Miyakogusa Predicted Gene
- Lj4g3v0385780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0385780.2 tr|G7JV76|G7JV76_MEDTR Myocyte-specific enhancer
factor 2B OS=Medicago truncatula GN=MTR_4g093970
PE,72.77,0,coiled-coil,NULL; MADS_BOX_2,Transcription factor,
MADS-box; K_BOX,Transcription factor, K-box; no d,CUFF.47024.2
(627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81268 similar to UniRef100_Q6RF31 Cluster: MADS box t... 1168 0.0
gnl|LJGI|GO031822 weakly similar to UniRef100_Q9AT62 Cluster: MA... 829 0.0
gnl|LJGI|TC62447 similar to UniRef100_Q9M725 Cluster: MADS-box t... 66 3e-10
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p... 56 3e-07
>gnl|LJGI|TC81268 similar to UniRef100_Q6RF31 Cluster: MADS box transcription factor;
n=1; Populus tomentosa|Rep: MADS box transcription
factor - Populus tomentosa (Chinese white poplar),
partial (46%)
Length = 773
Score = 1168 bits (589), Expect = 0.0
Identities = 618/629 (98%), Gaps = 9/629 (1%)
Strand = Plus / Plus
Query: 1 atgactagaaagaggatacagataaagaaaatagacaacataagttcgaggcaagtgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgactagaaagaggatacagataaagaaaatagacaacataagttcgaggcaagtgaca 169
Query: 61 ttctcaaagaggagaaaagggcttttcaagaaagctcaggagctctcaactctttgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttctcaaagaggagaaaagggcttttcaagaaagctcaggagctctcaactctttgtgat 229
Query: 121 gcagacatagctctcatagtcttttctgcaactaacaagctctttgagtatgctagttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gcagacatagctctcatagtcttttctgcaactaacaagctctttgagtatgctagttca 289
Query: 181 agcattcaaaaagtaattgaaaggcgtagtcagtgttcagggattcacagattggagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agcattcaaaaagtaattgaaaggcgtagtcagtgttcagggattcacagattggagcac 349
Query: 241 ctacctattgagcag---------tttgagagtgactccaatgacacactgcgcaagaaa 291
||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 350 ctacctattgagcagtttatgcagtttgagagtgactccaatgacacaccgcgcaagaaa 409
Query: 292 gtagaagaaaagacacatgaactgaggcagttgaacggggaagatctgcaaggattgaca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtagaagaaaagacacatgaactgaggcagttgaacggggaagatctgcaaggattgaca 469
Query: 352 ttacatcagcttcagaaactagaggaagtacttaaaagaagtttagccagtgtttccaga 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttacatcagcttcagaaactagaggaagtacttaaaagaagtttagccagtgtttccaga 529
Query: 412 gtgaaggatgaaaaatttatgcaagaaatcagcacccttaagagaaaggaagtggaactg 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gtgaaggatgaaaaatttatgcaagaaatcagcacccttaagagaaaggaagtggaactg 589
Query: 472 attgaagaaaaccaaaaattgaaacaggtaccaagccttacacagtatggacaaaggcaa 531
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 590 attgaagaaaaccaaaaattgaaacaggtaccaggccttacacagtatggacaaaggcaa 649
Query: 532 tcattagagtccactattagctcttcatcttatcttcttgaagaagatggtagtgacacg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tcattagagtccactattagctcttcatcttatcttcttgaagaagatggtagtgacacg 709
Query: 592 tctctcaagttggggttgcctttattaca 620
|||||||||||||||||||||||||||||
Sbjct: 710 tctctcaagttggggttgcctttattaca 738
>gnl|LJGI|GO031822 weakly similar to UniRef100_Q9AT62 Cluster: MADS box transcription
factor; n=1; Ipomoea batatas|Rep: MADS box transcription
factor - Ipomoea batatas (Sweet potato) (Batate),
partial (41%)
Length = 520
Score = 829 bits (418), Expect = 0.0
Identities = 424/426 (99%)
Strand = Plus / Plus
Query: 1 atgactagaaagaggatacagataaagaaaatagacaacataagttcgaggcaagtgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgactagaaagaggatacagataaagaaaatagacaacataagttcgaggcaagtgaca 154
Query: 61 ttctcaaagaggagaaaagggcttttcaagaaagctcaggagctctcaactctttgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttctcaaagaggagaaaagggcttttcaagaaagctcaggagctctcaactctttgtgat 214
Query: 121 gcagacatagctctcatagtcttttctgcaactaacaagctctttgagtatgctagttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gcagacatagctctcatagtcttttctgcaactaacaagctctttgagtatgctagttca 274
Query: 181 agcattcaaaaagtaattgaaaggcgtagtcagtgttcagggattcacagattggagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 275 agcattcaaaaagtaattgaaaggcgtagtcagtgttcagggattcacagattagagcac 334
Query: 241 ctacctattgagcagtttgagagtgactccaatgacacactgcgcaagaaagtagaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctacctattgagcagtttgagagtgactccaatgacacactgcgcaagaaagtagaagaa 394
Query: 301 aagacacatgaactgaggcagttgaacggggaagatctgcaaggattgacattacatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aagacacatgaactgaggcagttgaacggggaagatctgcaaggattgacattacatcag 454
Query: 361 cttcagaaactagaggaagtacttaaaagaagtttagccagtgtttccagagtgaaggat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 455 cttcagaaactagaggaagtacttaaaagaagtttagccagtgtttccagagtgaaagat 514
Query: 421 gaaaaa 426
||||||
Sbjct: 515 gaaaaa 520
>gnl|LJGI|TC62447 similar to UniRef100_Q9M725 Cluster: MADS-box transcription factor;
n=1; Canavalia lineata|Rep: MADS-box transcription
factor - Canavalia lineata, partial (72%)
Length = 820
Score = 65.9 bits (33), Expect = 3e-10
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 10 aagaggatacagataaagaaaatagacaacataagttcgaggcaagtgacattctcaaag 69
|||| |||| ||||||||||||| |||||||||| | ||||||||||| || || |||
Sbjct: 104 aagaagataaagataaagaaaattgacaacataacggcaaggcaagtgacgttttctaag 163
Query: 70 aggagaaaagggcttttcaagaaagctcaggagctctcaactctttgtgatgc 122
||||| |||| | |||||||||||||| ||||| ||| ||| ||||||||
Sbjct: 164 aggaggcgagggatcttcaagaaagctcaagagctttcagttctgtgtgatgc 216
>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
(Garden pea), complete
Length = 1276
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 49 aggcaagtgacattctcaaagaggagaaaagggcttttcaagaaagct 96
|||||||| ||||| ||||||||||||| |||||| |||||||||||
Sbjct: 358 aggcaagttacatttgcaaagaggagaaatgggcttctcaagaaagct 405