Miyakogusa Predicted Gene

Lj4g3v0254410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0254410.2 tr|A8ISC5|A8ISC5_CHLRE Trehalose-6-phosphate
synthase/phosphatase OS=Chlamydomonas reinhardtii
GN=TP,52.87,3e-19,seg,NULL;
Trehalose_PPase,Trehalose-phosphatase,CUFF.46775.2
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0034s0170.1 | trehalose-6-phosphate synthase | HC | scaffol...   170   6e-43
Medtr2g073260.1 | trehalose-6-phosphate synthase | HC | chr2:310...   169   1e-42
Medtr8g087930.1 | trehalose-6-phosphate synthase | HC | chr8:363...   154   3e-38

>Medtr0034s0170.1 | trehalose-6-phosphate synthase | HC |
           scaffold0034:94476-84414 | 20130731
          Length = 929

 Score =  170 bits (430), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 81/105 (77%), Positives = 89/105 (84%)

Query: 57  DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
           DVEFG+LQA+DMLQHL TG ISN+S+EV QGSRS+EVRA GVTKGAAIDRILGEIVHSKS
Sbjct: 715 DVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKS 774

Query: 117 MTIPIDCVLSIGHFLAKDEDIYAFFEPELPCVGVGLPRGKVTDAA 161
           MT PID VL IGHFL KDED+Y FFEP+LP +GV LP  K T  A
Sbjct: 775 MTSPIDYVLCIGHFLGKDEDLYTFFEPDLPSIGVSLPGSKATTEA 819


>Medtr2g073260.1 | trehalose-6-phosphate synthase | HC |
           chr2:31040510-31030551 | 20130731
          Length = 963

 Score =  169 bits (428), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/106 (79%), Positives = 90/106 (84%), Gaps = 1/106 (0%)

Query: 57  DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
           DVEFG+LQA+DMLQHL TG ISNAS+EV QGSRS+EVRAAGVTKGAAIDRILGEIVHSKS
Sbjct: 752 DVEFGKLQARDMLQHLCTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKS 811

Query: 117 MTIPIDCVLSIGHFLAK-DEDIYAFFEPELPCVGVGLPRGKVTDAA 161
           MT PID VL IGHFLAK DEDIY FFEPE    G  L R K++DAA
Sbjct: 812 MTTPIDYVLCIGHFLAKQDEDIYDFFEPEPSSFGASLQRSKLSDAA 857


>Medtr8g087930.1 | trehalose-6-phosphate synthase | HC |
           chr8:36380019-36383777 | 20130731
          Length = 527

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 79/91 (86%)

Query: 57  DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
           DVEFGRLQA+D+LQHL TG ISNASL+V QG RS+EVRA GV+KGAAIDRILGEIVHSK 
Sbjct: 319 DVEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIVHSKG 378

Query: 117 MTIPIDCVLSIGHFLAKDEDIYAFFEPELPC 147
           M  PID VL IGHFLAKDED+Y FFEPELP 
Sbjct: 379 MKEPIDYVLCIGHFLAKDEDVYKFFEPELPS 409