Miyakogusa Predicted Gene
- Lj4g3v0288370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0288370.1 Non Chatacterized Hit- tr|I1K2X4|I1K2X4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52094
PE,76.68,0,FAD-binding domain,FAD-binding, type 2; seg,NULL; FAMILY
NOT NAMED,NULL;
BBE,Berberine/berberine-lik,
gene.Ljchr4_pseudomol_20120830.path1.gene659.1
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74464 similar to UniRef100_A7Q4S9 Cluster: Chromosome... 165 8e-40
gnl|LJGI|TC60320 weakly similar to UniRef100_Q9SVG4 Cluster: Ret... 82 9e-15
gnl|LJGI|TC73054 weakly similar to UniRef100_A7Q4U4 Cluster: Chr... 64 2e-09
gnl|LJGI|TC69424 similar to UniRef100_A7Q4U4 Cluster: Chromosome... 62 8e-09
gnl|LJGI|TC79274 similar to UniRef100_Q2HTY5 Cluster: FAD linked... 54 2e-06
gnl|LJGI|TC60652 similar to UniRef100_A7Q4S5 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC74464 similar to UniRef100_A7Q4S9 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 674
Score = 165 bits (83), Expect = 8e-40
Identities = 140/159 (88%)
Strand = Plus / Plus
Query: 564 caagaggaaatctgattatgtgcagaaaccgatttcgaaagatgggttggaagggatatg 623
|||||||||||||||||||||||||||||| ||||| | ||||||||||||| ||| ||
Sbjct: 118 caagaggaaatctgattatgtgcagaaaccaatttcaagagatgggttggaatcgatttg 177
Query: 624 gacgaagatgattgaattgggaaaaacaggatgtgttttcaatccttatggaggaaaaat 683
|| |||| |||||||||| || ||| ||||| |||||||||||||||||| ||||||||
Sbjct: 178 gaagaagttgattgaattagggaaagtaggatttgttttcaatccttatggtggaaaaat 237
Query: 684 gaatgagatcccatctgaagctaccccatttcctcaccg 722
||||||||| |||||||| || || ||||| ||||||||
Sbjct: 238 gaatgagattccatctgatgcaacaccattccctcaccg 276
Score = 52.0 bits (26), Expect = 8e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 942 caagtacttcaataacaattttgagaggttggtcaagatcaagactgtagttgatcctga 1001
|||||||||| |||||||||||||||| | || ||| | || |||| || |||||||
Sbjct: 493 caagtacttcggtaacaattttgagaggctagtgaaggttaaaactgctgtggatcctgt 552
Query: 1002 aaacttcttcaggaatgaacagagtattcc 1031
||||| ||||||||||| || ||||||||
Sbjct: 553 taactttttcaggaatgagcaaagtattcc 582
>gnl|LJGI|TC60320 weakly similar to UniRef100_Q9SVG4 Cluster: Reticuline oxidase-like
protein precursor; n=1; Arabidopsis thaliana|Rep:
Reticuline oxidase-like protein precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (50%)
Length = 1070
Score = 81.8 bits (41), Expect = 9e-15
Identities = 182/229 (79%)
Strand = Plus / Plus
Query: 103 ttctgggctgttagaggagggggaggagcaagttttggagtcatcttatcattcactgtt 162
||||||||| ||||||| || || |||| || ||||| || || ||||||| ||| |||
Sbjct: 717 ttctgggctattagaggtggtggtggaggtagctttggtgtgattttatcatacacggtt 776
Query: 163 aagttggttccggtaccggagattgtgactgtttttcgggttgcaaagactttagaacag 222
|| ||||| ||| || || ||||| |||||||||||||| | |||||| | || |||
Sbjct: 777 aaactggttaaggttcctgaaattgttactgtttttcgggtggagaagactctggatcag 836
Query: 223 aatgctactgagcttgttttacagtggcagcaggttgcgcctcgcaccgacgataggctt 282
||||||||||| |||||| | || |||||||||||||| || || || || |||||
Sbjct: 837 aatgctactgatcttgttcttcaatggcagcaggttgctccaacaactgatgacaggcta 896
Query: 283 ttcttgaggctgctcttgcagcctgtgagttctaaggttgtgaaaggga 331
||| |||||||| | |||||||| | ||||| ||||||||||| ||||
Sbjct: 897 ttcatgaggctgttgttgcagccaattagttccaaggttgtgaagggga 945
>gnl|LJGI|TC73054 weakly similar to UniRef100_A7Q4U4 Cluster: Chromosome chr10
scaffold_50, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_50, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (34%)
Length = 732
Score = 63.9 bits (32), Expect = 2e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 568 aggaaatctgattatgtgcagaaaccgatttcgaaagatgggttggaagggatatggacg 627
|||||||| ||||||||| ||||||| ||||| || || || ||||||||||| ||||
Sbjct: 55 aggaaatcagattatgtgaagaaaccaatttccaaggagggtttggaagggatttggaac 114
Query: 628 aagatgattgaattgg 643
||||||||||| ||||
Sbjct: 115 aagatgattgagttgg 130
>gnl|LJGI|TC69424 similar to UniRef100_A7Q4U4 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 894
Score = 61.9 bits (31), Expect = 8e-09
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 565 aagaggaaatctgattatgtgcagaaaccgatttcgaaagatgggttggaagggatatgg 624
|||||||||||||| |||||| ||||||| ||||| || || || | ||||||||| |||
Sbjct: 36 aagaggaaatctgactatgtgaagaaaccaatttccaaggagggttgggaagggatttgg 95
Query: 625 acgaagatgattgaattgg 643
| ||||||||||| ||||
Sbjct: 96 aacaagatgattgagttgg 114
>gnl|LJGI|TC79274 similar to UniRef100_Q2HTY5 Cluster: FAD linked oxidase,
N-terminal; n=1; Medicago truncatula|Rep: FAD linked
oxidase, N-terminal - Medicago truncatula (Barrel
medic), partial (71%)
Length = 1252
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 37 attgatgcaagaattgttgatgtcaatggtaggattcttgata 79
|||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 272 attgatgcaaaacttgttgatgtcaatggtaaaattcttgata 314
>gnl|LJGI|TC60652 similar to UniRef100_A7Q4S5 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 765
Score = 54.0 bits (27), Expect = 2e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 48 aattgttgatgtcaatggtaggattcttgataagaatgccatgggggaggaccttttctg 107
||||||||||| |||||| || |||||||| | | | ||||||||||| || ||||| ||
Sbjct: 656 aattgttgatgccaatggcagaattcttgacagggaagccatgggggaagagcttttttg 715
Query: 108 ggctgttagaggagg 122
|||| | ||||||||
Sbjct: 716 ggctatcagaggagg 730