNEFTLDCVIRICARLG 250
D LFR M+ LP+ T + +IR R G
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 220/521 (42%), Gaps = 41/521 (7%)
Query: 121 LGKQVHSLLLKSGFEKFGLVGSA-LLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGY 179
+ K V LL++G + L+ L FC E F D N + SG
Sbjct: 13 VSKFVQPRLLETGTLRIALINCPNELSFC--------CERGFSAFSDRNLSYRERLRSGL 64
Query: 180 VQRDMMGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPN 235
V +A+DLF M P+ V+ ++ L S A+ + + L L + M + N
Sbjct: 65 VDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQ-YDLVLALCKQMELKGIAHN 122
Query: 236 EFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE 295
+TL +I R L G IK G + + L C + +A + +
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 296 ---SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSS 348
MG + L N+L+ GL L G+ EA L+ + E N ++Y ++ S
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 349 QIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKT--KG-ERNSVTWN 401
Q + L KM +N+ + +I K+G LD A LF++ KG N +T+N
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
++ G+ + G+ + KL M + ++ + TFSVL + ++ + LH +
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSES 517
+ T+L+D + K HL A + + S PN+ + LINGY +
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ LFR M ++GV+ + T+ ++ G LN E+F M + +V P I Y ++D
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM-VSRKVPPNIVTYKILLD 481
Query: 578 LL---GRSGRLKEAEEFINQMPIEAD----GVIWGALLNAS 611
L G S + E E I + +E D +I + NAS
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 32/378 (8%)
Query: 9 PVRNCCKRVEKFRLFTTLLRDSEPHHPHV--ISTNISIAHRAKTGELAEARHMFDEMPLR 66
PV N + + L LLR E + + + +I I K G L A ++F+EM ++
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 67 TVSS----WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLG 122
+++ +N +I G+ GR+D+ L M + + N ++FS ++ S + G L
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 123 KQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA----ELVFEELRDGNHVLWSLMLSG 178
+++H ++ G + ++L+ + + +A +L+ + D N ++++++G
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVA----WTTLISGYARREDGCER-----ALDLFRCMRR 229
Y + + + + ++LF KM +R VVA + TLI G+ CE A +LF+ M
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF------CELGKLNVAKELFQEMVS 466
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
+V PN T ++ G + K ++ D I + C+ +DD
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 290 AKRVYESM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIK 342
A ++ S+ G + + N +IGGL G + EAEL+F + E + +YN++I+
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 343 GYAMSSQIEKSKRLFEKM 360
+ KS +L E++
Sbjct: 587 AHLGDGDATKSVKLIEEL 604
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 126/582 (21%), Positives = 240/582 (41%), Gaps = 77/582 (13%)
Query: 57 RHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARS 116
R M PL TV ++ + S ++ +YD LAL M + N + S +++ R
Sbjct: 77 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 136
Query: 117 GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEA-ELVFEELRDG-------- 167
L L ++K G+E + S L+ + EA ELV + G
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196
Query: 168 NHVLWSLMLSGYVQRDM-MGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRC 226
N ++ L LSG M + + M +G P + V + +++ + A++L R
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQP--NAVTYGPVLNVMC-KSGQTALAMELLRK 253
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD------------------ 268
M + +L A+ ++ GLC LD
Sbjct: 254 MEERNI---------------KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 269 --FDNSIGGALAEFYCDRDAIDD-AKRVYESMGGEACLNVA--NSLIGGLILMGRIEEA- 322
++ IGG +C+ DD AK + + + + NV + LI + G++ EA
Sbjct: 299 ITYNILIGG-----FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 323 ----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISV 374
E+I G+ + I+Y +I G+ + ++K+ ++ + M K N+ + N +I+
Sbjct: 354 ELHKEMIHRGI-APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 375 YSKNGELDEAVKLFDKTKGE---RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
Y K +D+ ++LF K ++VT+N+++ G+ G+ + A +L+ M V +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
T+ +L ++ + + K+ + ++ + ++ + DA F
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 492 SI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
S+ P V + +I G G SE+ LLFR M G P+ T+ ++ A G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 548 LLNDGLEIFHSMQIC-YRVTPTIEHYTCVVDLLGRSGRLKEA 588
+++ ++ C + V + V+D+L GRLK++
Sbjct: 593 DATKSVKLIEELKRCGFSVDAST--IKMVIDMLS-DGRLKKS 631
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 192/437 (43%), Gaps = 49/437 (11%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRYDEAL 88
H P +I+ N + +G+ AEA + D+M ++ +++ + G+ A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
L M +KL+ + +S ++ + GSL ++ L + E G+ + + Y
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSL-----DNAFNLFNEMEMKGITTNIITYNI 303
Query: 149 V--RCCGIGEAELVFEELRD-------GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR- 198
+ C G + + LRD N V +S+++ +V+ + A +L +M R
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 199 ---DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG 255
D + +T+LI G+ +E+ ++A + M PN T + +I G A
Sbjct: 364 IAPDTITYTSLIDGFC-KENHLDKANQMVDLMVSKGCDPNIRTFNILIN-----GYCKAN 417
Query: 256 KVVHGLCI-----KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC---LNVAN 307
++ GL + G+ D L + +C+ ++ AK +++ M +
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 308 SLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK 363
L+ GL G E+A IF + E + YN++I G +S+++ + LF + K
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 364 ----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV---TWNSMMSGYIHNGQHSEA 416
+ + N MI K G L EA LF K + + ++ T+N ++ ++ +G +++
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 417 LKLYVTMRR--LSVDHS 431
+KL ++R SVD S
Sbjct: 598 VKLIEELKRCGFSVDAS 614
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/558 (20%), Positives = 244/558 (43%), Gaps = 65/558 (11%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+L +A +F EM P ++ ++ ++S ++ ++D ++L M + N ++S
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL--- 164
+++ R L L V ++K G+E + S+LL I EA + +++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 165 -RDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCER 219
N V ++ ++ G + AM L +M + D+V + +++G +R D +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDL 239
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC----IKDGLDFDNSIG- 274
A +L M + ++ P G L ++ GLC + D L+ +
Sbjct: 240 AFNLLNKMEQGKLEP---------------GVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 275 ----------GALAEFYCDRDAIDDAKRVYESMGGEACLN----VANSLIGGLILMGRIE 320
+L C+ DA R+ M E +N ++LI + G++
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLV 343
Query: 321 EAELIFYGL--RETNP--ISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMI 372
EAE ++ + R +P ++Y+ +I G+ M +++++K++FE M K ++ + NT+I
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 373 SVYSKNGELDEAVKLFDKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSV 428
+ K ++E +++F + +R N+VT+N ++ G G A +++ M V
Sbjct: 404 KGFCKYKRVEEGMEVF-REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 429 DHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQR 488
+ T++ L ++ ++ +L ++ + +Y +++ K G + D
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 489 SFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACS 544
F ++ P+V A+ +I+G+ G E+ LF+ M G LPN+ + ++ A
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 545 HAGLLNDGLEIFHSMQIC 562
G E+ M+ C
Sbjct: 583 RDGDREASAELIKEMRSC 600
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 192/427 (44%), Gaps = 26/427 (6%)
Query: 185 MGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
+ +A+ LFG+M P ++ ++ L+S A+ + + + L M+ + N +T
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM-NKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM--- 297
+I R L V G +K G + + +L YC I +A + + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 298 GGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEK 352
G + N+LI GL L + EA ++ G + + ++Y +++ G +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC-QPDLVTYGVVVNGLCKRGDTDL 239
Query: 353 SKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDK--TKGER-NSVTWNSMMS 405
+ L KM L NT+I K +D+A+ LF + TKG R N VT++S++S
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 406 GYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQA 465
+ G+ S+A +L M ++ TFS L A + + L+ + K
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 466 NVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLF 521
++ ++L++ + L +A++ F + S P+V + LI G+ + E + +F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 522 RSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGR 581
R M +G++ N T+ ++ AG + EIF M + V P I Y ++D L +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDGLCK 478
Query: 582 SGRLKEA 588
+G+L++A
Sbjct: 479 NGKLEKA 485
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVKLF 388
N +Y+++I + SQ+ + + KM N+ +L+++++ Y + + EAV L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 389 DK---TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
D+ T + N+VT+N+++ G + + SEA+ L M T+ V+ L
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG---L 231
Query: 446 CSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALI 505
C L L+K + G L P V + +I
Sbjct: 232 CKRGDTDLAFNLLNKM-----------------EQGKL-----------EPGVLIYNTII 263
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
+G + +++ LF+ M +G+ PN T+ +++S + G +D + M I ++
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKI 322
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWGALLNA 610
P + ++ ++D + G+L EAE+ ++M I+ V + +L+N
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 126/571 (22%), Positives = 249/571 (43%), Gaps = 75/571 (13%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS----WNTMISGYSQWGRYDEALAL 90
P + NI + + E + FD + + VS + T I+ + + G+ +EA+ L
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 91 ASFMHRSCVKLNEISFSAV---LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYF 147
S M + V N ++F+ V L C R F+ K+ +++ G E + S L+
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK---MVERGMEPTLITYSILVKG 339
Query: 148 CVRCCGIGEAELVFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV-- 201
R IG+A V +E+ N ++++ ++ +++ + A+++ M + +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 202 --AWTTLISGYAR--REDGCERALDL-----FRCMRRSE-----VLPNEFTLDCVIRICA 247
+ TLI GY + + D ER L F + S +L + D +R
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 248 RL-------GALHAGKVVHGLC---------------IKDGLDFDNSIGGALAEFYCDRD 285
+ G ++ GLC + G D AL C+
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 286 AIDDAKRVYESMGGEACLN---VANSLIGGLILMGRIEEA-----ELIFYGLRETNPISY 337
+D+A R+ + + G C+ N+LI G +++EA E++ GL+ N +Y
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-YTY 578
Query: 338 NLMIKGYAMSSQIEKSKRLFEK-----MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTK 392
+++I G +++E++ + ++ M P ++ + + MI K +E + FD+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLP-DVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 393 GER---NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
+ N+V +N ++ Y +G+ S AL+L M+ + + +T++ L + + + +
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALI 505
+ +LL + + NV+ TAL+D Y K G + + + S PN +T +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
GYA G +E+ L M +G++P++ T+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 184/446 (41%), Gaps = 64/446 (14%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALAL 90
P+VI N I + G L +A + D M + T S++NT+I GY + G+ D A L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLG---KQVHSLLLKSGFEKFGLVGSALLYF 147
M +N+ SF++V+ C L + V +LL++ GL+ + +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVI--CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 148 CVRCCGIGEAELVFEELRDGNHV---LWSLMLSGYVQRDMMGNAM----DLFGKMPVRDV 200
C EL F+ L G V + +L G + + A ++ G+ V D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 201 VAWTTLISGYARRE----------------------------------DGCERALDLFRC 226
V++ TLISG ++ + E A+ +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
+R+ +LP+ +T +I C + G+ + + + + L YC
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 287 IDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNL 339
+ A + E M G SLI G+ ++ R+EEA+L+F +R E N Y
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGE- 394
+I GY Q+ K + L +M KN+ + MI Y+++G + EA +L ++ + +
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 395 --RNSVTWNSMMSGYIHNGQHSEALK 418
+S+T+ + GY+ G EA K
Sbjct: 781 IVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 188/433 (43%), Gaps = 64/433 (14%)
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
+ DGC ALD+F + + P++ T + ++ R + K G+ D
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVY 261
Query: 273 IGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEA-----EL 324
+ +C +++A +++ M G + N++I GL + GR +EA ++
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 325 IFYGLRETNPISYNLMIKGYAMSSQIEKS----KRLFEKMAPKNLTSLNTMISVYSKNGE 380
+ G+ E I+Y++++KG + +I + K + +K P N+ N +I + + G
Sbjct: 322 VERGM-EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 381 LDEAVKLFD--KTKG-ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV 437
L++A+++ D +KG S T+N+++ GY NGQ A +L M + + ++ +F+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT- 439
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANV-YVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+ +C LL +HL F + + +VG L+ SP
Sbjct: 440 -----SVIC------LLCSHLM---FDSALRFVGEMLL-----------------RNMSP 468
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
T LI+G HG S+++ L+ L +G + + T A+L AG L++ I
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWGALL----- 608
+ V + + T + G+ +L EA F+++M ++ D + L+
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKK-KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 609 -----NASWFWKD 616
A FW D
Sbjct: 588 MNKVEEAIQFWDD 600
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 126/571 (22%), Positives = 249/571 (43%), Gaps = 75/571 (13%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS----WNTMISGYSQWGRYDEALAL 90
P + NI + + E + FD + + VS + T I+ + + G+ +EA+ L
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 91 ASFMHRSCVKLNEISFSAV---LSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYF 147
S M + V N ++F+ V L C R F+ K+ +++ G E + S L+
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK---MVERGMEPTLITYSILVKG 339
Query: 148 CVRCCGIGEAELVFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV-- 201
R IG+A V +E+ N ++++ ++ +++ + A+++ M + +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 202 --AWTTLISGYAR--REDGCERALDL-----FRCMRRSE-----VLPNEFTLDCVIRICA 247
+ TLI GY + + D ER L F + S +L + D +R
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 248 RL-------GALHAGKVVHGLC---------------IKDGLDFDNSIGGALAEFYCDRD 285
+ G ++ GLC + G D AL C+
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 286 AIDDAKRVYESMGGEACLN---VANSLIGGLILMGRIEEA-----ELIFYGLRETNPISY 337
+D+A R+ + + G C+ N+LI G +++EA E++ GL+ N +Y
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-YTY 578
Query: 338 NLMIKGYAMSSQIEKSKRLFEK-----MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTK 392
+++I G +++E++ + ++ M P ++ + + MI K +E + FD+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLP-DVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 393 GER---NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQ 449
+ N+V +N ++ Y +G+ S AL+L M+ + + +T++ L + + + +
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 450 QGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALI 505
+ +LL + + NV+ TAL+D Y K G + + + S PN +T +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
GYA G +E+ L M +G++P++ T+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 184/446 (41%), Gaps = 64/446 (14%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALAL 90
P+VI N I + G L +A + D M + T S++NT+I GY + G+ D A L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLG---KQVHSLLLKSGFEKFGLVGSALLYF 147
M +N+ SF++V+ C L + V +LL++ GL+ + +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVI--CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 148 CVRCCGIGEAELVFEELRDGNHV---LWSLMLSGYVQRDMMGNAM----DLFGKMPVRDV 200
C EL F+ L G V + +L G + + A ++ G+ V D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 201 VAWTTLISGYARRE----------------------------------DGCERALDLFRC 226
V++ TLISG ++ + E A+ +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
+R+ +LP+ +T +I C + G+ + + + + L YC
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 287 IDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNL 339
+ A + E M G SLI G+ ++ R+EEA+L+F +R E N Y
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 340 MIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGE- 394
+I GY Q+ K + L +M KN+ + MI Y+++G + EA +L ++ + +
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 395 --RNSVTWNSMMSGYIHNGQHSEALK 418
+S+T+ + GY+ G EA K
Sbjct: 781 IVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 188/433 (43%), Gaps = 64/433 (14%)
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
+ DGC ALD+F + + P++ T + ++ R + K G+ D
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVY 261
Query: 273 IGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEA-----EL 324
+ +C +++A +++ M G + N++I GL + GR +EA ++
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 325 IFYGLRETNPISYNLMIKGYAMSSQIEKS----KRLFEKMAPKNLTSLNTMISVYSKNGE 380
+ G+ E I+Y++++KG + +I + K + +K P N+ N +I + + G
Sbjct: 322 VERGM-EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 381 LDEAVKLFD--KTKG-ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV 437
L++A+++ D +KG S T+N+++ GY NGQ A +L M + + ++ +F+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT- 439
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANV-YVGTALVDFYSKCGHLADAQRSFTSIFSP 496
+ +C LL +HL F + + +VG L+ SP
Sbjct: 440 -----SVIC------LLCSHLM---FDSALRFVGEMLL-----------------RNMSP 468
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
T LI+G HG S+++ L+ L +G + + T A+L AG L++ I
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWGALL----- 608
+ V + + T + G+ +L EA F+++M ++ D + L+
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKK-KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 609 -----NASWFWKD 616
A FW D
Sbjct: 588 MNKVEEAIQFWDD 600
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 141/607 (23%), Positives = 246/607 (40%), Gaps = 134/607 (22%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMF---DEMPLR-TVSSWNT 73
E +L + ++ + P VI N I K + EA MF EM L+ TV ++NT
Sbjct: 521 EAIKLLSEMMENG--CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
+++G + G+ EA+ L M + N I+F+ + ++ + +L LK
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV-------TLALKML 631
Query: 134 FE--KFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDL 191
F+ G V Y N +++ L+ +G V+ AM
Sbjct: 632 FKMMDMGCVPDVFTY---------------------NTIIFGLVKNGQVKE-----AMCF 665
Query: 192 FGKMP---VRDVVAWTTLISGYARR---EDGCERALD-LFRCMRRSEVLPNEFTLDCVIR 244
F +M D V TL+ G + ED + + L+ C + N F D +
Sbjct: 666 FHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP---ANLFWEDLIGS 722
Query: 245 ICARLGALHAGK-----VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE---- 295
I A G +A V +G+C +DG +SI + + C + + A+ ++E
Sbjct: 723 ILAEAGIDNAVSFSERLVANGIC-RDG----DSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 296 SMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKR 355
+G + L N LIGGL+ IE A+ +F ++ T I
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP------------------- 818
Query: 356 LFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKT---KGERNSVTWNSMMSGYIHNGQ 412
++ + N ++ Y K+G++DE +L+ + + E N++T N ++SG + G
Sbjct: 819 --------DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 413 HSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTA 472
+AL LY + +S F
Sbjct: 871 VDDALDLYYDL----------------------------------MSDRDFSPTACTYGP 896
Query: 473 LVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQG 528
L+D SK G L +A++ F + PN A + LING+ G + LF+ M+ +G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 529 VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
V P+ T+ ++ G +++GL F ++ + P + Y +++ LG+S RL+EA
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 589 EEFINQM 595
N+M
Sbjct: 1016 LVLFNEM 1022
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 143/693 (20%), Positives = 272/693 (39%), Gaps = 86/693 (12%)
Query: 29 DSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRY 84
+ + H P V++ I + K G EA D M L + ++NT+I G + R
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 85 DEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSAL 144
D+AL L M VK ++ + +SG + + G + +A
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 145 LYFCVRCCGIGEAELVFEELRD----GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR-- 198
LY + EA+ +F L+D + V +++M+ Y + + A+ L +M
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 199 --DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGK 256
DV+ +LI+ + D + A +F M+ ++ P T + ++ + G +
Sbjct: 535 EPDVIVVNSLINTL-YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 257 VVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN---VANSLIGGL 313
+ ++ G + L + C D + A ++ M C+ N++I GL
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 314 ILMGRIEEAELIFYGLRE---TNPISYNLMIKGYAMSSQIEKSKRLFEKM------APKN 364
+ G+++EA F+ +++ + ++ ++ G +S IE + ++ P N
Sbjct: 654 VKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 365 LTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
L + + S+ ++ G +D AV ++ + NG + + V +
Sbjct: 714 LFWEDLIGSILAEAG-IDNAVSFSER----------------LVANGICRDGDSILVPII 756
Query: 425 RLSVDHSR-STFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHL 483
R S H+ S LF T Q K P N+ +G L + +
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQ---------PKLP-TYNLLIGGLL-----EADMI 801
Query: 484 ADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI 539
AQ F + S P+VA + L++ Y G E L++ M N T +
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 540 LSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---P 596
+S AG ++D L++++ + +PT Y ++D L +SGRL EA++ M
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 597 IEADGVIWGALLNA-----------SWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMY 645
+ I+ L+N + F + ++ G R K +S +L +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS----------VLVDCL 971
Query: 646 AILGRWGQKTTIRKRLQSLELRKDPGCSWIELN 678
++GR + K L+ L D C + +N
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 197/468 (42%), Gaps = 36/468 (7%)
Query: 168 NHVLWSLMLSGYVQRDMMGNAMDLFGKMPV-RDVVAWTTLISGYARREDGCERALDLFRC 226
N++L +L + G ++ M DL K + RD + T+ + + G ++A R
Sbjct: 122 NYMLEALRVDGKLEE--MAYVFDLMQKRIIKRDTNTYLTIFKSLSVK-GGLKQAPYALRK 178
Query: 227 MRRSEVLPNEFTLDCVI------RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEF 280
MR + N ++ + +I R C ++ ++ G + L +S+ L +
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGF--RPSLQTYSSLMVGLGKR 236
Query: 281 YCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPIS 336
D D++ + E++G + + I L G+I EA I + + + ++
Sbjct: 237 R-DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 337 YNLMIKGYAMSSQIEKSKRLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLF--- 388
Y ++I + +++ +K +FEKM P +T + T++ +S N +LD +VK F
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI-TLLDRFSDNRDLD-SVKQFWSE 353
Query: 389 -DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
+K + VT+ ++ G EA MR + + T++ L +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF----TSIFSPNVAAWTA 503
L ++ + Y +D+Y K G A +F T +PN+ A A
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
+ A G E+ +F + G++P++ T+ ++ S G +++ +++ M +
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MEN 532
Query: 564 RVTPTIEHYTCVVDLLGRSGRLKEAEEF---INQMPIEADGVIWGALL 608
P + +++ L ++ R+ EA + + +M ++ V + LL
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 128/342 (37%), Gaps = 41/342 (11%)
Query: 353 SKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSV----TWNSMMSGYI 408
S + K + +L+S + + D + F G N V T N M+
Sbjct: 70 SGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALR 129
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
+G+ E ++ M++ + +T+ +F++ + +Q + + F N Y
Sbjct: 130 VDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 189
Query: 469 VGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSM 524
L+ K +A + + F P++ +++L+ G + L + M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 525 LVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM--QICYRVTPTIEHYTCVVDLLGRS 582
G+ PN TF + AG +N+ EI M + C P + YT ++D L +
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC---GPDVVTYTVLIDALCTA 306
Query: 583 GRLKEAEEFINQMPI---EADGVIWGALLN----------ASWFWKDIEVGERAAEKLFS 629
+L A+E +M + D V + LL+ FW ++E +
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD---- 362
Query: 630 LDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRKDPG 671
+ F IL + G +G+ +L++ +D G
Sbjct: 363 -----VVTFTILVDALCKAGNFGEA------FDTLDVMRDQG 393
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/531 (20%), Positives = 237/531 (44%), Gaps = 29/531 (5%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS 118
M PL ++ +N ++S ++ ++D ++L M R + +++ +++ R
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 119 LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH----VLWSL 174
+ L + ++K G+E + S+LL I +A + +++ + + + ++
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRS 230
++ G + A+ L +M R ++V + +++G +R D + AL+L M +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-TDLALNLLNKMEAA 254
Query: 231 EVLPNEFTLDCVI-RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
++ + + +I +C A + + K G+ + +L C D
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSD 313
Query: 290 AKRVYESMGGEAC---LNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMIK 342
A ++ M + L N+LI + G+ EAE ++ + R +P +YN ++
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 343 GYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKLFDKTKGER--- 395
G+ M +++K+K++FE M K+ + + NT+I + K+ +++ +LF +
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
++VT+ +++ G H+G A K++ M V T+S+L + ++ +
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYH 511
++ K+ + ++Y+ T +++ K G + D F S+ PNV + +I+G
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 512 GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
L E+ L + M G LPN+ T+ ++ A G E+ M+ C
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 195/475 (41%), Gaps = 64/475 (13%)
Query: 185 MGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
+ +A+ LFG M P+ +V + L+S A+ + + + L M+R E++ +T +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKK-FDVVISLGEKMQRLEIVHGLYTYN 124
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGE 300
+I R + + G +K G + +L YC I DA
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV--------- 175
Query: 301 ACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
+L+ ++ MG + I++ +I G + ++ ++ L ++M
Sbjct: 176 -------ALVDQMVEMGY------------RPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 361 APK----NLTSLNTMISVYSKNGELDEAVKLFDK---TKGERNSVTWNSMMSGYIHNGQH 413
+ NL + +++ K G+ D A+ L +K K E + V +N+++
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ----GQLLHAHLSKTPFQANVYV 469
+AL L+ M + + T+S L + LCS+ + QLL + K N+
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLI---SCLCSYGRWSDASQLLSDMIEKK-INPNLVT 332
Query: 470 GTALVDFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFRSML 525
AL+D + K G +A++ + + P++ + +L+NG+ H ++ +F M+
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
+ P+ T+ ++ + + DG E+F M V T+ YT ++ L G
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDC 451
Query: 586 KEAEEFINQMPIEADGV---------IWGALLNASWFWKDIEVGERAAEKLFSLD 631
A++ QM +DGV + L N K +EV + + LD
Sbjct: 452 DNAQKVFKQMV--SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/531 (20%), Positives = 236/531 (44%), Gaps = 29/531 (5%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS 118
M PL ++ +N ++S ++ ++D ++L M R + N +++ +++ R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 119 LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD----GNHVLWSL 174
+ L + ++K G+E + S+LL I +A + +++ + + + ++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRS 230
++ G + A+ L +M R ++V + +++G +R D + A +L M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAA 179
Query: 231 EVLPNEFTLDCVI-RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
++ + + +I +C A + + K G+ + +L C D
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSD 238
Query: 290 AKRVYESMGGEAC---LNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMIK 342
A ++ M + L N+LI + G+ EAE + + R +P +YN +I
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 343 GYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKLFDKTKGER--- 395
G+ M +++K+K++FE M K+ L + NT+I + K+ +++ +LF +
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 396 NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLH 455
++VT+ +++ G H+G A K++ M V T+S+L + ++ +
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 456 AHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYH 511
++ K+ + ++Y+ T +++ K G + D F S+ PNV + +I+G
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 512 GLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
L E+ L + M G LP++ T+ ++ A G E+ M+ C
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 37/364 (10%)
Query: 297 MGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIE 351
+G E + +SL+ G RI +A +++ G R + I++ +I G + ++
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP-DTITFTTLIHGLFLHNKAS 132
Query: 352 KSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDK---TKGERNSVTWNSMM 404
++ L ++M + NL + +++ K G++D A L +K K E + V +N+++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF----QQGQLLHAHLSK 460
+AL L+ M + + T+S L + LCS+ QLL + K
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI---SCLCSYGRWSDASQLLSDMIEK 249
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSE 516
N+ AL+D + K G +A++ + P++ + +LING+ H +
Sbjct: 250 K-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVV 576
+ +F M+ + P+ T+ ++ + + DG E+F M V T+ YT ++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLI 367
Query: 577 DLLGRSGRLKEAEEFINQMPIEADGV---------IWGALLNASWFWKDIEVGERAAEKL 627
L G A++ QM +DGV + L N K +EV + +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMV--SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 628 FSLD 631
LD
Sbjct: 426 IKLD 429
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 123/593 (20%), Positives = 258/593 (43%), Gaps = 37/593 (6%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTV----SSWNTMISGYSQWGRYDEALAL 90
P V++ + I K G++ E + EM +V ++ T++ + Y ALAL
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
S M + ++ + ++ ++ ++G L ++ +LL+ + +AL+ +
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 151 CCGIGEAELVFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV----A 202
+ AE + ++ + N V +S M++GYV++ M+ A+ L KM ++VV
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 203 WTTLISGY--ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
+ T+I G A +E E A++L + MR V N + LD ++ R+G + K +
Sbjct: 437 YGTVIDGLFKAGKE---EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Query: 261 LCIKDGLDFDNSIGGALAEFY---CDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
+ G+ D +L + + D +A + G + N LI G++ G
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 553
Query: 318 RIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLN 369
++ A+ + G+RE + ++N+M+ E +L++KM +L S N
Sbjct: 554 KVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN 612
Query: 370 TMISVYSKNGELDEAVKLFDKT---KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
++ + +NG+++EA+ + ++ + N T+ + + + K + T+
Sbjct: 613 IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSY 672
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+ SR ++ L L ++ ++ + F + +L+ Y H+ A
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Query: 487 QRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+++ + SPNVA + +I G + GL E M +G+ P+ T+ A++S
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
+ G + + I+ M I + P Y ++ G++ +A E + +M
Sbjct: 793 QAKIGNMKGSMTIYCEM-IADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 151/315 (47%), Gaps = 14/315 (4%)
Query: 307 NSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA 361
N++I GL G +EA E++ G+ + +SYN +I G+ ++K L ++++
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILP-DTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 362 PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYV 421
NL + ++S Y ++EA + + + + VT++S+++ G+ E L
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 422 TMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCG 481
M +SV + T++ L + ++ L++ + ++ V T L+D K G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 482 HLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFV 537
L +A+++F + PNV +TAL++G G S + + ML + V+PN T+
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 538 AILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM-- 595
++++ G+L + + + M+ V P Y V+D L ++G+ + A E +M
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKME-DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 596 -PIEADGVIWGALLN 609
+E + I AL+N
Sbjct: 463 IGVEENNYILDALVN 477
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 161/364 (44%), Gaps = 41/364 (11%)
Query: 367 SLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
+LN +I + K G L A+ L ++VT+N+++SG +G EA + M ++
Sbjct: 131 ALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 190
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+ +++ L + +F + + L +S + N+ T L+ Y + +A
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNLHAIEEA 246
Query: 487 QRSFT-SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSH 545
R S F P+V ++++IN G E LL R M V PN T+ ++ +
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 546 AGLLNDGLEIFHSMQICYRVTPT-IEHYTCVVDLLGRSGRLKEAEEFI------NQMPIE 598
A + L ++ M + R P + YT ++D L ++G L+EAE+ NQ+P
Sbjct: 307 ANIYRHALALYSQMVV--RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP-- 362
Query: 599 ADGVIWGALLNASWFWKDIEVGERAAEKLF--SLDPNPISGFVILSNMYAILGRWGQKTT 656
+ V + AL++ D+ E ++ S+ PN ++ + + N Y G + +
Sbjct: 363 -NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT-YSSMINGYVKKGMLEEAVS 420
Query: 657 IRKRLQSLELRKDPGCSW----------------IELNNNIHMFSVEDKTHAYSDVIYAT 700
+ ++++ + + G ++ IEL+ + + VE+ + ++ A
Sbjct: 421 LLRKMEDQNVVPN-GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY----ILDAL 475
Query: 701 VDHL 704
V+HL
Sbjct: 476 VNHL 479
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 130/671 (19%), Positives = 270/671 (40%), Gaps = 100/671 (14%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDE--MPLRTVSSWNTMISGYSQWGRYDEALALAS 92
P V + N+ I K G L+ A + + + TV+ +NT+ISG + G DEA S
Sbjct: 127 PDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVT-YNTVISGLCEHGLADEAYQFLS 185
Query: 93 FMHRSCVKLNEISFSAVLSSCARSGSLFLGKQV-----------HSLLLK---------- 131
M + + + +S++ ++ + G+ K + H++LL
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE 245
Query: 132 -------SGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRD----GNHVLWSLMLSGYV 180
SGF+ + S+++ + + E L+ E+ + NHV ++ ++
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 181 QRDMMGNAMDLFGKMPVR----DVVAWTTLISG--------------------------- 209
+ ++ +A+ L+ +M VR D+V +T L+ G
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 210 -YARREDGCERALDL------FRCMRRSEVLPNEFTLDCVIRICARLGALHAG-----KV 257
Y DG +A DL M V+PN T +I + G L K+
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
+ +G + I G L + + AI+ +K + +G E + ++L+ L +G
Sbjct: 426 EDQNVVPNGFTYGTVIDG-LFKAGKEEMAIELSKEM-RLIGVEENNYILDALVNHLKRIG 483
Query: 318 RIEEA-----ELIFYGLRETNPISYNLMI----KGYAMSSQIEKSKRLFEKMAPKNLTSL 368
RI+E +++ G+ + I+Y +I KG + + ++ + E+ P ++ S
Sbjct: 484 RIKEVKGLVKDMVSKGV-TLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSY 542
Query: 369 NTMISVYSKNGEL--DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
N +IS K G++ D A K + E + T+N MM+ G LKL+ M+
Sbjct: 543 NVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
+ S + +++ ++ + + N+ +D SK
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 487 QRSFTSIFSPNVA----AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
++ ++ S + + LI G+ ++ ++ M +G +P+ TF +++
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP---IEA 599
+ L + S+ + ++P + Y ++ L +G +KE ++++++M +
Sbjct: 723 YFVGSHVRKALSTY-SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Query: 600 DGVIWGALLNA 610
D + AL++
Sbjct: 782 DDFTYNALISG 792
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/560 (19%), Positives = 230/560 (41%), Gaps = 69/560 (12%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEAR----HMFDEMPLRTVSSWNT 73
E + F LL D++ P+V++ + K G+L+ A M ++ + V ++++
Sbjct: 347 EAEKTFKMLLEDNQV--PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
MI+GY + G +EA++L M V N ++ V+ ++G + ++ + G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 134 FEKFGLVGSALLYFCVRCCGIGEAE-LVFEELRDG---NHVLWSLMLSGYVQRDMMGNAM 189
E+ + AL+ R I E + LV + + G + + ++ ++ + + A+
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAAL 524
Query: 190 DLFGKMPVR----DVVAWTTLISGYAR-REDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
+M R DVV++ LISG + + G + A ++ MR + P+ T + ++
Sbjct: 525 AWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA---YKGMREKGIEPDIATFNIMMN 581
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN 304
+ G D + I +S G + L
Sbjct: 582 SQRKQG--------------------------------DSEGILKLWDKMKSCGIKPSLM 609
Query: 305 VANSLIGGLILMGRIEEAELIFYG--LRETNP--ISYNLMIKGYAMSSQIEKSKRLFEKM 360
N ++G L G++EEA I L E +P +Y + + + + + + E +
Sbjct: 610 SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETL 669
Query: 361 APKNLT----SLNTMISVYSKNGELDEAVKLFDKTKGE---RNSVTWNSMMSGYIHNGQH 413
+ NT+I+ K G +A + + ++VT+NS+M GY
Sbjct: 670 LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHV 729
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
+AL Y M + + +T++ + R + ++ + + + + + AL
Sbjct: 730 RKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 789
Query: 474 VDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
+ +K G++ + + + + P + + LI+ +A G ++ L + M +GV
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 530 LPNAATFVAILSA----CSH 545
PN +T+ ++S C+H
Sbjct: 850 SPNTSTYCTMISGLCKLCTH 869
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 120/569 (21%), Positives = 249/569 (43%), Gaps = 37/569 (6%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+L EA +F EM P ++ ++ ++S ++ ++D ++ M V N +++
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
+++ R L + ++K G+ + ++LL I EA + +++ +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 168 NH----VLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCER 219
+ V ++ ++ G Q + A+ L +M V+ D+V + +I+G +R + +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DL 223
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
AL+L M + ++ + VI + + + G+ D +L
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 280 FYCDRDAIDDAKRVYESMGGEACLN----VANSLIGGLILMGRIEEAELIFYGL--RETN 333
C+ DA R+ M E +N NSLI G++ EAE +F + R +
Sbjct: 284 CLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 334 P--ISYNLMIKGYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELDEAVKL 387
P ++YN +I G+ M ++++++++F M K+ + + NT+I+ + K ++ + ++L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 388 FDKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
F + R N+VT+ +++ G+ A ++ M V + T++ L
Sbjct: 403 F-RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVA 499
++ ++ +L K+ + ++Y + + K G + D F S+ P+V
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
A+ +I+G+ GL E+ LF M G LP++ T+ ++ A G E+ M
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 560 QICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
+ C R Y V D+L GRL +
Sbjct: 582 RSC-RFAGDASTYGLVTDML-HDGRLDKG 608
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 195/446 (43%), Gaps = 37/446 (8%)
Query: 185 MGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCM-RRSEVLP---NE 236
+ A+DLFG+M P +V ++ L+S A+ + DL + E+L N
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM-----KKFDLVISFGEKMEILGVSHNL 100
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
+T + +I R L + G +K G +L +C + I +A + +
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 297 M---GGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSS 348
M G + +L+ GL + EA ++ G + + ++Y +I G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRG 219
Query: 349 QIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDK--TKGERNSV-TWN 401
+ + + L KM + + +T+I K +D+A+ LF + KG R V T++
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
S++S + G+ S+A +L M ++ + TF+ L A + + L + +
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSES 517
N+ +L++ + L +AQ+ FT + S P+V + LING+ +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ LFR M +G++ N T+ ++ A ++ +F M + V P I Y ++D
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM-VSDGVHPNIMTYNTLLD 458
Query: 578 LLGRSGRLKEAE---EFINQMPIEAD 600
L ++G+L++A E++ + +E D
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPD 484
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 148/342 (43%), Gaps = 82/342 (23%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALA 89
+P+V++ N I AK G+L EA +FDEM R++ ++N++I+G+ R DEA
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 90 LASFM-HRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
+ + M + C+ + ++++ +++ ++ K V + L + GLV
Sbjct: 367 IFTLMVSKDCLP-DVVTYNTLINGFCKA-----KKVVDGMELFRDMSRRGLV-------- 412
Query: 149 VRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRD-----VVAW 203
GN V ++ ++ G+ Q NA +F +M V D ++ +
Sbjct: 413 ------------------GNTVTYTTLIHGFFQASDCDNAQMVFKQM-VSDGVHPNIMTY 453
Query: 204 TTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCI 263
TL+ G + E+A+ +F +++S++ P+ +T + + G AGKV
Sbjct: 454 NTLLDGLC-KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE-----GMCKAGKV------ 501
Query: 264 KDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA-NSLIGGLILMGRIEEA 322
+DG D S+ S+ G +A N++I G G EEA
Sbjct: 502 EDGWDLFCSL----------------------SLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 323 ELIFYGLRETNPI----SYNLMIKGYAMSSQIEKSKRLFEKM 360
+F ++E P+ +YN +I+ + S L ++M
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/543 (19%), Positives = 243/543 (44%), Gaps = 35/543 (6%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
++ +A +F +M P ++ +N ++S ++ +++ ++L M + + ++S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++ R L L V + ++K G+E + S+LL I +A + +++ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 168 NH----VLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCER 219
+ ++ ++ G + A+ L +M R D+V + T+++G +R D +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD-IDL 241
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
AL L + M + ++ + + +I + + + G+ D +L
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 280 FYCDRDAIDDAKRVYESMGGEACLN----VANSLIGGLILMGRIEEAELIFYGL--RETN 333
C+ DA R+ M E +N ++LI + G++ EAE ++ + R +
Sbjct: 302 CLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 334 P--ISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKL 387
P +Y+ +I G+ M +++++K +FE M K N+ + +T+I + K ++E ++L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 388 FDKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
F + +R N+VT+ +++ G+ A ++ M + V + T+++L
Sbjct: 421 F-REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVA 499
+ ++ +L ++ + ++Y +++ K G + D F ++ SPNV
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
A+ +I+G+ G E+ L + M G LPN+ T+ ++ A G E+ M
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 560 QIC 562
+ C
Sbjct: 600 RSC 602
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 209/494 (42%), Gaps = 30/494 (6%)
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM----PVRDVVAWTTLI 207
CG G E F + LS ++ D +A+DLFG M P +V + L+
Sbjct: 34 CGSGCWERSFASASGDYREILRNRLSDIIKVD---DAVDLFGDMVKSRPFPSIVEFNKLL 90
Query: 208 SGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGL 267
S A+ + E + L M+ + + +T I R L V +K G
Sbjct: 91 SAVAKM-NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 268 DFDNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEAEL 324
+ D +L YC I DA + + M G + +LI GL L + EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 325 IFYGL--RETNP--ISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYS 376
+ + R P ++Y ++ G I+ + L +KM + + NT+I
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 377 KNGELDEAVKLFDK--TKGERNSV-TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
K +D+A+ LF + KG R V T++S++S + G+ S+A +L M ++ +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
TFS L A + + L+ + K +++ ++L++ + L +A+ F +
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 494 FS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
S PNV ++ LI G+ E + LFR M +G++ N T+ ++ A
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE---EFINQMPIEADGVIWGA 606
++ +F M + V P I Y ++D L ++G+L +A E++ + +E D +
Sbjct: 450 DNAQMVFKQM-VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 607 LLNASWFWKDIEVG 620
++ +E G
Sbjct: 509 MIEGMCKAGKVEDG 522
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 150/339 (44%), Gaps = 21/339 (6%)
Query: 318 RIEEAELIFYGLRETNP----ISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLN 369
++++A +F + ++ P + +N ++ A ++ E L E+M +L + +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 370 TMISVYSKNGELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
I+ + + +L A+ + K E + VT +S+++GY H+ + S+A+ L M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
TF+ L + L + + Q ++ +V+ K G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 487 ----QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
++ +V + +I+G + +++ LF M +G+ P+ T+ +++S
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEA 599
+ G +D + M I ++ P + ++ ++D + G+L EAE+ ++M I+
Sbjct: 303 LCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 600 DGVIWGALLNASWFWKDIEVGERAAEKLFSLD--PNPIS 636
D + +L+N ++ + E + S D PN ++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 62/275 (22%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALA 89
+P+V++ + I K G+L EA ++DEM R++ +++++I+G+ R DEA
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY--- 146
+ M N +++S ++ ++ + G ++ + + GLVG+ + Y
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-----SQRGLVGNTVTYTTL 439
Query: 147 ----FCVRCCGIGEAELVFEELRD----GNHVLWSLMLSG---------------YVQRD 183
F R C A++VF+++ N + ++++L G Y+QR
Sbjct: 440 IHGFFQARDC--DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 184 MM-----------------GNAMD---LFGKMPVR----DVVAWTTLISGYARREDGCER 219
M G D LF + ++ +V+A+ T+ISG+ R+ E
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK-EE 556
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHA 254
A L + M+ LPN T + +IR R G A
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 208/498 (41%), Gaps = 91/498 (18%)
Query: 58 HMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSG 117
HM PL +++ ++ ++S S+ +YD + L M + N + + +L+ R
Sbjct: 71 HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS 130
Query: 118 SLFLGKQVHSLLLKSGFE-KFGLVGSALLYFCVRCCGIGEAELVFEEL----RDGNHVLW 172
L L ++K G E GS L FC R + +A +F+++ N V++
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC-RGDRVYDALYMFDQMVGMGYKPNVVIY 189
Query: 173 SLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGY---ARREDGCERALDLFR 225
+ ++ G + + NA+DL +M DVV + +LISG R D A +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD----ATRMVS 245
Query: 226 CMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRD 285
CM + E+ P+ FT + +I C + G + + + I+ LD D L C
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 286 AIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYA 345
+D+A+ ++ M + C + ++Y+++I GY
Sbjct: 306 RLDEAEEMFGFMVSKGCF----------------------------PDVVTYSILINGYC 337
Query: 346 MSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVKLFDK---TKGERNSV 398
S ++E +LF +M+ +N + +I Y + G+L+ A ++F + N +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
T+N ++ G NG+ +AL + M++ +D T++++ R +C
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG---MC------------ 442
Query: 459 SKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLG 514
K G +ADA + S+ P++ +T ++ G GL
Sbjct: 443 --------------------KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 515 SESILLFRSMLVQGVLPN 532
E+ LFR M G+LPN
Sbjct: 483 READALFRKMKEDGILPN 500
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 146/320 (45%), Gaps = 27/320 (8%)
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA- 361
L++A S +G +I +G E + +++ ++ G+ ++ + +F++M
Sbjct: 132 LSLALSFLGKMIKLGH------------EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 362 ---PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE---RNSVTWNSMMSGYIHNGQHSE 415
N+ NT+I K+ ++D A+ L ++ + + + VT+NS++SG +G+ S+
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
A ++ M + + TF+ L AC + + + + + ++ + L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 476 FYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLP 531
L +A+ F + S P+V ++ LINGY + LF M +GV+
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 532 NAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEF 591
N T+ ++ AG LN EIF M C V P I Y ++ L +G++++A
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFC-GVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 592 INQMP---IEADGVIWGALL 608
+ M ++AD V + ++
Sbjct: 419 LADMQKNGMDADIVTYNIII 438
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 142/314 (45%), Gaps = 16/314 (5%)
Query: 33 HHPHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEAL 88
+ P+V+ N I K+ ++ A + + M V ++N++ISG GR+ +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
+ S M + + + +F+A++ +C + G + ++ + +++ + + S L+Y
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 149 VRCCGIGEAELVFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMP----VRDV 200
+ EAE +F + + V +S++++GY + + + M LF +M VR+
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 201 VAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHG 260
V +T LI GY R A ++FR M V PN T + ++ G + V+
Sbjct: 362 VTYTILIQGYC-RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 261 LCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLN---VANSLIGGLILMG 317
K+G+D D + C + DA +Y S+ + + +++ GL G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 318 RIEEAELIFYGLRE 331
EA+ +F ++E
Sbjct: 481 LRREADALFRKMKE 494
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALAL 90
P +++ ++ I L EA MF M + V +++ +I+GY + + + + L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
M + V N ++++ ++ R+G L + +++ ++ G + + LL+
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 151 CCGIGEAELVFEELR----DGNHVLWSLMLSGYVQRDMMGNAMDLF------GKMPVRDV 200
I +A ++ +++ D + V +++++ G + + +A D++ G MP D+
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP--DI 466
Query: 201 VAWTTLISGYARREDGCERALD-LFRCMRRSEVLPNE 236
+TT++ G ++ G R D LFR M+ +LPNE
Sbjct: 467 WTYTTMMLGLYKK--GLRREADALFRKMKEDGILPNE 501
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%)
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
L + C Q+ + +H +S + ++ L++ YS CG +A F + N
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
+ W +I +A +G G ++I +F +G +P+ F I AC G +++GL F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 558 SMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDI 617
SM Y + P+IE Y +V++ G L EA EF+ +MP+E + +W L+N S ++
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 618 EVGERAAEKLFSLDPNPIS 636
E+G+ AE + LDP ++
Sbjct: 440 ELGDYCAEVVEFLDPTRLN 458
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 219/488 (44%), Gaps = 34/488 (6%)
Query: 10 VRNCCK--RVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRT 67
V CK ++EK F + +++ + +P +++ N I+ + G + EA + + MP +
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQE-KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 68 VS----SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
S ++NT+I+G + G+Y+ A + + M RS + + ++ ++L + G + +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG----NHVLWSLMLSGY 179
+V S + + S+++ R + +A + F +++ ++V++++++ GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 180 VQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPN 235
++ M+ AM+L +M + DVV + T++ G +R+ E A LF M + P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE-ADKLFNEMTERALFPD 479
Query: 236 EFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE 295
+TL +I +LG L + + + D L + + ID AK ++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 296 SMGGEACLNVANS---LIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMS 347
M + L S L+ L G + EA E+I ++ T I N MIKGY S
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC-NSMIKGYCRS 598
Query: 348 SQIEKSKRLFEKMAPKNLT----SLNTMISVYSKNGELDEAVKLFDKTKGERNSV----- 398
+ EKM + S NT+I + + + +A L K + E+ +
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 399 TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHL 458
T+NS++ G+ Q EA + M V+ RST++ + S + + +H +
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 459 SKTPFQAN 466
+ F +
Sbjct: 719 LQRGFSPD 726
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/542 (18%), Positives = 217/542 (40%), Gaps = 75/542 (13%)
Query: 36 HVISTNISIAHRAKTGELAEARHMFDEMPLRTV----SSWNTMISGYSQWGRYDEALALA 91
+V + NI + K G++ + ++ + V ++NT+IS YS G +EA L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
+ M +++ V++ + G K+V + +L+SG +LL +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
+ E E VF ++R RD+ V D+V +++++S +
Sbjct: 354 GDVVETEKVFSDMR---------------SRDV------------VPDLVCFSSMMSLFT 386
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDN 271
R ++AL F ++ + ++P+ +I+ R G + + ++ G D
Sbjct: 387 R-SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 272 SIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSL---IGGLILMGRIEEAELIFYG 328
+ C R + +A +++ M A + +L I G +G ++ A +F
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 329 LRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNGE 380
++E + ++YN ++ G+ I+ +K ++ M K + S + +++ G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 381 LDEAVKLFDK--TKGERNSV-TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSV 437
L EA +++D+ +K + +V NSM+ GY +G S+ M
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM----------ISEG 615
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
C S + G + ++SK + + + Q P+
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKA---------------FGLVKKMEEEQGGLV----PD 656
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
V + ++++G+ E+ ++ R M+ +GV P+ +T+ +++ L + I
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 558 SM 559
M
Sbjct: 717 EM 718
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 127/627 (20%), Positives = 241/627 (38%), Gaps = 79/627 (12%)
Query: 67 TVSSWNTMISGYSQWGRYDEALA-LASFMHRSCVKLNEI--SFSAVLSSCARSGSLF--- 120
T S + MI + GR +A + L + RS V EI S + S+C + S+F
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL 171
Query: 121 LGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCG--------IGEAEL---VFEEL-RDG- 167
+ V + L+ E F L+ S + C IG EL V++E+ R G
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGV 231
Query: 168 --NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERAL 221
N ++M++ + M ++ + D+V + TLIS Y+ + E A
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK-GLMEEAF 290
Query: 222 DLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFY 281
+L M P +T + VI + G K V ++ GL D++ +L
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 282 CDRDAIDDAKRVYESMGGEAC---LNVANSLIGGLILMGRIEEAELIFYGLRETNPIS-- 336
C + + + ++V+ M L +S++ G +++A + F ++E I
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 337 --YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE 394
Y ++I+GY I + L +N L + +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNL--------------------RNEMLQQGCAM------- 443
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
+ VT+N+++ G EA KL+ M ++ T ++L L + Q L
Sbjct: 444 -DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAY 510
+ + + +V L+D + K G + A+ + + S P +++ L+N
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 511 HGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIE 570
G +E+ ++ M+ + + P +++ +G +DG E F I P
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG-ESFLEKMISEGFVPDCI 621
Query: 571 HYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI-----WGALLNASWFWKDIEVGERAAE 625
Y ++ R + +A + +M E G++ + ++L+ ++ E
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 626 KLFSLDPNP--------ISGFVILSNM 644
K+ NP I+GFV N+
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNL 708
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 243/570 (42%), Gaps = 96/570 (16%)
Query: 25 TLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQ 80
+L+ D P P+V++ I K GE+ A +F M R + +++T+I GY +
Sbjct: 275 SLVLDCGPA-PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 81 WGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG------- 133
G L S VKL+ + FS+ + +SG L V+ +L G
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 134 --------------FEKFGLVGSALLY---------------FCVRCCGIGEAELVFEEL 164
+E FG+ G L FC +C + ++E++
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC-KCGNLRSGFALYEDM 452
Query: 165 RDGNH----VLWSLMLSGYVQRDMMGNAMDLFGKM---PVR-DVVAWTTLISGYARREDG 216
+ V++ +++ G ++ +M +AM KM +R +VV + +LI G+ R +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL-NR 511
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+ AL +FR M + P+ T V+R+ G L + K GL+ D
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 277 LAEFYCDRDAIDDAKRVYESMGGE---ACLNVANSLIGGLILMGRIEEAELIFYGL---- 329
L + +C ++++ M A + V N +I L RIE+A F L
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFE--KMAP--KNLTSLNTMISVYSKNGELDEAV 385
E + ++YN MI GY ++++++R+FE K+ P N +L +I V KN ++D A+
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 386 KLFD--KTKGER-NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
++F KG + N+VT+ +M + + + KL+ M+ + S ++S++
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII--- 748
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
LC ++G++ A N++ ++ + P+V A+
Sbjct: 749 DGLC--KRGRVDEA--------TNIF------------------HQAIDAKLLPDVVAYA 780
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPN 532
LI GY G E+ LL+ ML GV P+
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 135/666 (20%), Positives = 252/666 (37%), Gaps = 117/666 (17%)
Query: 43 SIAH-RAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQ----------------WGRYD 85
+IAH + G A +FDEM +N + S + +G D
Sbjct: 104 TIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVD 163
Query: 86 EALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALL 145
+AL + + + V + + S +L+S S + L L + G E G+ +
Sbjct: 164 KALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFV 223
Query: 146 YFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM--------PV 197
+ C G L F L ++ V + + + +++ ++ P
Sbjct: 224 LDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPA 283
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
+VV + TLI+G+ +R + +RA DLF+ M + + P+ +I + G L G
Sbjct: 284 PNVVTFCTLINGFCKRGE-MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLI 314
+ + G+ D + + + Y + A VY+ M G + LI GL
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 315 LMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNL 365
GRI EA +++ G+ E + ++Y+ +I G+ + L+E M P ++
Sbjct: 403 QDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 366 TSLNTMISVYSKNGELDEAVKLFDKTKGER---NSVTWNSMMSGYIHNGQHSEALKLYVT 422
++ SK G + A++ K G+ N V +NS++ G+ + EALK++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 423 MRRLSVDHSRSTFSVLFRA-----------------------------CTSLCSFQQ--- 450
M + +TF+ + R CT + +F +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 451 ---GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI-------------- 493
G L + + A++ V ++ KC + DA + F ++
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 494 -------------------------FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQG 528
F PN T LI+ + +I +F M +G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 529 VLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
PNA T+ ++ S + + ++F MQ ++P+I Y+ ++D L + GR+ EA
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE-KGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 589 EEFINQ 594
+Q
Sbjct: 761 TNIFHQ 766
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/523 (18%), Positives = 235/523 (44%), Gaps = 29/523 (5%)
Query: 64 PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
P V ++ T+I+G+ + G D A L M + ++ + I++S ++ ++G L +G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR----DGNHVLWSLMLSGY 179
++ S L G + +V S+ + V+ + A +V++ + N V +++++ G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 180 VQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPN 235
Q + A ++G++ R +V +++LI G+ + + L+ M + P+
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN-LRSGFALYEDMIKMGYPPD 460
Query: 236 EFTLDCVIRICARLG-ALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
++ ++ G LHA + + + + + + +L + +C + D+A +V+
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKM-LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 295 ESMGG---EACLNVANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMS 347
MG + + +++ I+ GR+EEA +F+ + E + ++Y +I +
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 348 SQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFD---KTKGERNSVTW 400
+ +LF+ M +++ N +I + K +++A K F+ + K E + VT+
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
N+M+ GY + EA +++ ++ + T ++L + + +++
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 461 TPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSE 516
+ N L+D++SK + + + F + SP++ +++ +I+G G E
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Query: 517 SILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
+ +F + +LP+ + ++ G L + ++ M
Sbjct: 760 ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 229/506 (45%), Gaps = 33/506 (6%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS 118
M PL ++ +N ++S ++ ++D ++L M R + N +++ +++ R
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 119 LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH----VLWSL 174
+ L + ++K G+E + S+LL I +A + +++ + + + ++
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRS 230
++ G + A+ L +M R ++V + +++G +R D + A +L M +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD-IDLAFNLLNKMEAA 254
Query: 231 EVLPNEFTLDCVI-RICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD 289
++ N VI +C A + + K G+ + +L C+ + D
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSD 313
Query: 290 AKRVYESMGGEACLN----VANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMI 341
A R+ M E +N N+LI + G++ EAE ++ + R +P +Y+ +I
Sbjct: 314 ASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 342 KGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGER-- 395
G+ M +++++K +FE M K N+ + NT+I+ + K +DE V+LF + +R
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF-REMSQRGL 431
Query: 396 --NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQL 453
N+VT+ +++ G+ A ++ M V + T++ L ++ +
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 454 LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYA 509
+ +L ++ + +Y +++ K G + D F S+ P+V + +I+G+
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 510 YHGLGSESILLFRSMLVQGVLPNAAT 535
GL E+ LFR M G LP++ T
Sbjct: 552 RKGLKEEADALFRKMREDGPLPDSGT 577
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 188/427 (44%), Gaps = 26/427 (6%)
Query: 185 MGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLD 240
+ +A+ LFG M P+ + + L+S A+ + + + L M+R + N +T +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK-FDLVISLGEKMQRLGISHNLYTYN 124
Query: 241 CVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM--- 297
+I R + + G +K G + +L YC I DA + + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 298 GGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEK 352
G +LI GL L + EA ++ G + N ++Y +++ G I+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLCKRGDIDL 243
Query: 353 SKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDK--TKGER-NSVTWNSMMS 405
+ L KM N+ +T+I K D+A+ LF + KG R N +T++S++S
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 406 GYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQA 465
+ + S+A +L M ++ + TF+ L A + + L+ + K
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 466 NVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLF 521
+++ ++L++ + L +A+ F + S PNV + LING+ E + LF
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 522 RSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGR 581
R M +G++ N T+ ++ A ++ +F M + V P I Y ++D L +
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCK 482
Query: 582 SGRLKEA 588
+G+L++A
Sbjct: 483 NGKLEKA 489
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 148/339 (43%), Gaps = 21/339 (6%)
Query: 318 RIEEAELIFYGLRETNPI----SYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLN 369
++++A +F G+ ++ P+ +N ++ A + + L EKM NL + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 370 TMISVYSKNGELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRL 426
+I+ + + ++ A+ L K E + VT +S+++GY H + S+A+ L M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 427 SVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA 486
TF+ L + L + + Q N+ +V+ K G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 487 ----QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSA 542
+ + NV ++ +I+ + +++ LF M +GV PN T+ +++S
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 543 CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEA 599
+ +D + M I ++ P + + ++D + G+L EAE+ ++M I+
Sbjct: 305 LCNYERWSDASRLLSDM-IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 600 DGVIWGALLNASWFWKDIEVGERAAEKLFSLD--PNPIS 636
D + +L+N ++ + E + S D PN ++
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 130/311 (41%), Gaps = 74/311 (23%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALA 89
+P+V++ N I K G+L EA ++DEM R++ +++++I+G+ R DEA
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
+ M N ++++ +++ ++ + G ++ + + G
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV-------------- 432
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRD-----VVAWT 204
GN V ++ ++ G+ Q NA +F +M V D ++ +
Sbjct: 433 -----------------GNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPNIMTYN 474
Query: 205 TLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIK 264
TL+ G + E+A+ +F ++RS++ P +T + +I G AGKV +
Sbjct: 475 TLLDGLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE-----GMCKAGKV------E 522
Query: 265 DGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAEL 324
DG D +C G + + + N++I G G EEA+
Sbjct: 523 DGWD-----------LFCS----------LSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 325 IFYGLRETNPI 335
+F +RE P+
Sbjct: 562 LFRKMREDGPL 572
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 133/637 (20%), Positives = 249/637 (39%), Gaps = 88/637 (13%)
Query: 43 SIAH-RAKTGELAEARHMFDEMPLRTVSSWNTMISGYSQ----------------WGRYD 85
+IAH + G A +FDEM +N + S + +G D
Sbjct: 104 TIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVD 163
Query: 86 EALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALL 145
+AL + + + V + + S +L+S S + L L + G E G+ +
Sbjct: 164 KALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFV 223
Query: 146 YFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM--------PV 197
+ C G L F L ++ V + + + +++ ++ P
Sbjct: 224 LDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPA 283
Query: 198 RDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKV 257
+VV + TLI+G+ +R + +RA DLF+ M + + P+ +I + G L G
Sbjct: 284 PNVVTFCTLINGFCKRGE-MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 258 VHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLI 314
+ + G+ D + + + Y + A VY+ M G + LI GL
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 315 LMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNL 365
GRI EA +++ G+ E + ++Y+ +I G+ + L+E M P ++
Sbjct: 403 QDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 366 TSLNTMISVYSKNGELDEAVKLFDKTKGER---NSVTWNSMMSGYIHNGQHSEALKLYVT 422
++ SK G + A++ K G+ N V +NS++ G+ + EALK++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 423 MRRLSVDHSRSTFSVLFRACT---SLCSFQQ---GQLLHAHLSKTPFQANVYVGTALVDF 476
M + +TF+ + R + C + G L + + A++ V ++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 477 YSKCGHLADAQRSFTSI---------------------------------------FSPN 497
KC + DA + F ++ F PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
T LI+ + +I +F M +G PNA T+ ++ S + + ++F
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 558 SMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQ 594
MQ ++P+I Y+ ++D L + GR+ EA +Q
Sbjct: 702 EMQE-KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 135/577 (23%), Positives = 238/577 (41%), Gaps = 121/577 (20%)
Query: 16 RVEKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SW 71
++E +L+ D P P+V++ I K GE+ A +F M R + ++
Sbjct: 266 QIEVASRLLSLVLDCGPA-PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 72 NTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK 131
+T+I GY + G L S VKL+ + FS+ + +SG L V+ +L
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 132 SG---------------------FEKFGLVGSALLY---------------FCVRCCGIG 155
G +E FG+ G L FC +C +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC-KCGNLR 443
Query: 156 EAELVFEELRDGNH----VLWSLMLSGYVQRDMMGNAMDLFGKM---PVR-DVVAWTTLI 207
++E++ + V++ +++ G ++ +M +AM KM +R +VV + +LI
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 208 SGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDG 266
G+ R + + AL +FR M + P+ T V+R+ A K GL + D
Sbjct: 504 DGWCRL-NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIF 326
+ N I +A V N +I L RIE+A F
Sbjct: 563 MQ-RNKISADIA--------------------------VCNVVIHLLFKCHRIEDASKFF 595
Query: 327 YGL----RETNPISYNLMIKGYAMSSQIEKSKRLFE--KMAP--KNLTSLNTMISVYSKN 378
L E + ++YN MI GY ++++++R+FE K+ P N +L +I V KN
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 379 GELDEAVKLFD--KTKGER-NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTF 435
++D A+++F KG + N+VT+ +M + + + KL+ M+ + S ++
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 436 SVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS 495
S++ LC ++G++ A N++ ++ +
Sbjct: 716 SIII---DGLC--KRGRVDEA--------TNIF------------------HQAIDAKLL 744
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPN 532
P+V A+ LI GY G E+ LL+ ML GV P+
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 161/356 (45%), Gaps = 29/356 (8%)
Query: 308 SLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK 363
+LI G G ++ A +F + E + I+Y+ +I GY + + +LF + K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 364 ----NLTSLNTMISVYSKNGELDEAVKLFDKTKGE---RNSVTWNSMMSGYIHNGQHSEA 416
++ ++ I VY K+G+L A ++ + + N VT+ ++ G +G+ EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 417 LKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDF 476
+Y + + ++ S T+S L + + G L+ + K + +V + LVD
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 477 YSKCGHLADAQRSFTSIFSP----NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPN 532
SK G + A R + NV + +LI+G+ E++ +FR M + G+ P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 533 AATFVAILSA-------CSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
ATF ++ C H GL++F MQ +++ I V+ LL + R+
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQR-NKISADIAVCNVVIHLLFKCHRI 588
Query: 586 KEAEEFINQM---PIEADGVIWGALLNASWFWKDIEVGERAAE--KLFSLDPNPIS 636
++A +F N + +E D V + ++ + ++ ER E K+ PN ++
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/533 (19%), Positives = 224/533 (42%), Gaps = 68/533 (12%)
Query: 59 MFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGS 118
+ D P V ++ T+I+G+ + G D A L M + ++ + I++S ++ ++G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 119 LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELR----DGNHVLWSL 174
L +G ++ S L G + +V S+ + V+ + A +V++ + N V +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 175 MLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRS 230
++ G Q + A ++G++ R +V +++LI G+ +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK------------------ 438
Query: 231 EVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA 290
G L +G ++ IK G D I G L + + + A
Sbjct: 439 ------------------CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 291 KRVYESMGGEAC-LNVA--NSLIGGLILMGRIEEAELIF-----YGLRE-----TNPISY 337
R M G++ LNV NSLI G + R +EA +F YG++ T +
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 338 NLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFD---K 390
++M + + +LF+ M +++ N +I + K +++A K F+ +
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 391 TKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
K E + VT+N+M+ GY + EA +++ ++ + T ++L
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALIN 506
+ + +++ + N L+D++SK + + + F + SP++ +++ +I+
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 507 GYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
G G E+ +F + +LP+ + ++ G L + ++ M
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/547 (21%), Positives = 230/547 (42%), Gaps = 38/547 (6%)
Query: 48 AKTGELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
+K G + +A+ +FD M + ++ ++I GY + + L M + + ++
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEE 163
++ V+ SG L + ++ SG ++ + L+ ++ G+A V +E
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 164 LRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARRED 215
+++ + ++ ++ G + M A +M + + ISGY +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 216 GCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGG 275
A + MR VLPN+ +I + G + + + G+ D
Sbjct: 538 FAS-ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 276 ALAEFYCDRDAIDDAKRVYESMGGEACLNVANS---LIGGLILMGRIEEAELIFYGLRE- 331
L D +DDA+ ++ M G+ S LI G +G +++A IF + E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 332 ---TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEA 384
N I YN+++ G+ S +IEK+K L ++M+ K N + T+I Y K+G+L EA
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 385 VKLFDKTKGE---RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR- 440
+LFD+ K + +S + +++ G A+ ++ T ++ S + F+ L
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINW 775
Query: 441 ----ACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI--- 493
T L + +L+ + + N ++D+ K G+L A+ F +
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 494 -FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDG 552
P V +T+L+NGY G +E +F + G+ P+ + I++A G+
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 553 LEIFHSM 559
L + M
Sbjct: 895 LVLVDQM 901
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 148/356 (41%), Gaps = 29/356 (8%)
Query: 297 MGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL 356
M E + A +L G+I G I +A+ +Y +I+GY + + L
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQ------------AYASLIEGYCREKNVRQGYEL 404
Query: 357 FEKMAPKNLT----SLNTMISVYSKNGELDEA---VKLFDKTKGERNSVTWNSMMSGYIH 409
+M +N+ + T++ +G+LD A VK + N V + +++ ++
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
N + +A+++ M+ + ++ L + + + + + + N +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSML 525
A + Y + A A + + PN T LIN Y G E+ +RSM+
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
QG+L +A T+ +++ ++D EIF M+ + P + Y +++ + G +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGNM 643
Query: 586 KEAEEFINQMPIEA---DGVIWGALLNASWFWKDIEVGERAAEKLF--SLDPNPIS 636
++A ++M E + +I+ LL +IE + +++ L PN ++
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 176/456 (38%), Gaps = 57/456 (12%)
Query: 181 QRDMMGNAMDLFGKMPVRDVV----AWTTLISGYARREDGCERALDLFRCMRRSEVLPNE 236
+ +M A LF M ++ A+ +LI GY R E + +L M++ ++ +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR-EKNVRQGYELLVEMKKRNIVISP 417
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
+T V++ G L + I G + I L + + DA RV +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 297 MGGEAC---LNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSS 348
M + + NSLI GL R++EA E++ GL+ N +Y I GY +S
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK-PNAFTYGAFISGYIEAS 536
Query: 349 QIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
+ + + ++M + N V +++ Y
Sbjct: 537 EFASADKYVKEMRECGVLP----------------------------NKVLCTGLINEYC 568
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
G+ EA Y +M + T++VL + + + +V+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 469 VGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSM 524
L++ +SK G++ A F + +PNV + L+ G+ G ++ L M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 525 LVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGR 584
V+G+ PNA T+ I+ +G L + +F M++ + P YT +VD R
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL-KGLVPDSFVYTTLVD---GCCR 744
Query: 585 LKEAEEFI-----NQMPIEADGVIWGALLNASWFWK 615
L + E I N+ + + AL+N W +K
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALIN--WVFK 778
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 220/524 (41%), Gaps = 53/524 (10%)
Query: 37 VISTNISIAHRAKTG-ELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRYDEALALA 91
V S N+ + +K + A A +F E P V+S+N +I Q GR EA L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
M + IS+S V++ R G L ++ ++ + G + + +++ R
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
C + EAE F E M G +P D V +TTLI G+
Sbjct: 330 CKLAEAEEAFSE-------------------------MIRQGILP--DTVVYTTLIDGFC 362
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFD 270
+R D A F M ++ P+ T +I ++G + AGK+ H + K GL+ D
Sbjct: 363 KRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPD 420
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEAC-LNVA--NSLIGGLILMGRIEEAELIFY 327
+ L YC + DA RV+ M C NV +LI GL G ++ A + +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 328 GL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNG 379
+ + N +YN ++ G S IE++ +L + L + T++ Y K+G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 380 ELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
E+D+A ++ + G + VT+N +M+G+ +G + KL M + + +TF+
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI--- 493
L + + + ++ + + LV + K ++ +A F +
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 494 -FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
FS +V+ ++ LI G+ E+ +F M +G+ + F
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 178/426 (41%), Gaps = 59/426 (13%)
Query: 189 MDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
M+L G P DV++++T+++GY R + ++ L M+R + PN + +I + R
Sbjct: 272 MELKGYTP--DVISYSTVVNGYCRFGE-LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC---LNV 305
+ L + I+ G+ D + L + +C R I A + + M +
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 306 ANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKM- 360
++I G +G + EA +F+ + E + +++ +I GY + ++ + R+ M
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 361 ---APKNLTSLNTMISVYSKNGELDEAVKLFD---KTKGERNSVTWNSMMSGYIHNGQHS 414
N+ + T+I K G+LD A +L K + N T+NS+++G +G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
EA+KL G+ A L+ A+ T L+
Sbjct: 509 EAVKLV------------------------------GEFEAAGLN-----ADTVTYTTLM 533
Query: 475 DFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL 530
D Y K G + AQ + P + + L+NG+ HG+ + L ML +G+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQICYR-VTPTIEHYTCVVDLLGRSGRLKEAE 589
PNA TF +++ L I+ M C R V P + Y +V ++ +KEA
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 590 EFINQM 595
+M
Sbjct: 652 FLFQEM 657
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 8/239 (3%)
Query: 364 NLTSLNTMISVYSKNGELDEA--VKLFDKTKG-ERNSVTWNSMMSGYIHNGQHSEALKLY 420
N+ S N +I + G + EA + L + KG + ++++++++GY G+ + KL
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
M+R + + + + +C + + + + + + V T L+D + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 481 GHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
G + A + F + S P+V +TA+I+G+ G E+ LF M +G+ P++ TF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 537 VAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
+++ AG + D + H+ I +P + YT ++D L + G L A E +++M
Sbjct: 425 TELINGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 220/524 (41%), Gaps = 53/524 (10%)
Query: 37 VISTNISIAHRAKTG-ELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRYDEALALA 91
V S N+ + +K + A A +F E P V+S+N +I Q GR EA L
Sbjct: 210 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 92 SFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRC 151
M + IS+S V++ R G L ++ ++ + G + + +++ R
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 152 CGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYA 211
C + EAE F E M G +P D V +TTLI G+
Sbjct: 330 CKLAEAEEAFSE-------------------------MIRQGILP--DTVVYTTLIDGFC 362
Query: 212 RREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFD 270
+R D A F M ++ P+ T +I ++G + AGK+ H + K GL+ D
Sbjct: 363 KRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPD 420
Query: 271 NSIGGALAEFYCDRDAIDDAKRVYESMGGEAC-LNVA--NSLIGGLILMGRIEEAELIFY 327
+ L YC + DA RV+ M C NV +LI GL G ++ A + +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 328 GL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL----TSLNTMISVYSKNG 379
+ + N +YN ++ G S IE++ +L + L + T++ Y K+G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 380 ELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
E+D+A ++ + G + VT+N +M+G+ +G + KL M + + +TF+
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI--- 493
L + + + ++ + + LV + K ++ +A F +
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 494 -FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
FS +V+ ++ LI G+ E+ +F M +G+ + F
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 178/426 (41%), Gaps = 59/426 (13%)
Query: 189 MDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
M+L G P DV++++T+++GY R + ++ L M+R + PN + +I + R
Sbjct: 272 MELKGYTP--DVISYSTVVNGYCRFGE-LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 249 LGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC---LNV 305
+ L + I+ G+ D + L + +C R I A + + M +
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 306 ANSLIGGLILMGRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKM- 360
++I G +G + EA +F+ + E + +++ +I GY + ++ + R+ M
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 361 ---APKNLTSLNTMISVYSKNGELDEAVKLFD---KTKGERNSVTWNSMMSGYIHNGQHS 414
N+ + T+I K G+LD A +L K + N T+NS+++G +G
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 415 EALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALV 474
EA+KL G+ A L+ A+ T L+
Sbjct: 509 EAVKLV------------------------------GEFEAAGLN-----ADTVTYTTLM 533
Query: 475 DFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVL 530
D Y K G + AQ + P + + L+NG+ HG+ + L ML +G+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 531 PNAATFVAILSACSHAGLLNDGLEIFHSMQICYR-VTPTIEHYTCVVDLLGRSGRLKEAE 589
PNA TF +++ L I+ M C R V P + Y +V ++ +KEA
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 590 EFINQM 595
+M
Sbjct: 652 FLFQEM 657
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 8/239 (3%)
Query: 364 NLTSLNTMISVYSKNGELDEA--VKLFDKTKG-ERNSVTWNSMMSGYIHNGQHSEALKLY 420
N+ S N +I + G + EA + L + KG + ++++++++GY G+ + KL
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 421 VTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKC 480
M+R + + + + +C + + + + + + V T L+D + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 481 GHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
G + A + F + S P+V +TA+I+G+ G E+ LF M +G+ P++ TF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 537 VAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
+++ AG + D + H+ I +P + YT ++D L + G L A E +++M
Sbjct: 425 TELINGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/571 (20%), Positives = 231/571 (40%), Gaps = 91/571 (15%)
Query: 12 NCCKRVEKFRL-FTTLLRDSE-PHHPHVISTNISIAHRAKTGELAEARHMFDEM------ 63
NCC R K L F+ + + + + P ++ + I G ++EA + D M
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 64 PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
P T+ + N +++G G+ +A+ L M + + NE+++ VL +SG L
Sbjct: 175 P--TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRD 183
+ LL K K L + V +S+++ G +
Sbjct: 233 E---LLRKMEERKIKL----------------------------DAVKYSIIIDGLCKDG 261
Query: 184 MMGNAMDLFGKMPVR----DVVAWTTLISGY---ARREDGCERALDLFRCMRRSEVLPNE 236
+ NA +LF +M ++ D++ +TTLI G+ R +DG + L R M + ++ P+
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK----LLRDMIKRKITPDV 317
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
+I + G L + +H I+ G+ D +L + +C + +D A + +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 297 MGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL 356
M + C N ++N++I GY ++ I+ L
Sbjct: 378 MVSKGC----------------------------GPNIRTFNILINGYCKANLIDDGLEL 409
Query: 357 FEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDKTKGER---NSVTWNSMMSGYIH 409
F KM+ + + + NT+I + + G+L+ A +LF + R + V++ ++ G
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
NG+ +AL+++ + + ++ ++++ + L L + +V
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 470 GTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSML 525
++ K G L++A F + SPN + LI + G ++S L +
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
G +A+T ++ S L L++
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 198/471 (42%), Gaps = 60/471 (12%)
Query: 187 NAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCV 242
+A+DLF +M P ++ ++ L S AR + + LDL + M + N +TL +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQ-YDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE---SMGG 299
I C R L G IK G + D L C + +A + + MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 300 EACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKR 355
+ L N+L+ GL L G++ +A L+ + ET N ++Y ++K S Q +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 356 LFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDK--TKG-ERNSVTWNSMMSGYI 408
L KM + + + +I K+G LD A LF++ KG + + + + +++ G+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAH-LSKTPFQANV 467
+ G+ + KL M + + FS L C ++G+L A L K Q +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALID-----CFVKEGKLREAEELHKEMIQRGI 348
Query: 468 YVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ 527
SP+ +T+LI+G+ ++ + M+ +
Sbjct: 349 ---------------------------SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 528 GVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKE 587
G PN TF +++ A L++DGLE+F M + V T+ Y ++ G+L+
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEV 440
Query: 588 AEEFINQM---PIEADGVIWGALLNA----SWFWKDIEVGERAAEKLFSLD 631
A+E +M + D V + LL+ K +E+ E+ + LD
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 119/572 (20%), Positives = 237/572 (41%), Gaps = 49/572 (8%)
Query: 55 EARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVL 110
+A +F EM P + ++ + S ++ +YD L L M + N + S ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 111 SSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHV 170
+ C R L L ++K G+E + S L+ + EA + + + + H
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 171 LWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG--------CER--- 219
+ L+ V N + L GK+ ++ + +G+ E C+
Sbjct: 175 PTLITLNALV------NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 220 --ALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVHGLCIKDGLDFDNSIGGA 276
A++L R M ++ + +I + G+L +A + + + IK G D I
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTT 287
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEAC---LNVANSLIGGLILMGRIEEA-----ELIFYG 328
L +C DD ++ M + ++LI + G++ EA E+I G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEA 384
+ + ++Y +I G+ +Q++K+ + + M K N+ + N +I+ Y K +D+
Sbjct: 348 I-SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 385 VKLFDKTKGE---RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
++LF K ++VT+N+++ G+ G+ A +L+ M V ++ +L
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPN 497
++ + + K+ + ++ + ++ + DA F S+ P+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
V + +I G G SE+ LLFR M G PN T+ ++ A G ++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 558 SMQIC-YRVTPTIEHYTCVVDLLGRSGRLKEA 588
++ C + V + VVD+L GRLK++
Sbjct: 587 EIKRCGFSVDASTVKM--VVDMLS-DGRLKKS 615
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 14/248 (5%)
Query: 382 DEAVKLFDKTKGERNS---VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVL 438
D+AV LF + R + ++ + S Q+ L L M + H+ T S++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 439 FRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADA----QRSFTSIF 494
C + K ++ + + L++ G +++A R
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 495 SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLE 554
P + AL+NG +G S+++LL M+ G PN T+ +L +G +E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 555 IFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPI---EADGVIWGALLNAS 611
+ M+ ++ Y+ ++D L + G L A N+M I +AD +I+ L+
Sbjct: 234 LLRKMEE-RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 612 WF---WKD 616
+ W D
Sbjct: 293 CYAGRWDD 300
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 134/618 (21%), Positives = 253/618 (40%), Gaps = 111/618 (17%)
Query: 48 AKTGELAEARHMFDEM----PLRTVSSWNTMISGYSQWGR-YDEALALASFMHRSCVKLN 102
++TG+ +A +F+ M P T+ ++N ++ + + GR + + L + M +K +
Sbjct: 221 SRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFD 280
Query: 103 EISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
E + S VLS+CAR G L K+ + L G+E + +ALL + EA V +
Sbjct: 281 EFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLK 340
Query: 163 ELRD----GNHVLWSLMLSGYVQRDMMGNA------MDLFGKMPVRDVVAWTTLISGYAR 212
E+ + + V ++ +++ YV+ A M G MP + + +TT+I Y +
Sbjct: 341 EMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP--NAITYTTVIDAYGK 398
Query: 213 --REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR----------LGALHAG----- 255
+ED AL LF M+ + +PN T + V+ + + L + +
Sbjct: 399 AGKED---EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 256 ----KVVHGLCIKDGLD-FDNSIGGALAE--FYCDRDAID-------------DAKRVYE 295
+ LC G+D F N + + F DRD + DA ++Y
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 296 SM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLR----ETNPISYNLMIKGYAMSS 348
M G AC+ N+L+ L G E + ++ + SY+LM++ YA
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 349 Q---IEK-SKRLFEKMAPKNLTSLNTMISVYSKNGEL---DEAVKLFDKTKGERNSVTWN 401
IE+ R+ E + L T++ K L + A LF K + + V +N
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
SM+S + N + +A + ++R + T++
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN------------------------- 670
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSES 517
+L+D Y + G A+ ++ P++ ++ +I G+ GL E+
Sbjct: 671 ----------SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 518 ILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVD 577
+ + M +G+ P T+ +S + G+ + ++ M P + VVD
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK-NDCRPNELTFKMVVD 779
Query: 578 LLGRSGRLKEAEEFINQM 595
R+G+ EA +F++++
Sbjct: 780 GYCRAGKYSEAMDFVSKI 797
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 155/366 (42%), Gaps = 21/366 (5%)
Query: 317 GRIEEAELIFYGLRETNP----ISYNLMIKGYA-MSSQIEKSKRLFEKMAPKNLT----S 367
G+ E+A +F ++E P ++YN+++ + M K + ++M K L +
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
+T++S ++ G L EA + F + K E +VT+N+++ + G ++EAL + M
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
S T++ L A ++ + ++K N T ++D Y K G
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 485 DAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
+A + F S+ PN + A+++ +E I + M G PN AT+ +L
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 541 SACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP---I 597
+ C + G+ +F M+ C P + + ++ GR G +A + +M
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSC-GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 598 EADGVIWGALLNASWFWKDIEVGERAAEKLFSLDPNPI-SGFVILSNMYAILGRWGQKTT 656
A + ALLNA D GE + S P + + ++ YA G +
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 657 IRKRLQ 662
I R++
Sbjct: 583 IENRIK 588
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 147/352 (41%), Gaps = 32/352 (9%)
Query: 266 GLDFDNSIGGALAEFYCDRDAI----------DDAKRVYESMGGEACLNVANSLIGGLIL 315
G++ +N G+L + C ++ + R ++S+ E SL+ GL
Sbjct: 90 GIEIENERNGSL-KLLCKKEVVLVNSIVEQPLTGLSRFFDSVKSELLRTDLVSLVKGLDD 148
Query: 316 MGRIEEAELIF--------YGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK---- 363
G E A +F G + + + ++ SQ + +L +K+ +
Sbjct: 149 SGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLL 208
Query: 364 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS---VTWNSMMSGYIHNGQH-SEALKL 419
++ + T++ YS+ G+ ++A+ LF++ K S VT+N ++ + G+ + L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSK 479
MR + T S + AC ++ + A L ++ AL+ + K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 480 CGHLADAQRSFTSIFSPNVAA----WTALINGYAYHGLGSESILLFRSMLVQGVLPNAAT 535
G +A + + A + L+ Y G E+ + M +GV+PNA T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 536 FVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKE 587
+ ++ A AG ++ L++F+SM+ V P Y V+ LLG+ R E
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSNE 439
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 58/354 (16%)
Query: 262 CIK-DGLDFDNSIGGALAEFYCDRDAIDDAKRVY-ESMGGEACLNVANSLIGGLILMGRI 319
C+K DG+ +N + G L + ++ + A + +S E C V NSL+ L+ + R+
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRV 187
Query: 320 EEA------ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLN 369
E+A L F +T ++N++I+G + EK+ L M+ ++ + N
Sbjct: 188 EDAMKLFDEHLRFQSCNDTK--TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 370 TMISVYSKNGELDEAVKLFDKTKG----ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRR 425
T+I + K+ EL++A ++F K + VT+ SM+SGY G+ EA L M R
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
L + + TF+VL VD Y+K G +
Sbjct: 306 LGIYPTNVTFNVL-----------------------------------VDGYAKAGEMLT 330
Query: 486 AQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
A+ + S P+V +T+LI+GY G S+ L+ M +G+ PNA T+ +++
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
A + L E+ + + P Y V+D ++G++ EA + +M
Sbjct: 391 ALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 14/288 (4%)
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKT 391
+YNL+ + + + + ++FE M ++ L ++S +++ G+L A L ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 392 -KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
+ E + NS+++ + + +A+KL+ R + TF++L R + ++
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT-----SIFSPNVAAWTALI 505
L +S + ++ L+ + K L A F S+ SP+V +T++I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
+GY G E+ L ML G+ P TF ++ + AG + EI M I +
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM-ISFGC 343
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAE---EFINQMPIEADGVIWGALLNA 610
P + +T ++D R G++ + E +N + + + L+NA
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 179/422 (42%), Gaps = 41/422 (9%)
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
++N + + G +D A + M V N ++SS A G L +LL
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT---ALL 161
Query: 130 LKSGFEKFG--LVGSALLYFCVRCCGIGEAELVFEE---LRDGNHV-LWSLMLSGYVQRD 183
L+S FE G +V ++LL V+ + +A +F+E + N +++++ G
Sbjct: 162 LQS-FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 184 MMGNAMDLFGKMP----VRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVL-PNEFT 238
A++L G M D+V + TLI G+ + + +A ++F+ ++ V P+ T
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE-LNKASEMFKDVKSGSVCSPDVVT 279
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+I + G + + ++ G+ N L + Y + A+ + M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 299 GEACLN---VANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIE 351
C SLI G +G++ + ++ + N +Y+++I +++
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 352 KSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEA---VKLFDKTKGERNSVTWNSMM 404
K++ L ++A K++ N +I + K G+++EA V+ +K K + + +T+ ++
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
G+ G+ EA+ ++ M + + T S L LL A ++K +
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC-----------LLKAGMAKEAYH 508
Query: 465 AN 466
N
Sbjct: 509 LN 510
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS-----WNTMISGYSQWGRYDEAL 88
P +++ N I K+ EL +A MF ++ +V S + +MISGY + G+ EA
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
+L M R + ++F+ ++ A++G + +++ ++ G + ++L+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 149 VRCCGIGEAELVFEELRD----GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA-- 202
R + + ++EE+ N +S++++ + + A +L G++ +D++
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 203 --WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
+ +I G+ + E + + M + + P++ T +I
Sbjct: 418 FMYNPVIDGFCKAGKVNEANV-IVEEMEKKKCKPDKITFTILI 459
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 58/354 (16%)
Query: 262 CIK-DGLDFDNSIGGALAEFYCDRDAIDDAKRVY-ESMGGEACLNVANSLIGGLILMGRI 319
C+K DG+ +N + G L + ++ + A + +S E C V NSL+ L+ + R+
Sbjct: 128 CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRV 187
Query: 320 EEA------ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLN 369
E+A L F +T ++N++I+G + EK+ L M+ ++ + N
Sbjct: 188 EDAMKLFDEHLRFQSCNDTK--TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 370 TMISVYSKNGELDEAVKLFDKTKG----ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRR 425
T+I + K+ EL++A ++F K + VT+ SM+SGY G+ EA L M R
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
L + + TF+VL VD Y+K G +
Sbjct: 306 LGIYPTNVTFNVL-----------------------------------VDGYAKAGEMLT 330
Query: 486 AQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
A+ + S P+V +T+LI+GY G S+ L+ M +G+ PNA T+ +++
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 542 ACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
A + L E+ + + P Y V+D ++G++ EA + +M
Sbjct: 391 ALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 14/288 (4%)
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKT 391
+YNL+ + + + + ++FE M ++ L ++S +++ G+L A L ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 392 -KGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQ 450
+ E + NS+++ + + +A+KL+ R + TF++L R + ++
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 451 GQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT-----SIFSPNVAAWTALI 505
L +S + ++ L+ + K L A F S+ SP+V +T++I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 506 NGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRV 565
+GY G E+ L ML G+ P TF ++ + AG + EI M I +
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM-ISFGC 343
Query: 566 TPTIEHYTCVVDLLGRSGRLKEAE---EFINQMPIEADGVIWGALLNA 610
P + +T ++D R G++ + E +N + + + L+NA
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 179/422 (42%), Gaps = 41/422 (9%)
Query: 70 SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLL 129
++N + + G +D A + M V N ++SS A G L +LL
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT---ALL 161
Query: 130 LKSGFEKFG--LVGSALLYFCVRCCGIGEAELVFEE---LRDGNHV-LWSLMLSGYVQRD 183
L+S FE G +V ++LL V+ + +A +F+E + N +++++ G
Sbjct: 162 LQS-FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 184 MMGNAMDLFGKMP----VRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVL-PNEFT 238
A++L G M D+V + TLI G+ + + +A ++F+ ++ V P+ T
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE-LNKASEMFKDVKSGSVCSPDVVT 279
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+I + G + + ++ G+ N L + Y + A+ + M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 299 GEACLN---VANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIE 351
C SLI G +G++ + ++ + N +Y+++I +++
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 352 KSKRLFEKMAPKNLTS----LNTMISVYSKNGELDEA---VKLFDKTKGERNSVTWNSMM 404
K++ L ++A K++ N +I + K G+++EA V+ +K K + + +T+ ++
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 405 SGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQ 464
G+ G+ EA+ ++ M + + T S L LL A ++K +
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC-----------LLKAGMAKEAYH 508
Query: 465 AN 466
N
Sbjct: 509 LN 510
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS-----WNTMISGYSQWGRYDEAL 88
P +++ N I K+ EL +A MF ++ +V S + +MISGY + G+ EA
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 89 ALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFC 148
+L M R + ++F+ ++ A++G + +++ ++ G + ++L+
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 149 VRCCGIGEAELVFEELRD----GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA-- 202
R + + ++EE+ N +S++++ + + A +L G++ +D++
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 203 --WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI 243
+ +I G+ + E + + M + + P++ T +I
Sbjct: 418 FMYNPVIDGFCKAGKVNEANV-IVEEMEKKKCKPDKITFTILI 459
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 217/514 (42%), Gaps = 76/514 (14%)
Query: 125 VHSLLLKSGFEKFGLVG--SALLYFCVRCCGIGEAELVFEELRDGNHVLWSLMLSGYVQR 182
V LL++G + L+ + LL+ CC G F D N + SG V
Sbjct: 17 VQPRLLETGTLRIALINCPNELLF----CCERG-----FSTFSDRNLSYRDKLSSGLVGI 67
Query: 183 DMMGNAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
+A+DLF M P+ V+ + L S A+ + E L L + M + + +T
Sbjct: 68 KA-DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQ-YELVLALCKQMESKGIAHSIYT 125
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDR----DAIDDAKRVY 294
L +I R L G +K G + D I L C +A++ R+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 295 ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQI 350
E MG + L N+L+ GL L G++ +A ++ + ET N ++Y ++ S Q
Sbjct: 186 E-MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 351 EKSKRLFEKMAPKNL----TSLNTMISVYSKNGELDEAVKLFDK--TKG-ERNSVTWNSM 403
+ L KM +N+ + +I K+G LD A LF++ KG + + +T+N++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 404 MSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF 463
+ G+ + G+ + KL M + + + TFSVL
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL------------------------- 339
Query: 464 QANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESIL 519
+D + K G L +A + + +PN + +LI+G+ E+I
Sbjct: 340 ----------IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
+ M+ +G P+ TF +++ A ++DGLE+F M + + T+ Y +V
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV-TYNTLVQGF 448
Query: 580 GRSGRLKEAEEFINQM---PIEADGVIWGALLNA 610
+SG+L+ A++ +M + D V + LL+
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 192/418 (45%), Gaps = 35/418 (8%)
Query: 71 WNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLL 130
+NT+++G R EAL L M K I+ + +++ +G + + ++
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 131 KSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG-------NHVLWSLMLSGYVQRD 183
++GF+ + +L C G+ L E LR + V +S+++ G +
Sbjct: 221 ETGFQPNEVTYGPVLNV---MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 184 MMGNAMDLFGKMPVR----DVVAWTTLISGY---ARREDGCERALDLFRCMRRSEVLPNE 236
+ NA +LF +M ++ D++ + TLI G+ R +DG + L R M + ++ PN
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK----LLRDMIKRKISPNV 333
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
T +I + G L + ++ G+ + +L + +C + +++A ++ +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 297 MGGEAC---LNVANSLIGGLILMGRIEEAELIF--YGLRET--NPISYNLMIKGYAMSSQ 349
M + C + N LI G RI++ +F LR N ++YN +++G+ S +
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 350 IEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKLF---DKTKGERNSVTWNS 402
+E +K+LF++M + ++ S ++ NGEL++A+++F +K+K E + +
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 403 MMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSK 460
++ G + + +A L+ ++ V ++++ S + +L +++
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 188/401 (46%), Gaps = 27/401 (6%)
Query: 9 PVRNCCKRVEKFRLFTTLLRDSEPHHPHV--ISTNISIAHRAKTGELAEARHMFDEMPLR 66
PV N + + L LLR E + + + +I I K G L A ++F+EM ++
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 67 ----TVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLG 122
+ ++NT+I G+ GR+D+ L M + + N ++FS ++ S + G L
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 123 KQVHSLLLKSGFEKFGLVGSALLY-FCVRCC---GIGEAELVFEELRDGNHVLWSLMLSG 178
Q+ +++ G + ++L+ FC I +L+ + D + + ++++++G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVA----WTTLISGYARREDGCERALDLFRCMRRSEVLP 234
Y + + + + ++LF +M +R V+A + TL+ G+ + E A LF+ M V P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC-QSGKLEVAKKLFQEMVSRRVRP 471
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
+ + ++ G L + G K ++ D I + C+ +DDA ++
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 295 ESM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMS 347
S+ G + N +I L + +A+++F + E + ++YN++I+ +
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 348 SQIEKSKRLFEKMA----PKNLTSLNTMISVYSKNGELDEA 384
+ L E+M P +++++ +I++ S +GELD++
Sbjct: 592 DDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDKS 631
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 128/605 (21%), Positives = 243/605 (40%), Gaps = 72/605 (11%)
Query: 57 RHMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARS 116
R M PL TV +N + S ++ +Y+ LAL M + + + S +++ R
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 117 GSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNHVLWSLML 176
L ++K G+E ++ + LL C + EA + + + + H + L
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196
Query: 177 SGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNE 236
+ V N + L GK+ V+ + +G+ E L++ C L E
Sbjct: 197 NTLV------NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM-CKSGQTALAME 249
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
R +L A+ ++ GLC KDG ++D+A ++
Sbjct: 250 LLRKMEER-NIKLDAVKYSIIIDGLC-KDG-------------------SLDNAFNLFNE 288
Query: 297 M---GGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPISYNLMIKGYAMSSQIEKS 353
M G +A + N+LIGG GR ++ + LR+ MIK
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKL---LRD--------MIK----------- 326
Query: 354 KRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER----NSVTWNSMMSGYIH 409
K++P N+ + + +I + K G+L EA +L K +R N++T+NS++ G+
Sbjct: 327 ----RKISP-NVVTFSVLIDSFVKEGKLREADQLL-KEMMQRGIAPNTITYNSLIDGFCK 380
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
+ EA+++ M D TF++L G L +S AN
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 470 GTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFRSML 525
LV + + G L A++ F + S P++ ++ L++G +G +++ +F +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRL 585
+ + ++ I+ +A ++D ++F S+ + V Y ++ L R L
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL-KGVKLDARAYNIMISELCRKDSL 559
Query: 586 KEAEEFINQMPIEA---DGVIWGALLNASWFWKDIEVGERAAEKLFSLD-PNPISGFVIL 641
+A+ +M E D + + L+ A D E++ S P +S ++
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 642 SNMYA 646
NM +
Sbjct: 620 INMLS 624
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/517 (22%), Positives = 212/517 (41%), Gaps = 105/517 (20%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVK-----LN 102
+ +A +F M PL ++ + ++S ++ RYD ++L M + N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 103 EISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFE 162
+ LSS S FLGK ++K GFE + ++LL I +A +F+
Sbjct: 123 IVMHCVCLSSQPCRASCFLGK-----MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 163 ELR----DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARRE 214
++ N V ++ ++ + + +A++LF +M +VV + L++G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 215 DGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIG 274
+ A L R M + + PN T +I ++G L K ++ + I+ + D
Sbjct: 238 RWGDAAW-LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTY 296
Query: 275 GALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET-- 332
G SLI GL + G ++EA +FY +
Sbjct: 297 G--------------------------------SLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 333 --NPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVK 386
N + Y +I G+ S ++E ++F +M+ K N + +I Y G D A +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 387 LFDKTKGER---NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
+F++ R + T+N ++ G NG+ +AL ++ MR+ +D + T++++ +
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG-- 442
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVA 499
+C K G + DA F S+FS PNV
Sbjct: 443 -MC--------------------------------KLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATF 536
+T +I+G+ GL E+ LF+ M G LPN + +
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 61/348 (17%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALAL 90
P+V++ I K L A +F++M V ++N +++G + GR+ +A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLK-SGFEKFGLVGSALLYFCV 149
M + ++ N I+F+A++ + + G L K++++++++ S + GS + C+
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 150 RCCGIGEAELVFEEL-RDG---NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA--- 202
+ EA +F + R+G N V+++ ++ G+ + + + M +F +M + VVA
Sbjct: 306 YGL-LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 203 -WTTLISGY--ARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVH 259
+T LI GY R D A ++F M P+ T + ++
Sbjct: 365 TYTVLIQGYCLVGRPD---VAQEVFNQMSSRRAPPDIRTYNVLL---------------- 405
Query: 260 GLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM-GGEACLNVANS--LIGGLILM 316
DGL C ++ A ++E M E +N+ +I G+ +
Sbjct: 406 -----DGL--------------CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 317 GRIEEAELIFYGL----RETNPISYNLMIKGYAMSSQIEKSKRLFEKM 360
G++E+A +F L + N I+Y MI G+ I ++ LF+KM
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 175/431 (40%), Gaps = 58/431 (13%)
Query: 187 NAMDLFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCV 242
+A+DLF +M P+ ++ +T L+S A+ + + + LF M+ + P T + V
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKM-NRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 243 IRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEA- 301
+ G +K G + D +L YC + I+DA +++ + G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 302 ------------CL-----------------------NVA--NSLIGGLILMGRIEEAEL 324
CL NV N+L+ GL +GR +A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 325 IFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYS 376
+ + E N I++ +I + ++ ++K L+ M ++ + ++I+
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 377 KNGELDEAVKLF---DKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
G LDEA ++F ++ N V + +++ G+ + + + +K++ M + V +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T++VL + + Q + +S ++ L+D G + A F +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 494 ----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
N+ +T +I G G ++ LF S+ +G+ PN T+ ++S GL+
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 550 NDGLEIFHSMQ 560
++ +F M+
Sbjct: 485 HEADSLFKKMK 495
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 135/333 (40%), Gaps = 22/333 (6%)
Query: 336 SYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVKLFDKT 391
SY +++ + Q + LF +M ++ ++SV +K D + LF++
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 392 KG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSF 448
+ T N +M + Q A M +L + TF+ L
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 449 QQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTAL 504
+ L + F+ NV T L+ K HL A F + + PNV + AL
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 505 INGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYR 564
+ G G ++ L R M+ + + PN TF A++ A G L + E+++ M I
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM-IQMS 288
Query: 565 VTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADG-----VIWGALLNASWFWKDIEV 619
V P + Y +++ L G L EA + M E +G VI+ L++ K +E
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLM--ERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 620 GERAAEKLFS--LDPNPISGFVILSNMYAILGR 650
G + ++ + N I+ + +L Y ++GR
Sbjct: 347 GMKIFYEMSQKGVVANTIT-YTVLIQGYCLVGR 378
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%)
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
L + C + + +++H + +V A+++ YS C + DA + F + N
Sbjct: 125 LAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWN 184
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
++ + +G G E+I LF +G PN F + S C+ G + +G F
Sbjct: 185 SGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQ 244
Query: 558 SMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDI 617
+M Y + P++EHY V +L SG L EA F+ +MP+E +W L+N S D+
Sbjct: 245 AMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDV 304
Query: 618 EVGERAAEKLFSLD 631
E+G+R AE + LD
Sbjct: 305 ELGDRCAELVEKLD 318
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 360 MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKL 419
++P ++ + N +I +YS +D+A+K+F++ E NS T MM +++NG EA+ L
Sbjct: 149 VSPCDVGARNAIIEMYSGCCSVDDALKVFEEMP-EWNSGTLCVMMRCFVNNGYGEEAIDL 207
Query: 420 YVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG----QLLHAHLSKTPFQANVYVGTALVD 475
+ + + F+ +F CT ++G Q ++ P + + T ++
Sbjct: 208 FTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKML- 266
Query: 476 FYSKCGHLADAQRSFTSI-FSPNVAAWTALINGYAYHG 512
+ GHL +A + P+V W L+N HG
Sbjct: 267 --ATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHG 302
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAW 501
C + Q+ +++H ++ + +++ ++++ YS CG + DA F S+ N+ W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 502 TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI 561
+I +A +G G ++I F +G P+ F I AC G +N+GL F SM
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 562 CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDIEVGE 621
Y + P +EHY +V +L G L EA F+ M D +W L+N S D+ +G+
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGD 368
Query: 622 RAAEKLFSLD 631
R + + LD
Sbjct: 369 RCQDMVEQLD 378
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 364 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTM 423
++++ N++I +YS G +++A+ +F+ ERN TW ++ + NGQ +A+ +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMP-ERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 424 RRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT----PFQANVYVGTALVDFYSK 479
++ F +F AC L +G L + K P + YV +LV ++
Sbjct: 274 KQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEH-YV--SLVKMLAE 330
Query: 480 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHG 512
G+L +A R F PNV W L+N HG
Sbjct: 331 PGYLDEALR-FVESMEPNVDLWETLMNLSRVHG 362
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 438 LFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPN 497
L + C + + ++ +++H + TP A Y +++ YS C DA F + N
Sbjct: 118 LAKLCGEVEALEEARVVHDCI--TPLDARSY--HTVIEMYSGCRSTDDALNVFNEMPKRN 173
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
W +I A +G G +I +F + +G P+ F A+ AC G +N+GL F
Sbjct: 174 SETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFE 233
Query: 558 SMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVIWGALLNASWFWKDI 617
SM Y + ++E Y V+++L G L EA +F+ +M +E +W L+N W +
Sbjct: 234 SMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYL 293
Query: 618 EVGERAAEKLFSLDPNPIS 636
E+G+R AE + LD + +S
Sbjct: 294 ELGDRFAELIKKLDASRMS 312
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 350 IEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIH 409
+E+++ + + + P + S +T+I +YS D+A+ +F++ +RNS TW +M+
Sbjct: 128 LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMP-KRNSETWGTMIRCLAK 186
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT---PFQAN 466
NG+ A+ ++ + F +F AC S+ +G L + +
Sbjct: 187 NGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSME 246
Query: 467 VYVGTALVDFYSKCGHLADAQRSFTSI-FSPNVAAWTALIN 506
YV +++ + CGHL +A + P+V W L+N
Sbjct: 247 DYVN--VIEMLAACGHLDEALDFVERMTVEPSVEMWETLMN 285
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 126/575 (21%), Positives = 231/575 (40%), Gaps = 40/575 (6%)
Query: 21 RLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFD--EMPLRTVSSWNTMISGY 78
R TT ++ PH++ T +T L F E ++S+ N
Sbjct: 5 RSITTNMKALRLIQPHLLKTG-----SLRTDLLCTISSFFSSCERDFSSISNGNVCFRER 59
Query: 79 SQWG----RYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGF 134
+ G + D+A+AL M RS + + FS S+ AR+ L L +G
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 135 EKFGLVGSALLYFCVRCCGIGEAELVFEELR----DGNHVLWSLMLSGYVQRDMMGNAMD 190
+ ++ RCC A V ++ + + ++ ++ G + A+
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 191 LFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRIC 246
L +M DVV + ++++G R D ALDL R M V + FT +I
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDT-SLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 247 ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM-GGEACLNV 305
R G + A + G+ +L C +D + + M E NV
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 306 A--NSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
N L+ + G+++EA E+I G+ N I+YN ++ GY M +++ ++ + +
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 359 KMA----PKNLTSLNTMISVYSKNGELDEAVKLFDKTKGE---RNSVTWNSMMSGYIHNG 411
M ++ + ++I Y +D+ +K+F N+VT++ ++ G+ +G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 412 QHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGT 471
+ A +L+ M V T+ +L ++ + L K+ + + T
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 472 ALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQ 527
+++ K G + DA F S+ PNV +T +I+G G SE+ +L R M
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 528 GVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
G PN T+ ++ A G L ++ M+ C
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 180/465 (38%), Gaps = 97/465 (20%)
Query: 297 MGGEACLNVANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEK 352
+G E N+LI GL L G++ EA ++ + E + ++YN ++ G S
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 353 SKRLFEKMAPKNLT----SLNTMISVYSKNGELDEAVKLFDK--TKGERNSV-TWNSMMS 405
+ L KM +N+ + +T+I ++G +D A+ LF + TKG ++SV T+NS++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 406 GYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQA 465
G G+ ++ L M + + TF+VL Q+ L+ +
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 466 NVYVGTALVDFYSKCGHLADAQRSFTSIF----SPNVAAWTALINGY------------- 508
N+ L+D Y L++A + SP++ +T+LI GY
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 509 ---AYHGLGSESIL-------------------LFRSMLVQGVLPNAATFVAILSACSHA 546
+ GL + ++ LF+ M+ GVLP+ T+ +L
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 547 GLLNDGLEIFHSMQ----------------------------------ICYRVTPTIEHY 572
G L LEIF +Q C V P + Y
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 573 TCVVDLLGRSGRLKEAEEFINQMPIEADG-----VIWGALLNASWFWKDIEVGERAAEKL 627
T ++ L + G L EA + +M E DG + L+ A D+ + E++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKM--EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 628 ----FSLDPNPISGFV--ILSNMYAILGRWGQKTTIRKRLQSLEL 666
FS D + I + +LS M + R+ + R LEL
Sbjct: 570 KSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLEL 614
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 117/577 (20%), Positives = 241/577 (41%), Gaps = 39/577 (6%)
Query: 23 FTTLLRDSEP--HHPHVISTNISIAHRAKTG----ELAEARHMFDEM----PLRTVSSWN 72
FT +L H+ + +S R + G ++ +A +F+ M PL T +N
Sbjct: 15 FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFN 74
Query: 73 TMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKS 132
+ S ++ +YD L M + ++ + + + +++ R L V K
Sbjct: 75 RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 134
Query: 133 GFEKFGLVGSALLY-FCVR---CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNA 188
G+E + S L+ FC+ + + + E + + V S +++G + + A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 189 MDLFGKMP----VRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIR 244
+ L +M D V + +++ + + ALDLFR M + + VI
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA-LALDLFRKMEERNIKASVVQYSIVID 253
Query: 245 ICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDD-AKRVYESMGGEACL 303
+ G+ + G+ D +L C+ DD AK + E +G
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 304 NVA--NSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRL 356
+V ++LI + G++ EA E+I G+ + I+YN +I G+ + + ++ ++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGI-APDTITYNSLIDGFCKENCLHEANQM 372
Query: 357 FEKMAPK----NLTSLNTMISVYSKNGELDEAVKLFDKTKGE---RNSVTWNSMMSGYIH 409
F+ M K ++ + + +I+ Y K +D+ ++LF + + N++T+N+++ G+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 410 NGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYV 469
+G+ + A +L+ M V S T+ +L + + + K+ + +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 470 GTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSML 525
++ + DA F S+ P+V + +I G G SE+ +LFR M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 526 VQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
G P+ T+ ++ A L +E+ M++C
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 212/517 (41%), Gaps = 80/517 (15%)
Query: 132 SGFEKFGLVGSALLYFCVRCCGIGEAELVFEE-LRDGNHVLWSLMLSGYVQRDMMGNAMD 190
S F + G++LL++ I EA+L ++E LR+G + + +A+D
Sbjct: 13 SNFTQILEKGTSLLHYS----SITEAKLSYKERLRNG------------IVDIKVNDAID 56
Query: 191 LFGKM----PVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRIC 246
LF M P+ + + L S AR + + L + M + + + +T+ +I
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQ-YDLVLGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 247 ARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYE---SMGGEACL 303
R L V G K G + D L +C + +A + + M L
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 304 NVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFE 358
++LI GL L GR+ EA ++ YG + + ++Y ++ S + LF
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 359 KMAPKNLTS----LNTMISVYSKNGELDEAVKLFDKT--KG-ERNSVTWNSMMSGYIHNG 411
KM +N+ + + +I K+G D+A+ LF++ KG + + VT++S++ G ++G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 412 QHSEALKLYVTMRRLSVDHSRSTFSVLFRA------------------------------ 441
+ + K+ M ++ TFS L
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 442 ------CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS 495
C C + Q+ +SK + ++ + L++ Y K + D R F I S
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 496 ----PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
PN + L+ G+ G + + LF+ M+ +GV P+ T+ +L G LN
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
LEIF MQ R+T I Y ++ + + ++ +A
Sbjct: 474 ALEIFEKMQKS-RMTLGIGIYNIIIHGMCNASKVDDA 509
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 150/332 (45%), Gaps = 26/332 (7%)
Query: 334 PISYNLMIKGYAMSSQIEKSKRLFEKMA----PKNLTSLNTMISVYSKNGELDEAVKLFD 389
PI +N + A + Q + + M ++ ++ MI+ Y + +L A +
Sbjct: 70 PIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLG 129
Query: 390 ---KTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLC 446
K E +++T++++++G+ G+ SEA+ L M + T S L
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 447 SFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAA----WT 502
+ +L + + FQ + +++ K G+ A A F + N+ A ++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
+I+ G +++ LF M ++G+ + T+ +++ + G +DG ++ M I
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IG 308
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWGALLNASWFWKDIEV 619
+ P + ++ ++D+ + G+L EA+E N+M I D + + +L++ F K+ +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG--FCKENCL 366
Query: 620 GERAAEKLFSL------DPNPISGFVILSNMY 645
E A ++F L +P+ ++ + IL N Y
Sbjct: 367 HE--ANQMFDLMVSKGCEPDIVT-YSILINSY 395
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 213/501 (42%), Gaps = 102/501 (20%)
Query: 58 HMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSG 117
M PL ++ ++ ++S ++ YD ++L M + + S++ V++ R
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 118 SLFLGKQVHSLLLKSGFEKFGLVGSALLY-FCVRCCGIGEAELVFEELRDG---NHVLWS 173
+ V ++K G+E + S+L+ FC +LV + G + V+++
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 174 LMLSGYVQRDMMGNAMDLFGKMP---VR-DVVAWTTLISGY---ARREDGCERALDLFRC 226
++ G + ++ +A++LF +M VR D V + +L++G R D A L R
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD----AARLMRD 234
Query: 227 MRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDA 286
M +++PN T VI + + G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFS--------------------------------- 261
Query: 287 IDDAKRVYESMGGEACLN----VANSLIGGLILMGRIEEA----ELIFYGLRETNPISYN 338
+A ++YE M C++ NSLI GL + GR++EA +L+ + ++YN
Sbjct: 262 --EAMKLYEEMT-RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 339 LMIKGYAMSSQIEKSKRLFEKMAPKNLT----SLNTMISVYSKNGELDEAVKLFDKTKGE 394
+I G+ S ++++ +LF +MA + L + NT+I Y + G D A ++F +
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Query: 395 RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLL 454
N T++ ++ G N + +AL L+ M++ ++ +T++++ +C
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG---MC-------- 427
Query: 455 HAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAY 510
K G++ DA F S+ P+V ++T +I+G+
Sbjct: 428 ------------------------KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 511 HGLGSESILLFRSMLVQGVLP 531
+S LL+R M G+LP
Sbjct: 464 KRQWDKSDLLYRKMQEDGLLP 484
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 202/468 (43%), Gaps = 34/468 (7%)
Query: 164 LRDGNHVL-------WSLMLSGYVQRDMMGNAMDLFGKM----PVRDVVAWTTLISGYAR 212
L+ GN V+ W S + +DLF KM P+ +V ++ ++S A+
Sbjct: 22 LQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAK 81
Query: 213 REDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNS 272
++ + + LF M + + ++ + VI R V G +K G + D
Sbjct: 82 SKNY-DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 273 IGGALAEFYCDR----DAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFY- 327
+L +C DAID ++ E MG + + N++I G +G + +A +F
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 328 ----GLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNG 379
G+R + ++YN ++ G S + + RL M + N+ + +I V+ K G
Sbjct: 200 MERDGVR-ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 380 ELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFS 436
+ EA+KL+++ + + T+NS+++G +G+ EA ++ M T++
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 437 VLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS- 495
L +G L +++ + ++ Y + G AQ F+ + S
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
PN+ ++ L+ G + ++++LF +M + + T+ ++ G + D ++
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 556 FHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
F S+ C + P + YT ++ R + +++ +M + DG++
Sbjct: 439 FRSLS-CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM--QEDGLL 483
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 145/349 (41%), Gaps = 48/349 (13%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALA 89
P V+ N I K G + +A +FD M V ++N++++G GR+ +A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
L M + N I+F+AV+ + G +++ + +
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR------------------ 272
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYV-QRDMMGNAMDLFGKMPVRDVVAWTTLIS 208
RC V ++ N ++ L + G V + M + M G +P DVV + TLI+
Sbjct: 273 RC--------VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP--DVVTYNTLIN 322
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
G+ + + + LFR M + ++ + T + +I+ G AG+ I +D
Sbjct: 323 GFCKSKR-VDEGTKLFREMAQRGLVGDTITYNTIIQ-----GYFQAGRPDAAQEIFSRMD 376
Query: 269 FDNSIGGALAEFY--CDRDAIDDAKRVYESMGG---EACLNVANSLIGGLILMGRIEEAE 323
+I Y C ++ A ++E+M E + N +I G+ +G +E+A
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 324 LIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSL 368
+F L + + +SY MI G+ Q +KS L+ KM L L
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 130/296 (43%), Gaps = 14/296 (4%)
Query: 18 EKFRLFTTLLRDSEPHHPHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNT 73
+ LF + RD ++ N +A +G ++A + +M +R V ++
Sbjct: 192 DAVELFDRMERDGV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 74 MISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSG 133
+I + + G++ EA+ L M R CV + +++++++ G + KQ+ L++ G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 134 FEKFGLVGSALLYFCVRCCGIGEAELVFEELRD----GNHVLWSLMLSGYVQRDMMGNAM 189
+ + L+ + + E +F E+ G+ + ++ ++ GY Q A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 190 DLFGKMPVR-DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICAR 248
++F +M R ++ ++ L+ G E+AL LF M++SE+ + T + VI +
Sbjct: 370 EIFSRMDSRPNIRTYSILLYGLCMNWR-VEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 249 LGALH-AGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACL 303
+G + A + L K GL D + +C + D + +Y M + L
Sbjct: 429 IGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 222/502 (44%), Gaps = 67/502 (13%)
Query: 58 HMFDEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSG 117
HM + PL ++ + +++ ++ ++D + L + V + + + +++ +S
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 118 SLFLGKQVHSLLLKSGFEKFGLVGSALLY-FCVRCCGIGEAELVFEELRDG---NHVLWS 173
+L ++K GFE + ++L+ FC+ +V + + G + V+++
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 174 LMLSGYVQRDMMGNAMDLFGKMP---VR-DVVAWTTLISGYARREDGCERALD-LFRCMR 228
++ + + A+ LF +M +R DVV +T+L++G G R D L R M
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC--NSGRWRDADSLLRGMT 239
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
+ ++ P+ T + +I + G + ++ I+ + + +L +C +D
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 289 DAKRVYESMGGEACLN---VANSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMI 341
+A++++ M + C SLI G ++++A IFY + + N I+Y +I
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 342 KGYAMSSQIEKSKRLFEKM----APKNLTSLNTMISVYSKNGELDEAVKLF-DKTKGERN 396
+G+ + ++ +F M P N+ + N ++ NG++ +A+ +F D K E +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 397 SV-----TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQG 451
V T+N ++ G +NG+ +AL ++ MR+ +D T++++ + +C
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG---MC----- 471
Query: 452 QLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALING 507
K G + +A F S+ S PNV +T +I+G
Sbjct: 472 ---------------------------KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Query: 508 YAYHGLGSESILLFRSMLVQGV 529
GL E+ +LFR M GV
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGV 526
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 171/394 (43%), Gaps = 30/394 (7%)
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIK---DGLDFDNSIGGA 276
ALDLF M S LP+ ++ + A++ VV LC G+ D
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKF---DVVINLCDHLQIMGVSHDLYTCNL 112
Query: 277 LAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEA-----ELIFYG 328
L +C A M G E + SLI G L R+EEA +++ G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 329 LRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNL-------TSLNTMISVYSKNGEL 381
++ + + Y +I + + + LF++M + TSL + + +
Sbjct: 173 IKP-DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 382 DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA 441
D ++ K K + + +T+N+++ ++ G+ +A +LY M R+S+ + T++ L
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 442 -CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSP 496
C C + Q+ + +K F +V T+L++ + KC + DA + F + +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
N +T LI G+ G + + +F M+ +GV PN T+ +L + G + L IF
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 557 HSMQI--CYRVTPTIEHYTCVVDLLGRSGRLKEA 588
MQ V P I Y ++ L +G+L++A
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 190/443 (42%), Gaps = 59/443 (13%)
Query: 179 YVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
Y+ +G M L G P D+V +T+LI+G+ + E A+ + M + P+
Sbjct: 124 YLASSFLGKMMKL-GFEP--DIVTFTSLINGFCL-GNRMEEAMSMVNQMVEMGIKPD--- 176
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
VV I D L + + AL+ F D + E+ G
Sbjct: 177 ------------------VVMYTTIIDSLCKNGHVNYALSLF----DQM-------ENYG 207
Query: 299 GEACLNVANSLIGGLILMGRIEEAELIFYGL--RETNP--ISYNLMIKGYAMSSQIEKSK 354
+ + SL+ GL GR +A+ + G+ R+ P I++N +I + + ++
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 355 RLFEKM-----APKNLTSLNTMISVYSKNGELDEAVKLFD--KTKG-ERNSVTWNSMMSG 406
L+ +M AP N+ + ++I+ + G +DEA ++F +TKG + V + S+++G
Sbjct: 268 ELYNEMIRMSIAP-NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 407 YIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
+ + +A+K++ M + + + T++ L + + Q + +H+ N
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 467 VYVGTALVDFYSKCGHLA-------DAQRSFTSIFSPNVAAWTALINGYAYHGLGSESIL 519
+ L+ G + D Q+ +PN+ + L++G Y+G ++++
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 520 LFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLL 579
+F M + + T+ I+ AG + + + +F S+ V P + YT ++ L
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP-SKGVKPNVVTYTTMISGL 505
Query: 580 GRSGRLKEAEEFINQMPIEADGV 602
R G EA +M + DGV
Sbjct: 506 FREGLKHEAHVLFRKM--KEDGV 526
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 165/377 (43%), Gaps = 48/377 (12%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMP---LRT-VSSWNTMISGYSQWGRYDEALAL 90
P V+ I K G + A +FD+M +R V + ++++G GR+ +A +L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY-FCV 149
M + +K + I+F+A++ + + G +++++ +++ ++L+ FC+
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
C + EA +F M+ G P DVVA+T+LI+G
Sbjct: 295 EGC-VDEARQMFY-------------------------LMETKGCFP--DVVAYTSLING 326
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
+ + + + A+ +F M + + N T +I+ ++G + + V + G+
Sbjct: 327 FCKCKK-VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA------NSLIGGLILMGRIEEAE 323
+ L C + A ++E M VA N L+ GL G++E+A
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 324 LIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVY 375
++F +R + I+Y ++I+G + +++ + LF + K N+ + TMIS
Sbjct: 446 MVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Query: 376 SKNGELDEAVKLFDKTK 392
+ G EA LF K K
Sbjct: 506 FREGLKHEAHVLFRKMK 522
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 386 KLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
+L D + R + ++ +H+ Q +EAL L+ M S F+ L +
Sbjct: 26 RLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKM 85
Query: 446 CSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAW 501
F L HL ++Y L++ + + A + F P++ +
Sbjct: 86 KKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTF 145
Query: 502 TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI 561
T+LING+ E++ + M+ G+ P+ + I+ + G +N L +F M+
Sbjct: 146 TSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME- 204
Query: 562 CYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWGALLNA 610
Y + P + YT +V+ L SGR ++A+ + M I+ D + + AL++A
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 134/625 (21%), Positives = 251/625 (40%), Gaps = 86/625 (13%)
Query: 68 VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHS 127
+ +NT+++ +++G DE + M V N +++ +++ + G++ Q S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 128 LLLKSGFEK-FGLVGSALLYFCVRCCGIGEAELVFEELR----DGNHVLWSLMLSGYVQR 182
++++G + F S ++ +C R + A VF E+ N V ++ ++ G
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRK-DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 183 DMMGNAMDLFGKMPVRD----VVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFT 238
+ AMDLF KM + V +T LI E E AL+L + M + + PN T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE-ALNLVKEMEETGIKPNIHT 360
Query: 239 LDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMG 298
+I + + G ++ GL + AL YC R I+DA V E M
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 299 GE-------------------------ACLN------------VANSLIGGLILMGRIEE 321
LN NSLI G G +
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 322 AELIFYGLRETNPI----SYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMIS 373
A + + + + +Y MI S ++E++ LF+ + K N+ +I
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 374 VYSKNGELDEAVKLFDKTKGER---NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
Y K G++DEA + +K + NS+T+N+++ G +G+ EA L M ++ +
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSF 490
+ ST ++L F + + + + + T + Y + G L DA+
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 491 TSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAI------- 539
+ SP++ +++LI GY G + + + + M G P+ TF+++
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 540 -----------LSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEA 588
L A S+ + +E+ M + + VTP + Y ++ + G L+ A
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKM-VEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 589 EEFINQMP----IEADGVIWGALLN 609
E+ + M I +++ ALL+
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLS 804
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 127/631 (20%), Positives = 240/631 (38%), Gaps = 127/631 (20%)
Query: 52 ELAEARHMFDEMPL----RTVSSWNTMISGYSQWGRYDEALALASFMHRS----CVKLNE 103
+L A +F+EMPL R ++ +I G R DEA+ L M V+
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 104 ISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEE 163
+ ++ S +S +L L K++ +K + ++ +L C +C EL+ +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL---CSQCKFEKARELLGQM 384
Query: 164 LRDG---NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDG 216
L G N + ++ +++GY +R M+ +A+D+ M R + + LI GY +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK--SN 442
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAG--------------------K 256
+A+ + M +VLP+ T + +I R G +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 257 VVHGLC----IKDGLDFDNSIGG-----------ALAEFYCDRDAIDDAKRVYESMGGEA 301
++ LC +++ D +S+ AL + YC +D+A + E M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 302 CLNVA---NSLIGGLILMGRIEEAEL-----IFYGLR---ETNPISYNLMIKGYAMSSQI 350
CL + N+LI GL G+++EA L + GL+ T+ I + ++K
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 351 EKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNS---VTWNSMMSGY 407
+ +++ + + T I Y + G L +A + K + S T++S++ GY
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 408 IHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFR------------ACTSLCSFQQG---- 451
GQ + A + MR + S+ TF L + + LC+
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 452 ---QLLHAHL--SKTPFQ-------------ANVYVGTALVDFYSKCGHLADAQRSFTSI 493
+LL + S TP N+ V + D + ++ ++ F ++
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 494 FS------------------------PNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
S P + + LI G G +F+++L G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQ 560
+ + I+ GL+ E+F+ M+
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/542 (19%), Positives = 218/542 (40%), Gaps = 107/542 (19%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALA 89
P V + NI I K G++ AR +F+EM R ++N+MI G+ + GR D+ +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
M C + + I+++A+++ F KFG + L ++
Sbjct: 319 FFEEMKDMCCEPDVITYNALINC---------------------FCKFGKLPIGLEFY-- 355
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
R+M GN + +VV+++TL+
Sbjct: 356 --------------------------------REMKGNGLK-------PNVVSYSTLVDA 376
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
+ + E ++A+ + MRR ++PNE+T +I ++G L + ++ G+++
Sbjct: 377 FCK-EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGL 329
+ AL + CD + + +A+ ++ G+++ A +I
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELF----------------------GKMDTAGVI---- 469
Query: 330 RETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAV 385
N SYN +I G+ + ++++ L ++ + +L T I +++ A
Sbjct: 470 --PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 386 KLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA- 441
+ ++ K + NS+ + ++M Y +G +E L L M+ L ++ + TF VL
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 442 CTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFS----PN 497
C + + + + QAN + TA++D K + A F + P+
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 498 VAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFH 557
A+T+L++G G E++ L M G+ + + +++ SH L
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 558 SM 559
M
Sbjct: 708 EM 709
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 155/345 (44%), Gaps = 59/345 (17%)
Query: 288 DDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNL 339
DD KR ++ M G + N +I + G +E A E+ F GL + ++YN
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNS 302
Query: 340 MIKGYAMSSQIEKSKRLFEKM----APKNLTSLNTMISVYSKNGELDEAVKLFDKTKG-- 393
MI G+ +++ + FE+M ++ + N +I+ + K G+L ++ + + KG
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 394 -ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQ 452
+ N V++++++ + G +A+K YV MRR+ +
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL------------------------ 398
Query: 453 LLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSP----NVAAWTALINGY 508
N Y T+L+D K G+L+DA R + NV +TALI+G
Sbjct: 399 -----------VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 509 AYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPT 568
E+ LF M GV+PN A++ A++ A ++ LE+ + ++ + P
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK-GRGIKPD 506
Query: 569 IEHYTCVVDLLGRSGRLKEAEEFINQMP---IEADGVIWGALLNA 610
+ Y + L +++ A+ +N+M I+A+ +I+ L++A
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 120/300 (40%), Gaps = 29/300 (9%)
Query: 368 LNTMISVYSKNGELDEAVKLFDKTKGER---NSVTWNSMMSGYIHNGQHSEALKLYVTMR 424
+ + SV G L+EA++ F K K R + + N ++ + G+ + + + M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 425 RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLA 484
+ T++++ + + L + + +++D + K G L
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 485 DAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAIL 540
D F + P+V + ALIN + G + +R M G+ PN ++ ++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 541 SACSHAGLLNDGLEIFHSMQICYRV--TPTIEHYTCVVDLLGRSGRLKEAEEFINQM--- 595
A G++ ++ + M+ RV P YT ++D + G L +A N+M
Sbjct: 375 DAFCKEGMMQQAIKFYVDMR---RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 596 PIEADGVIWGALLNASWFWKDIEVGERAAEKLFSLD-----PN------PISGFVILSNM 644
+E + V + AL++ D E + A E +D PN I GFV NM
Sbjct: 432 GVEWNVVTYTALIDGLC---DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/543 (19%), Positives = 234/543 (43%), Gaps = 69/543 (12%)
Query: 52 ELAEARHMFDEM----PLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFS 107
+L +A +F +M P ++ ++ ++S ++ ++D ++L M + N ++S
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 108 AVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDG 167
++ R L L + ++K G+ + ++LL I EA + +++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 168 NH----VLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCER 219
+ V ++ ++ G Q + A+ L +M V+ D+V + +I+G +R + +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DL 233
Query: 220 ALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAE 279
AL+L M + G + A V++ I DGL
Sbjct: 234 ALNLLNKMEK--------------------GKIEADVVIYNTII-DGL------------ 260
Query: 280 FYCDRDAIDDAKRVY---ESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN--P 334
C +DDA ++ E+ G + + N LI L GR +A + + E N P
Sbjct: 261 --CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 335 --ISYNLMIKGYAMSSQIEKSKRLFEKMAPK-----NLTSLNTMISVYSKNGELDEAVKL 387
+ +N +I + ++ ++++L+++M ++ + NT+I + K ++E +++
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 388 FDKTKGER----NSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACT 443
F + +R N+VT+ +++ G+ A ++ M V T+++L
Sbjct: 379 F-REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 444 SLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVA 499
+ + + ++ ++ K + ++ T +++ K G + D F S+ PNV
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 500 AWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
+T +++G+ GL E+ LF M G LPN+ T+ ++ A G E+ M
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 560 QIC 562
+ C
Sbjct: 558 RSC 560
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 176/423 (41%), Gaps = 80/423 (18%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLRTVSS----WNTMISGYSQWGRYDEALA 89
P +++ I K GE A ++ ++M + + +NT+I G ++ D+A
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
L + M +K + +++ ++S G ++ S +L+ + +AL+ V
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 150 RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISG 209
+ + EAE +++E+ H DVVA+ TLI G
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCF--------------------------PDVVAYNTLIKG 365
Query: 210 YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDF 269
+ + + E +++FR M + ++ N T +I HG
Sbjct: 366 FCKYKR-VEEGMEVFREMSQRGLVGNTVTYTTLI---------------HG--------- 400
Query: 270 DNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEAELIF 326
F+ RD D+A+ V++ M G + N L+ GL G +E A ++F
Sbjct: 401 ----------FFQARDC-DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 327 YGLRETNP----ISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKN 378
+++ + ++Y MI+ + ++E LF ++ K N+ + TM+S + +
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 379 GELDEAVKLFDKTKGE---RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTF 435
G +EA LF + K + NS T+N+++ + +G + + +L MR STF
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Query: 436 SVL 438
++
Sbjct: 570 GLV 572
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 148/373 (39%), Gaps = 59/373 (15%)
Query: 10 VRNCCKRVEKFRLFTTLLRDSEPH--HPHVISTNISIAHRAKTGELAEARHMFDEMPLRT 67
+ CKR E L LL E V+ N I K + +A +F++M +
Sbjct: 222 INGLCKRGEP-DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 68 VS----SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGK 123
+ ++N +IS +GR+ +A L S M + + + F+A++ + + G L
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV--- 337
Query: 124 QVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEELRDGNH-----VLWSLMLSG 178
EAE +++E+ H V ++ ++ G
Sbjct: 338 --------------------------------EAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 179 YVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLP 234
+ + + M++F +M R + V +TTLI G+ + D C+ A +F+ M V P
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQMVFKQMVSDGVHP 424
Query: 235 NEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVY 294
+ T + ++ G + VV K + D + E C ++D ++
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 295 ESM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLRETNPI----SYNLMIKGYAMS 347
S+ G + + +++ G G EEA+ +F ++E P+ +YN +I+
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 348 SQIEKSKRLFEKM 360
S L ++M
Sbjct: 545 GDEAASAELIKEM 557
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 121/302 (40%), Gaps = 49/302 (16%)
Query: 333 NPISYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAVKLF 388
N +Y++ I + SQ+ + + KM ++ +LN++++ + + EAV L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 389 DKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSL 445
D+ + ++VT+ +++ G + + SEA+ L + R+ V + L
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL---VERMVVKGCQPDLVTYGAVINGL 225
Query: 446 CSFQQGQL---LHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
C + L L + K +A+V + ++D K H+ DA
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA---------------- 269
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
LF M +G+ P+ T+ ++S + G +D + M +
Sbjct: 270 ---------------FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LE 313
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIE----ADGVIWGALLNASWFWKDIE 618
+ P + + ++D + G+L EAE+ ++M D V + L+ +K +E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 619 VG 620
G
Sbjct: 374 EG 375
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 161/359 (44%), Gaps = 47/359 (13%)
Query: 303 LNVANSLIGGLILMGRIEEAELIFYGLRET--NPI--SYNLMIKGYAMSSQIEKSKRLFE 358
++ AN+LI +G +EE ++ ++E P +YN ++ G + ++ ++R+FE
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 359 KMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALK 418
M ++G + + VT+N+M+ GY GQ +A++
Sbjct: 247 VM----------------ESGRIKPDI------------VTYNTMIKGYCKAGQTQKAME 278
Query: 419 LYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYS 478
M + + T+ + +AC + F L+ + + Q + + ++
Sbjct: 279 KLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
Query: 479 KCGHLADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAA 534
K G L + F ++ PNVA +T LI+GYA G ++I L M+ +G P+
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Query: 535 TFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQ 594
T+ +++ G + + L+ FH+ + ++ Y+ ++D LG++GR+ EAE +
Sbjct: 399 TYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM-FYSSLIDGLGKAGRVDEAERLFEE 457
Query: 595 MPIEA---DGVIWGALLNASWFWKDIEVGERAA-----EKLFSLDPNPISGFVILSNMY 645
M + D + AL++A F K +V E A E+ D + ++LS M+
Sbjct: 458 MSEKGCTRDSYCYNALIDA--FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 151/318 (47%), Gaps = 31/318 (9%)
Query: 154 IGEAELVFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTT 205
+ AE VFE + G + V ++ M+ GY + AM+ M R D + + T
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 206 LISG-YARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIK 264
+I YA + G AL + +V P+ F+L VI + G L+ G V I+
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFENMIR 355
Query: 265 DGLDFDNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEE 321
G + +I L + Y +++DA R+ M G + + + ++ GL GR+EE
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 322 AELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLTS----LNTMIS 373
A F+ R N + Y+ +I G + ++++++RLFE+M+ K T N +I
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 374 VYSKNGELDEAVKLFDKTKGE----RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVD 429
++K+ ++DEA+ LF + + E + T+ ++SG ++ EALKL+ M +D
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM----ID 531
Query: 430 HSRSTFSVLFRA-CTSLC 446
+ + FRA T LC
Sbjct: 532 KGITPTAACFRALSTGLC 549
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 165/403 (40%), Gaps = 30/403 (7%)
Query: 68 VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHS 127
+ ++NTMI GY + G+ +A+ M + ++I++ ++ +C ++
Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 316
Query: 128 LLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL-RDG---NHVLWSLMLSGYVQRD 183
+ + G + S ++ + + E VFE + R G N ++++++ GY +
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376
Query: 184 MMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTL 239
+ +A+ L +M DVV ++ +++G + E ALD F R + N
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC-KNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 240 DCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDA----KRVYE 295
+I + G + + + + G D+ AL + + +D+A KR+ E
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 296 SMGGEACLNVANSLIGGLILMGRIEEA-----ELIFYGLRETNPISYNLMIKGYAMSSQI 350
G + + L+ G+ R EEA +I G+ T + + G +S ++
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT-AACFRALSTGLCLSGKV 554
Query: 351 EKSKRLFEKMAPKNL---TSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTW---NSMM 404
++ ++ +++AP + + MI+ K G + EA KL D V M+
Sbjct: 555 ARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMI 614
Query: 405 SGYIHNGQHSEALKLY-----VTMRRLSVDHSRSTFSVLFRAC 442
+ G+ A+KL + R+ R F+ L C
Sbjct: 615 NALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETC 657
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/591 (19%), Positives = 235/591 (39%), Gaps = 95/591 (16%)
Query: 48 AKTGELAEARHMFDEMPLRTVSS----WNTMISGYSQWGRYDEALALASFMHRSCVKLNE 103
+ G++ AR F+ M R ++ + ++I Y+ DEAL+ M ++++
Sbjct: 320 GRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSL 379
Query: 104 ISFSAVLSSCARSGS-------LFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGE 156
+++S ++ +++G K++H L S + K ++Y + C +
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK-------IIYAHCQTCNMER 432
Query: 157 AELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVAWTTLISGYARREDG 216
AE + R+M +D + + T++ GY D
Sbjct: 433 AEALV--------------------REMEEEGIDA-------PIAIYHTMMDGYTMVADE 465
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
++ L +F+ ++ P T C+I + ++G + V + ++G+ +
Sbjct: 466 -KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 277 LAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEAELIFYGLRETN 333
+ + +A V+E M G + + + N++I MG ++ A +++
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 334 --PISYNLM--IKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEAV 385
P + M I GYA S + +S +F+ M + + N +I+ + ++++AV
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 386 KLFDKTK---GERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRAC 442
++ D+ N T+ +M GY G +A + + ++ +D T+ L +AC
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 443 TSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWT 502
Q + +S N +V +
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFV-------------------------------YN 733
Query: 503 ALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQIC 562
LI+G+A G E+ L + M +GV P+ T+ + +SACS AG +N + M+
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME-A 792
Query: 563 YRVTPTIEHYTCVVDLLGRSGRLKEA---EEFINQMPIEADGVIWGALLNA 610
V P I+ YT ++ R+ ++A E + M I+ D ++ LL +
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/470 (19%), Positives = 182/470 (38%), Gaps = 87/470 (18%)
Query: 161 FEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA----WTTLISGYARREDG 216
FE++ + + LM+ Y +R M A + F +M R + +T+LI YA D
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD- 359
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+ AL R M+ + + T ++ ++ G A
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEA---------------------- 397
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGR-----IEEAELIFYGLRE 331
A+++ D+AKR+++++ N+ I G I+ +E AE + + E
Sbjct: 398 -ADYW-----FDEAKRIHKTL---------NASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 332 TN---PIS-YNLMIKGYAMSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKL 387
PI+ Y+ M+ GY M + +K +F+++ T
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP-------------------- 482
Query: 388 FDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCS 447
VT+ +++ Y G+ S+AL++ M+ V H+ T+S++ L
Sbjct: 483 --------TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 448 FQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTA 503
+ + + K + +V + ++ + G++ A ++ + P +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 504 LINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICY 563
+I+GYA G S+ +F M G +P TF +++ + +EI M +
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA- 653
Query: 564 RVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP---IEADGVIWGALLNA 610
V+ YT ++ G +A E+ ++ ++ D + ALL A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 18/297 (6%)
Query: 316 MGRIEEAELIFYGLRET-NP----ISYNLMIKGYAMSSQIEKSKRLFEKM-----APKNL 365
M E A L+ L ET P I YN+ +K + S +EKS++LF++M P N
Sbjct: 152 MTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNA 211
Query: 366 TSLNTMISVYSKNGELDEAVKLFDKTKG---ERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
T T+IS +NG AV+ F+K E ++VT +M+ Y G AL LY
Sbjct: 212 T-FTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDR 270
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
R TFS L R ++ ++ + + N+ + L+D +
Sbjct: 271 ARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
Query: 483 LADAQRSF----TSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
A+ + T+ F+PN + + AL+ Y G +++ ++R M +G+ +
Sbjct: 331 PWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNT 390
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
+LS C+ +++ EIF M+ C P ++ ++ + SGR+ EAE + QM
Sbjct: 391 LLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQM 447
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 180/417 (43%), Gaps = 21/417 (5%)
Query: 199 DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVV 258
DV + T L++G R E A +F + P+ T ++ R H+ +
Sbjct: 318 DVRSRTKLMNGLIERGRPQE-AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 259 HGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA---NSLIGGLIL 315
K+GL D + A+ + +D A +++E M C A N+LI G
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 316 MGRIEEA-ELIFYGLR----ETNPISYNLMIKGYAMSSQIEKSKRLFEKM----APKNLT 366
+G++EE+ L+ LR + N + N++++ + +IE++ + KM ++
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 367 SLNTMISVYSKNGEL----DEAVKLFDKTKGERNSVTWNSMMSGYIHNGQHSEALKLYVT 422
+ NT+ Y++ G D + K + N T ++++GY G+ EAL+ +
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 423 MRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGH 482
M+ L V + F+ L + ++ + + + + +V + L++ +S G
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 483 LADAQRSFTSIF----SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVA 538
+ + +T + P++ A++ L GYA G ++ + M GV PN +
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 539 ILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
I+S AG + ++++ M ++P + Y ++ G + + +AEE + M
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/507 (19%), Positives = 202/507 (39%), Gaps = 90/507 (17%)
Query: 68 VSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHS 127
V S +++G + GR EA ++ + + K + I+++ ++++ R K HS
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ------KHFHS 372
Query: 128 LL-LKSGFEKFGLVGSALLYFCV-----RCCGIGEAELVFEELRDGNHVLWSLMLSGYVQ 181
LL L S EK GL +L+ + + +A +FE++++
Sbjct: 373 LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKES-------------- 418
Query: 182 RDMMGNAMDLFGKMPVRDVVAWTTLISGYAR--REDGCERALDLFRCMRRSEVL-PNEFT 238
G P + TLI GY + + + R LD+ M R E+L PN+ T
Sbjct: 419 -----------GCKPT--ASTFNTLIKGYGKIGKLEESSRLLDM---MLRDEMLQPNDRT 462
Query: 239 LDCVIRI-CARLGALHAGKVVHGL---CIKDGLDFDNSIGGALAEF--YCDRDAIDDAKR 292
+ +++ C + A +V+ + +K + N++ A A C + + +
Sbjct: 463 CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRM 522
Query: 293 VYESMGGEACLNVANSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSS 348
++ + + + +++ G G++EEA FY ++E N +N +IKG+
Sbjct: 523 LHNKV--KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF---- 576
Query: 349 QIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGERNSVTWNSMMSGYI 408
++N M V E V L ++ + + VT++++M+ +
Sbjct: 577 -----------------LNINDMDGV-------GEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 409 HNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVY 468
G ++Y M +D FS+L + ++ + + + K + NV
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 469 VGTALVDFYSKCGHLADAQRSFTSI-----FSPNVAAWTALINGYAYHGLGSESILLFRS 523
+ T ++ + G + A + + + SPN+ + LI G+ ++ L +
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 524 MLVQGVLPNAATFVAILSACSHAGLLN 550
M + V+P T I G+ N
Sbjct: 733 MEGKNVVPTRKTMQLIADGWKSIGVSN 759
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/433 (19%), Positives = 189/433 (43%), Gaps = 62/433 (14%)
Query: 51 GELAEARHMF----DEMPLRTVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISF 106
G EA +F +E ++ ++ T+++ ++ + L+L S + ++ +K + I F
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 107 SAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAE-----LVF 161
+A++++ + SG+L ++ + +SG + + L+ + + E+ ++
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 162 EELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPV----RDVVAWTTLISGYARREDGC 217
+E+ N ++++ + + + A ++ KM DVV + TL YAR C
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD--------- 268
+ M ++V PN +R C G +V+G C + ++
Sbjct: 513 TAEDMIIPRMLHNKVKPN-------VRTC--------GTIVNGYCEEGKMEEALRFFYRM 557
Query: 269 -----------FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMG 317
F++ I G L D D + + + E G + + ++L+ +G
Sbjct: 558 KELGVHPNLFVFNSLIKGFLN--INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 318 RIEEAELIFYGLRE--TNPI--SYNLMIKGYAMSSQIEKSKRLFEKMAP----KNLTSLN 369
++ E I+ + E +P +++++ KGYA + + EK++++ +M N+
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 370 TMISVYSKNGELDEAVKLFDKTKG----ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRR 425
+IS + GE+ +A++++ K G N T+ +++ G+ Q +A +L M
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEG 735
Query: 426 LSVDHSRSTFSVL 438
+V +R T ++
Sbjct: 736 KNVVPTRKTMQLI 748
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 23/332 (6%)
Query: 307 NSLIGGLILMGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKSKRLFEKMAP 362
N LI G G I+ A +F + N ++YN +I GY +I+ +L MA
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 363 K----NLTSLNTMISVYSKNGELDEAVKLFDKTKGER-----NSVTWNSMMSGYIHNGQH 413
K NL S N +I+ + G + E F T+ R + VT+N+++ GY G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVS--FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
+AL ++ M R + S T++ L + + + + N T L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 474 VDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
VD +S+ G++ +A R + FSP+V + ALING+ G ++I + M +G+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 530 LPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAE 589
P+ ++ +LS + +++ L + M + + P Y+ ++ R KEA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 590 EFINQM---PIEADGVIWGALLNASWFWKDIE 618
+ +M + D + AL+NA D+E
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 111/539 (20%), Positives = 232/539 (43%), Gaps = 51/539 (9%)
Query: 67 TVSSWNTMISGYSQWGRYDEALALASFMHRSCVKLNEISFSAVLSSCARSG-SLFLGKQV 125
T S ++ ++ YS+ D+AL++ +S++AVL + RS ++ + V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 126 HSLLLKSGFEKFGLVGSALLY-FCVRCCGIGEAELVFEELRDG----NHVLWSLMLSGYV 180
+L+S + L+ FC I A +F+++ N V ++ ++ GY
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCF-AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 181 QRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRRSEVLPNE 236
+ + + L M ++ +++++ +I+G R E + L RR L +E
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL-DE 310
Query: 237 FTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYES 296
T + +I+ + G H V+H ++ GL +L C ++ A +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 297 MGGEA-CLN--VANSLIGGLILMGRIEEAELIFYGLRETNP-------ISYNLMIKGYAM 346
M C N +L+ G G + EA + LRE N ++YN +I G+ +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEA---YRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 347 SSQIEKSKRLFEKMAPKNLT----SLNTMISVYSKNGELDEAVKLFDK--TKG-ERNSVT 399
+ ++E + + E M K L+ S +T++S + ++ ++DEA+++ + KG + +++T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 400 WNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLS 459
++S++ G+ + EA LY M R+ + T++ L A ++ LH +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 460 KTPFQANVYVGTALVDFYSKCGHLADAQRSFTSIF----SPNVAAW-------------- 501
+ +V + L++ +K +A+R +F P+ +
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 502 -TALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSM 559
+LI G+ G+ +E+ +F SML + P+ + ++ AG + ++ M
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 119/589 (20%), Positives = 249/589 (42%), Gaps = 83/589 (14%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMP----LRTVSSWNTMISGYSQWGRYDEALAL 90
P+V + NI I G + A +FD+M L V ++NT+I GY + + D+ L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
M ++ N IS++ V++ R G + K+V +L + + L
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRM---KEVSFVLTEMNRRGYSL----------- 308
Query: 151 CCGIGEAELVFEELRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKM----PVRDVVAWTTL 206
+ V ++ ++ GY + A+ + +M V+ +T+L
Sbjct: 309 -----------------DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 207 ISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDG 266
I + RA++ MR + PNE T ++ ++ G ++ V +G
Sbjct: 352 IHSMC-KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 267 LDFDNSIGGALAEFYCDRDAIDDAKRVYESM---GGEACLNVANSLIGGLILMGRIEEA- 322
AL +C ++DA V E M G + ++++ G ++EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 323 ----ELIFYGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKM----APKNLTSLNTMISV 374
E++ G++ + I+Y+ +I+G+ + +++ L+E+M P + + +I+
Sbjct: 471 RVKREMVEKGIK-PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 375 YSKNGELDEAVKLFDK--TKGE-RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHS 431
Y G+L++A++L ++ KG + VT++ +++G + EA +L + + S
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 432 RSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFT 491
T+ L C+++ F++ V +L+ + G + +A + F
Sbjct: 590 DVTYHTLIENCSNI----------------EFKSVV----SLIKGFCMKGMMTEADQVFE 629
Query: 492 SIF----SPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAG 547
S+ P+ A+ +I+G+ G ++ L++ M+ G L + T +A++ A G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 548 LLND-GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
+N+ I H ++ C E +V++ R G + + + +M
Sbjct: 690 KVNELNSVIVHVLRSCE--LSEAEQAKVLVEINHREGNMDVVLDVLAEM 736
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 492 SIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLND 551
S SPNV + LI G+ + G ++ LF M +G LPN T+ ++ ++D
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 552 GLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
G ++ SM + + P + Y V++ L R GR+KE + +M
Sbjct: 259 GFKLLRSMAL-KGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 233/541 (43%), Gaps = 39/541 (7%)
Query: 34 HPHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALA 89
+P V N+ I K + +A +FDEM R ++ ++NT+I GY + G +++
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 90 LASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCV 149
+ M ++ + I+F+ +L ++G + + V + GF S +L+
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS-ILFDGY 329
Query: 150 RCCGIGEAEL-VFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFG----KMPVRDV 200
EA L V+E D N S++L+ + + A ++ G K V +
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 201 VAWTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGAL-HAGKVVH 259
V + T+I GY R+ D + + M + + P+ +C+IR LG + +A K V+
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKI-EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 260 GLCIK---DGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILM 316
+ +K ++ N + G Y + D D + E G + +LI L
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKY-EFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 317 GRIEEAELIFYGL--RETNPIS--YNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSL 368
++ EA+++ + R +P YN++I G +IE + R ++M K NL +
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 369 NTMISVYSKNGELDEAVKLFDKT--KGERNSV-TWNSMMSGYIHNGQHSEALKLYVTMRR 425
NT+I S G+L EA L + KG + V T+NS++SGY G + LY M+R
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 426 LSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLAD 485
+ + T+ +L SLC+ + +L + + ++ V ++ Y+ G +
Sbjct: 628 SGIKPTLKTYHLLI----SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 486 A----QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILS 541
A ++ + + +LI G G E L M + + P A T+ I+
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 542 A 542
Sbjct: 744 G 744
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/426 (18%), Positives = 175/426 (41%), Gaps = 32/426 (7%)
Query: 219 RALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALA 278
+ L+LF M+ + P+ F + +I + ++ + + + L L
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 279 EFYCDRDAIDDAKRVYESMGG---EACLNVANSLIGGLILMGRIEEAELIFYGLRE---- 331
+ YC + + +V E M E L N+L+ GL G +E+AE + +++
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 332 TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPK----NLTSLNTMISVYSKNGELDEAVKL 387
+ +++++ GY+ + + E + ++E N + + +++ K G++++A ++
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 388 FDKTKGE---RNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTS 444
+ + N V +N+M+ GY G A M + + ++ L R
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR---R 433
Query: 445 LCSFQQGQLLHAHLSKTPFQA--------NVYVGTALVDF-YSKCGHLADAQRSFTSIFS 495
C + + ++K + N+ +G + + KC + ++
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM-- 491
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEI 555
PNV ++ LIN E+ ++ R M +GV P + ++ C G + D
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR- 550
Query: 556 FHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEF---INQMPIEADGVIWGALLNASW 612
F + + + Y ++D L +G+L EAE+ I++ ++ D + +L++
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 613 FWKDIE 618
F +++
Sbjct: 611 FAGNVQ 616
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 138/656 (21%), Positives = 252/656 (38%), Gaps = 101/656 (15%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALAL 90
P + N+ I + + AR +FDEMP + ++ ++ GY + G D+ L L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
+ M V N++ ++ ++SS R G +++ + + G + ++ + +
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 151 CCGIGEAELVFEE--------LRDGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVVA 202
+ +A +F + L N + ++LML G+ + ++ +A LF + D +A
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 203 ----WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVV 258
+ + G R E A + + M + P+ ++ + ++ +LG L K +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIE-AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 259 HGLCIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVA---NSLIGGLIL 315
GL ++G+ D G L YC +D AK + + M CL A N L+ L
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 316 MGRIEEAELIFYGLRET----NPISYNLMIKGYAMSSQIEKS------------------ 353
MGRI EAE + + E + ++ N+++ G S +++K+
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 354 ---------KRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER---NSVTWN 401
L E +L + +T+++ K G EA LF + GE+ +SV +N
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 402 SMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKT 461
+ + G+ S A ++ M + S T++ L + L + +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 462 PFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGY--------- 508
N+ + + + + DA + +PNV ++ LI +
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 509 ------------AYHGLGSESILLFRSMLVQGVLPNAATFV-AILSACSHAGLL------ 549
GL S L+F +L G L A + A+L G
Sbjct: 684 QEVFETAVSICGQKEGLYS---LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLV 740
Query: 550 -----NDGLE----IFHSM-QICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM 595
D LE I H M Y P V+D LG+ G KEA F ++M
Sbjct: 741 ESLCKKDELEVASGILHKMIDRGYGFDPAA--LMPVIDGLGKMGNKKEANSFADKM 794
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 169/418 (40%), Gaps = 42/418 (10%)
Query: 218 ERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGAL 277
+ A +LF M PNEFT ++R + G G + G+ + I +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 278 AEFYCDRDAIDDAKRVYESMGGEACLN---VANSLIGGLILMGRIEEAELIF-------- 326
+C DD++++ E M E + NS I L G++ +A IF
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 327 YGLRETNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKN----LTSLNTMISVYSKNGELD 382
GL N I+YNLM+KG+ +E +K LFE + + L S N + ++G+
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 383 EAVKLFDK--TKGERNSV-TWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLF 439
EA + + KG S+ ++N +M G G S+A + M+R V T+ L
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 440 RACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI----FS 495
S+ + L + + N Y L+ K G +++A+ + +
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 496 PNVAAWTALINGYAYHGLGSESILLFRSMLVQG--VLPNAATFVAILSACSHAGLLNDGL 553
+ +++G G ++I + + M V G L N S+ GL++D L
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN--------SYIGLVDDSL 515
Query: 554 EIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQM---PIEADGVIWGALL 608
I P + Y+ +++ L ++GR EA+ +M ++ D V + +
Sbjct: 516 -------IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 346 MSSQIEKSKRLFEKMAPKNLTSLNTMISVYSKNGELDEAVKLFD--KTKGERNSVT---W 400
+SS I+K+K L+SL +++S+++K+ +D+A F +++ N + +
Sbjct: 66 LSSSIQKTK----------LSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLY 115
Query: 401 NSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRSTFSVLFRA-CTSLCSFQQGQLLHAHLS 459
N ++ I + LY M + TF++L RA C S C + L +
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSC-VDAARELFDEMP 174
Query: 460 KTPFQANVYVGTALVDFYSKCG------HLADAQRSFTSIFSPNVAAWTALINGYAYHGL 513
+ + N + LV Y K G L +A SF + PN + +++ + G
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL--PNKVIYNTIVSSFCREGR 232
Query: 514 GSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQI 561
+S + M +G++P+ TF + +SA G + D IF M++
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 185/443 (41%), Gaps = 23/443 (5%)
Query: 209 GYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD 268
G+ ++ D RA D F + + + + + +I + + G + + + +DG
Sbjct: 146 GFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFS 205
Query: 269 FDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEAELIFYG 328
D +L + + +A V++ M + C + L + G++
Sbjct: 206 LDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS 265
Query: 329 LRE--------TNPISYNLMIKGYAMSSQIEKSKRLFEKMAPKNLT----SLNTMISVYS 376
L E + +YN +I S +++ ++FE+M + + N ++ VY
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 377 KNGELDEAVKLFDKT--KGERNS-VTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDHSRS 433
K+ EA+K+ ++ G S VT+NS++S Y +G EA++L M
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 434 TFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVDFYSKCGHLADAQRSFTSI 493
T++ L + + + + N+ A + Y G + + F I
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 494 ----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLL 549
SP++ W L+ + +G+ SE +F+ M G +P TF ++SA S G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 550 NDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP---IEADGVIWGA 606
+ ++ M + VTP + Y V+ L R G +++E+ + +M + + + + +
Sbjct: 506 EQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 607 LLNASWFWKDIEVGERAAEKLFS 629
LL+A K+I + AE+++S
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYS 587
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 243/613 (39%), Gaps = 124/613 (20%)
Query: 42 ISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALALASFMHRS 97
I I+ K G ++ A +MF+ + V S+ ++IS ++ GRY EA+ + M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 98 CVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLY-FCVRCCGIG- 155
K I+++ +L+ + G+ + ++ SL+ K + G+ A Y + CC G
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPW--NKITSLVEK--MKSDGIAPDAYTYNTLITCCKRGS 293
Query: 156 ---EAELVFEELRDGNH---------------------------------------VLWS 173
EA VFEE++ V ++
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 174 LMLSGYVQRDMMGNAMDLFGKMPVR----DVVAWTTLISGYARREDGCERALDLFRCMRR 229
++S Y + M+ AM+L +M + DV +TTL+SG+ R E A+ +F MR
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF-ERAGKVESAMSIFEEMRN 412
Query: 230 SEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLD--------------------- 268
+ PN T + I++ + GK + I D ++
Sbjct: 413 AGCKPNICTFNAFIKMYG-----NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 269 -FDNSIGGALAE-----FYCDRD-------------AIDDAKRVYESM---GGEACLNVA 306
D+ + G E F +R+ + + A VY M G L+
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 307 NSLIGGLILMGRIEEAELIFYGLRE----TNPISYNLMIKGYAMSSQIEKSKRLFEK--- 359
N+++ L G E++E + + + N ++Y ++ YA +I L E+
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 360 --MAPKNLTSLNTMISVYSKNGELDEAVKLFDKTKGER----NSVTWNSMMSGYIHNGQH 413
+ P+ + L T++ V SK L EA + F + K ER + T NSM+S Y
Sbjct: 588 GVIEPRAVL-LKTLVLVCSKCDLLPEAERAFSELK-ERGFSPDITTLNSMVSIYGRRQMV 645
Query: 414 SEALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTAL 473
++A + M+ S +T++ L + F + + + + + ++ +
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 474 VDFYSKCGHLADAQRSFTSI----FSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGV 529
+ Y + + DA R F+ + P+V + I YA + E+I + R M+ G
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 530 LPNAATFVAILSA 542
PN T+ +I+
Sbjct: 766 RPNQNTYNSIVDG 778
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 181/448 (40%), Gaps = 63/448 (14%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPLR----TVSSWNTMISGYSQWGRYDEALAL 90
P +++ N I+ A+ G L EA + ++M + V ++ T++SG+ + G+ + A+++
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
M + K N +F+A + G ++ + G + + LL +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 151 CCGIGEAELVFEELRDGNHV----LWSLMLSGYVQRDMMGNAMDLFGKM----PVRDVVA 202
E VF+E++ V ++ ++S Y + AM ++ +M D+
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 203 WTTLISGYAR-------------REDGCERALDLFRC---------------------MR 228
+ T+++ AR EDG + +L C +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 229 RSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGALAEFYCDRDAID 288
+ P L ++ +C++ L + + G D + ++ Y R +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 289 DAKRVYESM---GGEACLNVANSLI---GGLILMGRIEE--AELIFYGLRETNPISYNLM 340
A V + M G + NSL+ G+ EE E++ G++ + ISYN +
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK-PDIISYNTV 705
Query: 341 IKGYAMSSQIEKSKRLFEKMAP----KNLTSLNTMISVYSKNGELDEA---VKLFDKTKG 393
I Y ++++ + R+F +M ++ + NT I Y+ + +EA V+ K
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 394 ERNSVTWNSMMSGYIHNGQHSEALKLYV 421
N T+NS++ GY + EA KL+V
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEA-KLFV 792
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 136/320 (42%), Gaps = 26/320 (8%)
Query: 35 PHVISTNISIAHRAKTGELAEA----RHMFDEMPLRTVSSWNTMISGYSQWGRYDEALAL 90
P + N I+ ++ G +A R M D +S++NT+++ ++ G ++++ +
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
+ M K NE+++ ++L + A + L + + E ++ L+ C +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 151 CCGIGEAELVFEELRD----GNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVR----DVVA 202
C + EAE F EL++ + + M+S Y +R M+ A + M R +
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVI-RICARLGALHAGKVVHGL 261
+ +L+ ++R D ++ ++ R + + P+ + + VI C A ++ +
Sbjct: 667 YNSLMYMHSRSAD-FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 262 ----CIKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEAC---LNVANSLIGGLI 314
+ D + ++ IG Y ++A V M C N NS++ G
Sbjct: 726 RNSGIVPDVITYNTFIGS-----YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 315 LMGRIEEAELIFYGLRETNP 334
+ R +EA+L LR +P
Sbjct: 781 KLNRKDEAKLFVEDLRNLDP 800
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:22598038-22601688 FORWARD LENGTH=1136
Length = 1136
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 137/626 (21%), Positives = 252/626 (40%), Gaps = 75/626 (11%)
Query: 35 PHVISTNISIAHRAKTGELAEARHMFDEMPL----RTVSSWNTMISGYSQWGRYDEALAL 90
P+ I + I + + G L EA +++ M L R ++N +++ + G+ EA
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 91 ASFMHRSCVKLNEISFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVR 150
M + N +SF +++ SG V + K G +LL +
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 151 CCGIGEAELVFEELRDG----NHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDVV----A 202
+ EAE + L + V+++ +L+ + + A+ LFG+M R ++
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 203 WTTLISGYARREDGCERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLC 262
+T+LISG R+ L R VLPN+ C + G AG+ G+
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD-----GMFKAGQWKAGIY 745
Query: 263 IKDGLDFDNSIGGALAEFYCDRDAIDDAKRVYESMGGEACLNVANSLIGGLILMGRIEEA 322
++ +D ++G + N++I G MG+IE+
Sbjct: 746 FREQMD---------------------------NLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 323 ELIFYGLRETNP----ISYNLMIKGYAMSSQIEKSKRLFEKMA-----PKNLTSLNTMIS 373
+ + N +YN+++ GY+ + S L+ + P LT + ++
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 374 VYSKNGELDEAVKLFDK--TKG-ERNSVTWNSMMSGYIHNGQHSEALKLYVTMRRLSVDH 430
+ N L+ +K+ +G E + T+N ++S NG+ + A L M L +
Sbjct: 839 ICESN-MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
Query: 431 SRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPF--QANVYVGTALVDFYSKCGHLADA-- 486
+ T + FQ+ +++ +SK ++ Y+G L++ + G + A
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG--LINGLCRVGDIKTAFV 955
Query: 487 ---QRSFTSIFSPNVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSAC 543
+ I PNVA +A++ A G E+ LL R ML ++P A+F ++ C
Sbjct: 956 VKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 1014
Query: 544 SHAGLLNDGLEIFHSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMPIEADGVI 603
G + + LE+ M C + + Y ++ L G + A E +M + DG
Sbjct: 1015 CKNGNVIEALELRVVMSNC-GLKLDLVSYNVLITGLCAKGDMALAFELYEEM--KGDGF- 1070
Query: 604 WGALLNASWFWKDIEVGERAAEKLFS 629
L NA+ +K + G A E FS
Sbjct: 1071 ---LANATT-YKALIRGLLARETAFS 1092
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 128/651 (19%), Positives = 252/651 (38%), Gaps = 85/651 (13%)
Query: 4 FLRFCPVRNCCKRVEKFRLFTTLL---------------RDSEPHHPHVISTNISIAHRA 48
FL+ R C V F + +L + + P +++ N +
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 49 KTGELAEARHMFDEMPLRTVS----SWNTMISGYSQWGRYDEALALASFMHRSCVKLNEI 104
K G A + D M + V ++N +I + R + L M + + NE+
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 105 SFSAVLSSCARSGSLFLGKQVHSLLLKSGFEKFGLVGSALLYFCVRCCGIGEAELVFEEL 164
+++ +++ + G + + Q+ + +L G + +AL+ + EA +F +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 165 R----DGNHVLWSLMLSGYVQRDMMGNAMDLFGKMPVRDV----VAWTTLISGYARREDG 216
+ V + ++L G + A + +M V + +T +I G +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK-NGF 458
Query: 217 CERALDLFRCMRRSEVLPNEFTLDCVIRICARLGALHAGKVVHGLCIKDGLDFDNSIGGA 276
+ A+ L M + + P+ T +I ++G K + + GL + I
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 277 LAEFYCDRDAIDDAKRVYESMGGEACLN---VANSLIGGLILMGRIEEAELIFYGLRE-- 331
L C + +A R+YE+M E N L+ L G++ EAE +
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 332 --TNPISYNLMIKGYAMSSQIEKSKRLFEKM---------------------------AP 362
N +S++ +I GY S + K+ +F++M A
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 363 KNLTSL------------NTMISVYSKNGELDEAVKLFDKTKGER---NSVTWNSMMSGY 407
K L SL NT+++ K+G L +AV LF + +S T+ S++SG
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 408 IHNGQHSEALKLYVTMR-RLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQAN 466
G+ A+ R +V ++ ++ ++ G + +
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 467 VYVGTALVDFYSKCGHLADAQRSFTSIFS----PNVAAWTALINGYAYHGLGSESILLFR 522
+ A++D YS+ G + + + PN+ + L++GY+ S S LL+R
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 523 SMLVQGVLPNAATFVAILSACSHAGLLNDGLEIFHSMQICYRVTPTIEHYT 573
S+++ G+LP+ T +++ + +L GL+I + IC V ++ YT
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-ICRGV--EVDRYT 866
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 153/402 (38%), Gaps = 57/402 (14%)
Query: 359 KMAPKNLTSLNTMISVYSKNGELDEAVKLFD--KTKGERNSV-TWNSMMSGYIHNGQHSE 415
++ N + + +I VY + G + +++++F G SV T N+++ + +G+
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 416 ALKLYVTMRRLSVDHSRSTFSVLFRACTSLCSFQQGQLLHAHLSKTPFQANVYVGTALVD 475
M + + +TF++L + SF++ L + K+ + + ++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 476 FYSKCG------HLADAQRS---------------------------------FTSIFSP 496
+Y K G L D +S + P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 497 NVAAWTALINGYAYHGLGSESILLFRSMLVQGVLPNAATFVAILSACSHAGLLNDGLEIF 556
N + LING++ G + L ML G+ PN TF A++ G + L++F
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 557 HSMQICYRVTPTIEHYTCVVDLLGRSGRLKEAEEFINQMP--------IEADGVIWGALL 608
+ M+ +TP+ Y ++D L ++ A F +M I G+I G
Sbjct: 397 YMME-AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 609 NASWFWKDIEVGERAAEKLFSLDPNPISGFVILSNMYAILGRWGQKTTIRKRLQSLELRK 668
N + + E + + +DP+ ++ + L N + +GR+ I R+ + L
Sbjct: 456 NGFLDEAVVLLNEMSKD---GIDPDIVT-YSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 669 DPGCSWIELNNNIHMFSVEDKTHAYSDVIYA--TVDHLTATI 708
+ + N M +++ Y +I T DH T +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553