Miyakogusa Predicted Gene
- Lj4g3v0254410.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0254410.2 tr|A8ISC5|A8ISC5_CHLRE Trehalose-6-phosphate
synthase/phosphatase OS=Chlamydomonas reinhardtii
GN=TP,52.87,3e-19,seg,NULL;
Trehalose_PPase,Trehalose-phosphatase,CUFF.46775.2
(161 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G78580.1 | Symbols: ATTPS1, TPS1 | trehalose-6-phosphate synt... 161 2e-40
AT4G27550.1 | Symbols: ATTPS4, TPS4 | trehalose-6-phosphatase sy... 132 1e-31
AT1G16980.1 | Symbols: ATTPS2, TPS2 | trehalose-phosphatase/synt... 123 5e-29
AT1G17000.1 | Symbols: ATTPS3, TPS3 | trehalose-phosphatase/synt... 116 5e-27
AT1G06410.1 | Symbols: ATTPS7, TPS7, ATTPSA | trehalose-phosphat... 49 1e-06
AT1G23870.1 | Symbols: ATTPS9, TPS9 | trehalose-phosphatase/synt... 49 2e-06
AT1G70290.1 | Symbols: ATTPS8, TPS8, ATTPSC | trehalose-6-phosph... 47 4e-06
>AT1G78580.1 | Symbols: ATTPS1, TPS1 | trehalose-6-phosphate
synthase | chr1:29552495-29557482 REVERSE LENGTH=942
Length = 942
Score = 161 bits (407), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/90 (82%), Positives = 81/90 (90%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
D+EFGRLQA+D+LQHL TG ISNAS++V QGSRS+EVRA GVTKGAAIDRILGEIVHSKS
Sbjct: 724 DIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKS 783
Query: 117 MTIPIDCVLSIGHFLAKDEDIYAFFEPELP 146
MT PID VL IGHFL KDED+Y FFEPELP
Sbjct: 784 MTTPIDYVLCIGHFLGKDEDVYTFFEPELP 813
>AT4G27550.1 | Symbols: ATTPS4, TPS4 | trehalose-6-phosphatase
synthase S4 | chr4:13755689-13759740 FORWARD LENGTH=795
Length = 795
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 73/89 (82%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
D EFGR QA+DMLQHL G ISNAS++V +G +S+EV A GVTKG+A++RILGEIVH+KS
Sbjct: 642 DAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKS 701
Query: 117 MTIPIDCVLSIGHFLAKDEDIYAFFEPEL 145
M PID VL IG FL KDED+Y FFEPEL
Sbjct: 702 MATPIDYVLCIGCFLGKDEDVYTFFEPEL 730
>AT1G16980.1 | Symbols: ATTPS2, TPS2 |
trehalose-phosphatase/synthase 2 | chr1:5807311-5811488
FORWARD LENGTH=821
Length = 821
Score = 123 bits (309), Expect = 5e-29, Method: Composition-based stats.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
DVEFGR QA+D+LQ+L G ISNAS++V +G+ S+EV A G TKGAAI RILGEIVH KS
Sbjct: 637 DVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKS 696
Query: 117 MTIPIDCVLSIGHFLAKDEDIYAFFEPEL 145
MT PID V G+FL KDEDIY FFE ++
Sbjct: 697 MTTPIDFVFCSGYFLEKDEDIYTFFESKI 725
>AT1G17000.1 | Symbols: ATTPS3, TPS3 |
trehalose-phosphatase/synthase 3 | chr1:5812728-5816662
FORWARD LENGTH=783
Length = 783
Score = 116 bits (291), Expect = 5e-27, Method: Composition-based stats.
Identities = 57/89 (64%), Positives = 65/89 (73%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
DVEFGR QA+D+LQ+L G ISNAS EV +G S+EV A GVTK I ILGEIVH K+
Sbjct: 615 DVEFGRAQARDLLQYLWAGPISNASAEVVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKA 674
Query: 117 MTIPIDCVLSIGHFLAKDEDIYAFFEPEL 145
MT PID V G+FL KDEDIY FFE E+
Sbjct: 675 MTTPIDYVFCSGYFLEKDEDIYTFFESEI 703
>AT1G06410.1 | Symbols: ATTPS7, TPS7, ATTPSA |
trehalose-phosphatase/synthase 7 | chr1:1955413-1958153
FORWARD LENGTH=851
Length = 851
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
D FG LQAK+ML+HL + ++N + V G +EV+ GV+KG+ ++I +
Sbjct: 710 DPGFGSLQAKEMLEHLES-VLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGK 768
Query: 117 MTIPIDCVLSIGHFLAKDEDIY 138
P+D VL IG + DED++
Sbjct: 769 ---PVDFVLCIGDDRS-DEDMF 786
>AT1G23870.1 | Symbols: ATTPS9, TPS9 |
trehalose-phosphatase/synthase 9 | chr1:8432695-8435506
FORWARD LENGTH=867
Length = 867
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
D +FG QAK++L HL + ++N + V +G +EV+ GV+KG A+++++ ++V +
Sbjct: 716 DPDFGACQAKELLDHLES-VLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGN 774
Query: 117 MTIPIDCVLSIGHFLAKDEDIY-----AFFEPELP 146
P D V+ IG + DED++ P+LP
Sbjct: 775 ---PPDMVMCIGDDRS-DEDMFESILSTVTNPDLP 805
>AT1G70290.1 | Symbols: ATTPS8, TPS8, ATTPSC |
trehalose-6-phosphatase synthase S8 |
chr1:26471286-26474078 REVERSE LENGTH=856
Length = 856
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 57 DVEFGRLQAKDMLQHLSTGSISNASLEVFQGSRSIEVRAAGVTKGAAIDRILGEIVHSKS 116
D +FG QAK+ML HL + ++N + V +G +EV+ GV+KG A ++++ E+V
Sbjct: 711 DPDFGSCQAKEMLDHLES-VLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGE 769
Query: 117 MTIPIDCVLSIGHFLAKDEDIY 138
P + V+ IG + DED++
Sbjct: 770 ---PPEMVMCIGDDRS-DEDMF 787