Miyakogusa Predicted Gene
- Lj4g3v0336250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0336250.1 tr|G7IL77|G7IL77_MEDTR Auxin-induced protein 5NG4
OS=Medicago truncatula GN=MTR_2g007960 PE=4 SV=1,60.37,0,seg,NULL;
FAMILY NOT NAMED,NULL; EamA,Drug/metabolite transporter; Multidrug
resistance efflux trans,CUFF.46880.1
(1311 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60153 weakly similar to UniRef100_A2Q3V4 Cluster: Int... 86 6e-16
gnl|LJGI|TC61995 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 82 1e-14
gnl|LJGI|TC60577 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 64 2e-09
gnl|LJGI|TC82671 weakly similar to UniRef100_A7QBD0 Cluster: Chr... 56 6e-07
gnl|LJGI|TC80014 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 54 2e-06
>gnl|LJGI|TC60153 weakly similar to UniRef100_A2Q3V4 Cluster: Integral membrane protein
DUF6 containing protein; n=1; Medicago truncatula|Rep:
Integral membrane protein DUF6 containing protein -
Medicago truncatula (Barrel medic), partial (38%)
Length = 772
Score = 85.7 bits (43), Expect = 6e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 937 ggaagtgttatcggaggagtgctaattgtgtgtggcttgtacatggtgctttggggtaag 996
|||||||| || |||| |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 276 ggaagtgtaattggagctgtgctaattgtgtgtggcttgtacatggtgctatggggaaag 335
Query: 997 agtaaagaaac 1007
|| ||||||||
Sbjct: 336 agcaaagaaac 346
>gnl|LJGI|TC61995 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 769
Score = 81.8 bits (41), Expect = 1e-14
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 104 taaacgatggaatgagcgttagtgtaatcactgcctatcgcctcatgttcggtgctgctt 163
||||||||||| | ||||| || || |||||||| || || ||||| |||| ||||||
Sbjct: 207 taaacgatggagtaagcgtcagagtcatcactgcttaccgtctcattttcgccactgctt 266
Query: 164 gcactattcttctttctcttatttttgaaagaaagaacaggccaaagctgacatggaggg 223
|||| ||| ||| |||||||| ||||||| || ||||| ||||| ||||| |||||||
Sbjct: 267 gcaccgttccacttgctcttattcttgaaaggaaaaacagaccaaaactgacttggaggg 326
Query: 224 tgcttttcatgacattt 240
||||||||||| |||||
Sbjct: 327 tgcttttcatgtcattt 343
>gnl|LJGI|TC60577 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 795
Score = 63.9 bits (32), Expect = 2e-09
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 616 tggctcatcatccaggctaagattgctaaagaatatccaagacaatacacaagcacggcc 675
||||||||||| ||||||||||| ||||||||||| || || ||||| || || ||
Sbjct: 684 tggctcatcattcaggctaagatgagcaaagaatatccgagtcattacactagtacagct 743
Query: 676 ttgatgaccttaatggcggc 695
||||||||||||||||||||
Sbjct: 744 ttgatgaccttaatggcggc 763
Score = 60.0 bits (30), Expect = 4e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 179 ctcttatttttgaaagaaagaacaggccaaagctgacatggagggtgcttttcatgacat 238
|||||||| ||||||| |||||||| ||||||| || ||||| |||||||||||| |||
Sbjct: 265 ctcttattcttgaaaggaagaacagagcaaagcttacttggagagtgcttttcatgtcat 324
Query: 239 tt 240
||
Sbjct: 325 tt 326
>gnl|LJGI|TC82671 weakly similar to UniRef100_A7QBD0 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 1337
Score = 56.0 bits (28), Expect = 6e-07
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 920 atgagaagatatacttaggaagtgttatcggaggagtgctaattgtgtgtggcttgtaca 979
|||||||| |||| ||||||||||| | |||| | ||| || ||||||||| | ||||
Sbjct: 1006 atgagaagttatatctaggaagtgttcttggagctgggctgatcgtgtgtggcctataca 1065
Query: 980 tggtgctttggggtaagagtaaagaaacaaaaaaga 1015
||||||||||||||||| ||||||| |||||||
Sbjct: 1066 ctgtgctttggggtaagagcaaagaaatgaaaaaga 1101
>gnl|LJGI|TC80014 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 1226
Score = 54.0 bits (27), Expect = 2e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 911 tggttttgaatgagaagatatacttaggaagtgttatcggaggagtgctaattgtgtgtg 970
|||| ||| |||||||| || | ||||| ||||| | ||||||||||| ||| | ||||
Sbjct: 942 tggtgttggatgagaagttaaatttaggcagtgtgcttggaggagtgcttattatttgtg 1001
Query: 971 gcttgtacatggtgctttggggtaagagtaaagaa 1005
|| | |||| |||||||||||||||| | ||||||
Sbjct: 1002 gcctatacacggtgctttggggtaagggcaaagaa 1036