Miyakogusa Predicted Gene
- Lj4g3v0513460.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0513460.2 Non Chatacterized Hit- tr|I3SIF6|I3SIF6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.2,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; FAMILY
NOT NAMED,NULL; HLH,Helix-l,CUFF.47555.2
(504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65078 similar to UniRef100_Q9SWV1 Cluster: ER33 prote... 999 0.0
gnl|LJGI|TC82304 similar to UniRef100_Q8LAF0 Cluster: ER33 prote... 496 e-140
gnl|LJGI|BW598989 similar to UniRef100_Q8LAF0 Cluster: ER33 prot... 466 e-131
gnl|LJGI|TC78393 335 2e-91
gnl|LJGI|BW600273 56 2e-07
>gnl|LJGI|TC65078 similar to UniRef100_Q9SWV1 Cluster: ER33 protein; n=1; Solanum
lycopersicum|Rep: ER33 protein - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (80%)
Length = 970
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus
Query: 1 atgatagctagctccttctgcaatgctgattcagtgttttcaagagaagaggggatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atgatagctagctccttctgcaatgctgattcagtgttttcaagagaagaggggatagat 238
Query: 61 gttagaaaaatgatcggacataaaaggagtccatgctctgttgatcagagcagttatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gttagaaaaatgatcggacataaaaggagtccatgctctgttgatcagagcagttatacc 298
Query: 121 tctattgcatctaaaaagcaaaaggctgatttatctatgagttctaaggataggaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tctattgcatctaaaaagcaaaaggctgatttatctatgagttctaaggataggaaggaa 358
Query: 181 aaggttggagaacgaattgttgctcttcagcagctcgtttccccatatggaaagacagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaggttggagaacgaattgttgctcttcagcagctcgtttccccatatggaaagacagat 418
Query: 241 acatcttctgttcttaatgaggcgatggaatacataggattccttcataaacaagttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 acatcttctgttcttaatgaggcgatggaatacataggattccttcataaacaagttaag 478
Query: 301 ctgctcagtgctccttacctggagagttcaccagcaaccatgatggagggcatagagcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctgctcagtgctccttacctggagagttcaccagcaaccatgatggagggcatagagcca 538
Query: 361 tgcagcctgaggaatagaggattatgtcttgttccagtctcaattactatgggagttgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgcagcctgaggaatagaggattatgtcttgttccagtctcaattactatgggagttgct 598
Query: 421 gagagcaatggtgcagatatctgggctccaatcaagaccacttcaccaaaatctgagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gagagcaatggtgcagatatctgggctccaatcaagaccacttcaccaaaatctgagaag 658
Query: 481 gatattgtctcacaatttcattga 504
||||||||||||||||||||||||
Sbjct: 659 gatattgtctcacaatttcattga 682
>gnl|LJGI|TC82304 similar to UniRef100_Q8LAF0 Cluster: ER33 protein; n=1; Arabidopsis
thaliana|Rep: ER33 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 718
Score = 496 bits (250), Expect = e-140
Identities = 267/273 (97%), Gaps = 6/273 (2%)
Strand = Plus / Plus
Query: 232 aagacagatacatcttctgttcttaatgaggcgatggaatacataggattccttcataaa 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aagacagatacatcttctgttcttaatgaggcgatggaatacataggattccttcataaa 401
Query: 292 caagttaagctgctcagtgctccttacctggagagttcaccagcaaccatgatggagggc 351
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 caa------ctgctcagtgctccttacctggagagttcaccagcaaccatgatggagggc 455
Query: 352 atagagccatgcagcctgaggaatagaggattatgtcttgttccagtctcaattactatg 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atagagccatgcagcctgaggaatagaggattatgtcttgttccagtctcaattactatg 515
Query: 412 ggagttgctgagagcaatggtgcagatatctgggctccaatcaagaccacttcaccaaaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggagttgctgagagcaatggtgcagatatctgggctccaatcaagaccacttcaccaaaa 575
Query: 472 tctgagaaggatattgtctcacaatttcattga 504
|||||||||||||||||||||||||||||||||
Sbjct: 576 tctgagaaggatattgtctcacaatttcattga 608
Score = 333 bits (168), Expect = 6e-91
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 atgatagctagctccttctgcaatgctgattcagtgttttcaagagaagaggggatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atgatagctagctccttctgcaatgctgattcagtgttttcaagagaagaggggatagat 236
Query: 61 gttagaaaaatgatcggacataaaaggagtccatgctctgttgatcagagcagttatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gttagaaaaatgatcggacataaaaggagtccatgctctgttgatcagagcagttatacc 296
Query: 121 tctattgcatctaaaaagcaaaaggctgatttatctatgagttctaag 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tctattgcatctaaaaagcaaaaggctgatttatctatgagttctaag 344
>gnl|LJGI|BW598989 similar to UniRef100_Q8LAF0 Cluster: ER33 protein; n=1; Arabidopsis
thaliana|Rep: ER33 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (44%)
Length = 465
Score = 466 bits (235), Expect = e-131
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 169 gataggaaggaaaaggttggagaacgaattgttgctcttcagcagctcgtttccccatat 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gataggaaggaaaaggttggagaacgaattgttgctcttcagcagctcgtttccccatat 290
Query: 229 ggaaagacagatacatcttctgttcttaatgaggcgatggaatacataggattccttcat 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggaaagacagatacatcttctgttcttaatgaggcgatggaatacataggattccttcat 350
Query: 289 aaacaagttaagctgctcagtgctccttacctggagagttcaccagcaaccatgatggag 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaacaagttaagctgctcagtgctccttacctggagagttcaccagcaaccatgatggag 410
Query: 349 ggcatagagccatgcagcctgaggaatagaggattatgtcttgttccagtctcaa 403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggcatagagccatgcagcctgaggaatagaggattatgtcttgttccagtctcaa 465
Score = 83.8 bits (42), Expect = 1e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 atgatagctagctccttctgcaatgctgattcagtgttttca 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atgatagctagctccttctgcaatgctgattcagtgttttca 230
>gnl|LJGI|TC78393
Length = 504
Score = 335 bits (169), Expect = 2e-91
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 atgatagctagctccttctgcaatgctgattcagtgttttcaagagaagaggggatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atgatagctagctccttctgcaatgctgattcagtgttttcaagagaagaggggatagat 287
Query: 61 gttagaaaaatgatcggacataaaaggagtccatgctctgttgatcagagcagttatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gttagaaaaatgatcggacataaaaggagtccatgctctgttgatcagagcagttatacc 347
Query: 121 tctattgcatctaaaaagcaaaaggctgatttatctatgagttctaagg 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tctattgcatctaaaaagcaaaaggctgatttatctatgagttctaagg 396
>gnl|LJGI|BW600273
Length = 348
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 429 tggtgcagatatctgg-gctccaatcaagaccacttcacc 467
||||||| |||||||| |||||||||||||||||||||||
Sbjct: 180 tggtgcaaatatctggagctccaatcaagaccacttcacc 219