Miyakogusa Predicted Gene
- Lj4g3v0506970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0506970.1 Non Chatacterized Hit- tr|C1EDS6|C1EDS6_MICSR
Putative uncharacterized protein OS=Micromonas sp.
(st,33.33,8e-17,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Protein of
unknown function DUF1301, TMEM70; seg,NULL; DUF,CUFF.47526.1
(756 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64710 similar to UniRef100_A7PI83 Cluster: Chromosome... 1499 0.0
gnl|LJGI|DC595422 262 3e-69
gnl|LJGI|AV770525 similar to UniRef100_A7PI83 Cluster: Chromosom... 214 6e-55
>gnl|LJGI|TC64710 similar to UniRef100_A7PI83 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1062
Score = 1499 bits (756), Expect = 0.0
Identities = 756/756 (100%)
Strand = Plus / Plus
Query: 1 atggcgagagcggctctccttcaccttctgcgctcacaaaacaagcacctcgtttccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atggcgagagcggctctccttcaccttctgcgctcacaaaacaagcacctcgtttccaca 83
Query: 61 agaactccctcagcgtataattgttttaggtcctcaacttgtggacggccagtaagtaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 agaactccctcagcgtataattgttttaggtcctcaacttgtggacggccagtaagtaca 143
Query: 121 aatccaacattcaaaacaacgattaatactaatccgacatccaaaacttcctcccaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aatccaacattcaaaacaacgattaatactaatccgacatccaaaacttcctcccaactt 203
Query: 181 gctgttgcccaaataagatgggcatctcaagccacaactagagaggaagacaacaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gctgttgcccaaataagatgggcatctcaagccacaactagagaggaagacaacaaaatt 263
Query: 241 agcattggacctgctggtggaggacaatctggggaagatgacaaggaaaccggagttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcattggacctgctggtggaggacaatctggggaagatgacaaggaaaccggagttgtt 323
Query: 301 tataacggtccgatctcatccactataaagaaagtaaaacttctgtcgctctcgacttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tataacggtccgatctcatccactataaagaaagtaaaacttctgtcgctctcgacttgc 383
Query: 361 tgcctctctgtatctctgggtccagtcataacattcatgacatcccctgacatgaatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcctctctgtatctctgggtccagtcataacattcatgacatcccctgacatgaatgtc 443
Query: 421 atcctgaagggtgcagtagcatcaactgtgatattcttgagtgcttcaacgaccggcgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcctgaagggtgcagtagcatcaactgtgatattcttgagtgcttcaacgaccggcgct 503
Query: 481 cttcactggttcgttagcccgtacatccacaaactccggtggctgccgggttcggacacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttcactggttcgttagcccgtacatccacaaactccggtggctgccgggttcggacacc 563
Query: 541 ttcgaggtggagatgttgtcttggcttgcaacacccattccaaagactctaaagttttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcgaggtggagatgttgtcttggcttgcaacacccattccaaagactctaaagttttct 623
Query: 601 gatattcgaccagcggaaaccaataggccttttgtgacttttaaggctgatgggagtttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gatattcgaccagcggaaaccaataggccttttgtgacttttaaggctgatgggagtttt 683
Query: 661 tattttgtggatacagagcactgtcacaataaggcacttctggccagactcaccccacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tattttgtggatacagagcactgtcacaataaggcacttctggccagactcaccccacaa 743
Query: 721 aaagttactcatgagtcagctttcaagaacttgtga 756
||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaagttactcatgagtcagctttcaagaacttgtga 779
>gnl|LJGI|DC595422
Length = 219
Score = 262 bits (132), Expect = 3e-69
Identities = 195/215 (90%), Gaps = 2/215 (0%)
Strand = Plus / Plus
Query: 8 gagcggctctccttcaccttctgcgctcacaaaacaagcacctcg-tttccacaagaact 66
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gagcggctctccttcaccttctgcgctcacaaaacaagcacctcgctttccacaagaact 60
Query: 67 ccctcagcgtataattgttttaggtcctcaacttgtggacggccagtaagtacaaatcca 126
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 61 ccctcagcgtataattgttttaggtcctcgagttgtggacggccagtaagtacaaatcca 120
Query: 127 acattcaaaacaacgattaatactaatccg-acatccaaaacttcctcccaacttgctgt 185
|||||||||||||| |||| | | | | |||||||||| ||||||||||||| || |
Sbjct: 121 acattcaaaacaacaattagtgggtagcngcacatccaaaaattcctcccaacttnctat 180
Query: 186 tgcccaaataagatgggcatctcaagccacaacta 220
| ||||||||| || | |||||||| |||||||||
Sbjct: 181 tacccaaataaaatngncatctcaanccacaacta 215
>gnl|LJGI|AV770525 similar to UniRef100_A7PI83 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 416
Score = 214 bits (108), Expect = 6e-55
Identities = 132/140 (94%)
Strand = Plus / Minus
Query: 617 aaaccaataggccttttgtgacttttaaggctgatgggagtttttattttgtggatacag 676
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 416 aaaccaataggcctttcgtgacttttaaggctgatgggagtttgtattttgtggatacag 357
Query: 677 agcactgtcacaataaggcacttctggccagactcaccccacaaaaagttactcatgagt 736
||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 356 agcactgtcccaatcaggcacttctggccagactcaccccaccccaacttactcatgagt 297
Query: 737 cagctttcaagaacttgtga 756
||||||||||||||||||||
Sbjct: 296 cagctttcaagaacttgtga 277