Miyakogusa Predicted Gene

Lj4g3v0506970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0506970.1 Non Chatacterized Hit- tr|C1EDS6|C1EDS6_MICSR
Putative uncharacterized protein OS=Micromonas sp.
(st,33.33,8e-17,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Protein of
unknown function DUF1301, TMEM70; seg,NULL; DUF,CUFF.47526.1
         (251 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g23520.1                                                       358   2e-99

>Glyma17g23520.1 
          Length = 241

 Score =  358 bits (920), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 178/251 (70%), Positives = 196/251 (78%), Gaps = 10/251 (3%)

Query: 1   MARAALLHLLRSQNKHLVSTRTPSAYNCFRSSTCGRPVSTNPTFKTTINTNPTSKTSSQL 60
           MARA LLHLLRSQ+   VS   PSAY CF SSTC RP+S NP+FKT          SS L
Sbjct: 1   MARATLLHLLRSQSLRHVSKNAPSAYRCFGSSTCQRPISPNPSFKT----------SSHL 50

Query: 61  AVAQIRWASQATTREEDNKISIGPAGGGQSGEDDKETGVVYNGPISSTIXXXXXXXXXXX 120
           A+ Q RWASQ  T EED+KISIGP  GGQ GE DKETGVVY GPIS+TI           
Sbjct: 51  AIFQRRWASQIPTTEEDDKISIGPRSGGQPGEGDKETGVVYYGPISNTIKKVKLLSLSTC 110

Query: 121 XXXXXXGPVITFMTSPDMNVILKGAVASTVIFLSASTTGALHWFVSPYIHKLRWLPGSDT 180
                 GPVITFMTSPDMNVILKGAVAS+VIFLSA+TT ALHWFVSPY+HKLRW PGSD+
Sbjct: 111 CLSVSLGPVITFMTSPDMNVILKGAVASSVIFLSATTTAALHWFVSPYVHKLRWQPGSDS 170

Query: 181 FEVEMLSWLATPIPKTLKFSDIRPAETNRPFVTFKADGSFYFVDTEHCHNKALLARLTPQ 240
           FEVEMLSWLAT IPKT+KFSDIRP +TNRPFVTFKA+G+FYFVD EHCHNKALLARLTP+
Sbjct: 171 FEVEMLSWLATYIPKTIKFSDIRPPQTNRPFVTFKANGNFYFVDAEHCHNKALLARLTPK 230

Query: 241 KVTHESAFKNL 251
           +V++ES FKNL
Sbjct: 231 EVSNESPFKNL 241